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1.
Food Chem ; 462: 140974, 2025 Jan 01.
Article in English | MEDLINE | ID: mdl-39197239

ABSTRACT

Total starch granule-associated proteins (tGAP), including granule-channel (GCP) and granule-surface proteins (GSP), alter the physicochemical properties of starches. Quinoa starch (QS) acts as an effective emulsifier in Pickering emulsion. However, the correlation between the tGAP and the emulsifying capacity of QS at different scales remains unclear. Herein, GCP and tGAP were selectively removed from QS, namely QS-C and QS-A. Results indicated that the loss of tGAP increased the water permeability and hydrophilicity of the starch particles. Mesoscopically, removing tGAP decreased the diffusion rate and interfacial viscous modulus. Particularly, GSP had a more profound impact on the interfacial modulus than GCP. Microscopically and macroscopically, the loss of tGAP endowed QS with weakened emulsifying ability in terms of emulsions with larger droplet size and diminished rheological properties. Collectively, this work demonstrated that tGAP played an important role in the structural and interfacial properties of QS molecules and the stability of QS-stabilized emulsions.


Subject(s)
Chenopodium quinoa , Emulsifying Agents , Emulsions , Hydrophobic and Hydrophilic Interactions , Plant Proteins , Starch , Chenopodium quinoa/chemistry , Starch/chemistry , Emulsions/chemistry , Emulsifying Agents/chemistry , Plant Proteins/chemistry , Particle Size , Rheology
2.
Food Chem ; 462: 141033, 2025 Jan 01.
Article in English | MEDLINE | ID: mdl-39217750

ABSTRACT

A rapid method was developed for determining the total flavonoid and protein content in Tartary buckwheat by employing near-infrared spectroscopy (NIRS) and various machine learning algorithms, including partial least squares regression (PLSR), support vector regression (SVR), and backpropagation neural network (BPNN). The RAW-SPA-CV-SVR model exhibited superior predictive accuracy for both Tartary and common buckwheat, with a high coefficient of determination (R2p = 0.9811) and a root mean squared error of prediction (RMSEP = 0.1071) for flavonoids, outperforming both PLSR and BPNN models. Additionally, the MMN-SPA-PSO-SVR model demonstrated exceptional performance in predicting protein content (R2p = 0.9247, RMSEP = 0.3906), enhancing the effectiveness of the MMN preprocessing technique for preserving the original data distribution. These findings indicate that the proposed methodology could efficiently assess buckwheat adulteration analysis. It can also provide new insights for the development of a promising method for quantifying food adulteration and controlling food quality.


Subject(s)
Fagopyrum , Flavonoids , Plant Proteins , Spectroscopy, Near-Infrared , Fagopyrum/chemistry , Spectroscopy, Near-Infrared/methods , Flavonoids/analysis , Flavonoids/chemistry , Plant Proteins/analysis , Plant Proteins/chemistry , Chemometrics/methods , Least-Squares Analysis , Neural Networks, Computer
3.
Protein Expr Purif ; 225: 106597, 2025 Jan.
Article in English | MEDLINE | ID: mdl-39233018

ABSTRACT

A trypsin affinity material was prepared by covalently immobilizing buckwheat trypsin inhibitor (BTI) on epichlorohydrin-activated cross-linked agarose gel (Selfinose CL 6 B). The optimal conditions for activating Selfinose CL 6 B were 15 % epichlorohydrin and 0.8 M NaOH at 40 °C for 2 h. The optimal pH for immobilizing BTI was 9.5. BTI-Sefinose CL 6 B showed a maximum adsorption capacity of 2.25 mg trypsin/(g support). The material also displayed good reusability, retaining over 90 % of its initial adsorption capacity after 30 cycles. High-purity trypsin was obtained from locust homogenate using BTI-Selfinose CL 6 B through one-step affinity chromatography. The molecular mass and Km value of locust trypsin were determined as 27 kDa and 0.241 mM using N-benzoyl-DL-arginine-nitroanilide as substrate. The optimal temperature and pH of trypsin activity were 55 °C and 9.0, respectively. The enzyme exhibited good stability in the temperature range of 30-50 °C and pH range of 4.0-10.0. BTI-Selfinose CL 6 B demonstrates potential application in the preparation of high-purity trypsin and the discovery of more novel trypsin from various species.


Subject(s)
Chromatography, Affinity , Recombinant Proteins , Trypsin Inhibitors , Trypsin , Trypsin/chemistry , Trypsin/metabolism , Trypsin Inhibitors/chemistry , Trypsin Inhibitors/isolation & purification , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Chromatography, Affinity/methods , Plant Proteins/isolation & purification , Plant Proteins/chemistry , Hydrogen-Ion Concentration , Fagopyrum/chemistry , Temperature , Sepharose/chemistry , Enzyme Stability
4.
Elife ; 122024 Sep 17.
Article in English | MEDLINE | ID: mdl-39287621

ABSTRACT

Ethylamine (EA), the precursor of theanine biosynthesis, is synthesized from alanine decarboxylation by alanine decarboxylase (AlaDC) in tea plants. AlaDC evolves from serine decarboxylase (SerDC) through neofunctionalization and has lower catalytic activity. However, lacking structure information hinders the understanding of the evolution of substrate specificity and catalytic activity. In this study, we solved the X-ray crystal structures of AlaDC from Camellia sinensis (CsAlaDC) and SerDC from Arabidopsis thaliana (AtSerDC). Tyr341 of AtSerDC or the corresponding Tyr336 of CsAlaDC is essential for their enzymatic activity. Tyr111 of AtSerDC and the corresponding Phe106 of CsAlaDC determine their substrate specificity. Both CsAlaDC and AtSerDC have a distinctive zinc finger and have not been identified in any other Group II PLP-dependent amino acid decarboxylases. Based on the structural comparisons, we conducted a mutation screen of CsAlaDC. The results indicated that the mutation of L110F or P114A in the CsAlaDC dimerization interface significantly improved the catalytic activity by 110% and 59%, respectively. Combining a double mutant of CsAlaDCL110F/P114A with theanine synthetase increased theanine production 672% in an in vitro system. This study provides the structural basis for the substrate selectivity and catalytic activity of CsAlaDC and AtSerDC and provides a route to more efficient biosynthesis of theanine.


Subject(s)
Arabidopsis , Camellia sinensis , Carboxy-Lyases , Glutamates , Carboxy-Lyases/genetics , Carboxy-Lyases/metabolism , Carboxy-Lyases/chemistry , Arabidopsis/genetics , Arabidopsis/enzymology , Arabidopsis/metabolism , Crystallography, X-Ray , Substrate Specificity , Glutamates/metabolism , Glutamates/biosynthesis , Glutamates/chemistry , Camellia sinensis/genetics , Camellia sinensis/enzymology , Camellia sinensis/metabolism , Evolution, Molecular , Protein Conformation , Models, Molecular , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Proteins/chemistry , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/chemistry
5.
Zhongguo Zhong Yao Za Zhi ; 49(15): 4007-4014, 2024 Aug.
Article in Chinese | MEDLINE | ID: mdl-39307735

ABSTRACT

To investigate the influence of the strigolactone inhibitor Tis108 on the growth of Gastrodia elata, this study treated G. elata tuber with Tis108 solution of 10 µmol·L~(-1) and measured the content of endogenous hormone gibberellin(GA) in the tuber. By using reverse transcription-polymerase chain reaction(RT-PCR) technology, the key enzyme GeCYP714A1 gene involved in GA deactivation was cloned. Bioinformatics analysis on the GeCYP714A1 gene was carried out by using ExPASy, SWISS-MODEL, MEGA, etc., and its expression levels in different parts of G. elata were determined. The results showed that after Tis108 treatment, GA content in G. elata tuber was significantly increased, and the transcription level of the GeCYP714A1 gene was significantly decreased. The full length of the coding region of the GeCYP714A1 gene is 1 173 bp, encoding 390 amino acids. The protein has a molecular weight of 44.85 kDa, a theoretical isoelectric point of 9.83, an instability index of 49.20, an aliphatic index of 89.03, and a grand average of hydropathicity of-0.235, classifying it as an unstable, basic, hydrophilic protein, and the GeCYP714A1 protein was localized in the mitochondria, lacking a signal peptide and a transmembrane structure. Phylogenetic tree analysis revealed that GeCYP714A1 was most closely related to the DcCYP714C2(PKU78454.1) protein from Dendrobium candidum, with a sequence identity of 67.25%. The qRT-PCR analysis of the expression patterns of the GeCYP714A1 gene indicated that GeCYP714A1 had the highest transcription level in G. elata tuber, followed by stem and inflorescence. The study represented that Tis108 inhibited the transcription level of GeCYP714A1 involved in GA deactivation in G. elata tuber, thereby increasing the accumulation of GA and affecting the growth of G. elata tuber. These results provided a basis for further studies of strigolactone regulation of GA signal and tuber development in G. elata.


Subject(s)
Gastrodia , Gibberellins , Plant Proteins , Gastrodia/genetics , Gastrodia/chemistry , Gibberellins/pharmacology , Gibberellins/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Proteins/chemistry , Gene Expression Regulation, Plant/drug effects , Lactones/pharmacology , Phylogeny , Amino Acid Sequence
6.
Zhongguo Zhong Yao Za Zhi ; 49(16): 4387-4395, 2024 Aug.
Article in Chinese | MEDLINE | ID: mdl-39307775

ABSTRACT

Aconitum vilmorinianum is an authentic and superior medicinal herbal in Yunnan, which is rich in yunaconitine and other diterpene alkaloids. Diterpene alkaloids are its main active components. Farnesyl pyrophosphate synthase(FPS) is a key enzyme in the terpene biosynthetic pathway and plays an important role in diterpene alkaloid biosynthesis. Functional studies of FPS help to reveal the molecular mechanism of diterpene alkaloid biosynthesis. In this study, one FPS gene(AvFPS) was selected based on the transcriptome data of A. vilmorinianum. Its full-length sequence was cloned, and bioinformatic analysis, functional verification, and gene expression analysis were performed. The open reading frame(ORF) of AvFPS was 1 056 bp, encoding 351 amino acids. Its molecular weight was 41 kDa. AvFPS had two typical conserved functional domains of isopentenyl transferase, " DDIMD" and " DDYXD". The recombinant protein of AvFPS was expressed in Escherichia coli, and purified recombinant protein was used for in vitro enzymatic reaction. The results revealed that AvFPS was able to catalyze the synthesis of farnesyl pyrophosphate(FPP). The results of qRT-PCR analysis showed that AvFPS was expressed in the roots, stems, leaves, and flowers of A. vilmorinianum, with the highest expression level in the roots. The expression level of AvFPS was significantly up-regulated by MeJA induction. This study clarified the catalytic function of AvFPS, revealed the expression pattern of AvFPS in different tissue, as well as at different time induced by MeJA, and provided a reference for a deeper understanding of the function of FPS in the biosynthesis of diterpenoid components.


Subject(s)
Aconitum , Cloning, Molecular , Geranyltranstransferase , Plant Proteins , Geranyltranstransferase/genetics , Geranyltranstransferase/metabolism , Geranyltranstransferase/chemistry , Aconitum/genetics , Aconitum/enzymology , Aconitum/chemistry , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Proteins/chemistry , Gene Expression Regulation, Plant , Amino Acid Sequence , Phylogeny , Sequence Alignment
7.
Pestic Biochem Physiol ; 204: 106070, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39277385

ABSTRACT

Resistance to ALS-inhibiting herbicides has dramatically increased worldwide due to the persisting evolution of target site mutations that reduce the affinity between the herbicide and the target. We evaluated the effect of the well-known ALS Asp-376-Glu target site mutation on different imidazolinone herbicides, including imazamox and imazethapyr. Greenhouse dose response experiments indicate that the Amaranthus retroflexus biotype carrying Asp-376-Glu was fully controlled by applying the field recommended dose of imazamox, whereas it displayed high level of resistance to imazethapyr. Likewise, Sorghum halepense, carrying Asp-376-Glu showed resistance to field recommended doses of imazethapyr but not of imazamox. Biochemical inhibition and kinetic characterization of the Asp-376-Glu mutant enzyme heterologously expressed using different plant sequence backbones, indicate that the Asp-376-Glu shows high level of insensitivity to imazethapyr but not to imazamox, corroborating the greenhouse results. Docking simulations revealed that imazamox can still inhibit the Asp-376-Glu mutant enzyme through a chalcogen interaction between the oxygen of the ligand and the sulfur atom of the ALS Met200, while imazethapyr does not create such interaction. These results explain the different sensitivity of the Asp-376-Glu mutation towards imidazolinone herbicides, thus providing novel information that can be exploited for defining stewardship guidelines to manage fields infested by weeds harboring the Asp-376-Glu mutation.


Subject(s)
Acetolactate Synthase , Amaranthus , Herbicide Resistance , Herbicides , Imidazoles , Point Mutation , Acetolactate Synthase/genetics , Acetolactate Synthase/metabolism , Acetolactate Synthase/chemistry , Herbicides/pharmacology , Herbicides/chemistry , Herbicide Resistance/genetics , Imidazoles/pharmacology , Imidazoles/chemistry , Amaranthus/drug effects , Amaranthus/genetics , Sorghum/genetics , Sorghum/drug effects , Molecular Docking Simulation , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Proteins/chemistry , Nicotinic Acids/pharmacology , Niacin/analogs & derivatives
8.
Molecules ; 29(18)2024 Sep 13.
Article in English | MEDLINE | ID: mdl-39339338

ABSTRACT

Cyclotides are plant cyclic peptides with exceptional stability and diverse bioactivity, making them promising candidates for biomedical applications. Therefore, the study of cyclotides has attracted increasing attention in recent years. However, the existing cyclotide detection methods face limitations in sensitivity, accuracy, and reliability. To address these challenges, we developed an integrated strategy using a combination of strong cation exchange chromatography techniques for removing interfering small molecules, Orbitrap Exploris 480 mass spectrometry (OEMS); this is a detection and database searching-based method for cyclotide verification, which greatly improved the sensitivity, accuracy, and reliability of cyclotide identification. This strategy was subsequently employed for cyclotide mapping in Viola with a minute amount of starting tissue, resulting the identification of 65 known and 18 potentially novel cyclotides, which is the largest dataset of cyclotides for Viola philippica. This strategy provided valuable insights into the cyclotide diversity and distribution in V. philippica, with potential applications in drug discovery and other biomedical fields.


Subject(s)
Cyclotides , Viola , Cyclotides/chemistry , Cyclotides/analysis , Cyclotides/isolation & purification , Viola/chemistry , Mass Spectrometry/methods , Amino Acid Sequence , Tandem Mass Spectrometry/methods , Plant Proteins/analysis , Plant Proteins/chemistry
9.
Carbohydr Polym ; 345: 122561, 2024 Dec 01.
Article in English | MEDLINE | ID: mdl-39227100

ABSTRACT

The digestibility of starch is affected by amylose content, and increasing amylopectin chain length which can be manipulated by alterations to genes encoding starch-branching enzymes (SBEs). We investigated the impact of Cas9-mediated mutagenesis of SBEs in potato on starch structural properties and digestibility. Four potato starches with edited SBE genes were tested. One lacked SBE1 and SBE2, two lacked SBE2 and had reduced SBE1, and one had reduced SBE2 only. Starch structure and thermal properties were characterised by DSC and XRD. The impact of different thermal treatments on digestibility was studied using an in vitro digestion protocol. All native potato starches were resistant to digestion, and all gelatinised starches were highly digestible. SBE modified starches had higher gelatinisation temperatures than wild type potatoes and retrograded more rapidly. Gelatinisation and 18 h of retrogradation, increased gelatinisation enthalpy, but this did not translate to differences in digestion. Following 7 days of retrogradation, starch from three modified SBE starch lines was less digestible than starch from wild-type potatoes, likely due to the recrystallisation of the long amylopectin chains. Our results indicate that reductions in SBE in potato may be beneficial to health by increasing the amount of fibre reaching the colon after retrogradation.


Subject(s)
1,4-alpha-Glucan Branching Enzyme , Mutagenesis , Solanum tuberosum , Starch , Solanum tuberosum/genetics , Solanum tuberosum/chemistry , 1,4-alpha-Glucan Branching Enzyme/genetics , 1,4-alpha-Glucan Branching Enzyme/metabolism , 1,4-alpha-Glucan Branching Enzyme/chemistry , Starch/chemistry , Starch/metabolism , Digestion , CRISPR-Cas Systems/genetics , Amylopectin/chemistry , Amylopectin/metabolism , Amylose/chemistry , Amylose/metabolism , Plant Proteins/genetics , Plant Proteins/chemistry , Plant Proteins/metabolism
10.
Compr Rev Food Sci Food Saf ; 23(5): e70007, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39223759

ABSTRACT

The potato has recently attracted more attention as a promising protein source. Potato proteins are commonly extracted from potato fruit juice, a byproduct of starch production. Potato proteins are characterized by superior techno-functional properties, such as water solubility, gel-forming, emulsifying, and foaming properties. However, commercially isolated potato proteins are often denatured, leading to a loss of these functionalities. Extensive research has explored the influence of different conditions and techniques on the emulsifying capacity and stability of potato proteins. However, there has been no comprehensive review of this topic yet. This paper aims to provide an in-depth overview of current research progress on the emulsifying capacity and stability of potato proteins and peptides, discussing research challenges and future perspectives. This paper discusses genetic diversity in potato proteins and various methods for extracting proteins from potatoes, including thermal and acid precipitation, salt precipitation, organic solvent precipitation, carboxymethyl cellulose complexation, chromatography, and membrane technology. It also covers enzymatic hydrolysis for producing potato-derived peptides and methods for identifying potato protein-derived emulsifying peptides. Furthermore, it reviews the influence of factors, such as physicochemical properties, environmental conditions, and food-processing techniques on the emulsifying capacity and stability of potato proteins and their derived peptides. Finally, it highlights chemical modifications, such as acylation, succinylation, phosphorylation, and glycation to enhance emulsifying capacity and stability. This review provides insight into future research directions for utilizing potato proteins as sustainable protein sources and high-value food emulsifiers, thereby contributing to adding value to the potato processing industry.


Subject(s)
Peptides , Plant Proteins , Solanum tuberosum , Solanum tuberosum/chemistry , Plant Proteins/chemistry , Peptides/chemistry , Emulsifying Agents/chemistry , Emulsions/chemistry , Food Handling/methods , Protein Stability
11.
J Agric Food Chem ; 72(37): 20527-20536, 2024 Sep 18.
Article in English | MEDLINE | ID: mdl-39231371

ABSTRACT

This study aimed to test the hypothesis that bioactive peptides can exert multiple bioactivities at different sites in the gastrointestinal tract. Our previous research identified 33 gastric-resistant peptides derived from wheat germ with potential antiadhesive activity against Helicobacter pylori in the stomach. In this work, in silico digestion of these peptides with trypsin, thermolysin, and chymotrypsin produced 67 peptide fragments. Molecular docking was conducted to predict their ACE and DPP-IV inhibitory activities in the small intestine. Three peptides (VPIPNPSGDR, VPY, and AR) were selected and synthesized for in vitro validation. Their generation in the gastrointestinal tract was verified via in vitro digestion, followed by mass spectrometry analysis. The IC50 values for ACE inhibition were 199.5 µM (VPIPNPSGDR), 316.3 µM (VPY), and 446.7 µM (AR). For DPP-IV inhibition, their IC50 values were 0.5, 1.6, and 4.0 mM, respectively. This research pioneers new directions in the emerging field of multifunctional peptides, providing scientific evidence to support the utilization of wheat germ as value-added food ingredients.


Subject(s)
Intestine, Small , Molecular Docking Simulation , Peptides , Plant Proteins , Triticum , Triticum/chemistry , Peptides/chemistry , Peptides/pharmacology , Intestine, Small/metabolism , Plant Proteins/chemistry , Plant Proteins/metabolism , Plant Proteins/pharmacology , Humans , Dipeptidyl-Peptidase IV Inhibitors/chemistry , Dipeptidyl-Peptidase IV Inhibitors/pharmacology , Digestion , Angiotensin-Converting Enzyme Inhibitors/chemistry , Angiotensin-Converting Enzyme Inhibitors/pharmacology , Angiotensin-Converting Enzyme Inhibitors/metabolism , Stomach/chemistry , Dipeptidyl Peptidase 4/chemistry , Dipeptidyl Peptidase 4/metabolism , Peptidyl-Dipeptidase A/chemistry , Peptidyl-Dipeptidase A/metabolism , Computer Simulation , Gastric Mucosa/metabolism , Seeds/chemistry
12.
Biochemistry (Mosc) ; 89(8): 1519-1530, 2024 Aug.
Article in English | MEDLINE | ID: mdl-39245459

ABSTRACT

The lipoxygenase cascade in plants is a source of oxylipins (oxidized fatty acid derivatives), which play an important role in regulatory processes and formation of plant response to stress factors. Some of the most common enzymes of the lipoxygenase cascade are 13-specific hydroperoxide lyases (HPLs, also called hemiacetal synthases) of the CYP74B subfamily. In this work, we identified and cloned the CYP74B34 gene from carrot (Daucus carota L.) and described the biochemical properties of the corresponding recombinant enzyme. The CYP74B34 enzyme was active towards 9- and 13-hydroperoxides of linoleic (9-HPOD and 13-HPOD, respectively) and α-linolenic (9-HPOT and 13-HPOT, respectively) acids. CYP74B34 specifically converted 9-HPOT and 13-HPOT into aldo acids (HPL products). The transformation of 13-HPOD led to the formation of aldo acids and epoxyalcohols [products of epoxyalcohol synthase (EAS) activity] as major and minor products, respectively. At the same time, conversion of 9-HPOD resulted in the formation of epoxyalcohols as the main products and aldo acids as the minor ones. Therefore, CYP74B34 is the first enzyme with a double HPL/EAS activity described in carrot. The presence of these catalytic activities was confirmed by analysis of the oxylipin profiles for the roots from young seedlings and mature plants. In addition, we substituted amino acid residues in one of the catalytically essential sites of the CYP74B34 and CYP74B33 proteins and investigated the properties of the obtained mutant enzymes.


Subject(s)
Aldehyde-Lyases , Cytochrome P-450 Enzyme System , Daucus carota , Plant Proteins , Daucus carota/enzymology , Daucus carota/genetics , Daucus carota/metabolism , Aldehyde-Lyases/metabolism , Aldehyde-Lyases/genetics , Aldehyde-Lyases/chemistry , Cytochrome P-450 Enzyme System/metabolism , Cytochrome P-450 Enzyme System/genetics , Cytochrome P-450 Enzyme System/chemistry , Plant Proteins/metabolism , Plant Proteins/genetics , Plant Proteins/chemistry , Recombinant Proteins/metabolism , Recombinant Proteins/genetics , Recombinant Proteins/chemistry , Lipid Peroxides/metabolism , Substrate Specificity , Amino Acid Sequence , Linoleic Acids
13.
Int J Mol Sci ; 25(17)2024 Aug 27.
Article in English | MEDLINE | ID: mdl-39273238

ABSTRACT

Amidst increasing awareness of diet-health relationships, plant-derived bioactive peptides are recognized for their dual nutritional and health benefits. This study investigates bioactive peptides released after Alcalase hydrolysis of protein from chachafruto (Erythrina edulis), a nutrient-rich South American leguminous plant, focusing on their behavior during simulated gastrointestinal digestion. Evaluating their ability to scavenge radicals, mitigate oxidative stress, and influence immune response biomarkers, this study underscores the importance of understanding peptide interactions in digestion. The greatest contribution to the antioxidant activity was exerted by the low molecular weight peptides with ORAC values for the <3 kDa fraction of HES, GD-HES, and GID-HES of 0.74 ± 0.03, 0.72 ± 0.004, and 0.56 ± 0.01 (µmol TE/mg protein, respectively). GD-HES and GID-HES exhibited immunomodulatory effects, promoting the release of NO up to 18.52 and 8.58 µM, respectively. The findings of this study highlighted the potential of chachafruto bioactive peptides in functional foods and nutraceuticals, supporting human health through dietary interventions.


Subject(s)
Antioxidants , Digestion , Erythrina , Peptides , Plant Proteins , Hydrolysis , Plant Proteins/metabolism , Plant Proteins/chemistry , Peptides/chemistry , Peptides/metabolism , Erythrina/chemistry , Antioxidants/pharmacology , Antioxidants/chemistry , Antioxidants/metabolism , Humans , Subtilisins/metabolism , Subtilisins/chemistry , Oxidative Stress , Gastrointestinal Tract/metabolism
14.
Int J Mol Sci ; 25(17)2024 Sep 03.
Article in English | MEDLINE | ID: mdl-39273500

ABSTRACT

Fungi infection, especially derived from Plasmopara viticola, causes severe grapevine economic losses worldwide. Despite the availability of chemical treatments, looking for eco-friendly ways to control Vitis vinifera infection is gaining much more attention. When a plant is infected, multiple disease-control molecular mechanisms are activated. PRRs (Pattern Recognition Receptors) and particularly RLKs (receptor-like kinases) take part in the first barrier of the immune system, and, as a consequence, the kinase signaling cascade is activated, resulting in an immune response. In this context, discovering new lectin-RLK (LecRLK) membrane-bounded proteins has emerged as a promising strategy. The genome-wide localization of potential LecRLKs involved in disease defense was reported in two grapevine varieties of great economic impact: Chardonnay and Pinot Noir. A total of 23 potential amino acid sequences were identified, exhibiting high-sequence homology and evolution related to tandem events. Based on the domain architecture, a carbohydrate specificity ligand assay was conducted with docking, revealing two sequences as candidates for specific Vitis vinifera-Plasmopara viticola host-pathogen interaction. This study confers a starting point for designing new effective antifungal treatments directed at LecRLK targets in Vitis vinifera.


Subject(s)
Oomycetes , Phylogeny , Plant Diseases , Plant Proteins , Vitis , Vitis/genetics , Vitis/microbiology , Vitis/metabolism , Plant Diseases/microbiology , Plant Diseases/genetics , Plant Proteins/genetics , Plant Proteins/chemistry , Plant Proteins/metabolism , Receptors, Pattern Recognition/metabolism , Receptors, Pattern Recognition/genetics , Receptors, Pattern Recognition/chemistry , Host-Pathogen Interactions/genetics , Amino Acid Sequence , Molecular Docking Simulation , Computer Simulation
15.
Molecules ; 29(17)2024 Aug 26.
Article in English | MEDLINE | ID: mdl-39274875

ABSTRACT

The recovery of valuable nutritional compounds, like proteins, from waste streams and by-products is a key strategy for enhancing production sustainability and opening up new market potential. This research aimed to use high-intensity ultrasound as an innovative technique to extract the soluble proteins from the pumpkin leaves. The impact of various sonication amplitudes and duration periods on protein yield, functional properties, antioxidant qualities, and structural characteristics, were studied. Utilization of ultrasound technology significantly increased the yield of pumpkin leaf protein by up to 40%-six times higher than maceration. The ultrasound extraction provided a RuBisCO-rich protein fraction with high radical scavenging and chelating activities, especially at 40% amplitude. Cavitation modified the tertiary and secondary structures of leaf proteins: the amount of α-helix changed based on amplitude (12.3-37.7%), the amount of random coil increased to 20.4%, and the amount of ß-turn reduced from 31 to 18.6%. The alteration of the protein fluorescence spectrum (blue shift in spectrum) provides further evidence that ultrasound alters the proteins' molecular structure in comparation with maceration; the maximum tryptophan fluorescence intensity decreased from 22.000 to 17.096. The hydrophobicity values of 76.8-101.5 were substantially higher than the maceration value of 53.4, indicating that ultrasound improved the hydrophobicity of protein surfaces. Ultrasound resulted in a significant increase in solubility in an acidic environment with the increase in sonication amplitude. A 2.4-fold increase in solubility at pH 2 becomes apparent (20% amplitude; 43.1%) versus maceration (18.2%). The emulsifying ability decreases from 6.62 to 5.13 m2/g once the sonication amplitude increases by 20-70%. By combining the ultrasound periods and amplitudes, it is possible to create high-value protein leaf extracts with improved properties which can find real application as food additives and dietary supplements.


Subject(s)
Cucurbita , Green Chemistry Technology , Plant Leaves , Plant Proteins , Cucurbita/chemistry , Plant Leaves/chemistry , Plant Proteins/chemistry , Antioxidants/chemistry , Ultrasonic Waves , Sonication/methods , Hydrophobic and Hydrophilic Interactions
16.
Food Res Int ; 195: 114995, 2024 Nov.
Article in English | MEDLINE | ID: mdl-39277255

ABSTRACT

Common vetch protein, similar to pea protein, offers valuable qualities like being non-GMO, hypoallergenic, and nutritious. However, its strong beany flavor hinders consumer acceptance. This study explores enzymatic deamidation using glutaminase to address this issue. GC-MS analysis identified 54 volatile compounds in the raw material protein, with 2-pentylfuran, hexanal, and several nonenals contributing the most to the undesirable aroma. Principal component analysis (PCA) confirmed the effectiveness of glutaminase deamidation in removing these off-flavors. The study further reveals that deamidation alters the protein's secondary structure, with an increase in α - helix structure and a decrease in ß - sheet structure. The surface hydrophobicity increased from 587.33 ± 2.63 to 1855.63 ± 3.91 exposing hydrophobic clusters that bind flavor compounds. This disruption weakens the interactions that trap these undesirable flavors, ultimately leading to their release and a more pleasant aroma. These findings provide valuable insights for enzymatic deodorization of not only common vetch protein but also pea protein.


Subject(s)
Glutaminase , Glutaminase/metabolism , Glutaminase/chemistry , Volatile Organic Compounds/analysis , Volatile Organic Compounds/metabolism , Taste , Gas Chromatography-Mass Spectrometry , Flavoring Agents/chemistry , Odorants/analysis , Hydrophobic and Hydrophilic Interactions , Humans , Plant Proteins/chemistry , Plant Proteins/metabolism , Principal Component Analysis , Protein Structure, Secondary
17.
Food Res Int ; 195: 114981, 2024 Nov.
Article in English | MEDLINE | ID: mdl-39277246

ABSTRACT

Cultured meat has been proposed as a promising alternative to conventional meat products. Five different plant protein blends made from soy (from two different manufacturers), wheat, mung bean, and faba bean, were extruded to form low-moisture meat analogs (LMMA) and were used to assess LMMA scaffold potential for cultured meat application. Extruded LMMAs were characterized using scanning electron microscopy, water-holding capacity, total soluble matter, and mechanical properties. Two-dimensional LMMA scaffolds were seeded with C2C12 skeletal myoblast cells and cultured for 14 days, and cell attachment and morphology were evaluated. All five extrudates exhibited directionality of their fibrous protein structures but to varying degrees. Soy, wheat, mung bean, and faba bean-based LMMA scaffolds initially supported myoblast cell growth. However, after 14 days of culture, the extruded wheat LMMA exhibited superior myoblast cell growth. This may be attributed to the highly aligned fibrous structure of the extruded wheat LMMA as well as its elastic modulus, which closely approximated that of native skeletal muscle. Overall, two-dimensional structures of the extruded plant proteins support cell growth and advance the development of cultured meat.


Subject(s)
Cell Proliferation , Myoblasts , Plant Proteins , Triticum , Animals , Triticum/chemistry , Plant Proteins/chemistry , Cell Line , Mice , Tissue Scaffolds/chemistry , Vigna/chemistry , Vicia faba/chemistry , Meat Products/analysis , Glycine max/chemistry , In Vitro Meat
18.
Int J Mol Sci ; 25(18)2024 Sep 12.
Article in English | MEDLINE | ID: mdl-39337338

ABSTRACT

Cys is one of the least abundant amino acids in proteins. However, it is often highly conserved and is usually found in important structural and functional regions of proteins. Its unique chemical properties allow it to undergo several post-translational modifications, many of which are mediated by reactive oxygen, nitrogen, sulfur, or carbonyl species. Thus, in addition to their role in catalysis, protein stability, and metal binding, Cys residues are crucial for the redox regulation of metabolism and signal transduction. In this review, we discuss Cys post-translational modifications (PTMs) and their role in plant metabolism and signal transduction. These modifications include the oxidation of the thiol group (S-sulfenylation, S-sulfinylation and S-sulfonylation), the formation of disulfide bridges, S-glutathionylation, persulfidation, S-cyanylation S-nitrosation, S-carbonylation, S-acylation, prenylation, CoAlation, and the formation of thiohemiacetal. For each of these PTMs, we discuss the origin of the modifier, the mechanisms involved in PTM, and their reversibility. Examples of the involvement of Cys PTMs in the modulation of protein structure, function, stability, and localization are presented to highlight their importance in the regulation of plant metabolic and signaling pathways.


Subject(s)
Cysteine , Plant Proteins , Plants , Protein Processing, Post-Translational , Signal Transduction , Cysteine/metabolism , Cysteine/chemistry , Plant Proteins/metabolism , Plant Proteins/chemistry , Plants/metabolism , Oxidation-Reduction
19.
Int J Mol Sci ; 25(18)2024 Sep 19.
Article in English | MEDLINE | ID: mdl-39337569

ABSTRACT

Polyphenol oxidase (PPO) plays a key role in the enzymatic browning process, and this study employed Gaussian-accelerated molecular dynamics (GaMD) simulations to investigate the catalytic efficiency mechanisms of lotus root PPO with different substrates, including catechin, epicatechin, and chlorogenic acid, as well as the inhibitor oxalic acid. Key findings reveal significant conformational changes in PPO that correlate with its enzymatic activity. Upon substrate binding, the alpha-helix in the Q53-D63 region near the copper ion extends, likely stabilizing the active site and enhancing catalysis. In contrast, this helix is disrupted in the presence of the inhibitor, resulting in a decrease in enzymatic efficiency. Additionally, the F350-V378 region, which covers the substrate-binding site, forms an alpha-helix upon substrate binding, further stabilizing the substrate and promoting catalytic function. However, this alpha-helix does not form when the inhibitor is bound, destabilizing the binding site and contributing to inhibition. These findings offer new insights into the substrate-specific and inhibitor-induced structural dynamics of lotus root PPO, providing valuable information for enhancing food processing and preservation techniques.


Subject(s)
Catechol Oxidase , Lotus , Molecular Dynamics Simulation , Plant Roots , Lotus/enzymology , Catechol Oxidase/metabolism , Catechol Oxidase/chemistry , Plant Roots/enzymology , Substrate Specificity , Markov Chains , Catalytic Domain , Plant Proteins/metabolism , Plant Proteins/chemistry , Catechin/chemistry , Catechin/metabolism , Binding Sites , Normal Distribution
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