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1.
Gigascience ; 8(3)2019 03 01.
Article in English | MEDLINE | ID: mdl-30698687

ABSTRACT

BACKGROUND: Metagenomic studies carried out in the past decade have led to an enhanced understanding of the gut microbiome in human health; however, the Indian gut microbiome has not been well explored. We analyzed the gut microbiome of 110 healthy individuals from two distinct locations (North-Central and Southern) in India using multi-omics approaches, including 16S rRNA gene amplicon sequencing, whole-genome shotgun metagenomic sequencing, and metabolomic profiling of fecal and serum samples. RESULTS: The gene catalogue established in this study emphasizes the uniqueness of the Indian gut microbiome in comparison to other populations. The gut microbiome of the cohort from North-Central India, which was primarily consuming a plant-based diet, was found to be associated with Prevotella and also showed an enrichment of branched chain amino acid (BCAA) and lipopolysaccharide biosynthesis pathways. In contrast, the gut microbiome of the cohort from Southern India, which was consuming an omnivorous diet, showed associations with Bacteroides, Ruminococcus, and Faecalibacterium and had an enrichment of short chain fatty acid biosynthesis pathway and BCAA transporters. This corroborated well with the metabolomics results, which showed higher concentration of BCAAs in the serum metabolome of the North-Central cohort and an association with Prevotella. In contrast, the concentration of BCAAs was found to be higher in the fecal metabolome of the Southern-India cohort and showed a positive correlation with the higher abundance of BCAA transporters. CONCLUSIONS: The study reveals the unique composition of the Indian gut microbiome, establishes the Indian gut microbial gene catalogue, and compares it with the gut microbiome of other populations. The functional associations revealed using metagenomic and metabolomic approaches provide novel insights on the gut-microbe-metabolic axis, which will be useful for future epidemiological and translational researches.


Subject(s)
Feces/microbiology , Gastrointestinal Microbiome/genetics , Genes , Metabolome , Metabolomics/methods , Adolescent , Adult , Child , Child, Preschool , Cluster Analysis , Discriminant Analysis , Humans , India , Infant , Least-Squares Analysis , Membrane Transport Proteins/metabolism , Metagenome , Metagenomics , Middle Aged , RNA, Ribosomal, 16S/genetics , Statistics, Nonparametric , Young Adult
2.
Case Rep Genet ; 2018: 8296478, 2018.
Article in English | MEDLINE | ID: mdl-30271640

ABSTRACT

Jumping translocations of 1q refer to the break-off of chromosome 1q as a donor fusing to two or more recipient chromosomes. We detected jumping translocations of 1q in three patients with initial diagnosis of myelodysplastic syndrome (MDS) and later progression to acute myeloid leukemia (AML). Review of literature found jumping translocations of 1q in 30 reported cases of MDS and AML. The cytogenetic findings from these 33 cases showed that seven cases had a stemline clone and 26 cases had de novo jumping translocations of 1q in which 5% of cell lineages had additional structural rearrangements. In 75% of cases, the 1q donor jumped to the short arm of recipient acrocentric chromosomes. Approximately 82% of the fusions occurred in the telomeric regions of short and long arms and 18% occurred in the pericentric or interstitial regions of recipient chromosomes. Hypomethylation of the donor 1q pericentromeric region and shortened telomeres in recipient chromosomes were associated with the formation of jumping translocations. Jumping translocations of 1q as an indication of chromosomal instability pose high risk for progression of MDS to AML and a poor prognosis. Further understanding of underlying genomic defects and their clinical significance will improve overall treatment and patient care.

3.
J Mech Behav Biomed Mater ; 4(7): 1396-411, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21783150

ABSTRACT

Total knee replacement implants consisting of a Co-29Cr-6Mo alloy femoral component and a Ti-6Al-4V tibial component are the basis for the additive manufacturing of novel solid, mesh, and foam monoliths using electron beam melting (EBM). Ti-6Al-4V solid prototype microstructures were primarily α-phase acicular platelets while the mesh and foam structures were characterized by α(')-martensite with some residual α. The Co-29Cr-6Mo containing 0.22% C formed columnar (directional) Cr(23)C(6) carbides spaced ~2 µm in the build direction, while HIP-annealed Co-Cr alloy exhibited an intrinsic stacking fault microstructure. A log-log plot of relative stiffness versus relative density for Ti-6Al-4V and Co-29Cr-6Mo open-cellular mesh and foams resulted in a fitted line with a nearly ideal slope, n = 2.1. A stress shielding design graph constructed from these data permitted mesh and foam implant prototypes to be fabricated for compatible bone stiffness.


Subject(s)
Arthroplasty, Replacement, Knee , Biocompatible Materials/chemistry , Electrons , Mechanical Phenomena , Prostheses and Implants , Prosthesis Design/methods , Alloys/chemistry , Elastic Modulus , Microscopy, Electron, Scanning , Models, Molecular , Molecular Conformation , Optical Phenomena , Software , X-Ray Diffraction
4.
AACN Clin Issues ; 8(4): 539-49, 1997 Nov.
Article in English | MEDLINE | ID: mdl-9392710

ABSTRACT

Physiologic stabilization and maintenance of life of a critically ill, newly delivered woman is the immediate priority for the critical care team. Once stabilized however, each mother must be evaluated for lactation status. For the mother who has chosen to bottle-feed her infant, the nurse should initiate nursing care measures to suppress lactation. With the mother who has chosen to breast-feed her infant, the nurse has additional responsibility. Because actual breast-feeding will most likely be suspended temporarily, the nursing staff should be knowledgeable in breast care associated with establishing a milk supply, expressing milk to prevent breast engorgement, and initiating actual breast-feeding when the mother's condition permits. This article provides the advanced practice nurse with information, skills, and resources necessary to assess, initiate, and maintain breast-feeding, one of the most important physiologic and psychologic needs of the mother-infant dyad.


Subject(s)
Breast Feeding , Critical Care/methods , Maternal-Child Nursing/methods , Mothers , Female , Humans , Infant , Infant, Newborn
6.
Cancer Treat Rep ; 68(2): 411-2, 1984 Feb.
Article in English | MEDLINE | ID: mdl-6583001

ABSTRACT

Chemotherapy for children with acute lymphoblastic leukemia who relapse during the course of initial treatment has been generally effective in inducing second complete remissions, but the duration of remissions has been very short. We used a combination of drugs, featuring weekly doses of L-asparaginase and cyclic boluses of dactinomycin, to maintain second complete remissions. Eight of ten patients who had had hematologic relapses subsequently entered a second complete remission, the median duration of which was 11.5 months. We conclude that this program resulted in a longer median duration of complete remission than most of the previously reported regimens for the treatment of relapsed childhood acute lymphoblastic leukemia. However, all patients eventually relapsed.


Subject(s)
Antineoplastic Combined Chemotherapy Protocols/therapeutic use , Leukemia, Lymphoid/drug therapy , Acute Disease , Adolescent , Asparaginase/administration & dosage , Child , Child, Preschool , Cyclophosphamide/administration & dosage , Dactinomycin/administration & dosage , Female , Humans , Male , Prednisone/administration & dosage , Prognosis , Recurrence , Vincristine/administration & dosage
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