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Biometals ; 21(4): 459-67, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18286376

ABSTRACT

Three genes within the genome of E. coli K12 are predicted to encode proteins containing the typical Rieske iron-sulfur cluster-binding motifs. Two of these, hcaC and yeaW, were overexpressed in E. coli BL21 and Tuner (DE3) pLacI. The recombinant proteins were purified and analyzed by UV/Vis- and EPR-spectroscopy. HcaC and YeaW display the typical redox-dependent UV/Vis-spectra of iron-sulfur proteins. The EPR spectrum of reduced HcaC shows characteristic g-values of a Rieske cluster whereas the g-values for YeaW are close to the upper limit for this type of iron-sulfur cluster. Both iron-sulfur clusters could be reduced by dithionite, but not by ascorbate, confirming their classification as low-potential Rieske proteins as derived from the amino acid sequences. A phylogenetic analysis of the two proteins reveals that HcaC clearly segregates with the Rieske ferredoxins of class IIB oxygenases whereas the classification of YeaW remains doubtful.


Subject(s)
Escherichia coli Proteins/chemistry , Escherichia coli Proteins/metabolism , Iron-Sulfur Proteins/chemistry , Iron-Sulfur Proteins/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Amino Acid Sequence , Escherichia coli/metabolism , Escherichia coli Proteins/classification , Escherichia coli Proteins/genetics , Ferredoxins/chemistry , Ferredoxins/classification , Ferredoxins/genetics , Ferredoxins/metabolism , Iron-Sulfur Proteins/classification , Iron-Sulfur Proteins/genetics , Models, Molecular , Molecular Sequence Data , Oxidoreductases/chemistry , Oxidoreductases/classification , Oxidoreductases/genetics , Oxidoreductases/metabolism , Phylogeny , Protein Structure, Tertiary , Recombinant Proteins/classification , Recombinant Proteins/genetics , Sequence Alignment , Sequence Analysis, Protein
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