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2.
Integr Comp Biol ; 46(1): 72-81, 2006 Feb.
Article in English | MEDLINE | ID: mdl-21672724

ABSTRACT

Synopsis The process of diversification since the late Tertiary was studied by linking together well-resolved phylogenies and species distributions for tanagers (Aves, Thraupini). Species richness patterns reveal very high densities of range-restricted species in the Andes, and to a lesser extent in the Atlantic forests of south-eastern Brazil, and moderate densities of widespread species in the tropical lowlands. Contemporary climate explains well the variation in species richness for the 25% most widespread species; for the remaining 75% of species with more restricted distributions, variation can only be explained well from topography and landscape complexity. Phylogenetically old species are mainly found along the Andes and along the Rio coast of Brazil. Most other areas outside the Andes probably had very moderate rates of later diversification. In contrast, the humid tropical Andes region was a centre of intensive speciation throughout the evolutionary history of the group, and species richness patterns here seem largely to be driven by the rate of speciation, with further diversification from the highlands into adjacent lowlands. The diversification process in montane areas may be related to high persistence of lineages in specific areas, something that may be related to how climatic changes are moderated by local topography.

3.
Mol Phylogenet Evol ; 21(3): 424-35, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11741384

ABSTRACT

Tanagers of the genus Hemispingus comprise an array of 12 recognized species of rather dull-colored tanagers restricted to Andean forests. Four of these species are polytypic, with as many as seven subspecies recognized for H. superciliaris. Taxonomic relationships within this group, and with similar-looking Basileuterus warblers, have been confusing and not well understood. We used partial DNA sequences of the mitochondrial ND2 gene and a set of morphological characters to study their phylogenetic relationships. Our molecular dataset strongly supports the monophyly of Hemispingus (including the warbler-like species and the finch-like H. rufosuperciliaris) compared to other nine-primaried oscines (Ramphocelus, Chlorospingus, Atlapetes/Buarremon, Basileuterus) and indicates either that Atlapetes/Buarremon could be tanagers or that Chlorospingus could be finches. We propose a phylogeny containing three major clades: mostly greenish eye-browed birds (trifasciatus, atropileus, auricularis, calophrys), mostly gray warbler-like birds (superciliaris, verticalis, xanthophthalmus), and mostly ochraceous birds (rufosuperciliaris and goeringi, piurae, frontalis, melanotis). The relationships among these three clades are left unresolved. We suggest species status for H. auricularis and H. piurae. Our molecular data suggest that most of the diversity in Hemispingus tanagers predates the period of marked ecoclimatic fluctuations in the upper Pleistocene.


Subject(s)
DNA, Mitochondrial/genetics , Phylogeny , Songbirds/classification , Songbirds/genetics , Animals
4.
Mol Phylogenet Evol ; 18(1): 74-83, 2001 Jan.
Article in English | MEDLINE | ID: mdl-11161744

ABSTRACT

The African forest robins (akalats) of the genus Sheppardia are represented by eight forest-dwelling species with restricted distributions in tropical Africa. All but three are strictly montane, inhabiting isolated highland areas in eastern and western Africa. Due to their subtle plumage variation and almost wholly allopatric distribution, determining systematic relationships based upon morphology has proven difficult. However, akalats, due to their distribution, offer an ideal opportunity to test models of speciation within tropical forests. We therefore investigated the phylogeny of species of this genus from presently sampled regions of their distribution using mtDNA sequence analysis. We found that the monophyly of described species, even from disjunct populations, is well supported. However, relationships among species is generally poorly resolved, with support given only to the paired relationships S. montana/S. lowei, S. bocagei/S. gunningi, and S. aequatorialis/S. cyornithopsis. This dataset lent support to S. montana and S. lowei representing a superspecies. All species appear to have evolved rapidly from a common ancestor around the Miocene/Pliocene transition, a time of the last uplift of East Africa's montane region. Surprisingly, intraspecific radiations suggest a far more recent population expansion in the upper Pleistocene, concordant with major climatic variation and vegetational changes. We discuss the implications of our results in the light of previous discussions of the montane speciation model.


Subject(s)
Songbirds/classification , Songbirds/genetics , Africa , Animals , Codon , DNA, Mitochondrial/genetics , Evolution, Molecular , Genetic Variation , Mutation , Phylogeny , Sequence Analysis, DNA
5.
Mol Phylogenet Evol ; 12(3): 273-81, 1999 Aug.
Article in English | MEDLINE | ID: mdl-10413622

ABSTRACT

Relationships among the 18-19 species of spinetails of the genus Cranioleuca are difficult to establish. Attempts based on traditional taxonomic characters have failed because of a high degree of homoplasy. Most morphological characters vary independently, producing leap-frog patterns of variation along the Eastern Brazilian Andean track, and behavior and vocalizations vary little. We use mtDNA sequence data from the cyt b and ND2 genes in an attempt to clarify relationships within the genus. We show (i) that Cranioleuca represents a recent burst of speciation and (ii) that a set of species thought by Maijer and Fjeldså (1997) to form a natural group is in fact a paraphyletic assemblage which also includes humid forest species with different pigmentations and vocalizations. However, synapomorphic variation in the sequences is not sufficient to unambiguously resolve the relationships within the genus. Several species (C. baroni, C. antisiensis, C. pyrrhophia, C. albiceps) show more than one haplotype, without any obvious correlation between genetic and geographic or morphological variation, and the different species do not always show reciprocal monophyly in haplotype diversity. Nevertheless, low genetic differentiation characterizes not only allopatric taxa but also some forms which are essentially sympatric, supporting species rank for the former. Our data suggest a recent diversification and proliferation possibly linked to Pleistocene climatic variation and its consequent vegetational shifts, at least in the Andean species.


Subject(s)
Birds/genetics , Genetic Variation , Phylogeny , Animals , Birds/classification , Cytochrome b Group/genetics , DNA, Mitochondrial/chemistry , DNA, Mitochondrial/genetics , Molecular Sequence Data , NADH Dehydrogenase/genetics , Sequence Analysis, DNA , Tropical Climate
6.
EXS ; 68: 205-25, 1994.
Article in English | MEDLINE | ID: mdl-8032134

ABSTRACT

Tapaculos of the genus Scytalopus are secretive birds which tunnel like mice through dense understory of humid forest in the Andes, Central America, and south-eastern Brazil. Their agoraphobic habits make Scytalopus species highly sensitive to habitat discontinuities, so they are well suited for analyzing diversification patterns in montane forest biota. This study uses DNA sequence data to test hypotheses about past speciation events. The DNA data support that allopatric and parapatric populations with different songs represent different species. The high degree of phylogenetic resolution obtained by DNA-data permits a better description of geographical patterns of endemism. The data suggests that the commonly observed biogeographic pattern, where related species have long linear distributions along the Andes in different altitudinal zones, arose by divergence in disjunct isolates rather than by parapatric divergence. The approach seems well suited for identifying areas that have a special role for the diversification process. The paper finally discusses how detailed phylogenetic studies can be used to test interpretations of biogeographic patterns of high relevance for pinpointing top priority areas for conservation.


Subject(s)
Birds/genetics , DNA/genetics , Phylogeny , Animals , Base Sequence , Birds/classification , Brazil , Central America , Conservation of Natural Resources , DNA/blood , DNA/isolation & purification , DNA Primers , Demography , Mice , Molecular Sequence Data , Species Specificity , Tropical Climate , Vocalization, Animal
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