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1.
NEJM Evid ; 3(5): EVIDoa2300349, 2024 May.
Article in English | MEDLINE | ID: mdl-38815173

ABSTRACT

BACKGROUND: Accumulating preclinical and preliminary translational evidence shows that the hypothalamic peptide oxytocin reduces food intake, increases energy expenditure, and promotes weight loss. It is currently unknown whether oxytocin administration is effective in treating human obesity. METHODS: In this randomized, double-blind, placebo-controlled trial, we randomly assigned adults with obesity 1:1 (stratified by sex and obesity class) to receive intranasal oxytocin (24 IU) or placebo four times daily for 8 weeks. The primary end point was change in body weight (kg) from baseline to week 8. Key secondary end points included change in body composition (total fat mass [g], abdominal visceral adipose tissue [cm2], and liver fat fraction [proportion; range, 0 to 1; higher values indicate a higher proportion of fat]), and resting energy expenditure (kcal/day; adjusted for lean mass) from baseline to week 8 and caloric intake (kcal) at an experimental test meal from baseline to week 6. RESULTS: Sixty-one participants (54% women; mean age ± standard deviation, 33.6 ± 6.2 years; body-mass index [the weight in kilograms divided by the square of the height in meters], 36.9 ± 4.9) were randomly assigned. There was no difference in body weight change from baseline to week 8 between oxytocin and placebo groups (0.20 vs. 0.26 kg; P=0.934). Oxytocin (vs. placebo) was not associated with beneficial effects on body composition or resting energy expenditure from baseline to week 8 (total fat: difference [95% confidence interval], 196.0 g [-1036 to 1428]; visceral fat: 3.1 cm2 [-11.0 to 17.2]; liver fat: -0.01 [-0.03 to 0.01]; resting energy expenditure: -64.0 kcal/day [-129.3 to 1.4]). Oxytocin compared with placebo was associated with reduced caloric intake at the test meal (-31.4 vs. 120.6 kcal; difference [95% confidence interval], -152.0 kcal [-302.3 to -1.7]). There were no serious adverse events. Incidence and severity of adverse events did not differ between groups. CONCLUSIONS: In this randomized, placebo-controlled trial in adults with obesity, intranasal oxytocin administered four times daily for 8 weeks did not reduce body weight. (Funded by the National Institute of Diabetes and Digestive and Kidney Diseases and others; ClinicalTrials.gov number, NCT03043053.).


Subject(s)
Administration, Intranasal , Obesity , Oxytocin , Humans , Oxytocin/administration & dosage , Oxytocin/pharmacology , Oxytocin/adverse effects , Female , Male , Adult , Obesity/drug therapy , Double-Blind Method , Energy Metabolism/drug effects , Body Composition/drug effects , Energy Intake/drug effects , Weight Loss/drug effects
2.
Am J Med Genet A ; 191(12): 2913-2920, 2023 12.
Article in English | MEDLINE | ID: mdl-37715344

ABSTRACT

Chromosomal microarray analysis (CMA) is typically performed for investigation of autism using blood DNA. However, blood collection poses significant challenges for autistic children with repetitive behaviors and sensory and communication issues, often necessitating physical restraint or sedation. Noninvasive saliva collection offers an alternative, however, no published studies to date have evaluated saliva DNA for CMA in autism. Furthermore, previous reports suggest that saliva is suboptimal for detecting copy number variation. We therefore aimed to evaluate saliva DNA for single nucleotide polymorphism (SNP) CMA in autistic children. Saliva DNA from 48 probands and parents (n = 133) was obtained with a mean concentration of 141.7 ng/µL. SNP CMA was successful in 131/133 (98.5%) patients from which we correlated the size and accuracy of a copy number variant(s) called between a proband and carrier parent, and for a subgroup (n = 17 probands) who had a previous CMA using blood sample. There were no discordant copy number variant results between the proband and carrier parent, or the subgroup, however, there was an acceptable mean size difference of 0.009 and 0.07 Mb, respectively. Our findings demonstrate that saliva DNA can be an alternative for SNP CMA in autism, which avoids blood collection with significant implications for clinical practice guidelines.


Subject(s)
Autistic Disorder , Child , Humans , Autistic Disorder/diagnosis , Autistic Disorder/genetics , DNA Copy Number Variations/genetics , Saliva , Polymorphism, Single Nucleotide , Microarray Analysis , DNA
3.
Hum Mutat ; 42(9): 1173-1183, 2021 09.
Article in English | MEDLINE | ID: mdl-34101287

ABSTRACT

Congenital cataracts are one of the major causes of childhood-onset blindness around the world. Genetic diagnosis provides benefits through avoidance of unnecessary tests, surveillance of extraocular features, and genetic family information. In this study, we demonstrate the value of genome sequencing in improving diagnostic yield in congenital cataract patients and families. We applied genome sequencing to investigate 20 probands with congenital cataracts. We examined the added value of genome sequencing across a total cohort of 52 probands, including 14 unable to be diagnosed using previous microarray and exome or panel-based approaches. Although exome or genome sequencing would have detected the variants in 35/52 (67%) of the cases, specific advantages of genome sequencing led to additional diagnoses in 10% (5/52) of the overall cohort, and we achieved an overall diagnostic rate of 77% (40/52). Specific benefits of genome sequencing were due to detection of small copy number variants (2), indels in repetitive regions (2) or single-nucleotide variants (SNVs) in GC-rich regions (1), not detectable on the previous microarray, exome sequencing, or panel-based approaches. In other cases, SNVs were identified in cataract disease genes, including those newly identified since our previous study. This study highlights the additional yield of genome sequencing in congenital cataracts.


Subject(s)
Cataract , Exome , Cataract/diagnosis , Cataract/genetics , Chromosome Mapping , DNA Copy Number Variations/genetics , Exome/genetics , High-Throughput Nucleotide Sequencing , Humans , Exome Sequencing
4.
NPJ Genom Med ; 6(1): 20, 2021 Mar 04.
Article in English | MEDLINE | ID: mdl-33664247

ABSTRACT

Genetic testing in nephrology clinical practice has moved rapidly from a rare specialized test to routine practice both in pediatric and adult nephrology. However, clear information pertaining to the likely outcome of testing is still missing. Here we describe the experience of the accredited Australia and New Zealand Renal Gene Panels clinical service, reporting on sequencing for 552 individuals from 542 families with suspected kidney disease in Australia and New Zealand. An increasing number of referrals have been processed since service inception with an overall diagnostic rate of 35%. The likelihood of identifying a causative variant varies according to both age at referral and gene panel. Although results from high throughput genetic testing have been primarily for diagnostic purposes, they will increasingly play an important role in directing treatment, genetic counseling, and family planning.

5.
Genet Med ; 22(10): 1623-1632, 2020 10.
Article in English | MEDLINE | ID: mdl-32499604

ABSTRACT

PURPOSE: Ocular anterior segment disorders (ASDs) are clinically and genetically heterogeneous, and genetic diagnosis often remains elusive. In this study, we demonstrate the value of a combined analysis protocol using phenotypic, genomic, and pedigree structure data to achieve a genetic conclusion. METHODS: We utilized a combination of chromosome microarray, exome sequencing, and genome sequencing with structural variant and trio analysis to investigate a cohort of 41 predominantly sporadic cases. RESULTS: We identified likely causative variants in 54% (22/41) of cases, including 51% (19/37) of sporadic cases and 75% (3/4) of cases initially referred as familial ASD. Two-thirds of sporadic cases were found to have heterozygous variants, which in most cases were de novo. Approximately one-third (7/22) of genetic diagnoses were found in rarely reported or recently identified ASD genes including PXDN, GJA8, COL4A1, ITPR1, CPAMD8, as well as the new phenotypic association of Axenfeld-Rieger anomaly with a homozygous ADAMTS17 variant. The remainder of the variants were in key ASD genes including FOXC1, PITX2, CYP1B1, FOXE3, and PAX6. CONCLUSIONS: We demonstrate the benefit of detailed phenotypic, genomic, variant, and segregation analysis to uncover some of the previously "hidden" heritable answers in several rarely reported and newly identified ocular ASD-related disease genes.


Subject(s)
Eye Abnormalities , Eye Diseases, Hereditary , ADAMTS Proteins , Anterior Eye Segment , Cytochrome P-450 CYP1B1/genetics , Eye Abnormalities/diagnosis , Eye Abnormalities/genetics , Eye Diseases, Hereditary/diagnosis , Eye Diseases, Hereditary/genetics , Forkhead Transcription Factors/genetics , Humans , Mutation , Pedigree
6.
Am J Kidney Dis ; 76(2): 282-287, 2020 08.
Article in English | MEDLINE | ID: mdl-31810733

ABSTRACT

There is increasing appreciation of nephronophthisis (NPHP) as an autosomal recessive cause of kidney failure and earlier stages of chronic kidney disease among adults. We identified 2 families with presumed adult-diagnosed nonsyndromic NPHP and negative diagnostic genetic testing results from our Renal Genetics Clinic. Both had 2 affected siblings without extrarenal phenotypes. After informed consent, research whole-genome sequencing was undertaken. Biallelic NPHP4 variants were identified in trans and clinically confirmed in all 4 affected individuals, confirming a genetic diagnosis. Participant 1 of the first family (F1P1) had kidney failure diagnosed at 19 years of age. An affected younger sibling (F1P2) reached kidney failure at age 15 years after kidney biopsy suggested NPHP. Pathogenic variants detected in NPHP4 in this family were NM_015102.4:c.3766C>T (p.Gln1256*) and a 31-kb deletion affecting exons 12 to 16. In the second family, F2P3 reached kidney failure at age 27 years having undergone kidney biopsy suggesting NPHP. An affected younger sibling (F2P4) has chronic kidney disease stage 4 at age 39 years. The NPHP4 variants detected were NM_015102.4:c.1998_1999del (p.Tyr667Phefs*23) and c.3646G>T (p.Asp1216Tyr). The latter variant was initially missed in diagnostic sequencing due to inadequate NPHP4 coverage (94.3% exonic coverage). With these reports, we identify NPHP4 as an appreciable genetic cause for adult-diagnosed nonsyndromic NPHP that should be considered by adult nephrologists.


Subject(s)
Kidney Diseases, Cystic/genetics , Kidney/pathology , Proteins/genetics , Renal Insufficiency, Chronic/genetics , Adolescent , Adult , Australia , Codon, Nonsense , Female , Frameshift Mutation , Heterozygote , Humans , Kidney Diseases, Cystic/metabolism , Kidney Diseases, Cystic/pathology , Kidney Failure, Chronic/genetics , Kidney Failure, Chronic/metabolism , Kidney Failure, Chronic/pathology , Male , Pedigree , Polymorphism, Single Nucleotide , Renal Insufficiency, Chronic/metabolism , Renal Insufficiency, Chronic/pathology , Young Adult
7.
Kidney Med ; 1(5): 315-318, 2019.
Article in English | MEDLINE | ID: mdl-32734212

ABSTRACT

New technologies such as genomics present opportunities to deliver precision medicine, including in the diagnosis of rare kidney disorders. Simultaneously, social media platforms such as Twitter can provide rapid and wide-reaching information dissemination in health care and science. We present 2 cases in which the reporting of a novel genetic cause for human kidney disease was communicated through Twitter and then subsequently noted by treating clinicians, thereby resulting in rapid clinical diagnostic translation. In 1 family, this involved the reporting of heterozygous variants in GREB1L relating to autosomal dominant unilateral or bilateral renal agenesis, and in the other family, this involved biallelic variants in CLDN10 relating to autosomal recessive hypokalemic renal tubular phenotypes. The times from Twitter notification to clinical diagnostic genetic report for these families were 111 and 200 days, respectively. Although caution is required, these cases show that social media platforms can contribute to rapid and accessible academic communication that may benefit clinicians, genomics-based researchers, and patients and families affected by rare kidney diseases.

9.
Seizure ; 59: 132-140, 2018 Jul.
Article in English | MEDLINE | ID: mdl-29852413

ABSTRACT

PURPOSE: To report our institutional experience of targeted massively parallel sequencing (MPS) testing in children with epilepsy. METHOD: We retrospectively analysed the yield of targeted epileptic encephalopathy (EE) panel of 71 known EE genes in patients with epilepsy of unknown cause, who underwent clinical triage by a group of neurologists prior to the testing. We compared cost of the EE panel approach compared to traditional evaluation in patients with identified pathogenic variants. RESULTS: The yield of pathogenic variants was 28.5% (n = 30/105), highest in early onset EE <3 months including Ohtahara syndrome (52%, n = 10/19) and lowest in generalized epilepsy (0/17). Patients identified with pathogenic variants had earlier onset of seizures (median 3.6 m vs 1.1y, p < 0.001, OR 0.6/year, P < 0.02) compared to those without pathogenic variants. Pathogenic/likely pathogenic variants were found in ALDH7A1 (2), CACNA1A (1), CDKL5 (3), FOXG1 (2), GABRB3 (1), GRIN2A (1), KCNQ2 (4), KCNQ3 (1), PRRT2 (1), SCN1A (6), SCN2A (2), SCN8A (2), SYNGAP1 (1), UBE3A (2) and WWOX (1) genes. This study expands the inheritance pattern caused by KCNQ3 mutations to include an autosomal recessive severe phenotype with neonatal seizures and severe developmental delay. The average cost of etiological evaluation was less with early use of EE panel compared to the traditional investigation approach ($5990 Australian dollars (AUD) vs $13069 AUD ; p = 0.02) among the patients with identified pathogenic variants. CONCLUSION: Targeted MPS testing is a comprehensive and economical investigation that enables early genetic diagnosis in children with EE. Careful clinical triage and selection of patients with young onset EE may maximize the yield of EE panel testing.


Subject(s)
Epilepsy/diagnosis , Epilepsy/genetics , Genetic Testing , High-Throughput Nucleotide Sequencing , Adolescent , Child , Child, Preschool , Cost-Benefit Analysis , Epilepsy/economics , Female , Genetic Predisposition to Disease , Genetic Testing/economics , Genetic Testing/methods , Genetic Variation , High-Throughput Nucleotide Sequencing/economics , Humans , Infant , Male , Phenotype , Retrospective Studies
10.
Am J Hum Genet ; 102(5): 816-831, 2018 05 03.
Article in English | MEDLINE | ID: mdl-29706353

ABSTRACT

Despite the increasing diagnostic rate of genomic sequencing, the genetic basis of more than 50% of heritable kidney disease remains unresolved. Kidney organoids differentiated from induced pluripotent stem cells (iPSCs) of individuals affected by inherited renal disease represent a potential, but unvalidated, platform for the functional validation of novel gene variants and investigation of underlying pathogenetic mechanisms. In this study, trio whole-exome sequencing of a prospectively identified nephronophthisis (NPHP) proband and her parents identified compound-heterozygous variants in IFT140, a gene previously associated with NPHP-related ciliopathies. IFT140 plays a key role in retrograde intraflagellar transport, but the precise downstream cellular mechanisms responsible for disease presentation remain unknown. A one-step reprogramming and gene-editing protocol was used to derive both uncorrected proband iPSCs and isogenic gene-corrected iPSCs, which were differentiated to kidney organoids. Proband organoid tubules demonstrated shortened, club-shaped primary cilia, whereas gene correction rescued this phenotype. Differential expression analysis of epithelial cells isolated from organoids suggested downregulation of genes associated with apicobasal polarity, cell-cell junctions, and dynein motor assembly in proband epithelial cells. Matrigel cyst cultures confirmed a polarization defect in proband versus gene-corrected renal epithelium. As such, this study represents a "proof of concept" for using proband-derived iPSCs to model renal disease and illustrates dysfunctional cellular pathways beyond the primary cilium in the setting of IFT140 mutations, which are established for other NPHP genotypes.


Subject(s)
Cilia/pathology , Induced Pluripotent Stem Cells/metabolism , Kidney/pathology , Organoids/pathology , Amino Acid Sequence , Base Sequence , Carrier Proteins/chemistry , Carrier Proteins/genetics , Cells, Cultured , Cellular Reprogramming/genetics , Cerebellar Ataxia/genetics , Epithelial Cells/metabolism , Female , Fibroblasts/pathology , Flagella/metabolism , Gene Editing , Gene Expression Profiling , Heterozygote , Humans , Induced Pluripotent Stem Cells/pathology , Kidney/diagnostic imaging , Phenotype , RNA Stability/genetics , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reproducibility of Results , Retinitis Pigmentosa/genetics , Spheroids, Cellular/metabolism , Spheroids, Cellular/pathology , Exome Sequencing
11.
J Clin Neurosci ; 50: 127-128, 2018 Apr.
Article in English | MEDLINE | ID: mdl-29428267

ABSTRACT

Infections are one of the most common causes of mortality in immunocompromised patients. In patients diagnosed with hematologic malignancies, treatment with stem cell transplants (SCT) or T-cell suppressing chemotherapy increases the risk of central nervous system (CNS) infections, of which toxoplasmosis is the most common. We report the case of a 63 year-old woman with chronic lymphocytic leukemia (CLL) that presented with gait instability and visual changes. Intracranial lesions were noted on initial neuro-imaging. A rapid decline in the patient's mental status warranted an urgent biopsy of the lesions that revealed tachyzoites consistent with toxoplasmosis. In the presence of diffuse brain lesions that lack a metastatic pattern or contrast enhancement, a common approach is to perform biopsy only after a battery of non-invasive testing. This diagnostic delay may take several days, exposing the patient to a rapidly fatal infection. This report illustrates the utility of early brain biopsy in high-risk patients with hematologic malignancies and CNS lesions.


Subject(s)
Immunocompromised Host , Leukemia, Lymphocytic, Chronic, B-Cell/complications , Toxoplasmosis, Cerebral/diagnosis , Toxoplasmosis, Cerebral/immunology , Biopsy , Female , Humans , Middle Aged , Opportunistic Infections/diagnosis , Opportunistic Infections/immunology
12.
Kidney Int ; 92(6): 1493-1506, 2017 12.
Article in English | MEDLINE | ID: mdl-28844315

ABSTRACT

Inherited kidney disease encompasses a broad range of disorders, with both multiple genes contributing to specific phenotypes and single gene defects having multiple clinical presentations. Advances in sequencing capacity may allow a genetic diagnosis for familial renal disease, by testing the increasing number of known causative genes. However, there has been limited translation of research findings of causative genes into clinical settings. Here, we report the results of a national accredited diagnostic genetic service for familial renal disease. An expert multidisciplinary team developed a targeted exomic sequencing approach with ten curated multigene panels (207 genes) and variant assessment individualized to the patient's phenotype. A genetic diagnosis (pathogenic genetic variant[s]) was identified in 58 of 135 families referred in two years. The genetic diagnosis rate was similar between families with a pediatric versus adult proband (46% vs 40%), although significant differences were found in certain panels such as atypical hemolytic uremic syndrome (88% vs 17%). High diagnostic rates were found for Alport syndrome (22 of 27) and tubular disorders (8 of 10), whereas the monogenic diagnostic rate for congenital anomalies of the kidney and urinary tract was one of 13. Quality reporting was aided by a strong clinical renal and genetic multidisciplinary committee review. Importantly, for a diagnostic service, few variants of uncertain significance were found with this targeted, phenotype-based approach. Thus, use of targeted massively parallel sequencing approaches in inherited kidney disease has a significant capacity to diagnose the underlying genetic disorder across most renal phenotypes.


Subject(s)
Exome/genetics , Genetic Testing/methods , Kidney Diseases/diagnosis , Adolescent , Adult , Aged , Australia , Child , Child, Preschool , Feasibility Studies , Female , Genetic Counseling/methods , Genetic Variation , High-Throughput Nucleotide Sequencing/methods , Humans , Infant , Infant, Newborn , Kidney Diseases/genetics , Kidney Diseases/therapy , Male , Middle Aged , Phenotype , Precision Medicine/methods , Sequence Analysis, DNA , Young Adult
13.
Int J Neural Syst ; 27(1): 1650049, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27712456

ABSTRACT

Previous experimental studies have demonstrated the emergence of narrowband local field potential oscillations during epileptic seizures in which the underlying neural activity appears to be completely asynchronous. We derive a mathematical model explaining how this counterintuitive phenomenon may occur, showing that a population of independent, completely asynchronous neurons may produce narrowband oscillations if each neuron fires quasi-periodically, without requiring any intrinsic oscillatory cells or feedback inhibition. This quasi-periodicity can occur through cells with similar frequency-current ([Formula: see text]-[Formula: see text]) curves receiving a similar, high amount of uncorrelated synaptic noise. Thus, this source of oscillatory behavior is distinct from the usual cases (pacemaker cells entraining a network, or oscillations being an inherent property of the network structure), as it requires no oscillatory drive nor any specific network or cellular properties other than cells that repetitively fire with continual stimulus. We also deduce bounds on the degree of variability in neural spike-timing which will permit the emergence of such oscillations, both for action potential- and postsynaptic potential-dominated LFPs. These results suggest that even an uncoupled network may generate collective rhythms, implying that the breakdown of inhibition and high synaptic input often observed during epileptic seizures may generate narrowband oscillations. We propose that this mechanism may explain why so many disparate epileptic and normal brain mechanisms can produce similar high frequency oscillations.


Subject(s)
Action Potentials/physiology , Models, Neurological , Neurons/physiology , Periodicity , Algorithms , Animals , Brain/physiology , Brain/physiopathology , Epilepsy/physiopathology , Humans
14.
Circ Cardiovasc Genet ; 9(6): 548-558, 2016 Dec.
Article in English | MEDLINE | ID: mdl-27879313

ABSTRACT

BACKGROUND: The natural history of aortic diseases in patients with TGFBR1 or TGFBR2 mutations reported by different investigators has varied greatly. In particular, the current recommendations for the timing of surgical repair of the aortic root aneurysms may be overly aggressive. METHODS AND RESULTS: The Montalcino Aortic Consortium, which includes 15 centers worldwide that specialize in heritable thoracic aortic diseases, was used to gather data on 441 patients from 228 families, with 176 cases harboring a mutation in TGBR1 and 265 in TGFBR2. Patients harboring a TGFBR1 mutation have similar survival rates (80% survival at 60 years), aortic risk (23% aortic dissection and 18% preventive aortic surgery), and prevalence of extra-aortic features (29% hypertelorism, 53% cervical arterial tortuosity, and 27% wide scars) when compared with patients harboring a TGFBR2 mutation. However, TGFBR1 males had a greater aortic risk than females, whereas TGFBR2 males and females had a similar aortic risk. Additionally, aortic root diameter prior to or at the time of type A aortic dissection tended to be smaller in patients carrying a TGFBR2 mutation and was ≤45 mm in 6 women with TGFBR2 mutations, presenting with marked systemic features and low body surface area. Aortic dissection was observed in 1.6% of pregnancies. CONCLUSIONS: Patients with TGFBR1 or TGFBR2 mutations show the same prevalence of systemic features and the same global survival. Preventive aortic surgery at a diameter of 45 mm, lowered toward 40 in females with low body surface area, TGFBR2 mutation, and severe extra-aortic features may be considered.


Subject(s)
Aorta, Thoracic , Aortic Diseases/genetics , Heterozygote , Mutation , Pregnancy Complications, Cardiovascular/genetics , Protein Serine-Threonine Kinases/genetics , Receptors, Transforming Growth Factor beta/genetics , Aorta, Thoracic/diagnostic imaging , Aorta, Thoracic/surgery , Aortic Diseases/diagnostic imaging , Aortic Diseases/mortality , Aortic Diseases/surgery , Australia/epidemiology , Europe/epidemiology , Female , Genetic Predisposition to Disease , Humans , Japan/epidemiology , Kaplan-Meier Estimate , Male , Phenotype , Pregnancy , Pregnancy Complications, Cardiovascular/diagnostic imaging , Pregnancy Complications, Cardiovascular/mortality , Pregnancy Complications, Cardiovascular/surgery , Prevalence , Proportional Hazards Models , Receptor, Transforming Growth Factor-beta Type I , Receptor, Transforming Growth Factor-beta Type II , Registries , Retrospective Studies , Risk Factors , Severity of Illness Index , Treatment Outcome , United States/epidemiology , Vascular Surgical Procedures
16.
Hum Mutat ; 37(4): 371-84, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26694549

ABSTRACT

Congenital cataracts are a significant cause of lifelong visual loss. They may be isolated or associated with microcornea, microphthalmia, anterior segment dysgenesis (ASD) and glaucoma, and there can be syndromic associations. Genetic diagnosis is challenging due to marked genetic heterogeneity. In this study, next-generation sequencing (NGS) of 32 cataract-associated genes was undertaken in 46 apparently nonsyndromic congenital cataract probands, around half sporadic and half familial cases. We identified pathogenic variants in 70% of cases, and over 68% of these were novel. In almost two-thirds (20/33) of these cases, this resulted in new information about the diagnosis and/or inheritance pattern. This included identification of: new syndromic diagnoses due to NHS or BCOR mutations; complex ocular phenotypes due to PAX6 mutations; de novo autosomal-dominant or X-linked mutations in sporadic cases; and mutations in two separate cataract genes in one family. Variants were found in the crystallin and gap junction genes, including the first report of severe microphthalmia and sclerocornea associated with a novel GJA8 mutation. Mutations were also found in rarely reported genes including MAF, VIM, MIP, and BFSP1. Targeted NGS in presumed nonsyndromic congenital cataract patients provided significant diagnostic information in both familial and sporadic cases.


Subject(s)
Cataract/diagnosis , Cataract/genetics , Genetic Association Studies , High-Throughput Nucleotide Sequencing , Mutation , Alleles , Amino Acid Sequence , Child , Child, Preschool , Computational Biology/methods , Connexins/genetics , Crystallins/genetics , DNA Mutational Analysis , Exome , Female , Genes, X-Linked , Humans , Inheritance Patterns , Male , Membrane Proteins , Nuclear Proteins/genetics , PAX6 Transcription Factor/genetics , Pedigree , Phenotype , Proto-Oncogene Proteins/genetics , Proto-Oncogene Proteins c-maf/genetics , Repressor Proteins/genetics
17.
Sex Transm Dis ; 40(11): 836-8, 2013 Nov.
Article in English | MEDLINE | ID: mdl-24113402

ABSTRACT

BACKGROUND: Erectile dysfunction medications are being prescribed frequently; however, little is known about the amount of sexual health screening occurring in this setting. METHODS: A retrospective cohort study evaluating sexual health and sexually transmitted infection screening occurring in veterans receiving initial erectile dysfunction medication prescription was conducted. RESULTS: A total of 252 patients received initial erectile dysfunction medication prescriptions between October 1, 2009, and December 31, 2009; had at least 1 health care provider visit 12 months before the date of initial prescription; and had no documentation of previous erectile dysfunction medication use. Approximately 3% of these patients had any aspect of a sexual history recorded in the 24 months surrounding initial erectile dysfunction medication prescription. Sexually transmitted infection screening was 9.9% for syphilis, 4.8% for HIV, and 4.3% for gonorrhea/chlamydia before prescription, with only a slight increase in HIV screening after prescription. CONCLUSIONS: Minimal sexual health assessment is being performed during the time surrounding initial prescription of erectile dysfunction medication. Further work needs to evaluate patient and provider barriers to basic elements of sexual health care, such as taking sexual histories or screening for sexually transmitted infections.


Subject(s)
Erectile Dysfunction/drug therapy , Sexual Behavior/statistics & numerical data , Sexually Transmitted Diseases/diagnosis , Sexually Transmitted Diseases/epidemiology , Veterans , Adult , Aged , Aged, 80 and over , Directive Counseling , Electronic Health Records , Erectile Dysfunction/diagnosis , Erectile Dysfunction/epidemiology , Humans , Male , Mass Screening , Middle Aged , Retrospective Studies , United States/epidemiology
18.
Expert Rev Anti Infect Ther ; 11(8): 839-43, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23977939

ABSTRACT

Early syphilis therapy was a focus of intense research in the early 20th century with many and varied approaches being used. The development of penicillin and its efficacy in the treatment of syphilis transformed syphilis management for many with and at risk for infection. However, problems such as beta-lactam allergies and the desire for easily administered, alternate therapies have led to evaluation of multiple other drugs, with doxycycline currently recommended as the main alternative. Ceftriaxone and azithromycin have been shown to be effective, however, each has its own difficulties. Follow-up relies on serological testing, leading to concerns when these tests do not decline appropriately. Given concerns about the potential for increased risk for treatment failure, patients with HIV and pregnant women are of particular concern.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Penicillins/therapeutic use , Syphilis/drug therapy , Anti-Bacterial Agents/administration & dosage , Clinical Protocols , Doxycycline/therapeutic use , Drug Resistance, Bacterial , Female , HIV Infections/complications , HIV Infections/drug therapy , Humans , Penicillins/administration & dosage , Pregnancy , Pregnancy Complications, Infectious/drug therapy , Syphilis/complications , Syphilis/diagnosis , Treponema pallidum/drug effects
19.
Am J Hum Genet ; 91(5): 950-7, 2012 Nov 02.
Article in English | MEDLINE | ID: mdl-23103230

ABSTRACT

Shprintzen-Goldberg syndrome (SGS) is characterized by severe marfanoid habitus, intellectual disability, camptodactyly, typical facial dysmorphism, and craniosynostosis. Using family-based exome sequencing, we identified a dominantly inherited heterozygous in-frame deletion in exon 1 of SKI. Direct sequencing of SKI further identified one overlapping heterozygous in-frame deletion and ten heterozygous missense mutations affecting recurrent residues in 18 of the 19 individuals screened for SGS; these individuals included one family affected by somatic mosaicism. All mutations were located in a restricted area of exon 1, within the R-SMAD binding domain of SKI. No mutation was found in a cohort of 11 individuals with other marfanoid-craniosynostosis phenotypes. The interaction between SKI and Smad2/3 and Smad 4 regulates TGF-ß signaling, and the pattern of anomalies in Ski-deficient mice corresponds to the clinical manifestations of SGS. These findings define SGS as a member of the family of diseases associated with the TGF-ß-signaling pathway.


Subject(s)
Arachnodactyly/genetics , Craniosynostoses/genetics , DNA-Binding Proteins/genetics , Exons , Genes, Dominant , Marfan Syndrome/genetics , Mutation , Proto-Oncogene Proteins/genetics , Adolescent , Adult , Amino Acid Sequence , Child , Child, Preschool , DNA-Binding Proteins/chemistry , Facies , Female , Gene Order , Humans , Male , Models, Molecular , Molecular Sequence Data , Pedigree , Phenotype , Protein Structure, Tertiary , Proto-Oncogene Proteins/chemistry , Sequence Alignment , Young Adult
20.
Sex Transm Dis ; 39(8): 645-7, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22801348

ABSTRACT

BACKGROUND: Serologic tests for syphilis results at the time of diagnosis are the basis for evaluating response to syphilis therapy. After treatment, however, serologic tests for syphilis titers may continue to increase for several weeks. We evaluated rapid plasma reagin (RPR) titer variation during the 14 days after therapy using data from a recent large, prospective randomized controlled trial. METHODS: Prospectively enrolled participants in North America and Madagascar with primary, secondary, or early latent syphilis were randomly assigned to penicillin, doxycycline (in the case of penicillin allergy), or azithromycin treatment. Blood for RPR analysis was drawn at days 0, 7, and 14 posttreatment. All RPR titers were determined simultaneously at a central laboratory. RESULTS: Four hundred and seventy patients had data available for at least 2 of 3 RPR measurements. Overall, 20% of patients showed a titer increase of at least 1 dilution in the 14 days after therapy. The greatest proportion of titer increases following therapy was observed in patients with primary syphilis. Comparing outcome of therapy using the initial (day 0) RPR titer versus the maximal RPR titer (during 14 days) resulted in outcome reclassification in 2.98% of participants. CONCLUSIONS: Despite the fact that about 20% of early syphilis patients had increases in RPR titers immediately after treatment, these changes rarely influenced assessment of therapeutic outcome. Only 3% of patients treated would have been reclassified.


Subject(s)
Anti-Bacterial Agents/administration & dosage , Azithromycin/administration & dosage , Doxycycline/administration & dosage , Penicillins/administration & dosage , Reagins/blood , Syphilis Serodiagnosis/methods , Syphilis/blood , Syphilis/drug therapy , Treponema pallidum/isolation & purification , Adult , Analysis of Variance , Antibodies, Bacterial/blood , Drug Administration Schedule , Drug Therapy, Combination , Female , Humans , Immunologic Factors/blood , Madagascar/epidemiology , Male , Middle Aged , North America/epidemiology , Prospective Studies , Time Factors , Treatment Outcome , Treponema pallidum/immunology , Young Adult
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