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1.
Article in English | MEDLINE | ID: mdl-39140193

ABSTRACT

Writing is usually integrated in the curriculum of science studies. However, students often lack the skills to write for various audiences or, to produce a well written manuscript. We developed a concise project of 15 European Credits to improve the writing skills in an early phase of the bachelor study. Students worked on texts from various journals and looked at the writing styles. They rewrote texts in a popular and more scientific way and practiced with clear, vivid language, avoiding clutter and hedge words, considering a proper use of grammar and interpunction. Medical writing was also introduced during the project. Grading was based on rewriting for a non-expert and expert audience. A rewritten text was presented to the public in the form of a student-initiated survey. This project shows an inverted approach creating student ownership and enthusiasm for writing. In addition, we created and tested successfully a concise two-day workshop based on this project. Based on the results we herewith present the work as an idea to explore.

2.
Proc Natl Acad Sci U S A ; 121(22): e2308414121, 2024 May 28.
Article in English | MEDLINE | ID: mdl-38768343

ABSTRACT

The complex sequential response of frustrated materials results from the interactions between material bits called hysterons. Hence, a central challenge is to understand and control these interactions, so that materials with targeted pathways and functionalities can be realized. Here, we show that hysterons in serial configurations experience geometrically controllable antiferromagnetic-like interactions. We create hysteron-based metamaterials that leverage these interactions to realize targeted pathways, including those that break the return point memory property, characteristic of independent or weakly interacting hysterons. We uncover that the complex response to sequential driving of such strongly interacting hysteron-based materials can be described by finite state machines. We realize information processing operations such as string parsing in materia, and outline a general framework to uncover and characterize the FSMs for a given physical system. Our work provides a general strategy to understand and control hysteron interactions, and opens a broad avenue toward material-based information processing.

3.
PNAS Nexus ; 3(1): pgad451, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38222467

ABSTRACT

Dense suspensions exhibit the remarkable ability to switch dynamically and reversibly from a fluid-like to a solid-like, shear-jammed (SJ) state. Here, we show how this transition has important implications for the propensity for forming fractures. We inject air into bulk dense cornstarch suspensions and visualize the air invasion into the opaque material using time-resolved X-ray radiography. For suspensions with cornstarch mass fractions high enough to exhibit discontinuous shear thickening and shear jamming, we show that air injection leads to fractures in the material. For high mass fractions, these fractures grow quasistatically as rough cavities with fractured interfaces. For lower mass fractions, remarkably, the fractures can relax to smooth bubbles that then rise under buoyancy. We show that the onset of the relaxation occurs as the shear rate induced by the air cavity growth decreases below the critical shear rate denoting the onset of discontinuous shear thickening, which reveals a structural signature of the SJ state.

4.
Acta Physiol (Oxf) ; 240(1): e14067, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38093597
5.
Chemosphere ; 285: 131468, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34271465

ABSTRACT

Changes in lead (Pb) speciation in the rhizosphere may be plant species-dependent and dictate Pb fate and behavior in the soil-plant system. X-ray absorption near edge structure (XANES) spectroscopy can explain how these changes affect Pb availability in soils and its uptake by plants. We investigated the changes in Pb speciation and availability in the rhizosphere of eucalypt (Eucalyptus urophylla x Eucalyptus grandis), palisade grass (Urochloa brizantha cv. Marandu), and Indian mustard (Brassica juncea L.) using XANES spectroscopy. A greenhouse experiment was performed in a complete randomized design, with three plant species and a no plant control treatment. After three months, rhizosphere and bulk soil samples were collected, Pb speciation was assessed by Pb L3-edge XANES spectroscopy, and Pb concentration was determined in plant tissue. In bulk soil, we found Pb primarily as Pb-Il (Pb sorbed to illite; 48%) and lead monoxide (PbO; 36%). In the rhizosphere, Pb-Ka (Pb sorbed to kaolinite; 33-56%) and (CH3COO)2Pb (25-41%) were the main Pb forms, the latter suggesting Pb complexation by low molecular weight organic acids (LMWOAs). Palisade grass rhizospheric soil had a lower abundance of Pb-Ka and a higher abundance of (CH3COO)2Pb than eucalypt and mustard, which led to low Pb concentration in plant tissue. LMWOAs exudation followed by Pb2+ complexation is the apparent mechanism used by palisade grass to detoxify the rhizosphere and control Pb uptake. Given its low Pb uptake and potential to complex Pb in organic forms, palisade grass may be a promising species for Pb phytostabilization in contaminated soils.


Subject(s)
Soil Pollutants , Environmental Pollution , Lead , Plant Roots/chemistry , Random Allocation , Rhizosphere , Soil , Soil Pollutants/analysis
6.
RSC Adv ; 11(49): 30744-30754, 2021 Sep 14.
Article in English | MEDLINE | ID: mdl-35479871

ABSTRACT

Three amorphous forms of Ar hydrate were produced using the crystalline clathrate hydrate Ar·6.5H2O (structure II, Fd3̄m, a ≈ 17.1 Å) as a precursor and structurally characterized by a combination of isotope substitution (36Ar) neutron diffraction and molecular dynamics (MD) simulations. The first form followed from the pressure-induced amorphization of the precursor at 1.5 GPa at 95 K and the second from isobaric annealing at 2 GPa and subsequent cooling back to 95 K. In analogy to amorphous ice, these amorphs are termed high-density amorphous (HDA) and very-high-density amorphous (VHDA), respectively. The third amorph (recovered amorphous, RA) was obtained when recovering VHDA to ambient pressure (at 95 K). The three amorphs have distinctly different structures. In HDA the distinction of the original two crystallographically different Ar guests is maintained as differently dense Ar-water hydration structures, which expresses itself in a split first diffraction peak in the neutron structure factor function. Relaxation of the local water structure during annealing produces a homogeneous hydration environment around Ar, which is accompanied with a densification by about 3%. Upon pressure release the homogeneous amorphous structure undergoes expansion by about 21%. Both VHDA and RA can be considered frozen solutions of immiscible Ar and water in which in average 15 and 11 water molecules, respectively, coordinate Ar out to 4 Å. The local water structures of HDA and VHDA Ar hydrates show some analogy to those of the corresponding amorphous ices, featuring H2O molecules in 5- and 6-fold coordination with neighboring molecules. However, they are considerably less dense. Most similarity is seen between RA and low density amorphous ice (LDA), which both feature strictly 4-coordinated H2O networks. It is inferred that, depending on the kind of clathrate structure and occupancy of cages, amorphous states produced from clathrate hydrates display variable local water structures.

7.
Biochem Mol Biol Educ ; 48(4): 404-410, 2020 07.
Article in English | MEDLINE | ID: mdl-32585770

ABSTRACT

DNA barcoding is an important molecular methodology for species identification that was developed over the last two decades and it should be covered in the biology bachelor curriculum. Here, we present an example of DNA barcoding by sequencing a segment of the 28S nuclear ribosomal large subunit rRNA gene of wild mushrooms and framing the education in a project form for undergraduate students in biology. Students perform this project in 6-8 weeks, which also includes preparing a poster, writing a report and presenting a paper related to the work in a journal club format. First, fieldwork in the Netherlands was carried out, during which students collected mushrooms under supervision of a professional mycologist with the goal to (a) verify morphologically based identifications with a molecular method and (b) assess phylogenetic relationships of the different species collected. Next, DNA extractions and quantitation were performed, PCR amplification was done, and samples were sent out for Sanger sequencing. Students aligned and analyzed the sequences using BLAST and Geneious and subsequently created a phylogenetic tree. In case of collecting DNA barcodes of an earlier sequenced species, students could upload the data to a repository established for facilitation of future research projects. The method described is very robust, reagents and equipment are readily available, and costs are relatively low. In addition, the results can be compared to published fungal phylogenetic trees.


Subject(s)
Agaricales/genetics , DNA Barcoding, Taxonomic/methods , Genes, rRNA/genetics , Polymerase Chain Reaction/methods , RNA, Ribosomal, 28S/analysis , RNA, Ribosomal, 28S/genetics , Sequence Analysis, DNA/methods , Agaricales/classification , Base Sequence , Humans , Phylogeny , Sequence Homology
8.
Phys Rev E ; 100(6-1): 063105, 2019 Dec.
Article in English | MEDLINE | ID: mdl-31962541

ABSTRACT

A vapor bubble collapsing near a solid boundary in a liquid produces a liquid jet that points toward the boundary. The direction of this jet has been studied for boundaries such as flat planes and parallel walls enclosing a channel. Extending these investigations to enclosed polygonal boundaries, we experimentally measure jet direction for collapsing bubbles inside a square and an equilateral triangular channel. Following the method of Tagawa and Peters [Phys. Rev. Fluids 3, 081601 (2018)10.1103/PhysRevFluids.3.081601] for predicting the jet direction in corners, we model the bubble as a sink in a potential flow and demonstrate by experiment that analytical solutions accurately predict jet direction within an equilateral triangle and square. We further use the method to develop predictions for several other polygons, specifically, a rectangle, an isosceles right triangle, and a 30^{∘}-60^{∘}-90^{∘} right triangle.

9.
PLoS One ; 13(8): e0201597, 2018.
Article in English | MEDLINE | ID: mdl-30118486

ABSTRACT

BACKGROUND: In the presence of a coronary occlusion, pre-existing small collateral vessels (arterioles) develop into much larger arteries (biological bypasses) that have the potential to allow a certain level of perfusion distal to the blockage. Termed arteriogenesis, this phenomenon proceeds via a complex combination of events, with nitric oxide (NO) playing an essential role. The aim of this study was to investigate the effects of supplemental administration of NO donors, i.e., short-acting nitroglycerin (NTG) or slow-release pelleted isosorbide dinitrate (ISDN), on collateral development in a repetitive coronary artery occlusion model in rats. METHODS: Coronary collateral growth was induced via a repetitive occlusion protocol (ROP) of the left anterior descending coronary artery (LAD) in rats. The primary endpoints were the histological evaluation of rat heart infarct size and ST-segment elevation (ECG-analysis) upon final permanent occlusion of the LAD (experimentally induced myocardial infarction). The effects of NTG or ISDN were also evaluated by administration during 5 days of ROP. We additionally investigated whether concomitant application of NTG can compensate for the anti-arteriogenic effect of acetylsalicylic acid (ASA). RESULTS: After 5 days of ROP, the mean infarct size and degree of ST-elevation were only slightly lower than those of the SHAM group; however, after 10 days of the protocol, the ROP group displayed significantly less severe infarct damage, indicating enhanced arteriogenesis. Intermittent NTG application greatly decreased the ST-elevation and infarct size. The ISDN also had a positive effect on arteriogenesis, but not to the same extent as the NTG. Administration of ASA increased the infarct severity; however, concomitant dosing with NTG somewhat attenuated this effect. CONCLUSION: Intermittent treatment with the short-acting NTG decreased the size of an experimentally induced myocardial infarct by promoting coronary collateral development. These new insights are of great relevance for future clinical strategies for the treatment of occlusive vascular diseases.


Subject(s)
Coronary Occlusion/drug therapy , Isosorbide Dinitrate/administration & dosage , Myocardial Infarction/drug therapy , Nitroglycerin/administration & dosage , Animals , Aorta, Thoracic , Aspirin/adverse effects , Coronary Vessels/drug effects , Coronary Vessels/physiology , Disease Models, Animal , Humans , Isosorbide Dinitrate/pharmacology , Male , Nitroglycerin/pharmacology , Random Allocation , Rats , Rats, Sprague-Dawley , Research Design
10.
Talanta ; 188: 168-177, 2018 Oct 01.
Article in English | MEDLINE | ID: mdl-30029359

ABSTRACT

Near-infrared (NIR) spectroscopy and chemometric methods were used to predict the chemical properties of decomposing eucalyptus harvest residues to better understand the decomposition process of these materials. Leaves, twigs, branches, and bark from a decomposition experimental set up in commercial plantations were sampled for one year. The contents of carbon (C), nitrogen (N), extractives (EX), acid-soluble lignin (SL), Klason insoluble lignin (KL) and holocellulose (HC) were determined by the reference method in the collected samples. Principal component analysis (PCA) was employed to distinguish the types of harvest residues throughout the decomposition period. Multi-residue regression models were built from the NIR spectra using partial least squares regression (PLS). Two feature selection methods, i.e., ordered predictors selection (OPS) and genetic algorithm (GA), were applied and compared. The OPS and GA did not differ statistically; however, compared with the GA, OPS was more computationally efficient and selected fewer variables. Using the PLS-OPS models, the root mean square errors of prediction (RMSEP) for C, N, EX, SL, KL and HC were 19.70, 0.08, 0.74, 0.39, 28.13 and 33.99, respectively, and the prediction correlations (Rp) for these properties were 0.94, 0.99, 0.99, 0.99, 0.96 and 0.98, respectively. PLS-discriminant analysis (PLS-DA) was used to classify the samples over the decomposition time and provided a good separation. Some mismatches obtained in the modeled classes were explained by the differences in the decomposition rate and changes in the chemical composition of the different harvest residue components that were evaluated. The results showed the feasibility of NIR spectroscopy and chemometric methods to evaluate the chemistry of decomposing eucalyptus harvest residues, indicating that these methods can be used as rapid and inexpensive alternatives to conventional methods to help understand the decomposition process.

11.
Atherosclerosis ; 272: 87-93, 2018 05.
Article in English | MEDLINE | ID: mdl-29579672

ABSTRACT

BACKGROUND AND AIMS: Arteriogenesis, the positive outward remodeling and growth of pre-existent collateral vessels, holds potential as a novel treatment for ischemic vascular disease. An extracranial arteriogenesis model in a pig will allow us to study molecular changes in a complex arteriolar network in a more clinically relevant large-animal model. To increase fluid shear stress in the brain, an experimental carotid arteriovenous fistula (AVF model) in minipigs was established, providing high flow through the extracranial rete mirabile. The aim of the study was to examine whether creation of a carotid AVF can induce extracranial arteriogenesis in the pig. METHODS: Angiography was performed to demonstrate blood flow diversion. Animals were sacrificed after 0, 3 and 14 days post-surgery and both retia mirabilia were removed. Immunohistochemical analysis was performed to analyze cell proliferation and accumulation of mononuclear cells in the vessel wall. RESULTS: After 3 days of high-flow conditions, increases in vascular cell proliferation (approximately 1.5-fold; p = 0.143) and monocyte invasion (approximately 6-fold; p = 0.057) were observed when compared to animals sacrificed immediately after AVF formation. Quantitative PCR (RT-qPCR) analysis from rete mirabile tissue samples 3 days post-surgery revealed that monocyte chemoattractant protein (MCP)-1 and tissue inhibitor of metalloproteinases (TIMP)-1 were highly upregulated. Expression of the pro-arteriogenic marker, CD44, reached maximum expression level 14 days post-surgery. CONCLUSIONS: In response to high levels of shear stress produced in the pig AVF model, the onset of the arteriogenic process can be induced. This was demonstrated by enhanced cell proliferation, monocyte invasion and vascular remodeling.


Subject(s)
Arteries/physiology , Arteriovenous Fistula/physiopathology , Disease Models, Animal , Neovascularization, Pathologic , Angiography , Animals , Arteriovenous Fistula/complications , Cell Proliferation , Chemokine CCL2/metabolism , Collateral Circulation , Female , Gene Expression Regulation , Hyaluronan Receptors/metabolism , Immunohistochemistry , Inflammation , Leukocytes, Mononuclear/cytology , Macrophages/cytology , Male , Monocytes/cytology , Neovascularization, Physiologic , Swine , Swine, Miniature , Tissue Inhibitor of Metalloproteinase-1/metabolism , Up-Regulation
12.
Dalton Trans ; 47(9): 2852-2866, 2018 Feb 27.
Article in English | MEDLINE | ID: mdl-29210398

ABSTRACT

The intercalated layered materials are commonly built from structures complex enough to have large unit cells and, because of this, calculations of their electronic structures are very demanding in terms of memory, processing and time. Also, the versatility of these compounds enables the synthesis of a large number of derived materials difficult to characterize. Only in the last two decades, a combination of theoretical methodologies and advances in processing made density-functional theory (DFT) calculations quite interesting as an investigation tool for this family of materials. Since the intercalated layered or lamellar compounds correspond to a large group of important classes of materials and their experimental data were, and are still being, generated, only a small part of the data comes from electronic structure simulations. In this review, we have listed some relevant types of intercalated lamellar materials, the useful methodologies implemented in the standard suit of codes for DFT calculations and examples of the many applications of the calculations to the understanding of physical and chemical properties, to the planning of novel materials with desirable properties, and even to assist the structural characterization, by simulating complex results from nuclear magnetic resonance, vibrational spectroscopy and powder X-ray diffraction. In addition to the properties simulated directly as observables, other quantities such as density of states, partial charges and electronic density difference, provide relevant information about the materials and their behavior under diverse physical and chemical conditions. The combination of the geometric, electronic and vibrational structures also leads to the simulations of thermodynamic potentials, entropy and phase diagrams in the solid state. This significant ensemble of research tools makes DFT calculations very compelling and useful to gain new insights into innovation developments for intercalated lamellar materials.

13.
Coron Artery Dis ; 29(2): 127-137, 2018 03.
Article in English | MEDLINE | ID: mdl-29084040

ABSTRACT

BACKGROUND: For patients with severe ischemic heart disease, complete revascularization by a percutaneous coronary intervention or coronary artery bypass grafting is often not achieved and may still cause residual angina. In case of progressive coronary artery occlusions, therapeutic arteriogenesis constitutes a promising strategy for increasing blood supply to the ischemic myocardium. Whether the formation of collaterals in the hypofused myocardium is angiogenetic in nature or based on preformed coronary artery anastomoses remains debatable. The objectives of this research were (i) the development of an appropriate research methodology to study a humanoid animal semiacute infarction model with low mortality and (ii) to answer the question of whether collateral revascularization follows a pre-existing 'blueprint'. MATERIALS AND METHODS: A porcine model was chosen in which a step-wise vessel occlusion was performed by implantation of a copper stent into the distal left anterior descending artery. Vessel occlusion and collateral development were confirmed in vivo every 14 days up to day 56 by repeated coronary angiography and myocardial perfusion measurement using cardiac MRI. After the completion of the in-vivo imaging studies, animals were euthanized and collateral growth was evaluated using microcomputer tomography. RESULTS: Our porcine model of semiacute noninvasive coronary artery occlusion confirmed the existence of preformed coronary anastomoses and the proliferation of functional vessels in hypoperfused myocardium. Repetitive intra-animal MRIs showed the functional impact of these growing collaterals. CONCLUSION: The confirmation of preformed coronary anastomoses during the process of collateralization (natural bypasses) offers a preclinical avenue to carry out arteriogenetic pharmaceutical research in patients with ischemic heart disease.


Subject(s)
Collateral Circulation , Coronary Circulation , Coronary Occlusion/physiopathology , Coronary Vessels/physiopathology , Myocardial Infarction/physiopathology , Animals , Computed Tomography Angiography , Coronary Angiography/methods , Coronary Occlusion/diagnostic imaging , Coronary Occlusion/surgery , Coronary Vessels/diagnostic imaging , Coronary Vessels/surgery , Disease Models, Animal , Magnetic Resonance Imaging , Myocardial Infarction/diagnostic imaging , Myocardial Infarction/surgery , Myocardial Perfusion Imaging/methods , Neovascularization, Physiologic , Percutaneous Coronary Intervention/instrumentation , Stents , Sus scrofa , Time Factors , X-Ray Microtomography
14.
Open Heart ; 5(2): e000889, 2018.
Article in English | MEDLINE | ID: mdl-30613411

ABSTRACT

Objective: We investigated the impact of cardioprotective drugs on ST-elevation, arrhythmias and infarct size in a rat model of repetitive coronary artery occlusion. Methods: Seventy Sprague-Dawley rats were randomised to two control and five treatment groups. Placebo was either implantation of a pneumatic occluder onto the left anterior descending coronary artery (LAD) without starting repetitive occlusion (SHAM) or subsequent RO of the LAD over 10 days without medication (ROP). Treatment groups underwent RO and additionally received nitroglycerin (NTG), metoprolol, verapamil (VER), ranolazine (RAN) or candesartan (CAN). Two weeks after the intervention, rats underwent a single, sustained LAD occlusion followed by reperfusion. To evaluate differences in cardiac resistance against myocardial ischaemia and reperfusion injury, cardiac surrogate parameters including maximal ST-elevation, arrhythmias and infarct size were assessed. Results: Compared with sham, RO alone and RO plus nitroglycerin were associated with significantly lower maximal ST-elevation and percentage of infarcted myocardium (SHAM 0.12 mV, ROP 0.06 mV (p=0.004), NTG 0.05 mV (p=0.005); SHAM 16.2%, ROP 6.6% (p=0.008), NTG 5.9% (p=0.006). Compared with RO alone, RO plus RAN was accompanied by increased ST-elevation (0.13 mV, p=0.018) and RO plusVER or CAN by more infarcted myocardium (14.2%, p=0.004% and 15.5%, p=0.003, respectively). Rats treated with VER, RAN or CAN tended to severe arrhythmias more frequently than those of the control groups. Conclusions: RO led to an increased myocardial resistance against ischaemia and reperfusion injury. Concomitant administration of nitroglycerin did not affect the efficacy of RO. Cardiovascular channel or receptor blockers reduced the efficacy of RO.

15.
Nat Commun ; 8(1): 509, 2017 09 11.
Article in English | MEDLINE | ID: mdl-28894143

ABSTRACT

Scales are rooted in soft tissues, and are regenerated by specialized cells. The realization of dynamic synthetic analogues with inorganic materials has been a significant challenge, because the abiological regeneration sites that could yield deterministic growth behavior are hard to form. Here we overcome this fundamental hurdle by constructing a mutable and deformable array of three-dimensional calcite heterostructures that are partially locked in silicone. Individual calcite crystals exhibit asymmetrical dumbbell shapes and are prepared by a parallel tectonic approach under ambient conditions. The silicone matrix immobilizes the epitaxial nucleation sites through self-templated cavities, which enables symmetry breaking in reaction dynamics and scalable manipulation of the mineral ensembles. With this platform, we devise several mineral-enabled dynamic surfaces and interfaces. For example, we show that the induced growth of minerals yields localized inorganic adhesion for biological tissue and reversible focal encapsulation for sensitive components in flexible electronics.Minerals are rarely explored as building blocks for dynamic inorganic materials. Here, the authors derive inspiration from fish scales to create mutable surfaces based on arrays of calcite crystals, in which one end of each crystal is immobilized in and regenerated from silicone, and the other functional end is left exposed.

16.
Heart Vessels ; 32(11): 1400-1409, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28776069

ABSTRACT

Bridging collaterals (BC) develop in several chronic total artery occlusion diseases, and can prevent extensive myocardial necrosis. Yet, their origin, growth process, and histo-morphology are still unclear. Since vasa vasorum (VV) may take part in collateralization, we hypothesized that VV are the basis for BCs. To comprehensively investigate this arteriogenesis process, we used high-resolution imaging, including corrosion casts, post-mortem angiography with stereoscopy, micro-CT, and immunohistology, in combination with a novel semi-acute vessel occlusion model. This porcine model was produced by implanting a copper stent minimally invasively into the left anterior descending coronary artery. To define the kinetics of arteriogenesis, pigs (n = 11) were assigned to one of the five euthanasia timepoints: day 0.5 (D0.5, n = 2), D3 (n = 2), D5 (n = 1), D7 (n = 3), or D12 (n = 3) after stent implantation. We found that (1) BCs originate from longitudinally running type 1 VV, mainly VV interna, partially also from VV externa; (2) the growth of VV to BC is rapid, occurring within 7 days; and (3) porcine BCs are likely functionally relevant, considering an observed 102% increase in the number of smooth muscle cell layers in their vascular wall. High-resolution imaging in a minimally invasive non-acute vessel occlusion model is an innovative technique that allowed us to provide direct evidence that porcine BCs develop from the VV. These data may be crucial for further studies on the treatment of angina pectoris and thromboangiitis obliterans through therapeutic stimulation of BC development.


Subject(s)
Coronary Occlusion/diagnostic imaging , Multidetector Computed Tomography/methods , Neovascularization, Pathologic/diagnostic imaging , Radiographic Image Enhancement/methods , Vasa Vasorum/diagnostic imaging , X-Ray Microtomography/methods , Acute Disease , Animals , Coronary Angiography , Disease Models, Animal , Swine
17.
Phys Rev E ; 95(1-1): 012603, 2017 Jan.
Article in English | MEDLINE | ID: mdl-28208491

ABSTRACT

Unlike dry granular materials, a dense granular suspension like cornstarch in water can strongly resist extensional flows. At low extension rates, such a suspension behaves like a viscous fluid, but rapid extension results in a response where stresses far exceed the predictions of lubrication hydrodynamics and capillarity. To understand this remarkable mechanical response, we experimentally measure the normal force imparted by a large bulk of the suspension on a plate moving vertically upward at a controlled velocity. We observe that, above a velocity threshold, the peak force increases by orders of magnitude. Using fast ultrasound imaging we map out the local velocity profiles inside the suspension, which reveal the formation of a growing jammed region under rapid extension. This region interacts with the rigid boundaries of the container through strong velocity gradients, suggesting a direct connection to the recently proposed shear-jamming mechanism.

18.
Front Pharmacol ; 8: 962, 2017.
Article in English | MEDLINE | ID: mdl-29358919

ABSTRACT

Rheumatoid arthritis synovial fibroblasts (RASFs) are fundamental effector cells in RA driving the joint inflammation and deformities. Celastrol is a natural compound that exhibits a potent anti-arthritic effect promoting endoplasmic reticulum (ER) stress mediated by intracellular calcium (Ca2+) mobilization. Ca2+ is a second messenger regulating a variety of cellular processes. We hypothesized that the compound, celastrol, affecting cytosolic Ca2+ mobilization could serve as a novel strategy to combat RA. To address this issue, celastrol was used as a molecular tool to assay the inflammatory gene expression profile regulated by Ca2+. We confirmed that celastrol treatment mobilized cytosolic Ca2+ in patient-derived RASFs. It was found that 23 genes out of 370 were manipulated by Ca2+ mobilization using an inflammatory and autoimmunity PCR array following independent quantitative PCR validation. Most of the identified genes were downregulated and categorized into five groups corresponding to their cellular responses participating in RA pathogenesis. Accordingly, a signaling network map demonstrating the possible molecular circuitry connecting the functions of the products of these genes was generated based on literature review. In addition, a bioinformatics analysis revealed that celastrol-induced Ca2+ mobilization gene expression profile showed a novel mode of action compared with three FDA-approved rheumatic drugs (methotrexate, rituximab and tocilizumab). To the best of our knowledge, this is a pioneer work charting the Ca2+ signaling network on the regulation of RA-associated inflammatory gene expression.

19.
J Environ Qual ; 45(6): 1988-1997, 2016 Nov.
Article in English | MEDLINE | ID: mdl-27898793

ABSTRACT

The development of efficient fertilizers with a diminished environmental footprint will help meet the increasing demand for food and nutrients by a growing global population. Our objective was to evaluate whether an acidic mine waste (AMW) could be used beneficially by reacting it with sparingly soluble phosphate rocks (PRs) to produce more soluble P fertilizer materials. Three PRs from Brazil and Peru were reacted with different concentrations of AMW. Changes in mineralogy and P species were determined using a combination of X-ray diffraction and phosphorus K-edge XANES spectroscopy, in addition to extractable P concentrations. Increasing the AMW concentration typically increased extractable P. X-ray diffraction data showed transformation of apatite to other species when PRs were reacted with AMW at ≥50% (v/v) in water, with gypsum or anhydrite forming at AMW concentrations as low as 12.5%. Linear combination fitting analysis of X-ray absorption near edge structure spectra also indicated a progressive transformation of apatite to noncrystalline Fe(III)-phosphate and more soluble Ca-phosphates with increasing AMW concentration. Because this AMW is costly to dispose of, reacting it with PR to produce a higher-grade phosphate fertilizer material could decrease the environmental impacts of the AMW and diminish the consumption of pure acids in conventional P fertilizer production.


Subject(s)
Phosphates/chemistry , Waste Disposal, Fluid , Ferric Compounds , Fertilizers , Hydrogen-Ion Concentration , Phosphorus , Water
20.
Phys Rev E ; 93(6): 062609, 2016 Jun.
Article in English | MEDLINE | ID: mdl-27415322

ABSTRACT

We experimentally investigated the splashing of dense suspension droplets impacting a solid surface, extending prior work to the regime where the viscosity of the suspending liquid becomes a significant parameter. The overall behavior can be described by a combination of two trends. The first one is that the splashing becomes favored when the kinetic energy of individual particles at the surface of a droplet overcomes the confinement produced by surface tension. This is expressed by a particle-based Weber number We_{p}. The second is that splashing is suppressed by increasing the viscosity of the solvent. This is expressed by the Stokes number St, which influences the effective coefficient of restitution of colliding particles. We developed a phase diagram where the splashing onset is delineated as a function of both We_{p} and St. A surprising result occurs at very small Stokes number, where not only splashing is suppressed but also plastic deformation of the droplet. This leads to a situation where droplets can bounce back after impact, an observation we are able to reproduce using discrete particle numerical simulations that take into account viscous interaction between particles and elastic energy.

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