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1.
Dokl Biol Sci ; 511(1): 267-271, 2023 Aug.
Article En | MEDLINE | ID: mdl-37833585

The mandibles of two individuals of Mustela palerminea (Petenyi, 1864) are described  from the Lower Pleistocene deposits of the Taurida cave in Crimea (Late Villafranchian, 1.8-1.5 Ma). This extinct mustelid species was a typical representative of the Villafranchian faunas of Europe. It is the first record of M. palerminea in Russia.


Carnivora , Mustelidae , Humans , Animals , Fossils , Mandible , Europe
2.
Dokl Biol Sci ; 511(1): 284-288, 2023 Aug.
Article En | MEDLINE | ID: mdl-37700102

The dentary of Mustela strandi Kormos, 1934 is described from the Lower Pleistocene deposits (Late Villafranchian, 1.8-1.5 Ma) of the Taurida cave in Crimea. It is the first finding of M. strandi in Russia. This extinct mustelid species is rarely found in the Lower and Middle Pleistocene of Central Europe.


Carnivora , Mustelidae , Animals , Russia , Europe , Fossils
3.
Stem Cell Res ; 71: 103183, 2023 09.
Article En | MEDLINE | ID: mdl-37643494

We generated two human induced pluripotency stem cell (hiPSC) lines, RCMGi011-A and 11-B, from skin fibroblast from patient with Mucopolysaccharidosis IV B type and autosomal recessive non-syndromic hearing loss 12 using non-integrating, viral CytoTune™-iPS 2.0 Sendai Reprogramming Kit. We verified variant c.808 T > G and insertion in GLB1 gene, as well as two mutations, c.6992 T > C and c.805C > T, in CDH23 gene which lead to autosomal recessive hearing loss type 12. We have demonstrated normal karyotype of hiPSCs and capacity for cell differentiation into three germ layers.


Hearing Loss , Induced Pluripotent Stem Cells , Mucopolysaccharidosis IV , Humans , Cell Differentiation , Fibroblasts , Hearing Loss/genetics
5.
Dokl Biol Sci ; 504(1): 82-84, 2022 Jun.
Article En | MEDLINE | ID: mdl-35821300

Coprolites of the hyena Pachycrocuta brevirostris from the Lower Pleistocene (Upper Villafranchian) of Taurida Cave (Crimea) were studied. One of the three hyena coprolites contained helminth eggs. These eggs were assigned to Toxocara sp. based on their size and morphology. Toxocariasis was evidently a very common infestation among extinct hyena species. The find of toxocara in P. brevirostris coprolite from the Taurida Cave is the earliest evidence of roundworm infestation in P. brevirostris.


Hyaenidae , Toxocara , Animals , Caves , Fossils
6.
Dokl Biol Sci ; 507(1): 265-268, 2022 Dec.
Article En | MEDLINE | ID: mdl-36781522

A maxillary fragment of the extinct hyena Chasmaporthetes lunensis (Del Campana, 1914) is described from the Early Pleistocene locality of the Taurida cave (Crimea, Late Villafranchian, 1.8-1.5 Ma). The species was a typical representative of the Villafranchian faunas of Eurasia. This is the first record of the genus Chasmaporthetes in the Pleistocene of Crimea.


Carnivora , Hyaenidae , Animals , Fossils , Caves , Maxilla
7.
Dokl Biol Sci ; 501(1): 182-186, 2021 Nov.
Article En | MEDLINE | ID: mdl-34962603

The cranial and mandibular remains of two adult individuals of Lynx issiodorensis (Croizet et Jobert, 1828) are described from the Early Pleistocene locality of the Taurida cave (Crimea, Late Villafranchian, 1.8-1.5 Ma). This lynx species was a typical representative of the Villafranchian fauna of the Eastern Mediterranean. A high craniological variability of L. issiodorensis is noted.


Carnivora , Felidae , Lynx , Animals , Caves , Fossils , Humans
8.
Dokl Biol Sci ; 500(1): 123-126, 2021 Sep.
Article En | MEDLINE | ID: mdl-34731375

A mandible fragment and four isolated teeth of the fossil foxes, Vulpes alopecoides (Del Campana, 1913), Vulpes cf. vulpes (Linnaeus, 1758) and Vulpes sp., are described from the Early Pleistocene locality of Taurida cave (Crimea, Late Villafranchian, 1.8-1.5 Ma). Based on the size and morphological features, a mandible fragment and two M1 are attributed to V. alopecoides. The structure of m1 of Vulpes cf. vulpes is similar to that of V. vulpes and V. alopecoides, but the size greatly exceeds the size limits for the latter species. Although m1 of Vulpes sp. fits the size of the lower carnassials of V. alopecoides, its morphology is definitely unique among the Early Pleistocene representatives of the genus Vulpes.


Carnivora , Tooth , Animals , Caves , Fossils , Foxes
9.
Transgenic Res ; 30(6): 709-725, 2021 12.
Article En | MEDLINE | ID: mdl-34409525

Duchenne muscular dystrophy (DMD) is a relatively widespread genetic disease which develops as a result of a mutation in the gene DMD encoding dystrophin. In this review, animal models of DMD are described. These models are used in preclinical studies to elucidate the pathogenesis of the disease or to develop effective treatments; each animal model has its own advantages and disadvantages. For instance, Caenorhabditis elegans, Drosophila melanogaster, and zebrafish (sapje) are suitable for large-scale chemical screening of large numbers of small molecules, but their disease phenotype differs from that of mammals. The use of larger animals is important for understanding of the potential efficacy of various treatments for DMD. While mdx mice have their advantages, they exhibit a milder disease phenotype compared to humans or dogs, making it difficult to evaluate the efficacy of new treatment for DMD. The disease in dogs and pigs is more severe and progresses faster than in mice, but it is more difficult to breed and obtain sufficient numbers of specimens in order to achieve statistically significant results. Moreover, working with large animals is also more labor-intensive. Therefore, when choosing the optimal animal model for research, it is worth considering all the goals and objectives.


Muscular Dystrophy, Duchenne , Animals , Caenorhabditis elegans/genetics , Disease Models, Animal , Dogs , Drosophila melanogaster/genetics , Mammals , Mice , Mice, Inbred mdx , Muscular Dystrophy, Duchenne/genetics , Muscular Dystrophy, Duchenne/pathology , Muscular Dystrophy, Duchenne/therapy , Swine/genetics , Zebrafish/genetics
10.
Dokl Biol Sci ; 496(1): 5-8, 2021 Jan.
Article En | MEDLINE | ID: mdl-33635481

The dental remains of a giant hyena Pachycrocuta brevirostris (Gervais, 1850) from the Early Pleistocene locality of the Taurida cave (Crimea, Late Villafranchian, 1.8-1.5 Ma) are described. This species was a typical representative of the Villafranchian fauna of the Eastern Mediterranean. The Taurida cave was occasionally used by hyenas and other carnivorans as a den and retreat.


Fossils/anatomy & histology , Hyaenidae/anatomy & histology , Paleontology , Animals , Carnivora/anatomy & histology , Caves , Russia
12.
Dokl Biol Sci ; 491(1): 35-38, 2020 Mar.
Article En | MEDLINE | ID: mdl-32483704

A fragment of a bear skull with partially preserved dentition is descibed from the Lower Pleistocene deposits of the Taurida cave (Crimea). The presence of P1-P3, the structure of P4, and sizes of the cheek teeth enable the identification of the specimen as Ursus etruscus Cuvier, 1823. The new find is the first in Crimea and the entire Russia and is of great interest due to rarity of this species in the Pleistocene of Eastern Europe.


Fossils , Skull/anatomy & histology , Ursidae , Animals , Caves , Russia , Tooth
13.
Mol Biol Rep ; 47(3): 2371-2379, 2020 Mar.
Article En | MEDLINE | ID: mdl-32036573

The majority of CRISPR-Cas9 methods for mutations correction are oriented on gene editing through homologous recombination that is normally restrained by non-homologous end joining (NHEJ). A recently identified protein TIRR can bind a 53BP1 protein, a key effector of NHEJ, and inhibit its recruitment to double-strand break loci. Several studies elucidated the molecular mechanisms of TIRR-53BP1 binding and established bidirectional role of TIRR in 53BP1 functions and stability. It was proved that overexpression of TIRR promotes the double-strand break repair through homologous recombination. All findings, which were described in the review, allow assuming TIRR as a suitable target for enhancing efficacy of genome editing through homology directed repair.


Carrier Proteins/genetics , Carrier Proteins/metabolism , Recombinational DNA Repair , Amino Acid Motifs , Animals , Binding Sites , Biomarkers , Carrier Proteins/chemistry , Chromatin/genetics , Chromatin/metabolism , DNA Breaks, Double-Stranded , DNA Repair , DNA-Binding Proteins/metabolism , Gene Editing , Histones/chemistry , Histones/metabolism , Humans , Protein Interaction Domains and Motifs , Protein Multimerization , RNA-Binding Proteins , Signal Transduction , Structure-Activity Relationship
14.
Dokl Biol Sci ; 495(1): 272-275, 2020 Nov.
Article En | MEDLINE | ID: mdl-33486662

This paper describes the maxillaries of adult specimens of saber-toothed cats Homotherium crenatidens (Fabrini, 1890) and Megantereon sp. from the Taurida Cave (Crimea, Late Villafranchian; age, 1.8-1.5 Ma). We discuss the morphometric variability in the morphology of the upper carnassials and the length of the С1-Р3 diastema.


Felidae/anatomy & histology , Fossils/anatomy & histology , Maxilla/anatomy & histology , Animals , Caves
15.
Dokl Biol Sci ; 487(1): 115-118, 2019 Jul.
Article En | MEDLINE | ID: mdl-31571079

The giant deer Arvernocerosverestchagini David, 1992, authochtonous species of the Early Pleistocene biota of North Black Sea coastal area, is discovered in Crimea. The giant deer was a member of fossil fauna of vertebrates from the Pleistocene deposits of Taurida karst cave. According to biochronological data, this fauna is dated to 1.8-1.5 Ma.


Deer/anatomy & histology , Fossils/anatomy & histology , Animals , Antlers/anatomy & histology , Caves
16.
Dokl Biol Sci ; 485(1): 40-43, 2019 Mar.
Article En | MEDLINE | ID: mdl-31197592

We describe a vertebrate assemblage from the Pleistocene deposits of the Taurida karst cave discovered in 2018 in central Crimea (Zuya village, Belogorsk raion). The assemblage is correlated with Late Villafranchian faunas of the Eastern Mediterranean and has an approximate age of 1.8-1.5 Ma.


Biodiversity , Caves , Fossils/anatomy & histology , Vertebrates/classification , Animals , Tooth/anatomy & histology , Vertebrates/anatomy & histology
17.
Dokl Biol Sci ; 480(1): 82-84, 2018 May.
Article En | MEDLINE | ID: mdl-30009345

In the late Miocene deposits in the Taralik-Cher locality (Tuva Republic), fossil remains of a giant mustelid of the genus Eomellivora Zdansky, 1924 have been found. This finding is the first reliable evidence of the Eomellivora inhabiting the modern Russia. Teeth of the Eomelliovra from Taralik-Cher are similar in size to those of E. wimani and E. piveteaui from the late Miocene in Eurasia. The morphology of teeth of the material from Tuva is most similar to that of E. ursogulo; therefore, it is considered a small form of Eomellivora ursogulo. The described finding expands the understanding of diversity, variability, and distribution of representatives of the genus Eomellivora in Asia during the late Miocene.


Fossils , Mustelidae/anatomy & histology , Mustelidae/classification , Mustelidae/physiology , Animals , Siberia
18.
Article Ru | MEDLINE | ID: mdl-30698565

Gene mutations occur with high frequency in children with mental retardation. Standard diagnostic methods, such as TMS, Sanger's sequencing of individual genes, MLPA analysis of deletions, and investigation of methylation status in Martin-Bell syndrome are not informative in the majority of cases that hampered further diagnostic efforts. Massive parallel sequencing (MPS) allowed physicians to continue diagnostic search in previously undiagnosed cases and to find molecular causes of disease. MPS permits to discover a large number of new genes and understand the pathogenesis of mental retardation and brain development more deeply. It became possible to perform prenatal and pre-implantation diagnostics. However, big data generate big problems with their interpretation the genetic counselor faces with. This review reflects the advantages and disadvantages of MPS. Different variants of MPS, including gene panels, whole exome and whole genome sequencing as well as sequencing of trios, are described. In addition, the authors discuss the difficulties of interpretation of the results and recommendations for obtaining the most accurate results.


Intellectual Disability , Child , Exome , Humans , Mutation , Sequence Deletion
19.
Mol Biol (Mosk) ; 51(4): 582-594, 2017.
Article Ru | MEDLINE | ID: mdl-28900076

The discovery of CRISPR/Cas9 brought a hope for having an efficient, reliable, and readily available tool for genome editing. CRISPR/Cas9 is certainly easy to use, while its efficiency and reliability remain the focus of studies. The review describes the general principles of the organization and function of Cas nucleases and a number of important issues to be considered while planning genome editing experiments with CRISPR/Cas9. The issues include evaluation of the efficiency and specificity for Cas9, sgRNA selection, Cas9 variants designed artificially, and use of homologous recombination and nonhomologous end joining in DNA editing.


Bacterial Proteins/genetics , CRISPR-Cas Systems , Clustered Regularly Interspaced Short Palindromic Repeats , Endonucleases/genetics , Gene Editing/methods , Genome , RNA, Guide, Kinetoplastida/genetics , Animals , Bacterial Proteins/metabolism , Base Pairing , Base Sequence , CRISPR-Associated Protein 9 , DNA End-Joining Repair , Endonucleases/metabolism , Humans , Protein Engineering , RNA, Guide, Kinetoplastida/metabolism , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Recombinational DNA Repair
20.
Arkh Patol ; 79(3): 27-33, 2017.
Article Ru | MEDLINE | ID: mdl-28631713

To paper describes a case of paucicellular anaplastic cancer in the presence of tall cell variant papillary thyroid carcinoma. Microscopic examination showed that the differentiated component of the tumor was composed of papillary structures with tall cells, the height of which exceeded 3-4 times the width. Its anaplastic component consisted of fibrous tissue with occasional spindle-shaped cells and focal lymphocytic infiltration to the extent of 70%. The spindle-shaped cells expressed cytokeratins, ß-catenin, p53, and vimentin. The tumor cells and lymphocytes showed an association with Epstein-Barr virus. Molecular genetic study of the tumor revealed the following mutations: BRAF p.Val600Glu (p.V600e was), HRAS p.His27His (p.H27H), PIK3CA p.Glu545Lys (p.E545K), TP53 p.Arg248Gln (p.R248Q).


Carcinoma, Papillary/pathology , Proto-Oncogene Proteins B-raf/genetics , Thyroid Carcinoma, Anaplastic/pathology , Thyroid Neoplasms/pathology , Carcinoma, Papillary/diagnostic imaging , Carcinoma, Papillary/genetics , Female , Humans , Middle Aged , Mutation , Thyroid Cancer, Papillary , Thyroid Carcinoma, Anaplastic/diagnostic imaging , Thyroid Carcinoma, Anaplastic/genetics , Thyroid Neoplasms/diagnostic imaging , Thyroid Neoplasms/genetics , Tomography, X-Ray Computed
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