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2.
Zootaxa ; 5256(3): 267-278, 2023 Mar 20.
Article in English | MEDLINE | ID: mdl-37045226

ABSTRACT

The genus Texoreddellia (Zygentoma; Nicoletiidae) is an important component of the cave-adapted fauna of Texas and northern Mexico. Specimens are often found in caves in central Texas. They are less common in western Texas and Coahuila, Mexico. We describe a new species, Texoreddellia chihuahuensis n. sp., from Chihuahua, Mexico, greatly expanding the range for the genus. The new species is found in an isolated karstic zone, far removed from the other cave forming areas inhabited by Texoreddellia spp. Phyletic analyses show the species to be the most basal and earliest to diverge within the genus. When compared to a calibrated molecular clock of the 16S rRNA for nicoleiids, its sequence supports a divergence of roughly 20 mya. Such a date is congruent with the geological origins of the Rio Grande and the Pecos River. Structural deformations coupled with long term erosion and downcutting through major river basins may have contributed in forming biological barriers that influenced speciation and isolation, especially between the western and eastern species of Texoreddellia.


Subject(s)
Insecta , Animals , Mexico , Texas , RNA, Ribosomal, 16S , Phylogeny
3.
Urology ; 175: 18-24, 2023 05.
Article in English | MEDLINE | ID: mdl-36868411

ABSTRACT

OBJECTIVE: To develop and evaluate a risk-based antibiotic prophylaxis protocol for patients undergoing transrectal prostate biopsy. METHODS: We created a risk-based protocol for antibiotic prophylaxis before transrectal prostate biopsy. Patients were screened for infection risk-factors with a self-administered questionnaire. The protocol was implemented from January 1, 2020 to March 31, 2020. We compared patient risk-factors, antibiotic regimens, and 30-day infection rates for patients undergoing transrectal prostate biopsies during the intervention and for a 3-month period before the intervention. RESULTS: There were 116 prostate biopsies in the preintervention group and 104 in the intervention group. Although there was no significant difference in the number of high-risk patients between the 2 groups (48% vs 55%; P = .33), the percentage of patients treated with augmented prophylaxis decreased from 74% to 45% (P = 0.03). The duration of antibiotic administration and the median number of doses prescribed also decreased significantly. Despite significant decreases in antibiotic use, there were no differences in infection rates (5% vs 5%; P = .90) or sepsis rates (1% vs 2%; P = .60). CONCLUSION: We developed a risk-based protocol for prophylactic antibiotics before prostate biopsy. The protocol was associated with less antibiotic use but did not lead to an increase in infectious complications.


Subject(s)
Anti-Bacterial Agents , Prostate , Male , Humans , Anti-Bacterial Agents/therapeutic use , Prostate/pathology , Antibiotic Prophylaxis/methods , Rectum , Biopsy/adverse effects , Biopsy/methods , Image-Guided Biopsy/methods
4.
Article in English | MEDLINE | ID: mdl-30533855

ABSTRACT

We report here the near-complete genome sequence of "Candidatus Spirobacillus cienkowskii," a spiral-shaped, red-pigmented uncultivated bacterial pathogen of Daphnia spp. The genome is 2.74 Mbp in size, has a GC content of 32.1%, and contains genes associated with bacterial motility and the production of carotenoids, which could explain the distinctive red color of hosts infected with this pathogen.

5.
J Pediatr ; 165(4): 727-31, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25039043

ABSTRACT

OBJECTIVE: To test the hypothesis that children and adults with a history of Kawasaki disease (KD) are more likely to have abnormal lipoprotein particle profiles that could place them at increased risk for developing atherosclerosis later in life. STUDY DESIGN: Fasting serum samples were obtained from 192 children and 63 adults with history of KD and 90 age-similar healthy controls. Lipoprotein particle concentrations and sizes were measured by nuclear magnetic resonance spectroscopy (LipoScience Inc, Raleigh, North Carolina), and serum was assayed for total cholesterol (TC), triglycerides, and high-density lipoprotein (HDL) cholesterol (HDL-C). Low-density lipoprotein (LDL) cholesterol was estimated using the Friedewald formula. Data were analyzed in a least-square means model, with adjustment for age and sex and with the use of Holm correction for multiple comparisons. RESULTS: Compared with respective control groups, both adult and pediatric subjects with KD had significantly lower mean very low-density lipoprotein-chylomicron particles, intermediate-density lipoproteins, triglycerides, and TC concentrations. Pediatric subjects with KD had significantly lower LDL particle and LDL cholesterol concentrations and lower mean TC/HDL-C ratio (P < .001). In contrast, the adult subjects with KD had significantly lower HDL particle, small HDL particle, and HDL-C concentrations (P < .001), but HDL-C was within normal range. CONCLUSIONS: Nuclear magnetic resonance lipoprotein particle analysis suggests that pediatric and adult subjects with KD, regardless of their aneurysm status, are no more likely than age-similar, healthy controls to have lipid patterns associated with increased risk of atherosclerosis.


Subject(s)
Chylomicrons/chemistry , Lipoproteins/blood , Mucocutaneous Lymph Node Syndrome/blood , Adolescent , Adult , Atherosclerosis/blood , Body Mass Index , Case-Control Studies , Child , Child, Preschool , Cholesterol, HDL/blood , Cholesterol, LDL/blood , Female , Follow-Up Studies , Humans , Lipoproteins/chemistry , Magnetic Resonance Spectroscopy , Male , Mucocutaneous Lymph Node Syndrome/therapy , Risk Factors , Young Adult
6.
Mol Cell ; 33(6): 679-91, 2009 Mar 27.
Article in English | MEDLINE | ID: mdl-19328063

ABSTRACT

Adaptation to endoplasmic reticulum (ER) stress depends on the activation of an integrated signal transduction pathway known as the unfolded protein response (UPR). Bax inhibitor-1 (BI-1) is an evolutionarily conserved ER-resident protein that suppresses cell death. Here we have investigated the role of BI-1 in the UPR. BI-1 expression suppressed IRE1alpha activity in fly and mouse models of ER stress. BI-1-deficient cells displayed hyperactivation of the ER stress sensor IRE1alpha, leading to increased levels of its downstream target X-box-binding protein-1 (XBP-1) and upregulation of UPR target genes. This phenotype was associated with the formation of a stable protein complex between BI-1 and IRE1alpha, decreasing its ribonuclease activity. Finally, BI-1 deficiency increased the secretory activity of primary B cells, a phenomenon regulated by XBP-1. Our results suggest a role for BI-1 in early adaptive responses against ER stress that contrasts with its known downstream function in apoptosis.


Subject(s)
Apoptosis Regulatory Proteins/metabolism , Apoptosis/physiology , Endoplasmic Reticulum/physiology , Endoribonucleases/metabolism , Membrane Proteins/metabolism , Protein Serine-Threonine Kinases/metabolism , Amino Acid Sequence , Animals , Apoptosis Regulatory Proteins/genetics , B-Lymphocytes/metabolism , Cells, Cultured , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Drosophila Proteins/genetics , Drosophila Proteins/metabolism , Drosophila melanogaster/metabolism , Endoribonucleases/genetics , Fibroblasts/cytology , Fibroblasts/metabolism , Humans , Immunoglobulin M/metabolism , Membrane Proteins/genetics , Mice , Mice, Knockout , Molecular Sequence Data , Protein Serine-Threonine Kinases/genetics , RNA Splicing , Regulatory Factor X Transcription Factors , Sequence Homology, Amino Acid , Transcription Factors/genetics , Transcription Factors/metabolism , X-Box Binding Protein 1
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