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1.
Clin Transl Oncol ; 23(10): 2163-2170, 2021 Oct.
Article in English | MEDLINE | ID: mdl-33928496

ABSTRACT

PURPOSE: PIM kinase is called proto-oncogene, but there are less research on PIM family in colon cancer. This study was designed to explore the prognosis of PIM3 in colon cancer. METHODS: In this study, we downloaded RNA-seq and clinical information of colon cancer from the Gene Expression Omnibus (GEO) database. Kaplan-Meier method was used for analyzing the impact of PIM3 on the survival of patients with colon cancer. Single-factor and multi-factor cox regression analysis were used for verifying the prognostic value of PIM3. Spearman correlation analysis was used for screening PIM3 related genes. Functional enrichment analysis was used for analyzing the biological functions and pathways in which PIM3 related genes may be involved. STRING online tools were used for building a co-expression network. Cytoscape was used for co-expression network visualization. RESULTS: Compared with the low expression group, the patients in the PIM3 high expression group lived longer time. Single-factor and multi-factor cox regression analysis indicated that PIM3 was an independent prognostic factor for colon cancer. Sixty-two PIM3 related genes were screened, and GO and KEGG enrichment analyses suggested that PIM3 related genes might be involved in the MAPK and WNT pathways. The co-expression network showed a strong correlation between PIM3 and MLKL, MYL5, PPP3R1 and other genes. CONCLUSIONS: PIM3 is an independent prognostic factor of colon cancer and may be a target for the diagnosis and treatment of colon cancer.


Subject(s)
Colonic Neoplasms/genetics , Colonic Neoplasms/mortality , Gene Expression Profiling , Protein Serine-Threonine Kinases/genetics , Proto-Oncogene Proteins/genetics , Calcineurin/genetics , Colonic Neoplasms/pathology , Databases, Genetic , Humans , Kaplan-Meier Estimate , Mitogen-Activated Protein Kinase Kinases/metabolism , Prognosis , Promyelocytic Leukemia Protein/genetics , Protein Kinases/genetics , Protein Serine-Threonine Kinases/physiology , Proto-Oncogene Proteins/physiology , Regression Analysis , Wnt Signaling Pathway
2.
Genet Mol Res ; 15(2)2016 May 13.
Article in English | MEDLINE | ID: mdl-27323030

ABSTRACT

Endophytes from Cephalotaxus hainanensis Li, an important source of anti-leukemia drugs, have not been widely explored. In this study, 265 endophytic fungal isolates from C. hainanensis Li were screened for antimicrobial activities against tilapia, banana, rice, and rape and for antitumor activities against human leukemia cell lines (K562, NB4, and HL-60). Diversity was also analyzed. The results showed that 17.7% of the endophytic fungi had antimicrobial activities against at least three different test microbes, and activity against Fusarium oxysporum RKY102 was the highest at 15.8%. Cytotoxicity against at least one tumor cell line tested was observed in 18.5% of the endophytic fungi; with the highest value of 10.6% against K562. The endophytic fungal strains also showed relatively high activities against K562, NB4, and HL-60 while relatively fewer strains were cytotoxic against the human hepatic Hep-G2 and colon LoVo cancer cell lines. Thirty endophytic fungal strains showed both high antimicrobial and antitumor activities. Moreover, the analyses of the diversity of the 30 highly active strains showed they belonged to 20 species from 14 genera, and this is the first report of endophytic fungi Albonectria rigidiuscula, Colletotrichum magnisporum, and Nemania diffusa being isolated from Cephalotaxus plants. These findings suggest that natural antibacterial products for humans and tilapia; antifungal compounds for rice, rape, and banana; and antitumor compounds for leukemia therapy could be isolated from fungal strains derived from C. hainanensis Li.


Subject(s)
Cephalotaxus/microbiology , Colletotrichum , Endophytes , Fusarium , Anti-Infective Agents , Antineoplastic Agents , Biological Products/chemistry , Biological Products/pharmacology , Cell Line, Tumor , HL-60 Cells , Hep G2 Cells , Humans , K562 Cells , Medicine, Chinese Traditional , Microbial Sensitivity Tests , Plant Leaves/microbiology
3.
Rev. bras. pesqui. méd. biol ; Braz. j. med. biol. res;48(3): 273-279, 03/2015. tab, graf
Article in English | LILACS | ID: lil-741259

ABSTRACT

The present study aimed to investigate visceral adipose tissue-specific serpin (vaspin) concentrations in serum and term placentas and relate these values to insulin resistance and lipid parameters in women with gestational diabetes mellitus (GDM). A total of 30 GDM subjects and 27 age-matched pregnant women with normal glucose tolerance (NGT, control) were included. Serum glucose, glycated hemoglobin (HbA1c), lipid profile, insulin, and vaspin were measured at the end of pregnancy, and homeostasis model of assessment-insulin resistance (HOMA-IR) values were calculated. Vaspin mRNA and protein levels in placentas were measured by real-time fluorescence quantitative reverse transcription polymerase chain reaction (RT-qPCR) and Western blotting, respectively. Serum vaspin levels were significantly lower in the GDM group than in controls (0.49±0.24 vs 0.83±0.27 ng/mL, respectively; P<0.01). Three days after delivery, serum vaspin levels were significantly decreased in subjects with GDM (0.36±0.13 vs 0.49±0.24 ng/mL, P<0.01). However, in the GDM group, serum vaspin levels were not correlated with the parameters evaluated. In contrast, in the control group, serum vaspin levels were positively correlated with triglycerides (TG; r=0.45, P=0.02) and very low-density lipoprotein cholesterol (VLDL-C; r=0.42, P=0.03). Placental mRNA vaspin (0.60±0.32 vs 0.68±0.32, P=0.46) and protein (0.30±0.08 vs 0.39±0.26; P=0.33) levels in the GDM group did not differ significantly from those in the control group, but were negatively correlated with neonatal birth weight in the GDM group (r=-0.48, P=0.03; r=-0.88; P<0.01). Our findings indicated that vaspin may be an important adipokine involved in carbohydrate and lipid metabolism and may also play a role in fetal development.


Subject(s)
Adult , Female , Humans , Male , Absenteeism , Anxiety Disorders/epidemiology , Depressive Disorder/epidemiology , Efficiency , Quality of Life , Severity of Illness Index , Surveys and Questionnaires
4.
Braz J Med Biol Res ; 48(3): 273-9, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25608237

ABSTRACT

The present study aimed to investigate visceral adipose tissue-specific serpin (vaspin) concentrations in serum and term placentas and relate these values to insulin resistance and lipid parameters in women with gestational diabetes mellitus (GDM). A total of 30 GDM subjects and 27 age-matched pregnant women with normal glucose tolerance (NGT, control) were included. Serum glucose, glycated hemoglobin (HbA1c), lipid profile, insulin, and vaspin were measured at the end of pregnancy, and homeostasis model of assessment-insulin resistance (HOMA-IR) values were calculated. Vaspin mRNA and protein levels in placentas were measured by real-time fluorescence quantitative reverse transcription polymerase chain reaction (RT-qPCR) and Western blotting, respectively. Serum vaspin levels were significantly lower in the GDM group than in controls (0.49 ± 0.24 vs 0.83 ± 0.27 ng/mL, respectively; P<0.01). Three days after delivery, serum vaspin levels were significantly decreased in subjects with GDM (0.36 ± 0.13 vs 0.49 ± 0.24 ng/mL, P<0.01). However, in the GDM group, serum vaspin levels were not correlated with the parameters evaluated. In contrast, in the control group, serum vaspin levels were positively correlated with triglycerides (TG; r=0.45, P=0.02) and very low-density lipoprotein cholesterol (VLDL-C; r=0.42, P=0.03). Placental mRNA vaspin (0.60 ± 0.32 vs 0.68 ± 0.32, P=0.46) and protein (0.30 ± 0.08 vs 0.39 ± 0.26; P=0.33) levels in the GDM group did not differ significantly from those in the control group, but were negatively correlated with neonatal birth weight in the GDM group (r=-0.48, P=0.03; r=-0.88; P<0.01). Our findings indicated that vaspin may be an important adipokine involved in carbohydrate and lipid metabolism and may also play a role in fetal development.


Subject(s)
Diabetes, Gestational/blood , Placenta/metabolism , Serpins/metabolism , Adult , Biomarkers/blood , Blood Glucose/analysis , Case-Control Studies , Diabetes, Gestational/metabolism , Female , Glycated Hemoglobin/analysis , Homeostasis , Humans , Insulin/blood , Lipids/blood , Pregnancy , Serpins/blood
5.
Genet Mol Res ; 13(3): 4956-66, 2014 Jul 04.
Article in English | MEDLINE | ID: mdl-25062483

ABSTRACT

Pattern recognition molecules play an important role in innate immunity by recognizing conserved molecular patterns that are present on the surface of invading microorganisms. In this study, a lipopolysaccharide and ß-1,3-glucan binding protein (LGBP) gene was cloned from the hard clam Meretrix meretrix (designated as Mm-LGBP) by the expressed sequence tags and rapid amplification of cDNA ends method. The cDNA was 1827 bp in length, consisting of a 71-bp 5'-terminal untranslated region, a 62-bp 3'UTR, and a 1734-bp open reading frame encoding a 577-amino acid polypeptide with an estimated molecular mass of 60.7 kDa and a theoretical isoelectric point of 5.56. Characteristic potential polysaccharide binding, cell adhesion, and glucanase motifs were identified in the Mm-LGBP, indicating that Mm-LGBP should be a new member of the LGBP family. Quantitative real-time polymerase chain reaction was developed to detect the mRNA expression level of Mm-LGBP in 6 different tissues. Higher-level mRNA expression of Mm-LGBP was detected in the gill and digestive gland tissues. The upregulation of Mm-LGBP mRNA after Vibrio anguillarum challenge showed that Mm-LGBP play a pivotal role in antibacterial immunity.


Subject(s)
Bivalvia/genetics , Lectins/genetics , Lipopolysaccharides/metabolism , beta-Glucans/metabolism , 3' Untranslated Regions , 5' Untranslated Regions , Amino Acid Motifs , Animals , Base Sequence , Bivalvia/classification , Bivalvia/immunology , Bivalvia/microbiology , Cloning, Molecular , Gene Expression Regulation , Lectins/chemistry , Lectins/immunology , Lipopolysaccharides/chemistry , Molecular Sequence Data , Molecular Weight , Open Reading Frames , Phylogeny , Protein Binding , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/immunology , Vibrio/pathogenicity , Vibrio/physiology , beta-Glucans/chemistry
6.
Genet Mol Res ; 10(4): 3331-7, 2011 Dec 05.
Article in English | MEDLINE | ID: mdl-22183943

ABSTRACT

Cytochrome P450 (CYP) 2C19 metabolizes arachidonic acid to biologically active epoxyeicosatrienoic acids, which strongly promote proliferation of cancer cells in vitro and in vivo. Knowing that smoking is the most important risk factor for laryngeal carcinoma, we examined the relationships between CYP2C19*3 polymorphism, smoking and laryngeal carcinoma in the Chinese Han population. In a Chinese Han case-control study of 300 laryngeal carcinoma patients and 300 healthy controls, we investigated polymorphism in the CYP2C19 gene by PCR-RFLP analysis. The CYP2C19*3 AG + AA genotype was significantly more prevalent in laryngeal carcinoma patients (6.67 vs 2.67%; P = 0.02). Multiple logistic regression analysis showed smoking (odds ratio (OR) = 6.353, 95% confidence interval (CI) = 4.413-9.144; P < 0.001) and alcohol consumption (OR = 2.607, 95%CI = 1.130-6.016; P = 0.025) as independent risk factors for laryngeal carcinoma; there was a significant interaction between CYP2C19*3 and smoking (OR = 17.842, 95%CI = 13.32-31.102; P = 0.009). We conclude that CYP2C19*3 polymorphism is significantly associated with laryngeal carcinoma in the Chinese Han population.


Subject(s)
Aryl Hydrocarbon Hydroxylases/genetics , Asian People/genetics , Ethnicity/genetics , Genetic Predisposition to Disease , Laryngeal Neoplasms/genetics , Polymorphism, Genetic , Smoking/genetics , China , Cytochrome P-450 CYP2C19 , Epistasis, Genetic , Female , Genetics, Population , Humans , Laryngeal Neoplasms/enzymology , Logistic Models , Male , Middle Aged , Risk Factors
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