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1.
Proc Natl Acad Sci U S A ; 117(45): 28183-28190, 2020 11 10.
Article in English | MEDLINE | ID: mdl-33109722

ABSTRACT

The idea that tropical forest and savanna are alternative states is crucial to how we manage these biomes and predict their future under global change. Large-scale empirical evidence for alternative stable states is limited, however, and comes mostly from the multimodal distribution of structural aspects of vegetation. These approaches have been criticized, as structure alone cannot separate out wetter savannas from drier forests for example, and there are also technical challenges to mapping vegetation structure in unbiased ways. Here, we develop an alternative approach to delimit the climatic envelope of the two biomes in Africa using tree species lists gathered for a large number of forest and savanna sites distributed across the continent. Our analyses confirm extensive climatic overlap of forest and savanna, supporting the alternative stable states hypothesis for Africa, and this result is corroborated by paleoecological evidence. Further, we find the two biomes to have highly divergent tree species compositions and to represent alternative compositional states. This allowed us to classify tree species as forest vs. savanna specialists, with some generalist species that span both biomes. In conjunction with georeferenced herbarium records, we mapped the forest and savanna distributions across Africa and quantified their environmental limits, which are primarily related to precipitation and seasonality, with a secondary contribution of fire. These results are important for the ongoing efforts to restore African ecosystems, which depend on accurate biome maps to set appropriate targets for the restored states but also provide empirical evidence for broad-scale bistability.


Subject(s)
Climate , Ecosystem , Forests , Grassland , Africa , Fires , Rain , Seasons , Trees , Tropical Climate
2.
Science ; 369(6508): 1245-1248, 2020 09 04.
Article in English | MEDLINE | ID: mdl-32883868

ABSTRACT

The biogeochemical silicon cycle influences global primary productivity and carbon cycling, yet changes in silicon sources and cycling during long-term development of terrestrial ecosystems remain poorly understood. Here, we show that terrestrial silicon cycling shifts from pedological to biological control during long-term ecosystem development along 2-million-year soil chronosequences in Western Australia. Silicon availability is determined by pedogenic silicon in young soils and recycling of plant-derived silicon in old soils as pedogenic pools become depleted. Unlike concentrations of major nutrients, which decline markedly in strongly weathered soils, foliar silicon concentrations increase continuously as soils age. Our findings show that the retention of silicon by plants during ecosystem retrogression sustains its terrestrial cycling, suggesting important plant benefits associated with this element in nutrient-poor environments.


Subject(s)
Plants/chemistry , Silicon/chemistry , Soil/chemistry , Australia , Plant Leaves/chemistry , Silicon/analysis
3.
Aliment Pharmacol Ther ; 45(4): 542-552, 2017 02.
Article in English | MEDLINE | ID: mdl-27995633

ABSTRACT

BACKGROUND: Maintenance anti-tumour necrosis factor-α (anti-TNFα) treatment for Crohn's disease is the standard of care for patients with an inadequate response to corticosteroids and immunomodulators. AIM: To compare the efficacy and safety of infliximab and adalimumab in clinical practice and assess the value of concomitant immunomodulator therapy. METHODS: We performed an observational cohort study in consecutive patients with Crohn's disease qualifying for anti-TNFα treatment in Australia and New Zealand between 2007 and 2011. Demographic and clinical data were prospectively recorded to identify independent factors associated with induction and maintenance of response to infliximab or adalimumab, or to either anti-TNFα therapy. RESULTS: Three hundred and twenty-seven patients (183 infliximab, 144 adalimumab) successfully applied for treatment. Eighty-nine percent responded in all groups and median maintenance of response was similar for the two agents. Concomitant immunomodulator with infliximab, but not adalimumab, demonstrated a significantly longer response overall (P = 0.002), and significantly fewer disease and treatment-related complications (P = 0.017). Corticosteroids at baseline, and/or in the preceding 12 months, were associated with a 9-13 times greater risk of disease flare during maintenance treatment as compared to no corticosteroids (P < 0.0001). Maintenance of response was similar in the anti-TNF naïve and anti-TNF experienced subgroups. CONCLUSIONS: In this large, real-life study, we demonstrate infliximab and adalimumab to have similar response characteristics. However, infliximab requires concomitant immunomodulator to achieve optimal maintenance of response comparable to adalimumab monotherapy. The results of this study will assist clinicians in further optimising patient care in their day-to-day clinical practice.


Subject(s)
Adalimumab/therapeutic use , Anti-Inflammatory Agents/therapeutic use , Crohn Disease/drug therapy , Crohn Disease/epidemiology , Gastrointestinal Agents/therapeutic use , Infliximab/therapeutic use , Adult , Antibodies, Monoclonal, Humanized/therapeutic use , Australia/epidemiology , Cohort Studies , Female , Humans , Immunologic Factors/therapeutic use , Male , Middle Aged , New Zealand/epidemiology , Prospective Studies , Treatment Outcome , Young Adult
4.
Heredity (Edinb) ; 113(1): 74-85, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24549110

ABSTRACT

The long generation time and large effective size of widespread forest tree species can result in slow evolutionary rate and incomplete lineage sorting, complicating species delimitation. We addressed this issue with the African timber tree genus Milicia that comprises two morphologically similar and often confounded species: M. excelsa, widespread from West to East Africa, and M. regia, endemic to West Africa. We combined information from nuclear microsatellites (nSSRs), nuclear and plastid DNA sequences, and morphological systematics to identify significant evolutionary units and infer their evolutionary and biogeographical history. We detected five geographically coherent genetic clusters using nSSRs and three levels of genetic differentiation. First, one West African cluster matched perfectly with the morphospecies M. regia that formed a monophyletic clade at both DNA sequences. Second, a West African M. excelsa cluster formed a monophyletic group at plastid DNA and was more related to M. regia than to Central African M. excelsa, but shared many haplotypes with the latter at nuclear DNA. Third, three Central African clusters appeared little differentiated and shared most of their haplotypes. Although gene tree paraphyly could suggest a single species in Milicia following the phylogenetic species concept, the existence of mutual haplotypic exclusivity and nonadmixed genetic clusters in the contact area of the two taxa indicate strong reproductive isolation and, thus, two species following the biological species concept. Molecular dating of the first divergence events showed that speciation in Milicia is ancient (Tertiary), indicating that long-living tree taxa exhibiting genetic speciation may remain similar morphologically.


Subject(s)
Biological Evolution , Genetic Speciation , Moraceae/anatomy & histology , Moraceae/genetics , Phylogeny , Africa , Base Sequence , Bayes Theorem , DNA Primers/genetics , Evolution, Molecular , Haplotypes/genetics , Microsatellite Repeats/genetics , Models, Genetic , Molecular Sequence Data , Multigene Family/genetics , Phylogeography , Sequence Analysis, DNA
5.
Commun Agric Appl Biol Sci ; 78(3): 657-63, 2013.
Article in English | MEDLINE | ID: mdl-25151843

ABSTRACT

Nowadays, environmental, health and economic concerns encourage reviewing our weed management in agriculture. Integrated pest management is one key element in the development of weed management strategies less dependent from herbicides. To reach this goal, impact of different methods of tillage (Combinations of stubble cultivator and moldboard plow) on biology and dynamic of wild chamomile populations was studied in experimental plots of experimental farm of Gembloux Agro-Bio Tech. In summer 2012, wild chamomile densities were significantly lower in plots tilled with a moldboard plow. The use of a stubble cultivator did not significantly affect M. chamomilla density. In addition, we found higher wheat yields in plowed plots, indicating that the decrease in M. chamomilla densities reduces competition for wheat. These results show well long run impact of plowing and his effect on densities of wild chamomile and the seedbank.


Subject(s)
Agriculture/methods , Matricaria/growth & development , Weed Control/methods , Plant Weeds/growth & development , Triticum/growth & development
6.
Commun Agric Appl Biol Sci ; 77(3): 363-8, 2012.
Article in English | MEDLINE | ID: mdl-23878991

ABSTRACT

Currently, economic, agronomic and environmental concerns lead to reduce the use of herbicides. Mechanical weeding can help to reach this objective. Dynamics and biology of wild chamomile (Matricaria chamomilla L.) populations were assessed as well as dynamic of winter wheat (Triticum aestivum L.) for four level of application of a weeder-harrow (0, 1, 2, 3 treatment(s)). After each treatment, an effect of mechanical weeding on wild chamomile density was observed. Density of wild chamomile decreased significantly with intensification of mechanical weeding. A third treatment allowed eliminating late emerged plants.


Subject(s)
Agriculture/methods , Matricaria/drug effects , Plant Weeds , Triticum/physiology
7.
Commun Agric Appl Biol Sci ; 76(3): 485-90, 2011.
Article in English | MEDLINE | ID: mdl-22696956

ABSTRACT

Currently, economic, agronomic and environmental concerns, lead to reduce use of herbicides. This reduction can be help by cultural measures like delay of the sowing date. Four sowing dates of winter wheat from 15th of October to 26th of November were tested. Dynamic of black-grass (Alopecurus myosuroides Huds.) populations and their reproduction rate were assessed as well as dynamic of winter wheat for each date. Delay of sowing could significantly reduce reproduction rate of black-grass. It was shown that the emergence rate (pl/m2), but also number of ears per plant and number of seeds per ear of black-grass decreased significantly with the sowing date. This reduction of seeds production already is from sixty per cent for a delay of two weeks sowing.


Subject(s)
Agriculture/methods , Plant Weeds/growth & development , Poaceae/growth & development , Triticum/growth & development , Weed Control/methods , Herbicides/pharmacology , Poaceae/drug effects , Seasons
8.
Plant Biol (Stuttg) ; 12(1): 215-23, 2010 Jan.
Article in English | MEDLINE | ID: mdl-20653904

ABSTRACT

Interspecific hybridization can be a driving force for evolutionary processes during plant invasions, by increasing genetic variation and creating novel gene combinations, thereby promoting genetic differentiation among populations of invasive species in the introduced range. We examined regional genetic structure in the invasive Fallopia complex, consisting of F. japonica var. japonica, F. sachalinensis and their hybrid F. x bohemica, in seven regions in Germany and Switzerland using RAPD analysis and flow cytometry. All individuals identified as F. japonica var. japonica had the same RAPD phenotype, while F. sachalinensis (11 RAPD phenotypes for 11 sampled individuals) and F. x bohemica (24 RAPD phenotypes for 32 sampled individuals) showed high genotypic diversity. Bayesian cluster analysis revealed three distinct genetic clusters. The majority of F. x bohemica individuals were assigned to a unique genetic cluster that differed from those of the parental species, while the other F. x bohemica individuals had different degrees of admixture to the three genetic clusters. At the regional scale, the occurrence of male-fertile F. sachalinensis coincided with the distribution of F. x bohemica plants showing a high percentage of assignment to both parental species, suggesting that they originated from hybridization between the parental species. In contrast, in regions where male-fertile F. sachalinensis were absent, F. x bohemica belonged to the non-admixed genetic group, indicating multiple introductions of hybrids or sexual reproduction among hybrids. We also found regional differentiation in the gene pool of F. x bohemica, with individuals within the same region more similar to each other than to individuals from different regions.


Subject(s)
Chimera , Hybridization, Genetic , Polygonaceae/genetics , Random Amplified Polymorphic DNA Technique , Bayes Theorem , Cluster Analysis , DNA, Plant/genetics , Genetic Variation , Genotype , Geography , Germany , Phenotype , Polygonaceae/classification , Sequence Analysis, DNA , Switzerland
9.
Mol Ecol ; 18(21): 4398-408, 2009 Nov.
Article in English | MEDLINE | ID: mdl-19793352

ABSTRACT

In this study, we analysed spatial genetic structure (SGS) patterns and estimated dispersal distances in Milicia excelsa (Welw.) C.C. Berg (Moraceae), a threatened wind-pollinated dioecious African tree, with typically low density (approximately 10 adults/km(2)). Eight microsatellite markers were used to type 287 individuals in four Cameroonian populations characterized by different habitats and tree densities. Differentiation among populations was very low. Two populations in more open habitat did not display any correlation between genetic relatedness and spatial distance between individuals, whereas significant SGS was detected in two populations situated under continuous forest cover. SGS was weak with a maximum S(p)-statistic of 0.006, a value in the lower quartile of SGS estimates for trees in the literature. Using a stepwise approach with Bayesian clustering methods, we demonstrated that SGS resulted from isolation by distance and not colonization by different gene pools. Indirect estimates of gene dispersal distances ranged from sigma(g) = 1 to 7.1 km, one order of magnitude higher than most estimates found in the literature for tropical tree species. This result can largely be explained by life-history traits of the species. Milicia excelsa exhibits a potentially wide-ranging wind-mediated pollen dispersal mechanism as well as very efficient seed dispersal mediated by large frugivorous bats. Estimations of gene flow suggested no major risk of inbreeding because of reduction in population density by exploitation. Different strategy of seed collection may be required for reforestation programmes among populations with different extent of SGS.


Subject(s)
Gene Flow , Genetic Variation , Genetics, Population , Moraceae/genetics , Bayes Theorem , Cluster Analysis , DNA, Plant/genetics , Ecosystem , Gene Pool , Genotype , Microsatellite Repeats , Pollination , Population Density , Sequence Analysis, DNA , Trees/genetics , Wind
10.
J Evol Biol ; 22(5): 917-26, 2009 May.
Article in English | MEDLINE | ID: mdl-21462393

ABSTRACT

Population differentiation of alien invasive plants within their non-native range has received increasingly more attention. Common gardens are typically used to assess the levels of genotypic differentiation among populations.However, in such experiments, environmental maternal effects can influence phenotypic variation among individuals if seed sources are collected from field populations under variable environmental regimes. In the present study, we investigated the causes of an altitudinal cline in an invasive plant. Seeds were collected from Senecio inaequidens (Asteraceae) populations along an altitudinal gradient in southern France. In addition, seeds from the same populations were generated by intra-population crossings in a climatic chamber. The two seed lots were grown in a common garden in Central Belgium to identify any evidence of environmentally induced maternal effects and / or an altitudinal cline in a suite of life-history traits. Results failed to detect any environmental maternal effects. However, an altitudinal cline in plant height and aboveground biomass was found to be independent of the maternal environment.


Subject(s)
Altitude , Demography , Environment , Phenotype , Senecio/growth & development , Senecio/genetics , Analysis of Variance , Belgium , Crosses, Genetic , France , Seeds/growth & development
12.
Plant Biol (Stuttg) ; 10(6): 684-93, 2008 Nov.
Article in English | MEDLINE | ID: mdl-18950425

ABSTRACT

We investigated variations in genetic diversity and plant fitness in a rare endemic metallophyte of calamine soils, Viola calaminaria, in relation to population size, population connectivity and population history in order to evaluate and discuss potential conservation strategies for the species. Mean population genetic diversity (H(s) = 0.25) of V. calaminaria was similar to endemic non-metallophyte taxa. Twenty-one per cent of the genetic variation was partitioned among populations and a low (9%) but significant differentiation was found among geographical regions. Our results did not support the hypothesis that the acquisition of metal tolerance may result in reduced genetic diversity, and suggested that strict metallophytes do not exhibit higher inter-population differentiation resulting from scattered habitats. There were no relationships between population genetic diversity and population size. Significant correlations were found between plant fitness and (i) population size and (ii) connectivity index. Recently-founded populations exhibited the same level of genetic diversity as ancient populations and also possessed higher plant fitness. There was no indication of strong founder effects in recently-established populations. The results suggest that the creation of habitats through human activities could provide new opportunities for conservation of this species.


Subject(s)
Ecosystem , Genetic Variation , Genetics, Population , Viola/genetics , Analysis of Variance , Conservation of Natural Resources , DNA, Plant/genetics , Ecology , Population Density , Population Dynamics , Random Amplified Polymorphic DNA Technique , Seeds/physiology , Viola/physiology
13.
Am J Bot ; 87(12): 1882-9, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11118425

ABSTRACT

Polyploidy has been important in the evolution of angiosperms and may significantly affect population genetic diversity and structure. Nineteen isoenzyme loci were studied in diploid and tetraploid populations of Vaccinium oxycoccos (Ericaceae), and the results are compared with data previously reported for the related V. macrocarpon. Diploid V. oxycoccos and V. macrocarpon were readily discriminated based on their allozymic variation. No evidence for fixed heterozygosity was found in tetraploid V. oxycoccos. In contrast, all polymorphic loci exhibited both balanced and unbalanced heterozygotes, with some individuals exhibiting a pattern consistent with the presence of three alleles. These results support an autopolyploid origin for tetraploid V. oxycoccos. However, tetraploid V. oxycoccos possessed a suite of alleles not found in diploid V. oxycoccos; half of these alleles were shared with V. macrocarpon. This suggests that autotetraploid V. oxycoccos may have undergone hybridization with V. macrocarpon or that the autotetraploid retained the genetic variation present in an ancestral diploid species. Following theoretical expectations, proportion of polymorphic loci, mean number of alleles, and observed heterozygosity were significantly higher for the autotetraploid than for the diploid. Mean inbreeding (F(IS)) was similar for diploid and tetraploid V. oxycoccos. The latter exhibited population differentiation (F(ST)) exceeding both diploid species.

14.
Heredity (Edinb) ; 82 Pt 4: 432-40, 1999 Apr.
Article in English | MEDLINE | ID: mdl-10383662

ABSTRACT

We investigated the spatial genetic structure within and between two plots of Calluna vulgaris and the extent to which the soil seed bank differed genetically from adults at seven allozyme loci. Averaged over the two plots, the seed bank and adult populations contained very similar levels of genetic diversity. Moreover, seeds contained in a single soil core (100 cm3) exhibited similar mean allozyme diversity to the surrounding adult population, indicating that the seed bank preserves genetic diversity at a very local scale. Few differences in allelic frequencies were found between the seed bank and its surrounding adult population in each plot. Mean GST indicated a lack of differentiation between the two plots at adult (GST = 0.008) and seed bank (GST = 0.002) stages. Low interplot differentiation is consistent with the outcrossing mating system of the population (tm = 0.91 in one plot) and its history of human disturbance. In contrast, spatial autocorrelation analysis of adults indicated a genetic structure at a very local scale, with positive autocorrelation for all alleles below 2 m in one plot and with a pattern of positive autocorrelation below 8 m in the two plots. Current limitation to seed dispersal rather than spatial extension of clones is thought to be responsible for local genetic structure.

15.
Heredity (Edinb) ; 82 (Pt 6): 654-60, 1999 Jun.
Article in English | MEDLINE | ID: mdl-10383687

ABSTRACT

Recent fragmentation of populations as well as historical postglacial recolonization may have significantly affected the population genetic diversity of temperate plant species. Regional allozymic variability was measured at seven loci within and among 12 populations of Calluna vulgaris in the previously glaciated region of Scotland. These results were compared with existing data on south-western continental populations. Low genetic differentiation (FST = 0.024) and lack of consistent geographical pattern were found at the regional level among Scottish populations, implying a high rate of gene flow (Nm = 10.2), probably favoured by the nearly continuous range of C. vulgaris across Scotland and characteristics of the Scottish environment. Scottish populations possessed lower mean allozymic diversity (PLP = 40.48, A = 1.95, He = 0.133) than populations from all the continental regions investigated previously. Belgian populations were genetically more closely related to Scottish than to other continental populations. These last two findings are interpreted with regard to the evolutionary history of the species revealed by palynological data.

16.
Br J Psychiatry ; 175: 28-33, 1999 Jul.
Article in English | MEDLINE | ID: mdl-10621765

ABSTRACT

BACKGROUND: The incidence rate for broad schizophrenia among second-generation African-Caribbean people in the United Kingdom has been reported as high. Ethnicity, migration and psychosocial stressors have been suggested as causal factors. AIMS: To determine the incidence of schizophrenia for the whole population of Barbados using an identical methodology to two previous studies in Trinidad (Bhugra et al, 1996) and London (Bhugra et al, 1997). METHOD: A 12-month study of all persons in the 18-54-year age group presenting with a psychosis for the first time was carried out on the population of Barbados. Information was collected using World Health Organization screening and measurement instruments. RESULTS: On an island of just over a quarter of a million, 40 out of the 53 patients that met the inclusion criteria were categorised as S+ (narrow) schizophrenia, giving an incidence rate of 2.8/10,000 (95% CI 1.97-3.7). The incidence rate for broad schizophrenia was calculated at 3.2/10,000 (95% CI 2.3-4.1), which is significantly lower than the comparable rate for London's African-Caribbeans of 6.6/10,000 (95% CI 4.5-8.7). CONCLUSIONS: The very high rate for broad schizophrenia among African-Caribbean people in the UK is probably due to environmental factors.


Subject(s)
Schizophrenia/epidemiology , Adolescent , Adult , Barbados/epidemiology , Barbados/ethnology , Female , Humans , Incidence , London/epidemiology , Male , Middle Aged , Patient Acceptance of Health Care/statistics & numerical data , Risk Factors , Schizophrenia/ethnology , Schizophrenia/therapy , Socioeconomic Factors
17.
New Phytol ; 137(2): 325-334, 1997 Oct.
Article in English | MEDLINE | ID: mdl-33863188

ABSTRACT

Genetic diversity, population genetic structure and gene flow in Calluna vulgaris (L.) Hull were assessed by means of seven allozyme loci scored in 18 populations from the South-Western area of the species' range. Genetic diversity was lower (HT = 0.20) than reported for long-lived widespread species but was characterized by a high number of alleles per locus (5.60 at the species level) of which more than 70% were rare. More than 95% of genetic variation was found at the intrapopulation level (GST = 0.047). High levels of past gene flow were inferred, based on the allozyme data (Nm = 5.2 from GST . Nm = 10.2 from the 'private allele' method). Calluna vulgaris exhibited several geographic patterns of genetic variation. Both cluster analysis, constructed with various genetic distances and principal components analysis showed that Spanish and Pyrenean populations were clearly different from those collected in the Massif Central and Belgium. Also, a trend for decreasing genetic diversity towards Northern populations was detected. These patterns might be related to the post-glacial history of Calluna. In addition, it is shown that isolation by distance has played a role in the geographic shaping of genetic variation in this species.

18.
Hosp Community Psychiatry ; 39(9): 980-5, 1988 Sep.
Article in English | MEDLINE | ID: mdl-3215648

ABSTRACT

The activities of a multidisciplinary team of mental health professionals during their initial year of work to upgrade the mental health system in the English-speaking Caribbean nation of Grenada are described. Improvement of services at the islands only psychiatric hospital received top priority. The team helped Grenadian staff to sharpen basic techniques of active treatment, which included assessment of psychiatric symptoms, development of treatment plans, and intervention with patients. Maintenance of medical records was improved, procedures for medication and seclusion were standardized, weekly ward rounds were routinized, and regular staff meetings were urged. Among the obstacles faced by the team in implementing these changes were staffs delayed acceptance of collaborative interdisciplinary team-work, as well as shortages of money and personnel.


Subject(s)
Mental Disorders/therapy , Mental Health Services/organization & administration , National Health Programs/organization & administration , Community Mental Health Services/organization & administration , Hospitals, Psychiatric/organization & administration , Humans , Medical Missions , West Indies
19.
West Indian Med J ; 36(2): 91-4, 1987 Jun.
Article in English | MEDLINE | ID: mdl-3673060
20.
West Indian med. j ; 36(2): 91-4, June 1987. tab
Article in English | LILACS | ID: lil-70693

ABSTRACT

The suicide rate in Barbados during 1984 was found to be 4.0 per hundred thousand. This seems to be in the upper range for the Caribbean region but still low when compared with the more developed countries. The findings for 1984 of an equal number of male and female suicides is very unusual for Barbados. A follow-up study is therefore indicated


Subject(s)
Humans , Male , Suicide/epidemiology , Barbados
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