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1.
Int J Genomics ; 2015: 501617, 2015.
Article in English | MEDLINE | ID: mdl-26064873

ABSTRACT

Population substructure is a well-known confounder in population-based case-control genetic studies, but its impact in family-based studies is unclear. We performed population substructure analysis using extended families of admixed population to evaluate power and Type I error in an association study framework. Our analysis shows that power was improved by 1.5% after principal components adjustment. Type I error was also reduced by 2.2% after adjusting for family substratification. The presence of population substructure was underscored by discriminant analysis, in which over 92% of individuals were correctly assigned to their actual family using only 100 principal components. This study demonstrates the importance of adjusting for population substructure in family-based studies of admixed populations.

2.
Allergy ; 70(8): 1028-32, 2015 Aug.
Article in English | MEDLINE | ID: mdl-26009928

ABSTRACT

The pathogenesis of asthma in the context of excess body weight may be distinct from asthma that develops in normal weight children. The study's objective was to explore the biology of asthma in the context of obesity and normal weight status using genetic methodologies. Associations between asthma and SNPs in 49 genes were assessed, as well as, interactions between SNPs and overweight status in child participants of the Greater Cincinnati Pediatric Clinic Repository. Asthma was significantly associated with weight (OR = 1.38; P = 0.037). The number of genes and the magnitude of their associations with asthma were notably greater when considering overweight children alone vs normal weight and overweight children together. When considering weight, distinct sets of asthma-associated genes were observed, many times with opposing effects. We demonstrated that the underlying heterogeneity of asthma is likely due in part to distinct pathogenetic pathways that depend on preceding/comorbid overweight and/or allergy. It is therefore important to consider both obesity and asthma when conducting studies of asthma.


Subject(s)
Asthma/epidemiology , Asthma/genetics , Overweight/epidemiology , Overweight/genetics , Adolescent , Age Distribution , Asthma/diagnosis , Body Mass Index , Child , Child, Preschool , Cohort Studies , Female , Genomics , Hospitals, Pediatric , Humans , Incidence , Male , Overweight/diagnosis , Pediatric Obesity/diagnosis , Pediatric Obesity/epidemiology , Pediatric Obesity/genetics , Reference Values , Risk Assessment , Sex Distribution , Signal Transduction
3.
Pharmacogenomics J ; 15(5): 436-42, 2015 Oct.
Article in English | MEDLINE | ID: mdl-25558980

ABSTRACT

Opioid effects are potentiated by cannabinoid agonists including anandamide, an endocannabinoid. Inter-individual variability in responses to opioids is a major clinical problem. Multiple deaths and anoxic brain injuries occur every year because of opioid-induced respiratory depression (RD) in surgical patients and drug abusers of opioids and cannabinoids. This study aimed to determine specific associations between genetic variants of fatty acid amide hydrolase (FAAH) and postoperative central opioid adverse effects in children undergoing tonsillectomy. This is a prospective genotype-blinded observational study in which 259 healthy children between 6 and 15 years of age who received standard perioperative care with a standard anesthetic and an intraoperative dose of morphine were enrolled. Associations between frequent polymorphisms of FAAH and central postoperative opioid adverse effects including, RD, postoperative nausea and vomiting (PONV) and prolonged stay in Post Anesthesia Recovery Room (postoperative anesthesia care unit, PACU) due to RD and PONV were analyzed. Five specific FAAH single nucleotide polymorphisms (SNPs) had significant associations with more than twofold increased risk for refractory PONV (adjusted P<0.0018), and nominal associations (P<0.05) with RD and prolonged PACU stay in white children undergoing tonsillectomy. The FAAH SNP, rs324420, is a missense mutation with altered FAAH function and it is linked with other FAAH SNPs associated with PONV and RD in our cohort; association between PONV and rs324420 was confirmed in our extended cohort with additional 66 white children. Specific FAAH polymorphisms are associated with refractory PONV, opioid-related RD, and prolonged PACU stay due to opioid adverse effects in white children undergoing tonsillectomy.


Subject(s)
Amidohydrolases/genetics , Analgesics, Opioid/adverse effects , Opioid-Related Disorders/genetics , Tonsillectomy/adverse effects , Adolescent , Analgesics, Opioid/administration & dosage , Arachidonic Acids/administration & dosage , Arachidonic Acids/adverse effects , Cannabinoids/agonists , Child , Drug Users , Drug-Related Side Effects and Adverse Reactions/genetics , Drug-Related Side Effects and Adverse Reactions/pathology , Endocannabinoids/administration & dosage , Endocannabinoids/adverse effects , Female , Genetic Association Studies , HapMap Project , Humans , Male , Opioid-Related Disorders/drug therapy , Opioid-Related Disorders/pathology , Polymorphism, Single Nucleotide , Polyunsaturated Alkamides/administration & dosage , Polyunsaturated Alkamides/adverse effects
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