ABSTRACT
We analyze a mean-field model for mixtures involving biaxial nematogens and dipolar nanoparticles, taking into account not only orientational and isotropic pair interactions between nematogens but also orientational nematogen-nanoparticle interactions. We determine bulk equilibrium phase diagrams for a wide range of interaction strengths, identifying in each case the effect of the nanoparticles on the stability of nematic phases and on the appearance of multicritical points. Special attention is given to the limit of a low concentration of nanoparticles, in which their effect on the temperatures of both the first-order uniaxial-isotropic and the continuous biaxial-uniaxial transitions is investigated in detail.
ABSTRACT
We employ a lattice-gas extension of the Maier-Saupe model with discrete orientation states to study the phase behavior of a statistical model for biaxial nematogenic units in mean-field theory. The phase behavior of the system is investigated in terms of the strength of isotropic interaction between anisotropic objects, as well as the degree of biaxiality and the concentration of those units. We obtain phase diagrams with isotropic phases and stable biaxial and uniaxial nematic structures, various phase coexistences, many types of critical and multicritical behaviors, such as ordinary vapor-liquid critical points, critical end points, and tricritical points, and distinct Landau-like multicritical points. Our results widen the possibilities of relating the phenomenological coefficients of the Landau-de Gennes expansion to microscopic parameters, allowing an improved interpretation of theoretical fittings to experimental data.
ABSTRACT
Developing a comprehensive and reliable taxonomy for the Colletotrichum gloeosporioides species complex will require adopting data standards on the basis of an understanding of how methodological choices impact morphological evaluations and phylogenetic inference. We explored the impact of methodological choices in a morphological and molecular evaluation of Colletotrichum species associated with banana in Brazil. The choice of alignment filtering algorithm has a significant impact on topological inference and the retention of phylogenetically informative sites. Similarly, the choice of phylogenetic marker affects the delimitation of species boundaries, particularly if low phylogenetic signal is confounded with strong discordance, and inference of the species tree from multiple-gene trees. According to both phylogenetic informativeness profiling and Bayesian concordance analyses, the most informative loci are DNA lyase (APN2), intergenic spacer (IGS) between DNA lyase and the mating-type locus MAT1-2-1 (APN2/MAT-IGS), calmodulin (CAL), glyceraldehyde-3-phosphate dehydrogenase (GAPDH), glutamine synthetase (GS), ß-tubulin (TUB2), and a new marker, the intergenic spacer between GAPDH and an hypothetical protein (GAP2-IGS). Cornmeal agar minimizes the variance in conidial dimensions compared with potato dextrose agar and synthetic nutrient-poor agar, such that species are more readily distinguishable based on phenotypic differences. We apply these insights to investigate the diversity of Colletotrichum species associated with banana anthracnose in Brazil and report C. musae, C. tropicale, C. theobromicola, and C. siamense in association with banana anthracnose. One lineage did not cluster with any previously described species and is described here as C. chrysophilum.
Subject(s)
Biodiversity , Colletotrichum/classification , Genotyping Techniques/methods , Microbiological Techniques/methods , Microscopy/methods , Musa/microbiology , Brazil , Colletotrichum/genetics , Colletotrichum/isolation & purification , Colletotrichum/physiology , Fungal Proteins/genetics , Genes, Fungal , PhylogenyABSTRACT
Cholecalciferol, vitamin D3, was found to isomerize to 5,6-trans-vitamin-D3 with a quantum yield of 0.15 ± 0.01 in air-saturated 7/3 tert-butyl alcohol/water (v/v) at 25 °C, increasing to 0.32 ± 0.02 in the absence of oxygen, through quenching of triplet excited state flavin mononucleotide, FMN, rather than becoming oxidized. The quenching was found by laser flash photolysis to have a rate constant of 1.4 × 10(8) L mol(-1) s(-1) in 7/3 tert-butyl alcohol/water (v/v) at 25 °C, assigned to energy transfer from (3)FMN* to form a reactive vit.D3 diradical. vit.D3 forms a 1/1 precomplex with FMN by hydrophobic stacking with ΔH° = -36 ± 7 kJ mol(-1) and ΔS° = -4 ± 3 J mol(-1) K(-1), as shown by single photon counting fluorescence spectroscopy and steady-state fluorescence spectroscopy. Both ground-state precomplex formation and excited-state energy transfer seem important for vit.D3 protection against flavin-sensitized photooxidation of nutrients in food and biological systems.
Subject(s)
Cholecalciferol/chemistry , Flavins/chemistry , Energy Transfer/radiation effects , Isomerism , Kinetics , Light , Oxidation-Reduction/radiation effects , PhotochemistryABSTRACT
Four new secondary metabolites, giovaninones A-D (1-4), were isolated from an ethyl acetate extract of a culture of a marine-derived Streptomyces strain designated SS99BA-2. Chemical analysis was completely conducted in a coupled automated LC-SPE system with the use of a cryogenic NMR probehead and HRMS. The application of this system to identify, purify and elucidate all the structures is described.
Subject(s)
Pyrazines/chemistry , Seawater/microbiology , Streptomyces/metabolism , Brazil , Magnetic Resonance Spectroscopy , Molecular Structure , Pyrazines/isolation & purification , Pyrazines/metabolism , Secondary Metabolism , Streptomyces/chemistry , Streptomyces/genetics , Streptomyces/isolation & purificationABSTRACT
Lupulones, hops ß-acids, are one of the main constituents of the hops resin and have an important contribution to the overall bacteriostatic activity of hops during beer brewing. The use of lupulones as natural alternatives to antibiotics is increasing in the food industry and also in bioethanol production. However, lupulones are easy oxidizable and have been shown to be very reactive toward 1-hydroxyethyl radical with apparent bimolecular rate constants close to diffusion control k = 2.9 × 10(8) and 2.6 × 10(8) L mol(-1) s(-1) at 25.0 ± 0.2 °C in ethanol-water solution (10% of ethanol (v/v)) as probed by EPR and ESI-IT-MS/MS spin-trapping competitive kinetics, respectively. The free energy change for an electron-transfer mechanism is ΔG° = 106 kJ/mol as calculated from the oxidation peak potential experimentally determined for lupulones (1.1 V vs NHE) by cyclic voltammetry and the reported reduction potential for 1-hydroxyethyl radical. The major reaction products identified by LC-ESI-IT-MS/MS and ultrahigh-resolution accurate mass spectrometry (orbitrap FT-MS) are hydroxylated lupulone derivatives and 1-hydroxyethyl radical adducts. The lack of pH dependence for the reaction rate constant, the calculated free energy change for electron transfer, and the main reaction products strongly suggest the prenyl side chains at the hops ß-acids as the reaction centers rather than the ß,ß'-triketone moiety.
Subject(s)
Acids/chemistry , Ethanol/chemistry , Humulus/chemistry , Terpenes/chemistry , Electrochemistry , KineticsABSTRACT
An analytical procedure for the separation and quantification of ethyl acetate, ethyl butyrate, ethyl hexanoate, ethyl lactate, ethyl octanoate, ethyl nonanoate, ethyl decanoate, isoamyl octanoate, and ethyl laurate in cachaca, rum, and whisky by direct injection gas chromatography-mass spectrometry was developed. The analytical method is simple, selective, and appropriated for the determination of esters in distilled spirits. The limit of detection ranged from 29 (ethyl hexanoate) to 530 (ethyl acetate) microg L(-1), whereas the standard deviation for repeatability was between 0.774% (ethyl hexanoate) and 5.05% (isoamyl octanoate). Relative standard deviation values for accuracy vary from 90.3 to 98.5% for ethyl butyrate and ethyl acetate, respectively. Ethyl acetate was shown to be the major ester in cachaca (median content of 22.6 mg 100 mL(-1) anhydrous alcohol), followed by ethyl lactate (median content of 8.32 mg 100 mL(-1) anhydrous alcohol). Cachaca produced in copper and hybrid alembic present a higher content of ethyl acetate and ethyl lactate than those produced in a stainless-steel column, whereas cachaca produced by distillation in a stainless-steel column present a higher content of ethyl octanoate, ethyl decanoate, and ethyl laurate. As expected, ethyl acetate is the major ester in whiskey and rum, followed by ethyl lactate for samples of rum. Nevertheless, whiskey samples exhibit ethyl lactate at contents lower or at the same order of magnitude of the fatty esters.