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1.
Sci Total Environ ; 893: 164658, 2023 Oct 01.
Article in English | MEDLINE | ID: mdl-37321511

ABSTRACT

As motivation to address environmental dissemination of antimicrobial resistance (AMR) is mounting, there is a need to characterize mechanisms by which AMR can propagate under environmental conditions. Here we investigated the effect of temperature and stagnation on the persistence of wastewater-associated antibiotic resistance markers in riverine biofilms and the invasion success of genetically-tagged Escherichia coli. Biofilms grown on glass slides incubated in-situ downstream of a wastewater treatment plant effluent discharge point were transferred to laboratory-scale flumes fed with filtered river water under potentially stressful temperature and flow conditions: recirculation flow at 20 °C, stagnation at 20 °C, and stagnation at 30 °C. After 14 days, quantitative PCR and amplicon sequencing were used to quantify bacteria, biofilms diversity, resistance markers (sul1, sul2, ermB, tetW, tetM, tetB, blaCTX-M-1, intI1) and E. coli. Resistance markers significantly decreased over time regardless of the treatment applied. Although invading E. coli were initially able to colonize the biofilms, its abundance subsequently declined. Stagnation was associated with a shift in biofilm taxonomic composition, but there was no apparent effect of flow conditions or the simulated river-pool warming (30 °C) on AMR persistence or invasion success of E. coli. Results however indicated that antibiotic resistance markers in the riverine biofilms decreased under the experimental conditions in the absence of exposure to external inputs of antibiotics and AMR.


Subject(s)
Biofilms , Drug Resistance, Microbial , Escherichia coli , Genes, Bacterial , Anti-Bacterial Agents/pharmacology , Escherichia coli/genetics , Hot Temperature
2.
Nature ; 588(7837): 344-349, 2020 12.
Article in English | MEDLINE | ID: mdl-32814344

ABSTRACT

Leucine-rich repeat kinase 2 (LRRK2) is the most commonly mutated gene in familial Parkinson's disease1 and is also linked to its idiopathic form2. LRRK2 has been proposed to function in membrane trafficking3 and colocalizes with microtubules4. Despite the fundamental importance of LRRK2 for understanding and treating Parkinson's disease, structural information on the enzyme is limited. Here we report the structure of the catalytic half of LRRK2, and an atomic model of microtubule-associated LRRK2 built using a reported cryo-electron tomography in situ structure5. We propose that the conformation of the LRRK2 kinase domain regulates its interactions with microtubules, with a closed conformation favouring oligomerization on microtubules. We show that the catalytic half of LRRK2 is sufficient for filament formation and blocks the motility of the microtubule-based motors kinesin 1 and cytoplasmic dynein 1 in vitro. Kinase inhibitors that stabilize an open conformation relieve this interference and reduce the formation of LRRK2 filaments in cells, whereas inhibitors that stabilize a closed conformation do not. Our findings suggest that LRRK2 can act as a roadblock for microtubule-based motors and have implications for the design of therapeutic LRRK2 kinase inhibitors.


Subject(s)
Cryoelectron Microscopy , Leucine-Rich Repeat Serine-Threonine Protein Kinase-2/chemistry , Leucine-Rich Repeat Serine-Threonine Protein Kinase-2/metabolism , Microtubules/chemistry , Microtubules/metabolism , Parkinson Disease/metabolism , Benzamides/pharmacology , Biocatalysis/drug effects , Dimerization , Dyneins/antagonists & inhibitors , Dyneins/metabolism , Humans , Kinesins/antagonists & inhibitors , Kinesins/metabolism , Leucine-Rich Repeat Serine-Threonine Protein Kinase-2/antagonists & inhibitors , Leucine-Rich Repeat Serine-Threonine Protein Kinase-2/ultrastructure , Microtubules/ultrastructure , Models, Molecular , Movement/drug effects , Protein Binding , Protein Domains/drug effects , Pyrazoles/pharmacology , WD40 Repeats
4.
JAMA Ophthalmol ; 134(7): 827-30, 2016 Jul 01.
Article in English | MEDLINE | ID: mdl-27227434

ABSTRACT

IMPORTANCE: In-the-bag intraocular lens dislocation is an uncommon but serious complication of cataract surgery in patients with previous repair of retinal detachment. The causative mechanism is currently unknown. We report histologic findings from a retrospective case series from 1993 to 2010 and suggest a possible mechanism to explain this association. OBSERVATIONS: Clinical characteristics of 8 patients presenting with in-the-bag intraocular lens dislocation after repair of retinal detachment were evaluated. Explanted capsular bags from 3 of these patients were compared with pathologic changes of crystalline lenses associated with retinal detachment. Histologic examination of the explanted capsular bags revealed a paucicellular membrane that covered the concertina-like folded surface of the lens capsule. The lens capsule was devoid of epithelial cell nuclei and showed excessive thickening with the presence of spindle-shaped cells, such as fibroblasts. Collagen fibers were noted in the extracellular matrix. CONCLUSIONS AND RELEVANCE: Previous studies of crystalline lens pathologic findings associated with retinal detachment have shown changes in the epithelium with migration and subsequent metaplasia of epithelial cells, resulting in excessive thickening of the anterior capsule with a layer of fibrous tissue. In this retrospective series, similar histologic findings were seen, suggesting that zonular dehiscence and lens dislocation may result from progressive capsular contraction secondary to retinal detachment-induced lens epithelial metaplasia.


Subject(s)
Artificial Lens Implant Migration/etiology , Epithelial Cells/pathology , Lens Capsule, Crystalline/pathology , Postoperative Complications , Retinal Detachment/surgery , Aged , Artificial Lens Implant Migration/diagnosis , Humans , Male , Metaplasia/pathology , Middle Aged , Retrospective Studies , Slit Lamp
7.
Mol Biol Rep ; 39(12): 9989-94, 2012 Dec.
Article in English | MEDLINE | ID: mdl-22744429

ABSTRACT

Delayed gastric emptying symptoms are often reported after chemotherapy. This study aims to characterise the effects of chemotherapy on gastric neuro-muscular function. Patients undergoing elective surgery for oesophago-gastric cancer were recruited. Acetylcholinesterase, nNOS, ghrelin receptor and motilin expressions were studied in gastric sections from patients receiving no chemotherapy (n = 3) or oesophageal (n = 2) or gastric (n = 2) chemotherapy. A scoring system quantified staining intensity (0-3; no staining to strong). Stomach sections were separately suspended in tissue baths for electrical field stimulation (EFS) and exposure to erythromycin or carbachol; three patients had no chemotherapy; four completed cisplatin-based chemotherapy within 6 weeks prior to surgery. AChE expression was markedly decreased after chemotherapy (scores 2.3 ± 0.7, 0.5 ± 0.2 and 0 ± 0 in non-chemotherapy, oesophageal- and gastric-chemotherapy groups (p < 0.03 each) respectively. Ghrelin receptor and motilin expression tended to increase (ghrelin: 0.7 ± 0.4 vs 2.0 ± 0.4 and 1.2 ± 0.2 respectively; p = 0.04 and p = 0.2; motilin: 0.7 ± 0.5 vs 2.2 ± 0.5 and 2.0 ± 0.7; p = 0.06 and p = 0.16). Maximal contraction to carbachol was 3.7 ± 0.7 g and 1.9 ± 0.8 g (longitudinal muscle) and 3.4 ± 0.4 g and 1.6 ± 0.6 (circular) in non-chemotherapy and chemotherapy tissues respectively (p < 0.05 each). There were loss of AChE and reduction in contractility to carbachol. The tendency for ghrelin receptors to increase suggests an attempt to upregulate compensating systems. Our study offers a mechanism by which chemotherapy markedly alters neuro-muscular gastric function.


Subject(s)
Adenocarcinoma/physiopathology , Antineoplastic Combined Chemotherapy Protocols/pharmacology , Esophageal Neoplasms/physiopathology , Muscle, Smooth/innervation , Stomach Neoplasms/physiopathology , Stomach/physiopathology , Acetylcholinesterase/metabolism , Adenocarcinoma/drug therapy , Adenocarcinoma/metabolism , Aged , Antineoplastic Combined Chemotherapy Protocols/therapeutic use , Capecitabine , Carbachol/pharmacology , Chemotherapy, Adjuvant , Cholinergic Agonists/pharmacology , Cisplatin/administration & dosage , Deoxycytidine/administration & dosage , Deoxycytidine/analogs & derivatives , Epirubicin/administration & dosage , Esophageal Neoplasms/drug therapy , Esophageal Neoplasms/metabolism , Female , Fluorouracil/administration & dosage , Fluorouracil/analogs & derivatives , Ganglia, Autonomic/pathology , Gastric Emptying/drug effects , Gastric Mucosa/metabolism , Humans , In Vitro Techniques , Male , Middle Aged , Muscle Contraction/drug effects , Muscle, Smooth/drug effects , Muscle, Smooth/pathology , Neoadjuvant Therapy , Stomach/drug effects , Stomach/pathology , Stomach Neoplasms/drug therapy , Stomach Neoplasms/metabolism
11.
Eye (Lond) ; 22(10): 1257-62, 2008 Oct.
Article in English | MEDLINE | ID: mdl-18425061

ABSTRACT

Separation of the vitreous and posterior hyaloid membrane (PHM) or posterior vitreous detachment (PVD) typically occurs between the ages of 45 and 65 years in the general population, but may occur earlier in myopic or otherwise predisposed individuals. Age-related synergetic changes occurring within the cortical and central gel must be distinguished from the PHM, which envelopes it. This study reports on the correlation between 'true' PVD seen clinically by the physician using dynamic examination, high-power slit-lamp biomicroscopy, and oblique illumination with some of its histological, immunohistochemical, and ultrastructural features post-mortem. The presence of the Weiss ring does not necessarily indicate total clean separation of PHM, nor does its absence confirm that the PHM remains attached, since it may be destroyed during the process of separation. Immediately prior to PVD with the vitreous gel attached, the PHM must, by definition, form part of the inner limiting membrane. The detached PHM frequently exhibits basement membrane (BM) and its indigenous laminocytes stain focally for GFAP and type IV collagen. The PHM is distinct from and much thicker than the BM of Müller cells alone and the factors that initiate or limit separation of the PHM require greater study, particularly the role of laminocyte proliferation and migration.


Subject(s)
Vitreous Detachment/pathology , Aged , Humans , Middle Aged , Vitrectomy , Vitreous Detachment/complications
12.
Eye (Lond) ; 22(10): 1310-7, 2008 Oct.
Article in English | MEDLINE | ID: mdl-18344963

ABSTRACT

PURPOSE/BACKGROUND: Epiretinal membrane (ERM) formation is a common change resulting in disturbance of macular vision and predisposing to rhegmatogenous retinal detachment. Current treatment strategies rely chiefly on surgical removal of the membranes from the surface of the retina, allowing the retina to remodel and reattach. Improved knowledge of the pathological process behind the formation of these membranes, particularly knowledge of the cell types involved in their formation, is likely to increase our understanding of the way this group of diseases behave and to improve treatment. METHODS: We reviewed the histological findings of 109 surgically removed specimens and correlated these to age-related changes seen in a 32 cadaver eyes studied after corneal harvesting. The samples were studied using light microscopy and immunocytochemistry. RESULTS: In all cases of idiopathic ERMs, including cellophane maculopathy, macular hole, and vitreomacular traction syndrome, laminocytes were the exclusive cell type present. In cases of macular pucker associated with retinal tears, the membranes contain variable cohesive groups of retinal pigment epithelial (RPE) cells in addition to laminocytes. In cases of proliferative diabetic retinopathy, membranes consist almost entirely of capillaries and hyaline stromal tissue, with or without haemosiderin pigment and RPE cells and in which laminocytes and ILM were not identified. In cadaver eyes PVD was seen in 17/32 (53%) of cases, and the vitreous was attached in 14/32 (43.7%) and in one case no vitreous was present. Isolated laminocytes were present on the retinal surface in 12/18 cases with detached vitreous and in 1/14 cases with attached vitreous. In all cases laminocytes were scanty and confined to the optic nerve head, macular or subjacent macular retina. Immunohistochemistry findings indicate that laminocytes are positive for glial fibrillary acidic protein (GFAP), cytokeratin marker AE1/AE3, type II collagen, and type IV collagen. In some cases novel basement membrane formation was seen. There was a tendency for increased positivity of GFAP and AE1/AE3 with increased cellularity, and where novel basement membrane formation was present. CONCLUSION: Laminocytes are the fundamental cell type in idiopathic ERMs. These cells are frequently found in small and dispersed numbers in eyes containing a PVD. The presence of retinal pigment cells invariable indicates proliferative retinopathy and is only seen in association with a retinal detachment or tear. Diabetic membranes are composed of neovascular stromal tissue, which is most likely to be a response to retinal hypoxia.


Subject(s)
Diabetic Retinopathy/pathology , Epiretinal Membrane/pathology , Retinal Detachment/pathology , Vitreoretinopathy, Proliferative/pathology , Adult , Aged , Aged, 80 and over , Cadaver , Epiretinal Membrane/etiology , Humans , Immunohistochemistry , Middle Aged , Retrospective Studies
14.
Eye (Lond) ; 20(2): 208-14, 2006 Feb.
Article in English | MEDLINE | ID: mdl-15803171

ABSTRACT

AIM: To examine the histological and immunocytochemical characteristics of epiretinal membranes (ERM) associated with stage 4 macular holes (MH) so as to establish a vitreoretinal rationale for surgery in stage 4 MH. METHOD: Consecutive patients with stage 4 MH undergoing vitrectomy and membrane peeling were recruited. Preoperatively, the eyes were examined for ERM formation over the macula and completeness of posterior hyaloid membrane (PHM) separation from the retina. ERM peel specimens obtained during surgery were sent for histological and immunocytochemical studies and were compared with the PHM specimens taken from a previous post-mortem study of eyes with physiological posterior vitreous detachment but without macular holes. RESULT: A total of 13 patients with stage 4 MH fulfilled the inclusion criteria and were recruited. Preoperatively, all eyes had an ERM over the macula and incomplete separation of the PHM seen as a defect in the PHM on specular biomicroscopy. Histologically, the ERM specimens had very similar morphological characteristics to PHM, consisting of an eosinophilic membrane of varying thickness with scattered spindle-shaped cells. The membranes stained positively for type IV collagen while the cells were glial fibrillary acidic protein positive. Postoperatively, successful closure of MH was achieved in all cases. CONCLUSION: Stage 4 MH is characterised by incomplete separation of the PHM from the retina with remnants overlying the macula manifesting as ERM. Removal of the ERM is required during vitrectomy in order to relieve the tangential forces involved in the development of MH.


Subject(s)
Epiretinal Membrane/surgery , Retinal Perforations/surgery , Aged , Aged, 80 and over , Collagen/metabolism , Epiretinal Membrane/metabolism , Epiretinal Membrane/pathology , Female , Follow-Up Studies , Glial Fibrillary Acidic Protein/metabolism , Humans , Immunoenzyme Techniques , Male , Middle Aged , Retinal Perforations/pathology , Retinal Perforations/physiopathology , Specimen Handling , Treatment Outcome , Visual Acuity , Vitrectomy/methods
15.
Eur J Intern Med ; 15(7): 465-466, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15581753

ABSTRACT

Primary synovial sarcoma of the pleura is an uncommon entity in the present medical literature. However, the paucity of documented cases may be due to misdiagnoses as a malignant mesothelioma in the past. Early diagnosis with new molecular techniques may improve the outcome of this tumour, which is believed to have a grave prognosis at present.

16.
Eye (Lond) ; 18(11): 1056-65, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15534590

ABSTRACT

This article discusses two current indications for intraocular surgery for optic nerve conditions. The first topic is macular detachment in association with congenital optic disc pit, and includes a review of the theories of pathogenesis and management options including our own experience of treatment with vitrectomy and gas tamponade. In addition, the histopathological findings of a new case of optic disc pit with serous macular detachment are presented, adding to the rare examples previously reported. The second subject is a radial optic neurotomy, a recently advocated treatment for central retinal vein occlusion, which, despite its controversial nature, is gaining in popularity.


Subject(s)
Optic Nerve Diseases/surgery , Adolescent , Adult , Child , Female , Fluorescein Angiography/methods , Humans , Macula Lutea/surgery , Male , Ophthalmologic Surgical Procedures/methods , Optic Disk/abnormalities , Optic Nerve Diseases/congenital , Retinal Detachment/surgery , Retinal Vein Occlusion/surgery , Vitrectomy/methods
17.
Graefes Arch Clin Exp Ophthalmol ; 242(10): 853-62, 2004 Oct.
Article in English | MEDLINE | ID: mdl-15480733

ABSTRACT

BACKGROUND: This study investigates the similarities and differences between epiretinal membranes in four clinically distinct types of vitreomaculopathy. We propose a hypothesis on the origin of the predominant cell type and its potential role in causing these conditions. METHODS: Epiretinal membranes (ERMs) surgically removed from a prospective, consecutive series of vitrectomies for macular pucker associated with an untreated peripheral horseshoe tear (MP), cellophane maculopathy (CM), stage 4 macular hole (MH) and vitreomacular traction syndrome (VMT) were examined by light microscopy and by immunocytochemistry (ICC) using antibodies marking type IV collagen, type II collagen, glial fibrillary acidic protein (GFAP), and low- and high-molecular-weight cytokeratin (MNF116). These specimens were compared with post-mortem control eyes with and without physiological posterior vitreous detachment (PVD). Light microscopy was carried out on 5-microm-thick sections cut from formalin-fixed, paraffin-embedded tissue blocks. Appropriate autoclave or enzyme pre-digestion steps were deployed to retrieve antigens for ICC. No patient had undergone previous vitreoretinal surgery or peripheral retinopexy. RESULTS: From a series of 38 patients, (13 CM, 8 MP, 16 MH and 1 VMT) a total of 20 specimens contained sufficient tissue for histology and immunocytochemistry. All specimens contained portions of inner limiting membrane (ILM) coated by GFAP-positive cells. Specimens from patients with MP and CM exhibited hyperconvolution of the ILM, which was not found in the specimens from patients with MH or VMT or in the control eyes. Hyperconvolution was associated with increased glial cell density, GFAP staining intensity and duplication of ILM basement membrane. Three cases of ERMs from the MP group contained, in addition, cytokeratin-positive cells. In the control group; post-mortem eyes with PVDs showed patchy staining of the posterior hyaloid membrane for GFAP and type 4 collagen. Post-mortem eyes with attached gel showed weak positivity of the ILM for type 4 collagen, and a monolayer of GFAP-positive cells lined the vitreous aspect of the ILM. CONCLUSIONS: These results indicate that glial cells are fundamentally important in the formation of ERMs found in this group of vitreomaculopathies. The hyperconvolution and duplication of the ILM in CM and MP were striking and distinctive features and suggest a mechanism by which these membranes exert tractional forces on the retina. Post-mortem control eyes contained a similar (but more dispersed) population of GFAP-positive cells in the region of the ILM, suggesting the primary aetiology for CM and MP may originate within the ILM. ERMs from MP cases may, in addition, contain cytokeratin-positive cells, of probable RPE origin.


Subject(s)
Epiretinal Membrane/pathology , Eye Diseases/pathology , Retinal Diseases/pathology , Vitreous Body/pathology , Basement Membrane/metabolism , Basement Membrane/pathology , Basement Membrane/surgery , Biomarkers/metabolism , Collagen Type II/metabolism , Collagen Type IV/metabolism , Epiretinal Membrane/metabolism , Epiretinal Membrane/surgery , Eye Diseases/surgery , Female , Glial Fibrillary Acidic Protein/metabolism , Humans , Immunohistochemistry , Keratins/metabolism , Male , Prospective Studies , Retinal Diseases/surgery , Vitrectomy , Vitreous Body/surgery
20.
Breast ; 13(1): 35-41, 2004 Feb.
Article in English | MEDLINE | ID: mdl-14759714

ABSTRACT

We have undertaken a pilot study to attempt to identify circulating carcinoma cells in a series of patients with advanced breast carcinoma, using reverse transcription-polymerase chain reaction (RT-PCR) to amplify mRNA of epithelial specific antigens. Using this method to amplify mRNA of MUC1 and cytokeratin 7 (CK7) the sensitivity of the technique was demonstrated by means of diluted concentrations of "spiked MCF7" cells in whole blood, showing a detection limit of 1 in 10(6) (CK7) and 1 in 10(5) (MUC1). Positive results were obtained from the peripheral blood of all nine female patients with advanced breast cancer for CK7 and eight of the nine patients for MUC1. CK7 was however detected in five of 11 healthy controls (eight females, three males) and MUC1 in one of the 11 controls. None of the control group were positive for both CK7 and MUC1, in contrast to eight of the nine patients with advanced breast carcinoma who were positive for both markers. The RT-PCR method thus appears sufficiently sensitive to identify circulating tumour cells in peripheral blood samples from patients with advanced breast carcinoma. However a high proportion of false-positive results was seen in the control population. More extensive investigation is required before the technique is likely to be of benefit clinically.


Subject(s)
Breast Neoplasms/pathology , Keratins/biosynthesis , Mucin-1/biosynthesis , Neoplastic Cells, Circulating/metabolism , Adult , Breast Neoplasms/blood , Case-Control Studies , DNA Primers , Female , Humans , Keratin-7 , Keratins/genetics , Male , Middle Aged , Mucin-1/genetics , Neoplasm Metastasis , Pilot Projects , Predictive Value of Tests , RNA, Messenger/blood , RNA, Neoplasm/blood , Reverse Transcriptase Polymerase Chain Reaction , Sensitivity and Specificity
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