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1.
Virology ; 581: 26-33, 2023 04.
Article in English | MEDLINE | ID: mdl-36848734

ABSTRACT

Group H Rotavirus (RVH) is associated with human diarrhea gastroenteritis. The interferon (IFN) response induced by RVH remains unclear. In this study, we first studied the characteristic feature of RVH and found J19 strain of RVH grew less efficiently compared with the G6P1 strain of RVA. Next, we found that infection with the J19 virus resulted in the secretion of IFN-λ1, but not IFN-ß, while both IFN-ß and IFN-λ1 could inhibit J19 replication significantly in Caco-2 cells. NSP1 played an important role in the suppression of type I and type III IFN response, and NSP5 protein significantly inhibited activation of IFN-λ1. J19 NSP1 suppressed the induction of IFN-ß obviously than G6P1 NSP1, while G6P1 NSP1 reduced IFN-λ1 induction to the greatest extent compared with G9P8, Wa, and J19 NSP1s. Our studies reveal the propagation feature of RVH and interferon induction and suppression by group H rotavirus.


Subject(s)
Rotavirus , Humans , Rotavirus/metabolism , Interferon Lambda , Caco-2 Cells , Signal Transduction , Interferons/genetics , Interferons/metabolism
2.
Transbound Emerg Dis ; 63(4): 365-72, 2016 Aug.
Article in English | MEDLINE | ID: mdl-27213718

ABSTRACT

Bat species around the world have recently been recognized as major reservoirs of several zoonotic viruses, such as severe acute respiratory syndrome coronavirus (SARS-CoV), Middle East respiratory syndrome coronavirus (MERS-CoV), Nipah virus and Hendra virus. In this study, consensus primer-based reverse transcriptase polymerase chain reactions (RT-PCRs) and high-throughput sequencing were performed to investigate viruses in bat faecal samples collected at 11 natural bat habitat sites from July to December 2015 in Korea. Diverse coronaviruses were first detected in Korean bat faeces, including alphacoronaviruses, SARS-CoV-like and MERS-CoV-like betacoronaviruses. In addition, we identified a novel bat rotavirus belonging to group H rotavirus which has only been described in human and pigs until now. Therefore, our results suggest the need for continuing surveillance and additional virological studies in domestic bat.


Subject(s)
Chiroptera/virology , Coronavirus/isolation & purification , Feces/virology , Rotavirus/isolation & purification , Severe acute respiratory syndrome-related coronavirus/isolation & purification , Animals , Republic of Korea
3.
Virus Res ; 197: 48-53, 2015 Feb 02.
Article in English | MEDLINE | ID: mdl-25499297

ABSTRACT

Rotaviruses (RV) are a common cause of viral gastroenteritis in humans and animals. Despite the seven groups/species of RV (A-G), recently it was proposed the creation of a new RV group/specie H (RVH) based on VP6 sequence analysis. In this study we determined the VP6, VP7, VP4, and NSP4 nucleotide and deduced amino acid sequences of 6 (BR59-BR64) RVH-positive stool specimens obtained from piglets with diarrhea in Mato Grosso do Sul, Central-West region of Brazil in 2012, using RT-PCR assay. Based on the high sequence identities (>99%) of the VP6, VP4, VP7, and NSP4 genes among 5 of the studied fecal specimens (BR59-BR63), they are considered the same local rotavirus strain denominated RVH/BRA-1. In contrast, once that the fecal sample BR64 showed a relatively high difference (81.6% nt identity and 83.4% aa identity) in the VP7 sequence when compared to the other 5 specimens it was named RVH/BRA-2 strain. Comparative phylogenetic analysis showed that the 6 RVH strains do not cluster together with any available sequences of members of the established RV groups (RVA-RVG), however, seem to be related to RVB and RVG. These results confirm the presence of RVH in Brazil, demonstrate their genetic diversity, and provide new data that will assist in understanding the viral phylogeny and epidemiology, as well as the explanation of patterns of viral evolution and biological properties of RVH.


Subject(s)
Genetic Variation , Rotavirus Infections/veterinary , Rotavirus/classification , Rotavirus/genetics , Swine Diseases/virology , Viral Proteins/genetics , Animals , Brazil , Cluster Analysis , Feces/virology , Phylogeny , Reverse Transcriptase Polymerase Chain Reaction , Rotavirus/isolation & purification , Rotavirus Infections/virology , Sequence Analysis, DNA , Sequence Homology , Swine
4.
Emerg Infect Dis ; 20(6): 1019-22, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24855935

ABSTRACT

We determined nucleotide and deduced amino acid sequences of the rotavirus gene encoding viral protein 6 from 3 fecal samples collected from piglets with diarrhea in Brazil, 2012. The analyses showed that the porcine rotavirus strains in Brazil are closely related to the novel species H rotavirus.


Subject(s)
Antigens, Viral/genetics , Capsid Proteins/genetics , Diarrhea/veterinary , RNA, Viral/genetics , Rotavirus Infections/veterinary , Rotavirus/genetics , Swine Diseases/epidemiology , Animals , Brazil/epidemiology , Diarrhea/epidemiology , Diarrhea/virology , Feces/virology , Phylogeny , Rotavirus/classification , Rotavirus/isolation & purification , Rotavirus Infections/epidemiology , Rotavirus Infections/virology , Swine , Swine Diseases/virology
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