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1.
Heliyon ; 10(15): e35544, 2024 Aug 15.
Article in English | MEDLINE | ID: mdl-39170479

ABSTRACT

This study focuses on the underground shallow gas detection project in the Lingkun Island area of the northern entrance tunnel of the Wenzhou City Light Rail S2 line. Based on geological exploration data of shallow gas, we chose the technique of controlled-release gas with static pressure as the experimental foundation, integrating various technologies such as multi-functional in-situ probing, electrical methods, and seismic waves, comprehensively researching shallow gas detection technology in the Lingkun Island area. We conducted field probing experiments to accurately obtain the physical and mechanical properties of gas-rich soil layers and further studied the possibility of determining gas-rich locations. By applying parallel electrical methods, we can accurately identify and distinguish areas of anomalous resistivity in shallow geological structures. Based on abnormal changes in acoustic impedance in strata, we used seismic wave methods, including seismic CT and seismic wave scattering technology, to accurately reveal the presence and depth of shallow gas, providing reliable basis for accurate determination of shallow gas. Finally, we summarized a comprehensive plan for underground shallow gas detection technology, covering on-site data collection, data processing, and image interpretation of results, which will provide valuable references for future shallow gas exploration in relevant areas.

2.
J Xenobiot ; 14(2): 812-826, 2024 Jun 19.
Article in English | MEDLINE | ID: mdl-38921655

ABSTRACT

Microplastic contamination in agricultural soil is an emerging problem worldwide as it contaminates the food chain. Therefore, this research investigated the distribution of microplastics (MPs) in agricultural soils without mulch at various depths (0-5, 5-10, and 10-15 cm) across different zones: rural, local market, industrial, coastal, and research areas. The detection of MP types and morphology was conducted using FTIR and fluorescence microscopy, respectively. Eight types of MPs were identified, including high-density polyethylene (HDPE), low-density polyethylene (LDPE), polypropylene (PP), polyethylene terephthalate (PET), polyvinyl chloride (PVC), polyvinyl fluoride (PVF), polyvinyl alcohol (PVA), and polytetrafluoroethylene (PTFE), with concentrations ranging from 0.6 ± 0.21 to 3.71 ± 2.36 MPs/g of soil. The study found no significant trends in MP concentration, with ranges of 0-2.1 ± 0.38, 0-2.87 ± 0.55, and 0-2.0 ± 0.34 MPs/g of soil at depths of 0-5 cm, 5-10 cm, and 10-15 cm, respectively. The highest MP quantity was recorded at 8.67 in coastal area, while the lowest was 6.44 in the local market area. Various MP shapes, e.g., fiber, film, pellet, fragment, and irregular, were observed across all layers. PCA suggested irrigation and organic manure as potential sources of MPs. The estimated concentrations of MPs possessed low non-carcinogenic and carcinogenic risks to the farming community of Bangladesh.

3.
Sci Total Environ ; 932: 172829, 2024 Jul 01.
Article in English | MEDLINE | ID: mdl-38692332

ABSTRACT

Permafrost serves as a natural cold reservoir for viral communities. However, little is known about the viromes in deep permafrost soil, as most studies of permafrost were restricted to shallow areas. Here, permafrost soil samples of up to 100 m in depth were collected from two sites in the Tuotuo River permafrost area on the Tibetan Plateau. We investigated the viral composition in these permafrost soil samples and analyzed the relationship of viral composition and diversity along with depths. Our study revealed that greater permafrost thickness corresponds to higher diversity within the viral community. Bacteriophages were found to be the dominant viral communities, with "kill the winner" dynamics observed within the Siphoviridae and Myoviridae. The abundance and diversity of viral communities may follow a potential pattern along soil layers and depths, influenced by pH, trace elements, and permafrost thickness. Notably, strong correlations were discovered between the content of inorganic elements, including B, Mg, Cr, Bi, Ti, Na, Ni, and Cu, and the viral composition. Moreover, we discovered highly conserved sequences of giant viruses at depth of 10, 20, and 50 m in permafrost, which play a crucial role in evolutionary processes. These findings provide valuable insights into the viral community patterns from shallow to 100-m-depth in high-elevation permafrost, offering crucial data support for the formulation of strategies for permafrost thaw caused by climate change and anthropogenic activities.


Subject(s)
Permafrost , Tibet , Soil Microbiology , Virome , Altitude , Environmental Monitoring , Soil/chemistry , Viruses
4.
Sensors (Basel) ; 24(10)2024 May 07.
Article in English | MEDLINE | ID: mdl-38793813

ABSTRACT

The finite element numerical simulation results of deep pit deformation are greatly influenced by soil layer parameters, which are crucial in determining the accuracy of deformation prediction results. This study employs the orthogonal experimental design to determine the combinations of various soil layer parameters in deep pits. Displacement values at specific measurement points were calculated using PLAXIS 3D under these varying parameter combinations to generate training samples. The nonlinear mapping ability of the Back Propagation (BP) neural network and Particle Swarm Optimization (PSO) were used for sample global optimization. Combining these with actual onsite measurements, we inversely calculate soil layer parameter values to update the input parameters for PLAXIS 3D. This allows us to conduct dynamic deformation prediction studies throughout the entire excavation process of deep pits. The results indicate that the use of the PSO-BP neural network for inverting soil layer parameters effectively enhances the convergence speed of the BP neural network model and avoids the issue of easily falling into local optimal solutions. The use of PLAXIS 3D to simulate the excavation process of the pit accurately reflects the dynamic changes in the displacement of the retaining structure, and the numerical simulation results show good agreement with the measured values. By updating the model parameters in real-time and calculating the pile displacement under different working conditions, the absolute errors between the measured and simulated values of pile top vertical displacement and pile body maximum horizontal displacement can be effectively reduced. This suggests that inverting soil layer parameters using measured values from working conditions is a feasible method for dynamically predicting the excavation process of the pit. The research results have some reference value for the selection of soil layer parameters in similar areas.

5.
Environ Toxicol Chem ; 43(6): 1250-1259, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38563658

ABSTRACT

The microplastics (MPs) formed by broken plastic film may migrate in the soil under drip irrigation. To investigate the migration distribution of MPs in desert farmland soil under drip irrigation conditions, our study was conducted on farmland in Xinjiang (China). A MP drip irrigation penetration migration testing device was set up in combination with Xinjiang farmland irrigation methods to conduct a migration simulation experiment. The results showed that the migration amount of MPs in soil was significantly positively correlated with the amount of drip irrigation, and significantly negatively correlated with the soil depth; in addition, the relationship between the migration amount of MPs in different types of soil was: clay < sandy loam < sandy soil. Under drip irrigation conditions, the migration rates of MPs were 30.51%, 19.41%, and 10.29% in sandy soil, sandy loam soil, and clay, respectively. The migration ability of these three particle sizes of polyethylene MPs in soil was ranked as follows: 25 to 147 µm > 0 to 25 µm > 147 to 250 µm. When the drip irrigation volume was 2.6 to 3.2 L, horizontal migration distances of MPs exceeded 5 cm, and vertical migration distances reached more than 30 cm. Our findings provide reference data for the study of soil MP migration. Environ Toxicol Chem 2024;43:1250-1259. © 2024 SETAC.


Subject(s)
Agricultural Irrigation , Desert Climate , Microplastics , Soil Pollutants , Soil , Microplastics/analysis , Soil Pollutants/analysis , Soil/chemistry , China , Environmental Monitoring , Farms
6.
Plants (Basel) ; 13(5)2024 Feb 29.
Article in English | MEDLINE | ID: mdl-38475539

ABSTRACT

The water conservation capacity of the litter and soil layers of forest ecosystems improves the function of forest ecosystems in conserving soil and water. Plantation restoration plays a key role in preventing soil erosion. In order to evaluate the water conservation capacity of plantation restoration in Latosol soil-eroded region, we analyzed the litter thickness and mass, water absorption process, water holding recovery process, and soil water holding capacity of five restoration types (Hevea brasiliensis, Acacia mangium, Eucalyptus robusta, Acacia-Eucalyptus, and Acacia-Hevea) in the Mahuangling Watershed, Hainan province. The results showed that the thickness of the litter ranged from approximately 3.42 ± 0.24 to 4.73 ± 0.81 cm, and the litter mass ranged from 5.04 ± 1.52 t·ha-1 to 13.16 ± 1.76 t·ha-1, with higher litter mass in the SL layer than in the UL layer. The litter mass of A. mangium was higher than that of H. brasiliensis, E. robusta, Acacia-Eucalyptus, and Acacia-Hevea, which was 3.16 ± 1.76 t·ha-1. A. mangium forest was significantly higher than other plantation restoration types in terms of the maximum water retention capacity (Qmax) and the effective water retention capacity (Qeff). The soil bulk weight ranged from approximately 1.52 ± 0.09 to 1.59 ± 0.08 g·cm-3, and porosity ranged from 31.77 ± 4.72 to 35.62 ± 3.02%, both of which increased with the depth of the soil layer. The water holding capacity of 0-60 cm soil varied from approximately 12.94 ± 7.91 to 45.02 ± 31.79 t·ha-1, with A. mangium having the best soil permeability and the strongest soil water holding capacity. The entropy weight method was used to conduct a comprehensive evaluation, and the results showed that the water conservation capacity of the soil layer was 1.26 times higher than that of the litter layer, in which the water conservation capacity of A. mangium was the strongest, with a comprehensive evaluation value of 0.2854, which effectively intercepted rainfall and reduced surface runoff. Hence, we suggest that the planting of A. mangium should be considered in future ecological restoration projects of the erosion area of Mahuangling in order to improve the function of conserving soil and water in a restoration forest ecosystem.

7.
Environ Res ; 252(Pt 1): 118453, 2024 Jul 01.
Article in English | MEDLINE | ID: mdl-38341070

ABSTRACT

Soil contains a substantial amount of organic carbon, and its feedback to global warming has garnered widespread attention due to its potential to modulate atmospheric carbon (C) storage. Temperature sensitivity (Q10) has been widely utilized as a measure of the temperature-induced enhancement in soil organic carbon (SOC) decomposition. It is currently rare to incorporate Q10 of CO2 and CH4 into the study of waterlogged soil profiles and explore the possibility of artificially reducing Q10 in rice fields. To investigate the key drivers of Q10, we collected 0-1 m paddy soil profiles, and stratified the soil for submerged anaerobic incubation. The relationship between SOC availability, microbial activity, and the Q10 of CO2 and CH4 emissions was examined. Our findings indicate that as the soil layer deepens, soil C availability and microbial activity declined, and the Q10 of anaerobic degradation increased. Warming increased C availability and microbial activity, accompanied by weakened temperature sensitivity. The Q10 of CO2 correlated strongly with soil resistant C components, while the Q10 of CH4 was significantly influenced by labile substrates. The temperature sensitivity of CH4 (Q10 = 3.99) was higher than CO2 emissions (Q10 = 1.78), indicating the need for greater attention of CH4 in predicting warming's impact on anaerobic degradation in rice fields. Comprehensively assessing CO2 and CH4 emissions, the 20-40 cm subsurface soil is the most temperature-sensitive. Despite being a high-risk area for C loss and CH4 emissions, management of this soil layer in agriculture has the potential to reduce the threat of global warming. This study underscores the importance of subsurface soil in paddy fields, advocating greater attention in scientific simulations and predictions of climate change.


Subject(s)
Carbon , Methane , Oryza , Soil Microbiology , Soil , Temperature , Soil/chemistry , Carbon/analysis , Carbon/metabolism , Oryza/growth & development , Methane/analysis , Methane/metabolism , Anaerobiosis , Carbon Dioxide/analysis , Carbon Dioxide/metabolism , Global Warming
8.
Sci Total Environ ; 916: 170017, 2024 Mar 15.
Article in English | MEDLINE | ID: mdl-38219995

ABSTRACT

Anthropogenic nitrogen (N) deposition and increased precipitation are known to alter soil microbial communities. However, the combined effects of elevated N deposition and increased precipitation on soil microbial community dynamics and co-occurrence networks in temperate forests remain elusive. In this study, we conducted a field manipulation experiment by applying N solution and water to the forest canopy to simulate natural N deposition and increased precipitation in a temperate forest. We collected samples in the litter layer, organic soil layer, and mineral soil layer in 2018-2019 after 6-7 years of N and water treatments, and explored how elevated N deposition and increased precipitation regulate soil microbial diversity, community composition, and co-occurrence networks in different soil layers and at different sampling times. We found that the effects of N deposition and increased precipitation on soil microbial communities varied with soil layers and sampling times. Compared to the ambient environment, single canopy N addition (CN) or single canopy water addition (CW) did not affect bacterial Shannon diversity in the mineral soil layer in 2018, but the combined canopy N and water additions (CNW) decreased it in this layer at this time. CN increased fungal OTU richness in the organic and mineral soil layers in 2018; however, CW and CNW did not have an effect on it in the same layer at the same time. CW and CNW, but not CN, significantly affected bacterial and fungal community compositions in the litter layer in 2018 and in the organic soil layer in 2019. In contrast, CN, but not CW or CNW, significantly affected fungal community composition in the litter layer in 2019. CNW exhibited higher complexities of bacterial and fungal co-occurrence networks than CN and the ambient environment, indicating increased precipitation can strengthen the effect of N deposition on the complexity of bacterial and fungal co-occurrence networks. Our findings suggest that increased precipitation alters the effects of atmospheric N deposition on soil bacterial and fungal communities in this temperate forest, depending on soil layer and sampling time. Moreover, both bacterial and fungal community compositions are sensitive to increased precipitation, but the bacterial community composition is more sensitive to N deposition than the fungal community composition in the organic and mineral soil layers in this forest.


Subject(s)
Mycobiome , Nitrogen , Nitrogen/analysis , Soil , Soil Microbiology , Forests , Bacteria , Minerals
9.
Sci Total Environ ; 912: 168858, 2024 Feb 20.
Article in English | MEDLINE | ID: mdl-38030001

ABSTRACT

Perennially frozen soil, also known as permafrost, is important for the functioning and productivity of most of the boreal forest, the world's largest terrestrial biome. A better understanding of complex vegetation-permafrost interrelationships is needed to predict changes in local- to large-scale carbon, nutrient, and water cycle dynamics under future global warming. Here, we analyze tree-ring width and tree-ring stable isotope (C and O) measurements of Gmelin larch (Larix gmelinii (Rupr.) Rupr.) from six permafrost sites in the northern taiga of central Siberia. Our multi-parameter approach shows that changes in tree growth were predominantly controlled by the air and topsoil temperature and moisture content of the active soil and upper permafrost layers. The observed patterns range from strong growth limitations by early summer temperatures at higher elevations to significant growth controls by precipitation at warmer and well-drained lower-elevation sites. Enhanced radial tree growth is mainly found at sites with fast thawing upper mineral soil layers, and the comparison of tree-ring isotopes over five-year periods with different amounts of summer precipitation indicates that trees can prevent drought stress by accessing water from melted snow and seasonally frozen soil. Identifying the active soil and upper permafrost layers as central water resources for boreal tree growth during dry summers demonstrates the complexity of ecosystem responses to climatic changes.


Subject(s)
Permafrost , Taiga , Ecosystem , Droughts , Soil , Forests
10.
Environ Technol ; : 1-12, 2023 Nov 16.
Article in English | MEDLINE | ID: mdl-37970865

ABSTRACT

Nitrate leaching from farmland pollutes the surrounding environment, such as groundwater, causing health hazards to inhabitants. To mitigate the leaching, biochar can be applied. The effect of biochar application differs depending on the application depth; however, the effect of the application depth remains unclear. To evaluate the effect, we conducted a pipe experiment with no plant using bagasse biochar with four treatments: no biochar application, surface application (0-5 cm), plow layer application (0-30 cm), and subsurface application (25-30 cm). The results showed that surface and plow layer applications reduced nitrate leaching, whereas subsurface application did not affect leaching. This difference was due to changes in the soil water movement and water budget. Surface application reduced evaporation, inducing increases in both drainage and the amount of water in the pipe. The increased amount of water might contribute to an increase in the amount of nitrogen in the pipe, reducing the leaching. Plow layer application increased evaporation, leading to decreased drainage and nitrate leaching. Subsurface application did not affect drainage and nitrate leaching; however, the change in the volumetric water content at a depth of 10 cm was the most significant among the treatments. Our study indicated that, although the same amount of biochar was applied, the effect of biochar application differs depending on the application depth.

11.
Ecotoxicol Environ Saf ; 266: 115595, 2023 Nov 01.
Article in English | MEDLINE | ID: mdl-37839185

ABSTRACT

Land use and cover change are major factors driving global change and greatly impact terrestrial organisms, especially soil microbial diversity. Little is known, however, about bacterial diversity, distribution patterns and assembly processes across different land use types. In this study, therefore, we conducted a large-scale field survey of 48 sampling sites, encompassing different land use types in Xuancheng city, China, with different degrees of soil disturbance and different soil horizons. The distance-decay relationships (DDRs), assembly processes and the spatial patterns of soil bacterial communities were investigated based on high-throughput sequencing data. We found that the DDRs might be weakened by anthropogenic disturbances, which were not observed in tilled soils, while a decreasing trend was observed along the soil horizon in untilled soils. The relative importance of environmental factors and geographic distance varied with soil tillage. Specifically, bacterial communities in tilled soils were driven by non-spatially autocorrelated environmental factors, while untilled soils were more susceptible to geographic distance. In addition, the heterogeneity of soil properties, as well as the differences in soil bacterial niche width and niche overlap, determined the assembly processes of the bacterial community, resulting in opposite trends along the soil layers in tilled and untilled soils. These findings expand the current understanding of the biogeography of soil bacterial communities across different land use types.


Subject(s)
Soil Microbiology , Soil , Bacteria/genetics , China , High-Throughput Nucleotide Sequencing
12.
Ying Yong Sheng Tai Xue Bao ; 34(7): 1845-1852, 2023 Jul.
Article in English | MEDLINE | ID: mdl-37694468

ABSTRACT

We conducted a 512-day incubation experiment to study the dynamics of microbial necromass and soil carbon fraction in the 'litter-soil' transformation interface soil layer (TIS) during litter decomposition, using a perennial C3 herb, Stipa bungeana, in the loess hills. The results showed that soil microbial necromass was dominated by fungi in the early and middle stages, and by bacteria in the late stage. The contribution of fungal necromass C to mineral-associated organic C (MAOC) was significantly higher (38.7%-75.8%) than that of bacteria (9.2%-22.5%) and 2-3 times more than the contribution rate of bacterial necromass. Soil organic C (SOC) content was decreasing during litter decomposition. The input of plant C resources stimulated microbial utilization of soil C fractions. The continuous decrease in particulate organic C during the early and late stages of decomposition was directly responsible for the decrease in SOC content. In contrast, the fluctuating changes in microbial necromass C and MAOC played an indirect role in the reduction of SOC. The increase in soil microbial necromass C caused by a single exogenous addition of litter did not directly contribute to SOC accumulation.


Subject(s)
Carbon , Soil , Dust , Poaceae
13.
Sci Total Environ ; 894: 164974, 2023 Oct 10.
Article in English | MEDLINE | ID: mdl-37336406

ABSTRACT

The establishment of forest plantations is an excellent silvicultural alternative to improve atmospheric carbon (C) sequestration for climate change mitigation. In recent years, the importance of forest growth and C dynamics at different stand ages have drawn huge attention for investigation. To evaluate the impacts of different stand ages on the C storage capacity of Castanopsis hystrix plantations ecosystems, we measured biomass and C content in trees, understory, litter, and soil components from field measurements at different stand ages, i.e., 6-, 10-, 15-, 25-, and 34-year-old stands. Results showed that the C stocks in trees, understory vegetation, litter, soil and the whole ecosystem increased steadily with stand age. C. hystrix C storage capacity in the 6-, 10-, 15-, 25-, and 34-year-old stands were 29.17, 56.18, 85.60, 132.19 and 157.79 Mg ha-1, respectively, while the total ecosystem C storage capacity was 68.11, 106.11, 136.13, 187.34 and 226.14 Mg ha-1, respectively. Meanwhile, the C sequestration rate in the 6-10, 10-15, 15-25 and 25-35-year-old stands were 675.28, 588.35, 465.97 and 284.39 g m2 year-1, respectively. Similarly, total biomass of trees, understory, and litter increased with stand age. Our study indicated that C. hystrix plantations are still developing in the area, since live biomass and soil C continue to accumulate despite reduced C sequestration rates. The information provided here highlight the C stock and C sequestration rates of C. hystrix at different stand ages, providing baseline information on the C dynamics of young and older stand of C. hystrix in this region; Hence, such knowledge could be useful for designing more realistic policies to mitigate climate change, such as programs to maintain continuous forest growth.


Subject(s)
Carbon , Ecosystem , Carbon/analysis , Forests , Biomass , Trees , Soil , Carbon Sequestration , China
14.
Ying Yong Sheng Tai Xue Bao ; 34(3): 614-622, 2023 Mar.
Article in English | MEDLINE | ID: mdl-37087643

ABSTRACT

Microbial biomass and community structure play a significant role in soil carbon cycling. There is a large amount of organic carbon in the subsoil, but most studies on soil microbial community have focused on the surface soil. The changes and influencing mechanisms of microbial community in subsoil are unclear. We analyzed soil microbial biomass and community structure at different soil depths (0-20, 20-40, 40-60, 60-80, and 80-100 cm) in three typical forests in southwest China, Xishuangbanna tropical rain forest, Ailao Mountain subtropical broad-leaved forest, and Lijiang temperate coniferous forest, by using phospholipid fatty acid technology, to explore their variation characteristics and influencing factors in different forests and soil depths. The results showed that contents of soil organic carbon and total nitrogen decreased gradually, microbial biomass declined significantly. The ratio of Gram-positive bacteria to Gram-negative bacteria (G+:G-) reduced gradually, while the ratio of fungi to bacteria (F:B) increased with the increasing soil depth. Microbial community turned from G--dominated which adapted to eutrophic environment into G+-dominated which adapted to oligotrophic environment. The three forest types differed little in soil microbial biomass, but different significantly in microbial community structure. Ailao Mountain subtropical broad-leaved forest and Lijiang temperate coniferous forest had much higher F:B at 0-20 cm than Xishuangbanna tropical rain forest, while significantly higher G+:G- at 0-100 cm in Xishuangbanna tropical rain forest was observed. Results of the redundancy analysis showed that the contents of soil organic carbon and total nitrogen were the main factors determining microbial biomass, with combined explanation of 78.3%. Results of the stepwise regression analysis showed that C:N was the most important driving factor on F:B and G+:G-. The change in microbial community structure and the decrease in biomass along soil profile might strongly affect the dynamics of soil organic carbon in southwest China forests.


Subject(s)
Carbon , Soil , Soil/chemistry , Carbon/analysis , Soil Microbiology , Forests , China , Biomass , Nitrogen/analysis
15.
J Hazard Mater ; 448: 130934, 2023 Apr 15.
Article in English | MEDLINE | ID: mdl-36860071

ABSTRACT

Soil pollution at steelworks mega-sites has become a severe environmental issue worldwide. However, due to the complex production processes and hydrogeology, the soil pollution distribution at steelworks is still unclear. This study scientifically cognized the distribution characteristics of polycyclic aromatic hydrocarbons (PAHs), volatile organic compounds (VOCs), and heavy metals (HMs) at a steelworks mega-site based on multi-source information. Specifically, firstly, 3D distribution and spatial autocorrelation of pollutants were obtained by interpolation model and local indicators of spatial associations (LISA), respectively. Secondly, the characteristics of horizontal distribution, vertical distribution, and spatial autocorrelations of pollutants were identified by combining multi-source information such as production processes, soil layers, and properties of pollutants. Horizontal distribution showed that soil pollution in steelworks mainly occurred in the front end of the steel process chain. Over 47% of PAHs and VOCs pollution area were distributed in coking plants and over 69% of HMs in stockyards. Vertical distribution indicated that HMs, PAHs, and VOCs were enriched in the fill, silt, and clay layers, respectively. Spatial autocorrelation of pollutants was positively correlated with their mobility. This study clarified the soil pollution characteristics at steelworks mega-sites, which can support the investigation and remediation of steelworks mega-sites.

16.
Front Microbiol ; 14: 1095937, 2023.
Article in English | MEDLINE | ID: mdl-36819044

ABSTRACT

The newly identified complete ammonia oxidizer (comammox) that converts ammonia directly into nitrate has redefined the long-held paradigm of two-step nitrification mediated by two distinct groups of nitrifiers. However, exploration of the niche differentiation of canonical nitrifiers and comammox Nitrospira and their ecological importance in agroecosystems is still limited. Here, we adopted quantitative PCR (qPCR) and Illumina MiSeq sequencing to investigate the effects of five long-term fertilization regimes in the variations of ammonia-oxidizing bacteria (AOB), ammonia-oxidizing archaea (AOA), nitrite-oxidizing bacteria (NOB), and comammox Nitrospira abundances and comammox community composition in two soil layers (0-20 cm, topsoil; 20-40 cm, subsoil) in an Alfisol in Northeast China. The fertilization treatments included no fertilizer (CK); chemical nitrogen (N) fertilizer; chemical N; phosphorus (P) and potassium (K) fertilizers (NPK); recycled organic manure (M) and chemical N, P, K plus recycled manure (MNPK). Compared with CK, manure and/or chemical fertilizer significantly increased the AOB amoA gene abundance. Long-term recycled manure increased soil organic matter (SOM) contents and maintained the soil pH, but decreased the NH4 +-N concentrations, which markedly promoted the nxrA and nxrB gene abundances of NOB and the amoA gene abundances of comammox Nitrospira clade A and AOA. Although the comammox Nitrospira clade B abundance tended to decrease after fertilization, the structural equation modeling analysis showed that comammox clade B had direct positive impacts on soil potential ammonia oxidation (PAO; λ = 0.59, p < 0.001). The long-term fertilization regime altered the community composition of comammox Nitrospira. Additionally, comammox Nitrospira clades A and B had individual response patterns to the soil layer. The relative abundance of clade A was predominant in the topsoil in the N (86.5%) and MNPK (76.4%) treatments, while clade B appeared to be dominant in the subsoil (from 78.7 to 88.1%) with lower ammonium contents, implying niche separation between these clades. Soil pH, NH4 +-N and SOM content were crucial factors shaping the soil nitrifying microbial abundances and the comammox Nitrospira community. Together, these findings expand the current understanding of the niche specialization and the important role of comammox Nitrospira in terrestrial ecosystems.

17.
Microb Ecol ; 85(2): 628-641, 2023 Feb.
Article in English | MEDLINE | ID: mdl-35083529

ABSTRACT

Microorganisms inhabit the entire soil profile and play important roles in nutrient cycling and soil formation. Recent studies have found that soil bacterial diversity and composition differ significantly among soil layers. However, little is known about the vertical variation in soil bacterial communities and how it may change along an elevation gradient. In this study, we collected soil samples from 5 forest types along an elevation gradient in Taibai Mountain to characterize the bacterial communities and their vertical patterns and variations across soil profiles. The richness and Shannon index of soil bacterial communities decreased from surface soils to deep soils in three forest types, and were comparable among soil layers in the other two forests at the medium elevation. The composition of soil bacterial communities differed significantly between soil layers in all forest types, and was primarily affected by soil C availability. Oligotrophic members of the bacterial taxa, such as Chloroflexi, Gemmatimonadetes, Nitrospirae, and AD3, were more abundant in the deep layers. The assembly of soil bacterial communities within each soil profile was mainly governed by deterministic processes based on environmental heterogeneity. The vertical variations in soil bacterial communities differed among forest types, and the soil bacterial communities in the Betula albo-sinensis forest at the medium elevation had the lowest vertical variation. The vertical variation was negatively correlated with mean annual precipitation (MAP), weighted rock content, and weighted sand particle content in soils, among which MAP had the highest explanatory power. These results indicated that the vertical mobilization of microbes with preferential and matrix flows likely enhanced bacterial homogeneity. Overall, our results suggest that the vertical variations in soil bacterial communities differ along the elevation gradient and potentially affect soil biological processes across soil profiles.


Subject(s)
Chloroflexi , Soil , Soil Microbiology , Forests , Bacteria
18.
J Hazard Mater ; 445: 130518, 2023 03 05.
Article in English | MEDLINE | ID: mdl-36493652

ABSTRACT

In this study, the zero valent iron-biochar composite (ZVI-BC) was applied to construct an active surface soil layer for the simultaneous remediation of As-Zn contaminated soil and groundwater, focusing on the influence of the infiltration mode of pumped-up groundwater into soil. The active surface soil treated more contaminated groundwater for As (4.45-5.46 L kg-1 soil) than that for Zn (2.52-3.13 L kg-1 soil) under both continuous and intermittent infiltration modes, with about 98% As and 95% Zn removed from groundwater and retained in the soil. As(V) precipitated with Fe(III) due to ZVI oxidation, which was responsible for the As immobilization. The soil under the intermittent infiltration mode was enriched by the Sphingomonas with arsenate reductase gene, which promoted more reduction of As(V) into As(III) and facilitated coprecipitation of As(III) with Fe(III). The Mn oxide determined the sorption of Zn in the active soil layer, where the Hyphomicrobium, one type of manganese oxidizing bacteria, was much higher under the continuous infiltration mode, which accounted for the more Zn immobilization. After the remediation, both As and Zn immobilized in the active surface soil showed high stability, with the average downward migration rate of only 0.207-0.368 cm year-1 within 20-year rainfall exposure. Our findings indicate that this active surface soil layer is applicable for simultaneous immobilization of As and Zn in both contaminated soil and groundwater, and the groundwater intermittent infiltration could be a better option considering the remediation effectiveness, the immobilization mechanism, the long-term stability, and the energetic efficiency.


Subject(s)
Groundwater , Soil Pollutants , Soil , Ferric Compounds , Charcoal , Zinc , Soil Pollutants/analysis
19.
Front Plant Sci ; 13: 1053009, 2022.
Article in English | MEDLINE | ID: mdl-36570917

ABSTRACT

Living grass mulching (LGM) is an important orchard floor management that has been applied worldwide. Although LGM can effectively enhance soil nutrient availability and fertility, its effects on microbial-mediated soil nutrient cycling and main drivers are unclear. Meanwhile, the variation of enzyme activities and soil nutrient availability with LGM duration have been rarely studied. This study aims to explore the effects of mulching age and soil layer on enzyme activities and soil nutrients in citrus orchards. In this study, three LGM (Vicia villosa) treatments were applied, i.e., mulching for eight years, mulching for four years, and no mulching (clean tillage). Their effects on the enzyme activities and soil nutrients were analyzed in different soil layers of citrus orchards in subtropical China, i.e., 0-10, 10-20, and 20-40 cm. Compared to clean tillage, mulching for four years had fewer effects on enzyme activities and soil nutrients. In contrast, mulching for eight years significantly increased available nitrogen (N), phosphorus (P) nutrients, ß-glucosidase, and cellobiohydrolase activities in the soil layer of 0-20 cm. In the soil layer of 0-40 cm, microbial biomass carbon (C), N, P, N-acetylglucosaminidase, leucine aminopeptidase, and acid phosphatase activities also increased (P < 0.05). Mulching for eight years significantly promoted C, N, and P-cycling enzyme activities and total enzyme activities by 2.45-6.07, 9.29-54.42, 4.42-7.11, and 5.32-14.91 times, respectively. Redundancy analysis shows that mulching treatments for eight and four years had soil layer-dependent positive effects on soil enzyme activities. Microbial C and P showed the most significant positive correlation with enzyme activities, followed by moisture content, organic C, and available N (P < 0.05). Available nutrients contributed almost 70% to affect enzyme activities significantly and were the main drivers of the enzyme activity variation. In summary, LGM could improve soil enzyme activities by increasing available nutrients. The promotion effect was more significant under mulching for eight years. Therefore, extending mulching age and improving nutrient availability are effective development strategies for sustainable soil management in orchard systems. Our study can provide valuable guidelines for the design and implementation of more sustainable management practices in citrus orchards.

20.
J Fungi (Basel) ; 8(9)2022 Sep 09.
Article in English | MEDLINE | ID: mdl-36135673

ABSTRACT

Plant litter decomposition is a complex, long-term process. The decomposition of litterfall is a major process influencing nutrient balance in forest soil. The soil microbiome is exceptionally diverse and is an essential regulator of litter decomposition. However, the microbiome composition and the interaction with litterfall and soil remain poorly understood. In this study, we examined the bacterial and fungal community composition of Lithocarpus across soil samples from different sampling seasons. Our results displayed that the microbiome assembly along the soil layer is influenced predominantly by the soil layer rather than by the sampling season. We identified that the soil layer strongly affected network complexity and that bacterial and fungal microbiomes displayed different patterns in different soil layers. Furthermore, source tracking and community composition analysis indicated that there are significantly different between soil and litter. Moreover, our results demonstrate that few dominant taxa (2% and 4% of bacterial and fungal phylotypes) dominated in the different soil layers. Hydnodontaceae was identified as the most important biomarker taxa for humic fragmented litter fungal microbiome and Nigrospora and Archaeorhizomycetaceae for organic soil and the organic mineral soil layer, and the phylum of Acidobacteria for the bacteria microbiome. Our work provides comprehensive evidence of significant microbiome differences between soil layers and has important implications for further studying soil microbiome ecosystem functions.

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