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1.
Sensors (Basel) ; 21(12)2021 Jun 15.
Article in English | MEDLINE | ID: mdl-34203863

ABSTRACT

Remote Sensing, as a driver for water management decisions, needs further integration with monitoring water quality programs, especially in developing countries. Moreover, usage of remote sensing approaches has not been broadly applied in monitoring routines. Therefore, it is necessary to assess the efficacy of available sensors to complement the often limited field measurements from such programs and build models that support monitoring tasks. Here, we integrate field measurements (2013-2019) from the Mexican national water quality monitoring system (RNMCA) with data from Landsat-8 OLI, Sentinel-3 OLCI, and Sentinel-2 MSI to train an extreme learning machine (ELM), a support vector regression (SVR) and a linear regression (LR) for estimating Chlorophyll-a (Chl-a), Turbidity, Total Suspended Matter (TSM) and Secchi Disk Depth (SDD). Additionally, OLCI Level-2 Products for Chl-a and TSM are compared against the RNMCA data. We observed that OLCI Level-2 Products are poorly correlated with the RNMCA data and it is not feasible to rely only on them to support monitoring operations. However, OLCI atmospherically corrected data is useful to develop accurate models using an ELM, particularly for Turbidity (R2 = 0.7). We conclude that remote sensing is useful to support monitoring systems tasks, and its progressive integration will improve the quality of water quality monitoring programs.


Subject(s)
Remote Sensing Technology , Water Quality , Chlorophyll A , Environmental Monitoring , Water
2.
Front Hum Neurosci ; 15: 622146, 2021.
Article in English | MEDLINE | ID: mdl-34025373

ABSTRACT

Hyperscanning studies using functional Near-Infrared Spectroscopy (fNIRS) have been performed to understand the neural mechanisms underlying human-human interactions. In this study, we propose a novel methodological approach that is developed for fNIRS multi-brain analysis. Our method uses support vector regression (SVR) to predict one brain activity time series using another as the predictor. We applied the proposed methodology to explore the teacher-student interaction, which plays a critical role in the formal learning process. In an illustrative application, we collected fNIRS data of the teacher and preschoolers' dyads performing an interaction task. The teacher explained to the child how to add two numbers in the context of a game. The Prefrontal cortex and temporal-parietal junction of both teacher and student were recorded. A multivariate regression model was built for each channel in each dyad, with the student's signal as the response variable and the teacher's ones as the predictors. We compared the predictions of SVR with the conventional ordinary least square (OLS) predictor. The results predicted by the SVR model were statistically significantly correlated with the actual test data at least one channel-pair for all dyads. Overall, 29/90 channel-pairs across the five dyads (18 channels 5 dyads = 90 channel-pairs) presented significant signal predictions withthe SVR approach. The conventional OLS resulted in only 4 out of 90 valid predictions. These results demonstrated that the SVR could be used to perform channel-wise predictions across individuals, and the teachers' cortical activity can be used to predict the student brain hemodynamic response.

3.
Sensors (Basel) ; 21(9)2021 Apr 23.
Article in English | MEDLINE | ID: mdl-33922627

ABSTRACT

Smart cities are characterized by the use of massive information and digital communication technologies as well as sensor networks where the Internet and smart data are the core. This paper proposes a methodology to geocode traffic-related events that are collected from Twitter and how to use geocoded information to gather a training dataset, apply a Support Vector Machine method, and build a prediction model. This model produces spatiotemporal information regarding traffic congestions with a spatiotemporal analysis. Furthermore, a spatial distribution represented by heat maps is proposed to describe the traffic behavior of specific and sensed areas of Mexico City in a Web-GIS application. This work demonstrates that social media are a good alternative that can be leveraged to gather collaboratively Volunteered Geographic Information for sensing the dynamic of a city in which citizens act as sensors.

4.
Anim Genet ; 52(1): 32-46, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33191532

ABSTRACT

This study aimed to assess the predictive ability of different machine learning (ML) methods for genomic prediction of reproductive traits in Nellore cattle. The studied traits were age at first calving (AFC), scrotal circumference (SC), early pregnancy (EP) and stayability (STAY). The numbers of genotyped animals and SNP markers available were 2342 and 321 419 (AFC), 4671 and 309 486 (SC), 2681 and 319 619 (STAY) and 3356 and 319 108 (EP). Predictive ability of support vector regression (SVR), Bayesian regularized artificial neural network (BRANN) and random forest (RF) were compared with results obtained using parametric models (genomic best linear unbiased predictor, GBLUP, and Bayesian least absolute shrinkage and selection operator, BLASSO). A 5-fold cross-validation strategy was performed and the average prediction accuracy (ACC) and mean squared errors (MSE) were computed. The ACC was defined as the linear correlation between predicted and observed breeding values for categorical traits (EP and STAY) and as the correlation between predicted and observed adjusted phenotypes divided by the square root of the estimated heritability for continuous traits (AFC and SC). The average ACC varied from low to moderate depending on the trait and model under consideration, ranging between 0.56 and 0.63 (AFC), 0.27 and 0.36 (SC), 0.57 and 0.67 (EP), and 0.52 and 0.62 (STAY). SVR provided slightly better accuracies than the parametric models for all traits, increasing the prediction accuracy for AFC to around 6.3 and 4.8% compared with GBLUP and BLASSO respectively. Likewise, there was an increase of 8.3% for SC, 4.5% for EP and 4.8% for STAY, comparing SVR with both GBLUP and BLASSO. In contrast, the RF and BRANN did not present competitive predictive ability compared with the parametric models. The results indicate that SVR is a suitable method for genome-enabled prediction of reproductive traits in Nellore cattle. Further, the optimal kernel bandwidth parameter in the SVR model was trait-dependent, thus, a fine-tuning for this hyper-parameter in the training phase is crucial.


Subject(s)
Cattle/genetics , Machine Learning , Models, Genetic , Reproduction/genetics , Animals , Brazil , Female , Genomics , Phenotype , Polymorphism, Single Nucleotide , Pregnancy
5.
Acta Neurochir Suppl ; 126: 159-162, 2018.
Article in English | MEDLINE | ID: mdl-29492553

ABSTRACT

OBJECTIVE: We analyzed the performance of linear and nonlinear models to assess dynamic cerebral autoregulation (dCA) from spontaneous variations in healthy subjects and compared it with the use of two known maneuvers to abruptly change arterial blood pressure (BP): thigh cuffs and sit-to-stand. MATERIALS AND METHODS: Cerebral blood flow velocity and BP were measured simultaneously at rest and while the maneuvers were performed in 20 healthy subjects. To analyze the spontaneous variations, we implemented two types of models using support vector machine (SVM): linear and nonlinear finite impulse response models. The classic autoregulation index (ARI) and the more recently proposed model-free ARI (mfARI) were used as measures of dCA. An ANOVA analysis was applied to compare the different methods and the coefficient of variation was calculated to evaluate their variability. RESULTS: There are differences between indexes, but not between models and maneuvers. The mfARI index with the sit-to-stand maneuver shows the least variability. CONCLUSIONS: Support vector machine modeling of spontaneous variation with the mfARI index could be used for the assessment of dCA as an alternative to maneuvers to introduce large BP fluctuations.


Subject(s)
Arterial Pressure/physiology , Blood Flow Velocity/physiology , Cerebrovascular Circulation/physiology , Homeostasis/physiology , Posture/physiology , Adult , Female , Healthy Volunteers , Humans , Linear Models , Male , Middle Cerebral Artery/diagnostic imaging , Nonlinear Dynamics , Support Vector Machine , Ultrasonography, Doppler, Transcranial , Young Adult
6.
Sensors (Basel) ; 17(10)2017 Oct 16.
Article in English | MEDLINE | ID: mdl-29035333

ABSTRACT

Pollution on water resources is usually analyzed with monitoring campaigns, which consist of programmed sampling, measurement, and recording of the most representative water quality parameters. These campaign measurements yields a non-uniform spatio-temporal sampled data structure to characterize complex dynamics phenomena. In this work, we propose an enhanced statistical interpolation method to provide water quality managers with statistically interpolated representations of spatial-temporal dynamics. Specifically, our proposal makes efficient use of the a priori available information of the quality parameter measurements through Support Vector Regression (SVR) based on Mercer's kernels. The methods are benchmarked against previously proposed methods in three segments of the Machángara River and one segment of the San Pedro River in Ecuador, and their different dynamics are shown by statistically interpolated spatial-temporal maps. The best interpolation performance in terms of mean absolute error was the SVR with Mercer's kernel given by either the Mahalanobis spatial-temporal covariance matrix or by the bivariate estimated autocorrelation function. In particular, the autocorrelation kernel provides with significant improvement of the estimation quality, consistently for all the six water quality variables, which points out the relevance of including a priori knowledge of the problem.

7.
Talanta ; 142: 197-205, 2015 Sep 01.
Article in English | MEDLINE | ID: mdl-26003712

ABSTRACT

This paper aims to estimate the temperature equivalent to 10% (T10%), 50% (T50%) and 90% (T90%) of distilled volume in crude oils using (1)H NMR and support vector regression (SVR). Confidence intervals for the predicted values were calculated using a boosting-type ensemble method in a procedure called ensemble support vector regression (eSVR). The estimated confidence intervals obtained by eSVR were compared with previously accepted calculations from partial least squares (PLS) models and a boosting-type ensemble applied in the PLS method (ePLS). By using the proposed boosting strategy, it was possible to identify outliers in the T10% property dataset. The eSVR procedure improved the accuracy of the distillation temperature predictions in relation to standard PLS, ePLS and SVR. For T10%, a root mean square error of prediction (RMSEP) of 11.6°C was obtained in comparison with 15.6°C for PLS, 15.1°C for ePLS and 28.4°C for SVR. The RMSEPs for T50% were 24.2°C, 23.4°C, 22.8°C and 14.4°C for PLS, ePLS, SVR and eSVR, respectively. For T90%, the values of RMSEP were 39.0°C, 39.9°C and 39.9°C for PLS, ePLS, SVR and eSVR, respectively. The confidence intervals calculated by the proposed boosting methodology presented acceptable values for the three properties analyzed; however, they were lower than those calculated by the standard methodology for PLS.

8.
Talanta ; 119: 582-9, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24401458

ABSTRACT

In this work, multivariate calibration based on partial least squares (PLS) and support vector regression (SVR) using the whole spectrum and variable selection by synergy interval (siPLS and siSVR) were applied to NIR spectra for the determination of animal fat biodiesel content in soybean biodiesel and B20 diesel blends. For all models, prediction errors, bias test for systematic errors and permutation test for trends in the residuals were calculated. The siSVR produced significantly lower prediction errors compared to the full spectrum methods and siPLS, with a root mean squares error (RMSEP) of 0.18%(w/w) (concentration range: 0.00%-69.00%(w/w)) in the soybean biodiesel blend and 0.10%(w/w) in the B20 diesel (concentration range: 0.00%-13.80%(w/w)). Additionally, in the models for the determination of animal fat biodiesel in blends with soybean diesel, PLS and SVR showed evidence of systematic errors, and PLS/siPLS presented trends in residuals based on the permutation test. For the B20 diesel, PLS presented evidence of systematic errors, and siPLS presented trends in the residuals.


Subject(s)
Biofuels , Fats , Glycine max , Spectroscopy, Near-Infrared/methods , Support Vector Machine , Animals , Calibration , Models, Theoretical
9.
J Affect Disord ; 150(3): 1213-6, 2013 Sep 25.
Article in English | MEDLINE | ID: mdl-23769292

ABSTRACT

BACKGROUND: Recently, machine learning methods have been used to discriminate, on an individual basis, patients from healthy controls through brain structural magnetic resonance imaging (MRI). However, the application of these methods to predict the severity of psychiatric symptoms is less common. METHODS: Herein, support vector regression (SVR) was employed to evaluate whether gray matter volumes encompassing cortical-subcortical loops contain discriminative information to predict obsessive-compulsive disorder (OCD) symptom severity in 37 treatment-naïve adult OCD patients. RESULTS: The Pearson correlation coefficient between predicted and observed symptom severity scores was 0.49 (p=0.002) for total Dimensional Yale-Brown Obsessive-Compulsive Scale (DY-BOCS) and 0.44 (p=0.006) for total Yale-Brown Obsessive-Compulsive Scale (Y-BOCS). The regions that contained the most discriminative information were the left medial orbitofrontal cortex and the left putamen for both scales. LIMITATIONS: Our sample is relatively small and our results must be replicated with independent and larger samples. CONCLUSIONS: These results indicate that machine learning methods such as SVR analysis may identify neurobiological markers to predict OCD symptom severity based on individual structural MRI datasets.


Subject(s)
Cerebral Cortex/pathology , Obsessive-Compulsive Disorder/diagnosis , Adolescent , Adult , Artificial Intelligence , Female , Humans , Magnetic Resonance Imaging , Male , Middle Aged , Neuroimaging , Obsessive-Compulsive Disorder/pathology , Obsessive-Compulsive Disorder/psychology , Prognosis , Putamen/pathology , Severity of Illness Index , Young Adult
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