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1.
Viruses ; 16(7)2024 Jun 25.
Article in English | MEDLINE | ID: mdl-39066180

ABSTRACT

Since the significance of viral infections in children and adolescents with nephrotic syndrome (NS) is yet to be defined, this study intended to estimate the occurrence, pattern, and outcomes of some DNA viral infections in children with NS. METHODS: A prospective study was conducted to determine the genome identification of the viruses Epstein-Barr (EBV), human cytomegalovirus (HCMV), human herpesvirus 6 (HHV-6 type A and type B) and 7 (HHV-7), polyomavirus (BKV), and human adenovirus (HAdV) in plasma and urine samples of pediatric patients with NS. RESULTS: A total of 35 patients aged 1 to 18 years with NS and under immunosuppressant drugs participated in the study. Plasma and urine samples were collected at regular intervals during a median follow-up of 266 days (range 133-595), and DNA was analyzed to detect the selected DNA viruses. Eleven patients (31.4%) had active virus infections, and patterns were classified as coinfection, recurrent, and consecutive. Of these, six patients (54.5%) presented viral coinfection, six (54.5%) viral recurrence, and seven patients (63.3%) had viral consecutive infection. Ten of the eleven patients with active infection had a proteinuria relapse (91%) and eight (72.7%) were hospitalized (p = 0.0022). Active HCMV infection was the most frequent infection and was observed in six patients (54.5%), three of the eleven patients (27.2%) had suspected HCMV disease in the gastrointestinal tract, and one had HHV-7 coinfection. The frequency of other infections was: 9% for HHV-6, 45.5% for BKV, 27.3% for HHV-7, 18.2% for EBV, and 18.2% for HAdV. CONCLUSION: viral infections, especially HCMV, can be an important cause of morbidity and nephrotic syndrome relapse in children.


Subject(s)
BK Virus , Nephrotic Syndrome , Humans , Nephrotic Syndrome/virology , Nephrotic Syndrome/complications , Adolescent , Child , Male , Female , Child, Preschool , BK Virus/genetics , BK Virus/isolation & purification , Infant , Prospective Studies , DNA, Viral/genetics , Herpesviridae/genetics , Herpesviridae/classification , Herpesviridae/isolation & purification , Coinfection/virology , Herpesviridae Infections/virology , Adenoviridae/genetics , Adenoviridae/isolation & purification , Adenoviridae/classification
2.
Viruses ; 15(7)2023 07 22.
Article in English | MEDLINE | ID: mdl-37515291

ABSTRACT

In the present study, 31 samples (12 fecal, 9 nasal and 10 rectal swabs) from 28/92 (30.43%, 10 captive and 18 free-roaming African green monkeys (AGMs, Chlorocebus sabaeus)) apparently healthy AGMs in the Caribbean Island of St. Kitts tested positive for adenoviruses (AdVs) by DNA-dependent DNA polymerase (pol)-, or hexon-based screening PCR assays. Based on analysis of partial deduced amino acid sequences of Pol- and hexon- of nine AGM AdVs, at least two AdV genetic variants (group-I: seven AdVs with a Simian mastadenovirus-F (SAdV-F)/SAdV-18-like Pol and hexon, and group-II: two AdVs with a SAdV-F/SAdV-18-like Pol and a Human mastadenovirus-F (HAdV-F)/HAdV-40-like hexon) were identified, which was corroborated by analysis of the nearly complete putative Pol, complete hexon, and partial penton base sequences of a representative group-I (strain KNA-08975), and -II (KNA-S6) AdV. SAdV-F-like AdVs were reported for the first time in free-roaming non-human primates (NHPs) and after ~six decades from captive NHPs. Molecular characterization of KNA-S6 (and the other group-II AdV) indicated possible recombination and cross-species transmission events involving SAdV-F-like and HAdV-F-like viruses, corroborating the hypothesis that the evolutionary pathways of HAdVs and SAdVs are intermingled, complicated by recombination and inter-species transmission events, especially between related AdV species, such as HAdV-F and SAdV-F. To our knowledge, this is the first report on detection and molecular characterization of AdVs in AGMs.


Subject(s)
Adenoviridae Infections , Adenoviridae , Chlorocebus aethiops , Monkey Diseases , Adenoviridae/classification , Adenoviridae/genetics , Adenoviridae/isolation & purification , Animals , Animals, Wild , Saint Kitts and Nevis , Phylogeny , Adenoviridae Infections/transmission , Adenoviridae Infections/veterinary , Adenoviridae Infections/virology , Monkey Diseases/transmission , Monkey Diseases/virology , Animals, Zoo
3.
Viruses ; 13(11)2021 10 30.
Article in English | MEDLINE | ID: mdl-34835000

ABSTRACT

Using a broad-range nested PCR assay targeting the DNA-dependent DNA polymerase (pol) gene, we detected adenoviruses in 17 (20.48%) out of 83 fecal samples from small Indian mongooses (Urva auropunctata) on the Caribbean island of St. Kitts. All 17 PCR amplicons were sequenced for the partial pol gene (~300 bp, hereafter referred to as Mon sequences). Fourteen of the 17 Mon sequences shared maximum homology (98.3-99.6% and 97-98.9% nucleotide (nt) and deduced amino acid (aa) sequence identities, respectively) with that of bovine adenovirus-6 (species Bovine atadenovirus E). Mongoose-associated adenovirus Mon-39 was most closely related (absolute nt and deduced aa identities) to an atadenovirus from a tropical screech owl. Mon-66 shared maximum nt and deduced aa identities of 69% and 71.4% with those of atadenoviruses from a spur-thighed tortoise and a brown anole lizard, respectively. Phylogenetically, Mon-39 and Mon-66 clustered within clades that were predominated by atadenoviruses from reptiles, indicating a reptilian origin of these viruses. Only a single mongoose-associated adenovirus, Mon-34, was related to the genus Mastadenovirus. However, phylogenetically, Mon-34 formed an isolated branch, distinct from other mastadenoviruses. Since the fecal samples were collected from apparently healthy mongooses, we could not determine whether the mongoose-associated adenoviruses infected the host. On the other hand, the phylogenetic clustering patterns of the mongoose-associated atadenoviruses pointed more towards a dietary origin of these viruses. Although the present study was based on partial pol sequences (~90 aa), sequence identities and phylogenetic analysis suggested that Mon-34, Mon-39, and Mon-66 might represent novel adenoviruses. To our knowledge, this is the first report on the detection and molecular characterization of adenoviruses from the mongoose.


Subject(s)
Adenoviridae/classification , Adenoviridae/genetics , Adenoviridae/isolation & purification , Herpestidae/virology , Adenoviridae Infections/veterinary , Adenoviridae Infections/virology , Amino Acid Sequence , Animals , Atadenovirus/classification , Atadenovirus/genetics , Atadenovirus/isolation & purification , DNA-Directed DNA Polymerase , Feces/virology , Lizards/virology , Mastadenovirus/classification , Mastadenovirus/genetics , Mastadenovirus/isolation & purification , Phylogeny , Polymerase Chain Reaction , Turtles/virology , West Indies
4.
Int J Obes (Lond) ; 44(11): 2303-2312, 2020 11.
Article in English | MEDLINE | ID: mdl-32826973

ABSTRACT

BACKGROUND: Infection by Adenovirus 36 (Ad-36) has been associated with adipogenesis using cell and animal models, and a high risk of developing obesity has been reported in Ad-36-seropositive individuals. However, molecular mechanisms involved in the maintenance over the years of adipogenesis associated with Ad-36 has not been investigated in human adipose tissue. Epigenetic mechanisms, such as micro-RNAs (miRNAs) that regulate gene expression at the post-transcriptional level, have shown an important role in the development and maintenance of metabolic diseases. AIM: This study investigated the expression of miRNA associated with the adipogenic process in visceral adipose tissue from obese individuals according to Ad-36 serology. METHODS: Obese individuals were separated according to their status of Ad-36 serology in seropositive (Ad-36 (+); n = 29) and seronegative (Ad-36 (-); n = 28) groups. Additionally, a group of lean controls (n = 17) was selected to compare with obese individuals. Biopsies of visceral adipose tissue were obtained to evaluate miRNA and gene expression. The study of Ad-36 serology was carried out by ELISA. The expression of pro-adipogenic (miR-17 and miR-210) and anti-adipogenic (miR-155, miR-130 and miR-27a) miRNAs was evaluated using Taqman advanced miRNA assays by qPCR. The expression of adipogenes encoding LEP, ADIPOQ, and PPARγ was evaluated by Taqman predesigned assays through qPCR. RESULTS: The obese group had higher LEP (p < 0.001) and PPARγ (p = 0.016) expression and lower ADIPOQ expression (p = 0.017), and also had higher expression of miR-210 (p = 0.039), whereas lower expression of miR-155 (p = 0.019) and miR-27a (p = 0.028) as compared to lean controls. Higher PPARγ expression (p = 0.008), but no influence on LEP or ADIPOQ expression was observed in Ad-36 (+) group. Those seropositive individuals also had higher expression of the miR-17 (p = 0.028) and lower levels of miR-155 (p = 0.031) in adipose tissue as compared to seronegative subjects. CONCLUSIONS: Individuals with previous infection by Ad-36 had higher expression of the pro-adipogenic miR-17 and lower expression of the anti-adipogenic miR-155, which could lead to an increased adipogenic status by positively modulating PPARγ expression in adipose tissue from obese subjects.


Subject(s)
Adenoviridae/classification , Intra-Abdominal Fat/metabolism , MicroRNAs/genetics , Obesity, Morbid/genetics , Adult , Case-Control Studies , Chile , Female , Humans , Male , Middle Aged , Obesity, Morbid/virology , PPAR gamma/metabolism
5.
PLoS One ; 15(2): e0229415, 2020.
Article in English | MEDLINE | ID: mdl-32109945

ABSTRACT

Avian adenoviruses (AdVs) are a very diverse group of pathogens causing diseases in poultry and wild birds. Wild birds, endangered by habitat loss and habitat fragmentation in the tropical forests, are recognised to play a role in the transmission of various AdVs. In this study, two novel, hitherto unknown AdVs were described from faecal samples of smooth-billed ani and tropical screech owl. The former was classified into genus Aviadenovirus, the latter into genus Atadenovirus, and both viruses most probably represent new AdV species as well. These results show that there is very limited information about the biodiversity of AdVs in tropical wild birds, though viruses might have a major effect on the population of their hosts or endanger even domesticated animals. Surveys like this provide new insights into the diversity, evolution, host variety, and distribution of avian AdVs.


Subject(s)
Adenoviridae Infections/veterinary , Adenoviridae/genetics , Adenoviridae/isolation & purification , Birds/virology , DNA, Viral/analysis , Strigiformes/virology , Adenoviridae/classification , Adenoviridae Infections/virology , Animals , Birds/genetics , DNA, Viral/genetics , Phylogeny , Strigiformes/genetics
6.
Arch Virol ; 164(4): 1015-1025, 2019 Apr.
Article in English | MEDLINE | ID: mdl-30740637

ABSTRACT

Bats play a significant role in maintaining their ecosystems through pollination, dispersal of seeds, and control of insect populations, but they are also known to host many microorganisms and have been described as natural reservoirs for viruses with zoonotic potential. The diversity of viruses in these animals remains largely unknown, however, because studies are limited by species, location, virus target, or sample type. Therefore, the aim of this study was to detect fragments of viral genomes in bat samples. We performed high-throughput sequencing analysis and specific PCR and RT-PCR on pools of anal and oropharyngeal swabs from Artibeus lituratus and Sturnira lilium collected in southern Brazil. As a result, a member of the family Adenoviridae related to human adenovirus C was detected in anal swabs from S. lilium. In addition, we detected a papillomavirus in an anal swab from A. lituratus. Our analyses also allowed the detection of adenoviruses and parvoviruses in oropharyngeal swabs collected from A. lituratus. These results increase our knowledge about viral diversity and illustrate the importance of conducting virus surveillance in bats.


Subject(s)
Adenoviridae Infections/veterinary , Adenoviridae/isolation & purification , Chiroptera/virology , Papillomaviridae/isolation & purification , Papillomavirus Infections/veterinary , Parvoviridae Infections/veterinary , Parvovirus/isolation & purification , Adenoviridae/classification , Adenoviridae/genetics , Adenoviridae Infections/virology , Animals , Brazil , Genome, Viral , Humans , Papillomaviridae/classification , Papillomaviridae/genetics , Papillomavirus Infections/virology , Parvoviridae Infections/virology , Parvovirus/classification , Parvovirus/genetics , Phylogeny
7.
J Med Virol ; 91(5): 744-750, 2019 05.
Article in English | MEDLINE | ID: mdl-30614007

ABSTRACT

Acute gastroenteritis (AGE) is a significant cause of child mortality worldwide. In Brazil, despite the reduction in infant mortality achieved in recent years, many children still die because of undiagnosed AGE. The prevalence, viral load, and circulating genotypes of rotavirus A (RVA), human adenovirus (HAdV), and norovirus GII (NoV GII) were investigated in children with AGE during 12 months in Vitoria, Espírito Santo, Southeastern Brazil. Enteric viruses were detected in stool samples, quantified by quantitative polymerase chain reaction, sequenced, and compared phylogenetically. The overall prevalence was 93.3% (125/134). Cases of single infection (41.8%) and mixed infection (51.5%) were observed; in 21.6% of cases, all the three viruses were detected. RVA had the highest number of copies in all infections. Phylogenetic analysis revealed predominantly the presence of RVA genotype G3, followed by G2 and G9. HAdV clustered within subgroup C, but some samples harbored subgroups A, D, or F. All sequenced NoV-positive samples clustered within the prevalent genotype GII.4. The high prevalence of RVA, HAdV, and NoV in diarrheal feces clarifies the etiology of AGE in this population, and the presence of RVA in vaccinated children reinforces the importance of monitoring programs to identify the causes of gastroenteritis and contribute to the reliability of diagnosis.


Subject(s)
Adenoviridae Infections/epidemiology , Adenoviridae/classification , Caliciviridae Infections/epidemiology , Gastroenteritis/epidemiology , Norovirus/classification , Rotavirus Infections/epidemiology , Rotavirus/classification , Adenoviridae/genetics , Adenoviridae/isolation & purification , Adenoviridae Infections/virology , Aged , Brazil/epidemiology , Caliciviridae Infections/virology , Child , Child, Preschool , Cross-Sectional Studies , Female , Gastroenteritis/virology , Genotype , Humans , Infant , Infant, Newborn , Male , Norovirus/genetics , Norovirus/isolation & purification , Prevalence , Rotavirus/genetics , Rotavirus/isolation & purification , Rotavirus Infections/virology , Viral Load
8.
FEMS Microbiol Lett ; 365(20)2018 10 01.
Article in English | MEDLINE | ID: mdl-30239707

ABSTRACT

This study aimed to evaluate viral and bacterial contamination from typical Brazilian cheeses, such as Minas (fresh) and Prato (ripened), commercially obtained in the Greater Metropolitan Region of the State of Rio de Janeiro, Brazil. Minas [30], Prato [30] and sliced Prato [30] cheese samples were investigated for norovirus genogroup I and II (NoV GI-II) and human adenovirus (HAdV) by direct nucleic acid extraction using TRIzol and amplification by TaqMan based quantitative polymerase chain reaction. Listeria monocytogenes, Salmonella spp., coagulase-positive staphylococci (CPS) and fecal coliforms were also assessed by using standard counting methods. NoV GI and GII were detected in one sample (1.1%) each and HAdV in nine samples (10.0%) while bacteriological analysis revealed five samples (5.5%) contaminated with L. monocytogenes, 27 (30.0%) with fecal coliforms and 10 (11.1%) with CPS. Salmonella spp. was not detected in any sample. Viruses were detected in 11 samples (12.2%), of which 9 met the microbiological criteria used to evaluate the microbiological quality of the cheeses, stressing the importance of considering virological parameters for monitoring this food matrix.


Subject(s)
Adenoviridae/isolation & purification , Bacteria/classification , Bacteria/isolation & purification , Cheese/microbiology , Cheese/virology , Norovirus/isolation & purification , Adenoviridae/classification , Adenoviridae/genetics , Bacterial Load , Brazil , DNA, Viral/genetics , DNA, Viral/isolation & purification , Food Contamination , Humans , Norovirus/classification , Norovirus/genetics , RNA, Viral/genetics , RNA, Viral/isolation & purification , Real-Time Polymerase Chain Reaction
9.
Virus Genes ; 54(6): 818-822, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30238313

ABSTRACT

Adenoviruses are important pathogens known to infect vertebrate hosts, including a wide range of primates. Despite its importance, data on the diversity of these viruses in non-human primates living in their natural habitat remain scarce. In this study, we conducted a surveillance of adenoviral infection in wild black howler monkeys from two protected natural areas in Mexico. This was achieved by analyzing 67 fecal samples using a nested PCR that targets the adenovirus DNA polymerase gene. Adenoviral DNA was detected in 12 samples from both study sites, with an overall prevalence of 17.9%. The amplified DNA sequences shared 100% nucleotide identity and phylogenetic analyses revealed that the haplotype detected was novel, and clustered with Platyrrhini mastadenovirus A, which was previously described in captive New World monkeys. Our data, along with the previous evidence, confirm that monkeys native to the Americas are the original hosts of these adenoviruses.


Subject(s)
Adenoviridae Infections/veterinary , Adenoviridae/genetics , Alouatta/virology , Monkey Diseases/diagnosis , Monkey Diseases/virology , Adenoviridae/classification , Animals , Female , Male , Monkey Diseases/epidemiology , Phylogeny
10.
Braz. j. infect. dis ; Braz. j. infect. dis;21(4): 391-395, July-Aug. 2017. tab
Article in English | LILACS | ID: biblio-888889

ABSTRACT

Abstract Background: Viral conjunctivitis are the most frequent infections in ophthalmology clinics. The diagnosis is usually relying on clinical findings and medical history. However, topical antibiotics are often used unnecessarily addition to symptomatic treatment because of unsure agents. We aimed to detect the Adenovirus, Coxsackievirus and Enterovirus from conjunctiva and pharyngeal samples of patients. Methods: The conjunctiva and pharyngeal samples of the patients with conjunctivitis were taken by Virocult transport media and kept at -80 ºC up to study day. Adenovirus spp, Enterovirus 70 and Enterovirus 71, Coxsackie A24 and Coxsackie A16 were detected by real-time PCR. Samples from healthy health care workers of ophthalmology clinic were used for control group. Results: A total of 176 samples (conjunctival and pharyngeal samples of 62 patient and 26 healthy subjects) were included. The mean age of 34 (55.7%) male and 27 (44.3%) female patients was 34 ± 17. Twenty five (40.3%) of the patients were receiving antibiotic drops at first visit. The main etiologic agent in conjunctival samples was found to be Adenovirus (46/62, 74.2%) followed by Enterovirus 70 (4/62, 6.4%) and Enterovirus 71 (4/62, 6.4%). Coxsackievirus 16 and 24 were also found in 2 patients (1/62 each, 1.6%). Pharyngeal samples were also positive for Adenovirus (20/62, 32.3%), Enterovirus 70 and 71 (7/62, 11.3% and 5/62, 8.1% respectively), Coxsackievirus 16 and 24 (2/62, 3.2% and 1/61, 1.6%). Conclusions: It is very difficult in viral conjunctivitis to make clinical differentiation caused by different agents because of common clinical signs and symptoms. In routine clinical work, the viral conjunctivitis usually related with Adenovirus. But almost one fourth of the patients' conjunctivitis were not related to Adenovirus, which shows the importance of the laboratory diagnostics. True diagnosis plays an important role on prevention of contamination and unnecessary use of antibiotics in viral conjunctivitis.


Subject(s)
Humans , Male , Female , Adult , Pharynx/virology , DNA, Viral/isolation & purification , Adenoviridae/isolation & purification , Conjunctivitis, Viral/virology , Enterovirus/isolation & purification , Case-Control Studies , Adenoviridae/classification , Adenoviridae/genetics , Polymerase Chain Reaction , Acute Disease , Prospective Studies , Enterovirus/classification , Enterovirus/genetics
11.
Braz J Infect Dis ; 21(4): 391-395, 2017.
Article in English | MEDLINE | ID: mdl-28535396

ABSTRACT

BACKGROUND: Viral conjunctivitis are the most frequent infections in ophthalmology clinics. The diagnosis is usually relying on clinical findings and medical history. However, topical antibiotics are often used unnecessarily addition to symptomatic treatment because of unsure agents. We aimed to detect the Adenovirus, Coxsackievirus and Enterovirus from conjunctiva and pharyngeal samples of patients. METHODS: The conjunctiva and pharyngeal samples of the patients with conjunctivitis were taken by Virocult transport media and kept at -80̊C up to study day. Adenovirus spp, Enterovirus 70 and Enterovirus 71, Coxsackie A24 and Coxsackie A16 were detected by real-time PCR. Samples from healthy health care workers of ophthalmology clinic were used for control group. RESULTS: A total of 176 samples (conjunctival and pharyngeal samples of 62 patient and 26 healthy subjects) were included. The mean age of 34 (55.7%) male and 27 (44.3%) female patients was 34±17. Twenty five (40.3%) of the patients were receiving antibiotic drops at first visit. The main etiologic agent in conjunctival samples was found to be Adenovirus (46/62, 74.2%) followed by Enterovirus 70 (4/62, 6.4%) and Enterovirus 71 (4/62, 6.4%). Coxsackievirus 16 and 24 were also found in 2 patients (1/62 each, 1.6%). Pharyngeal samples were also positive for Adenovirus (20/62, 32.3%), Enterovirus 70 and 71 (7/62, 11.3% and 5/62, 8.1% respectively), Coxsackievirus 16 and 24 (2/62, 3.2% and 1/61, 1.6%). CONCLUSIONS: It is very difficult in viral conjunctivitis to make clinical differentiation caused by different agents because of common clinical signs and symptoms. In routine clinical work, the viral conjunctivitis usually related with Adenovirus. But almost one fourth of the patients' conjunctivitis were not related to Adenovirus, which shows the importance of the laboratory diagnostics. True diagnosis plays an important role on prevention of contamination and unnecessary use of antibiotics in viral conjunctivitis.


Subject(s)
Adenoviridae/isolation & purification , Conjunctivitis, Viral/virology , DNA, Viral/isolation & purification , Enterovirus/isolation & purification , Pharynx/virology , Acute Disease , Adenoviridae/classification , Adenoviridae/genetics , Adult , Case-Control Studies , Enterovirus/classification , Enterovirus/genetics , Female , Humans , Male , Polymerase Chain Reaction , Prospective Studies
12.
Sci Total Environ ; 586: 304-312, 2017 May 15.
Article in English | MEDLINE | ID: mdl-28185736

ABSTRACT

Rio de Janeiro's inner and coastal waters are heavily impacted by human sewage pollution for decades. Enteric viruses, including human adenoviruses (HAdV), human enterovirus (EV), group A rotavirus (RV) and hepatitis A virus (HAV) are more likely to be found in contaminated surface waters. The present work aimed to assess the frequency and loads of EV, HAdV-C and -F species, RV and HAV in sand and water samples from venues used during the 2016 Summer Olympics and by tourists attending the event. Sixteen monthly collections were carried out from March 2015 to July 2016 in 12 different sites from Rio de Janeiro, Brazil. Total and thermotolerant coliform counting was performed along molecular detection of virus was performed using quantitative polymerase chain reaction (qPCR). Analyses of all samples were further investigated by integrated cell culture PCR to check about the presence of HAdV infectious virus particles. The results show that 95.9% of water samples showed contamination with at least one type of virus. Regarding the viruses individually (% for water and sand respectively): HAdV-C (93.1%-57.8%), HAdV-F (25.3%-0%), RV (12.3%-4.4%), EV (26.7%-8.8%) and HAV (0%). The viral loads ranged from 103gc/L up to 109gc/L (water), and 103gc/g to 106gc/g (sand). In the phylogenetic tree, were classified into four main clusters, referring to species C, D, F and BAdV. And up to 90% of sites studied presented at least once presence of infectious HAdV-C. The most contaminated points were the Rodrigo de Freitas Lagoon, where Olympic rowing took place, and the Marina da Glória, the starting point for the sailing races, demonstrating serious problem of fecal contamination of water resources and threatens the health of Olympic athletes, tourists and residents.


Subject(s)
Adenoviridae/classification , Enterovirus/classification , Water Microbiology , Water Pollution , Anniversaries and Special Events , Brazil , Environmental Monitoring , Feces , Humans , Phylogeny , Sports
13.
Braz J Microbiol ; 46(3): 715-23, 2015.
Article in English | MEDLINE | ID: mdl-26413052

ABSTRACT

Adenoviruses are among the most promising viral markers of fecal contamination. They are frequently found in the water, sediment and soil of regions impacted by human activity. Studies of the bioaccumulation of enteric viruses in shrimp are scarce. The cities located in the northern coast of the lake systems in Southern Brazil have high urbanization and intensive farming rates, and poor sewage collection and treatment. One hundred (n = 100) Farfantepenaeus paulensis pink-shrimp specimens and 48 water samples were collected from coastal lagoons between June 2012 and May 2013. Water samples were concentrated and the shrimp, mashed. After DNA extraction, samples were analyzed by real time polymerase chain reaction (qPCR) in order to detect and quantify viral genomes. Thirty-five percent of shrimp samples were positive for contamination, predominantly by avian adenoviruses. A total of 91.7% of water samples contained adenoviruses DNA, with the human form being the most frequent. Our results provided evidence of significant bioaccumulation of adenoviruses in shrimp, showing the extent of the impact of fecal pollution on aquatic ecosystems.


Subject(s)
Adenoviridae/classification , Adenoviridae/isolation & purification , Feces/virology , Penaeidae/virology , Water Pollution , Animals , Brazil , Ecosystem , Geography , Real-Time Polymerase Chain Reaction , Sewage/virology
14.
Braz. j. microbiol ; Braz. j. microbiol;46(3): 715-723, July-Sept. 2015. tab, ilus
Article in English | LILACS | ID: lil-755819

ABSTRACT

Adenoviruses are among the most promising viral markers of fecal contamination. They are frequently found in the water, sediment and soil of regions impacted by human activity. Studies of the bioaccumulation of enteric viruses in shrimp are scarce. The cities located in the northern coast of the lake systems in Southern Brazil have high urbanization and intensive farming rates, and poor sewage collection and treatment. One hundred (n = 100) Farfantepenaeus paulensis pink-shrimp specimens and 48 water samples were collected from coastal lagoons between June 2012 and May 2013. Water samples were concentrated and the shrimp, mashed. After DNA extraction, samples were analyzed by real time polymerase chain reaction (qPCR) in order to detect and quantify viral genomes. Thirty-five percent of shrimp samples were positive for contamination, predominantly by avian adenoviruses. A total of 91.7% of water samples contained adenoviruses DNA, with the human form being the most frequent. Our results provided evidence of significant bioaccumulation of adenoviruses in shrimp, showing the extent of the impact of fecal pollution on aquatic ecosystems.

.


Subject(s)
Animals , Adenoviridae/classification , Adenoviridae/isolation & purification , Feces/virology , Penaeidae/virology , Water Pollution , Brazil , Ecosystem , Geography , Real-Time Polymerase Chain Reaction , Sewage/virology
15.
Braz. j. microbiol ; Braz. j. microbiol;46(3): l7235-723, July-Sept. 2015. tab, ilus
Article in English | LILACS, VETINDEX | ID: biblio-1469613

ABSTRACT

Adenoviruses are among the most promising viral markers of fecal contamination. They are frequently found in the water, sediment and soil of regions impacted by human activity. Studies of the bioaccumulation of enteric viruses in shrimp are scarce. The cities located in the northern coast of the lake systems in Southern Brazil have high urbanization and intensive farming rates, and poor sewage collection and treatment. One hundred (n = 100) Farfantepenaeus paulensis pink-shrimp specimens and 48 water samples were collected from coastal lagoons between June 2012 and May 2013. Water samples were concentrated and the shrimp, mashed. After DNA extraction, samples were analyzed by real time polymerase chain reaction (qPCR) in order to detect and quantify viral genomes. Thirty-five percent of shrimp samples were positive for contamination, predominantly by avian adenoviruses. A total of 91.7% of water samples contained adenoviruses DNA, with the human form being the most frequent. Our results provided evidence of significant bioaccumulation of adenoviruses in shrimp, showing the extent of the impact of fecal pollution on aquatic ecosystems..


Subject(s)
Animals , Adenoviridae/classification , Adenoviridae/isolation & purification , Feces/virology , Penaeidae/virology , Water Pollution , Brazil , Ecosystem , Sewage/virology , Geography , Real-Time Polymerase Chain Reaction
16.
Braz. J. Microbiol. ; 46(3): l7235, July-Sept. 2015. tab, ilus
Article in English | VETINDEX | ID: vti-5172

ABSTRACT

Adenoviruses are among the most promising viral markers of fecal contamination. They are frequently found in the water, sediment and soil of regions impacted by human activity. Studies of the bioaccumulation of enteric viruses in shrimp are scarce. The cities located in the northern coast of the lake systems in Southern Brazil have high urbanization and intensive farming rates, and poor sewage collection and treatment. One hundred (n = 100) Farfantepenaeus paulensis pink-shrimp specimens and 48 water samples were collected from coastal lagoons between June 2012 and May 2013. Water samples were concentrated and the shrimp, mashed. After DNA extraction, samples were analyzed by real time polymerase chain reaction (qPCR) in order to detect and quantify viral genomes. Thirty-five percent of shrimp samples were positive for contamination, predominantly by avian adenoviruses. A total of 91.7% of water samples contained adenoviruses DNA, with the human form being the most frequent. Our results provided evidence of significant bioaccumulation of adenoviruses in shrimp, showing the extent of the impact of fecal pollution on aquatic ecosystems..(AU)


Subject(s)
Animals , Adenoviridae/classification , Adenoviridae/isolation & purification , Feces/virology , Penaeidae/virology , Water Pollution , Brazil , Ecosystem , Geography , Real-Time Polymerase Chain Reaction , Sewage/virology
17.
Arch Virol ; 160(8): 1923-30, 2015 Aug.
Article in English | MEDLINE | ID: mdl-26026957

ABSTRACT

The aim of the study was to diagnose infections with rotavirus and other enteric pathogens in children under five years old with acute gastroenteritis and to identify the most common epidemiological and clinical characteristics of these pathogens. The study was conducted using 110 stool samples from the same number of children under five years old who were inpatients at three paediatric hospitals in Havana, Cuba, between October and December 2011. The samples were tested for rotavirus and other enteric pathogens using traditional and molecular microbiological methods. Pathogens were detected in 85 (77.3 %) of the children. Rotavirus was the most commonly found, appearing in 54.5 % of the children, followed by bacteria (29 %) and parasites (10.9 %). Other viral pathogens detected included adenovirus (6.4 %) and astrovirus (3.6 %). In rotavirus-positives cases, at least one other pathogen was detected, usually a bacterium (26.6 %). More than three episodes of watery diarrhea in 24 hours were observed in 78.3 % of the cases. Dehydration was found in 30 (50 %) rotavirus-positive children, of whom seven (11.6 %) were transferred to an intensive care unit due to complications of metabolic acidosis. Rotavirus was most commonly observed among children under 12 months old (65 %). The highest incidence of infection occurred in children who were under the care of a relative at home (78.3 %), had not been breastfed (65 %), or had been breastfed for less than six months (28.3 %). The genotype combinations most frequently found were G9P8 (28.3 %) and G1P8 (10 %). This study demonstrates the presence of rotavirus and other enteric pathogens as causes of gastroenteritis in hospitalized infants and young children in Cuba.


Subject(s)
Adenoviridae Infections/virology , Adenoviridae/isolation & purification , Astroviridae Infections/virology , Astroviridae/isolation & purification , Enterovirus/isolation & purification , Gastroenteritis/virology , Rotavirus Infections/virology , Rotavirus/isolation & purification , Acute Disease , Adenoviridae/classification , Adenoviridae/genetics , Astroviridae/classification , Astroviridae/genetics , Child , Child, Preschool , Cuba , Enterovirus/classification , Enterovirus/genetics , Feces/virology , Female , Hospitalization , Humans , Infant , Infant, Newborn , Male , Rotavirus/classification , Rotavirus/genetics
18.
PLoS One ; 7(10): e46898, 2012.
Article in English | MEDLINE | ID: mdl-23056519

ABSTRACT

BACKGROUND: Currently, there is a paucity of data regarding human adenovirus (HAdv) circulation in Andean regions of South America. To address this shortcoming, we report the clinical, phylogenetic, and epidemiologic characteristics of HAdv respiratory tract infection from a large sentinel surveillance study conducted among adults and children in Peru. METHODS/PRINCIPAL FINDINGS: Oropharyngeal swabs were collected from participants visiting any of 38 participating health centers, and viral pathogens were identified by immunofluorescence assay in cell culture. In addition, molecular characterization was performed on 226 randomly selected HAdv samples. Between 2000 and 2010, a total of 26,375 participants with influenza-like illness (ILI) or severe acute respiratory infection (SARI) were enrolled in the study. HAdv infection was identified in 2.5% of cases and represented 6.2% of all viral pathogens. Co-infection with a heterologous virus was found in 15.5% of HAdv cases. HAdv infection was largely confined to children under the age of 15, representing 88.6% of HAdv cases identified. No clinical characteristics were found to significantly distinguish HAdv infection from other respiratory viruses. Geographically, HAdv infections were more common in sites from the arid coastal regions than in the jungle or highland regions. Co-circulation of subgroups B and C was observed each year between 2006 and 2010, but no clear seasonal patterns of transmission were detected. CONCLUSIONS/SIGNIFICANCE: HAdv accounted for a significant fraction of those presenting with ILI and SARI in Peru and tended to affect the younger population disproportionately. Longitudinal studies will help better characterize the clinical course of patients with HAdv in Peru, as well as determine the role of co-infections in the evolution of illness.


Subject(s)
Adenoviridae Infections/epidemiology , Adenoviridae/physiology , Respiratory Tract Diseases/virology , Adenoviridae/classification , Adenoviridae/genetics , Adenoviridae Infections/pathology , Adolescent , Adult , Child , Child, Preschool , Epidemiological Monitoring , Female , Genotype , Humans , Infant , Infant, Newborn , Male , Middle Aged , Peru/epidemiology , Phylogeny , Seasons , Young Adult
19.
J Water Health ; 10(3): 445-52, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22960488

ABSTRACT

Animal and human wastewater can potentially contaminate water sources and the treatment of drinking water may not effectively remove all contaminants, especially viruses. The purpose of the present study was to evaluate the viral contamination of water used for human and animal consumption in the city of Concórdia, located in southern Brazil. Porcine circovirus type 2 (PCV2), porcine adenovirus (PAdV), human adenovirus (HAdV) and human norovirus (NoV) were searched for using quantitative polymerase chain reaction (qPCR). HAdV-positive samples were tested for viral infectivity by plaque assay. The qPCR results showed that PAdV, PCV2 and HAdV genetic material were present in all sampling sites. NoV was absent in all samples. The presence of genetic material from PAdV and PCV2 was detected in 30% and 45% of the 36 analyzed samples, respectively, with an average of 10(2) gc mL(-1) for PAdV and 10(4) gc mL(-1) for PCV2. HAdV was present in 100% of the samples, with an average of 10(4) gc mL(-1). However, in plaque assay, only 36% of the samples were positive. As viable particles of HAdV were found in drinking water, these results confirm that swine manure and human sewage impact surface water and groundwater, endangering water quality and indicating a potential risk to public health.


Subject(s)
Adenoviridae/isolation & purification , Circovirus/isolation & purification , Norovirus/isolation & purification , Swine Diseases/virology , Water Microbiology , Adenoviridae/classification , Animals , Brazil , Drinking Water , Humans , Norovirus/classification , Reverse Transcriptase Polymerase Chain Reaction , Swine , Swine Diseases/epidemiology , Water Supply
20.
Arq Bras Endocrinol Metabol ; 53(2): 159-64, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19466208

ABSTRACT

The role of infection on obesity development has been questioned since the early 1980's. Several studies on animals have shown that physiopathologic mechanisms through which infections can produce obesity do exist. At least eight types of obesity-inducing viruses have been identified in animals, especially poultry and mice. Studies on humans are far less convincing; however, two adenoviruses, Ad-36 and SMAM-1, have shown adipogenic properties. In vitro studies with 3T3-L1 cells stated the activation of the enzymatic pathway that leads to fatty tissue accumulation; in vivo studies have also detected higher levels of antibodies against such viruses on obese subjects. Although most known infections nowadays cause obesity through central nervous system lesions, the Ad-36 adenovirus infection affects fatty tissue directly, raising doubts regarding central role component in this case.


Subject(s)
Adenoviridae Infections/complications , Obesity/virology , 3T3-L1 Cells , Adenoviridae/classification , Adenoviridae/physiology , Adenoviridae Infections/physiopathology , Adenovirus Infections, Human/complications , Adenovirus Infections, Human/physiopathology , Adenoviruses, Human/classification , Adenoviruses, Human/physiology , Adipogenesis/physiology , Adipose Tissue/metabolism , Animals , Chickens , Dogs , Humans , Mice , Obesity/metabolism
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