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1.
Postepy Biochem ; 70(3): 413-419, 2024 09 30.
Article in Polish | MEDLINE | ID: mdl-39365573

ABSTRACT

Thyroid is an endocrine gland that is responsible for producing and releasing two hormones: triiodothyronine (T3) and thyroxine (T4). Hypothyroidism as the disorder happens when the synthesis of those hormones is impaired. It is most commonly caused by the chronic autoimmune inflammation of the thyroid, referred to as Hashimoto's disease. In this case, apart from the pharmacological treatment, diet does matter a great deal, too. It is extremely important to provide the body with all the essential nutrients. Exclusion of products that may interfere with the uptake of iodine - the trace element that is indispensable for the thyroid gland hormone synthesis, seems to be crucial, too. They most of all include cruciferous vegetables containing goitrogens (goitrogenic substances). This review aimed to collect and summarize the available scientific data on the safety of the cruciferous vegetable consumption within the context of its impact upon the thyroid function.


Subject(s)
Hashimoto Disease , Vegetables , Hashimoto Disease/metabolism , Humans , Diet , Thyroid Gland/metabolism , Brassicaceae
2.
BMC Plant Biol ; 24(1): 922, 2024 Oct 03.
Article in English | MEDLINE | ID: mdl-39358696

ABSTRACT

Hyperaccumulating plants are able to (hyper)accumulate high concentrations of metal(loid)s in their above-ground tissues without any signs of toxicity. Studies on the root-associated microbiome have been previously conducted in relation to hyperaccumulators, yet much remains unknown about the interactions between hyperaccumulating hosts and their microbiomes, as well as the dynamics within these microbial communities. Here, we assess the impact of the plant host on shaping microbial communities of three naturally occurring populations of Noccaea species in Slovenia: Noccaea praecox and co-occurring N. caerulescens from the non-metalliferous site and N. praecox from the metalliferous site. We investigated the effect of metal enrichment on microbial communities and explored the interactions within microbial groups and their environment. The abundance of bacterial phyla was more homogeneous than fungal classes across all three Noccaea populations and across the three root-associated compartments (roots, rhizosphere, and bulk soil). While most fungal and bacterial Operational Taxonomic Units (OTUs) were found at both sites, the metalliferous site comprised more unique OTUs in the root and rhizosphere compartments than the non-metalliferous site. In contrast to fungi, bacteria exhibited differentially significant abundance between the metalliferous and non-metalliferous sites as well as statistically significant correlations with most of the soil parameters. Results revealed N. caerulescens had the highest number of negative correlations between the bacterial phyla, whereas the population from the metalliferous site had the fewest. This decrease was accompanied by a big perturbation in the bacterial community at the metalliferous site, indicating increased selection between the bacterial taxa and the formation of potentially less stable rhizobiomes. These findings provide fundamentals for future research on the dynamics between hyperaccumulators and their associated microbiome.


Subject(s)
Bacteria , Microbiota , Bacteria/metabolism , Bacteria/genetics , Bacteria/classification , Slovenia , Soil Microbiology , Rhizosphere , Rhizome/microbiology , Rhizome/metabolism , Plant Roots/microbiology , Plant Roots/metabolism , Brassicaceae/microbiology , Brassicaceae/metabolism , Fungi/genetics , Fungi/metabolism
3.
Genes (Basel) ; 15(9)2024 Aug 23.
Article in English | MEDLINE | ID: mdl-39336706

ABSTRACT

Genetic similarity determines the extent to which two genotypes share common genetic material. It can be measured in various ways, such as by comparing DNA sequences, proteins, or other genetic markers. The significance of genetic similarity is multifaceted and encompasses various fields, including evolutionary biology, medicine, forensic science, animal and plant breeding, and anthropology. Genetic similarity is an important concept with wide application across different scientific disciplines. The research material included 21 rapeseed genotypes (ten interspecific Brassicaceae hybrids of F2 generation and 11 of their parental forms) and 146 alleles obtained using 21 ISSR molecular markers. In the presented study, six measures for calculating genetic similarity were compared: Euclidean, Jaccard, Kulczynski, Sokal and Michener, Nei, and Rogers. Genetic similarity values were estimated between all pairs of examined genotypes using the six measures proposed above. For each genetic similarity measure, the average, minimum, maximum values, and coefficient of variation were calculated. Correlation coefficients between the genetic similarity values obtained from each measure were determined. The obtained genetic similarity coefficients were used for the hierarchical clustering of objects using the unweighted pair group method with an arithmetic mean. A multiple regression model was written for each method, where the independent variables were the remaining methods. For each model, the coefficient of multiple determination was calculated. Genetic similarity values ranged from 0.486 to 0.993 (for the Euclidean method), from 0.157 to 0.986 (for the Jaccard method), from 0.275 to 0.993 (for the Kulczynski method), from 0.272 to 0.993 (for the Nei method), from 0.801 to 1.000 (for the Rogers method) and from 0.486 to 0.993 (for the Sokal and Michener method). The results indicate that the research material was divided into two identical groups using any of the proposed methods despite differences in the values of genetic similarity coefficients. Two of the presented measures of genetic similarity (the Sokal and Michener method and the Euclidean method) were the same.


Subject(s)
Brassicaceae , Hybridization, Genetic , Microsatellite Repeats , Microsatellite Repeats/genetics , Brassicaceae/genetics , Genotype , Genetic Markers , Alleles
4.
Planta ; 260(4): 84, 2024 Aug 31.
Article in English | MEDLINE | ID: mdl-39214933

ABSTRACT

MAIN CONCLUSION: The PcHsp70-5 enhances drought stress tolerance in transgenic Arabidopsis thaliana by upregulating stress tolerance genes and antioxidant enzyme activities. Heat shock proteins (HSPs) constitute a class of evolutionarily conserved proteins synthesized by organisms in response to various adverse environmental stimuli such as elevated temperatures, drought, hormonal fluctuations, high salt concentrations, and mechanical stress. However, research on HSPs has predominantly focused on model plants and crops, whereas their functions in desert plants have not been well investigated. This study analyzed the transcriptome of Pugionium cornutum and identified the complete ORFs of 25 genes of the PcHsp70 family genes. Their expression levels under drought stress were investigated using existing RNA-seq data. PcHsp70-5 genes exhibited high expression levels in both roots and leaves under drought stress. Consequently, the PcHsp70-5 genes were cloned and transformed into Arabidopsis thaliana for further analysis of their roles in drought stress response. Real-time fluorescence quantitative PCR (qRT-PCR) analysis demonstrated that both, drought stress and ABA, induced PcHsp70-5 expression. Under drought conditions, transgenic Arabidopsis plants exhibited markedly enhanced growth compared to wild-type plants, as evidenced by improved survival rates, root length, fresh weight, chlorophyll content, and reduced levels of malondialdehyde (MDA) and hydrogen peroxide (H2O2) in leaves, indicating that PcHsp70-5 overexpression mitigated growth inhibition and oxidative damage induced by drought stress. Subsequent research revealed that PcHsp70-5 overexpression significantly augmented the activities of superoxide dismutase (SOD), peroxidase (POD), catalase (CAT), and increased the proline content in transgenic Arabidopsis under drought conditions, alongside a significant increase in the expression levels of genes related to stress tolerance. This suggests that PcHsp70-5 enhances drought stress tolerance in transgenic Arabidopsis by upregulating stress tolerance genes and antioxidant enzyme activities.


Subject(s)
Brassicaceae , Gene Expression Regulation, Plant , HSP70 Heat-Shock Proteins , Stress, Physiological , Abscisic Acid/metabolism , Arabidopsis/genetics , Arabidopsis/physiology , Droughts , HSP70 Heat-Shock Proteins/genetics , HSP70 Heat-Shock Proteins/metabolism , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Leaves/physiology , Plant Proteins/genetics , Plant Proteins/metabolism , Plants, Genetically Modified/genetics , Transcriptome , Brassicaceae/genetics , Brassicaceae/physiology
5.
Curr Drug Discov Technol ; 21(4): 48-e011223224117, 2024.
Article in English | MEDLINE | ID: mdl-39206704

ABSTRACT

INTRODUCTION: Inflammation plays a crucial role in the body's defense mechanisms, but uncontrolled inflammation can lead to chronic and pathological conditions. This study aimed to identify natural compounds as potential replacements for the synthetic drug Zileuton, known for its side effects. METHOD: Utilizing the MOE and Molegro modeling methods, several molecules were evaluated, and three compounds, namely 1-Isothiocyanatopent-4-en-2-ol, 7-Isothiocyanatohept-1-ene, and 5- (Isothiocyanatomethyl)-1,2,3-trimethoxybenzene, exhibited superior inhibitory properties. These compounds consistently demonstrated low energy values, indicating high inhibition potency. Notably, 5-(Isothiocyanatomethyl)-1,2,3-trimethoxybenzene emerged as the most promising candidate among all tested compounds. RESULTS: These findings provide valuable insights for the development of alternative anti-inflammatory agents. Further research is required to assess the efficacy and safety profiles of these compounds in clinical settings. CONCLUSION: This study represents a significant advancement in the search for innovative therapeutic strategies to manage inflammation-related disorders.


Subject(s)
Lipoxygenase Inhibitors , Lipoxygenase Inhibitors/pharmacology , Lipoxygenase Inhibitors/therapeutic use , Lipoxygenase Inhibitors/chemistry , Humans , Brassicaceae/chemistry , Anti-Inflammatory Agents/pharmacology , Anti-Inflammatory Agents/chemistry , Anti-Inflammatory Agents/therapeutic use , Models, Molecular , Inflammation/drug therapy , Molecular Docking Simulation
6.
Sci Total Environ ; 950: 175238, 2024 Nov 10.
Article in English | MEDLINE | ID: mdl-39098423

ABSTRACT

Soil trace metal (TM) contamination is a worldwide issue and threatens food production and security. Remediation of cadmium (Cd) and zinc (Zn) contaminated soils by phytoextraction with the Zn/Cd hyperaccumulator Noccaea caerulescens is widely studied but few studies have investigated the efficiency of this technique to reduce Cd and Zn soil-to-crop transfers to subsequent vegetable crops. The vegetable biomonitor rocket Diplotaxis tenuifolia was grown in pots on 13 moderately contaminated soils that had previously been cropped with N. caerulescens. Using mixed-effects models, we show the drivers of rocket biomass, Cd and Zn concentrations. Our models show, for our study soils, the benefit of previous N. caerulescens uptake of Cd and Zn in decreasing Cd and Zn concentrations in a subsequent rocket crop. We also show a slight positive impact of N. caerulescens biomass (and therefore uptake) on rocket growth. Our data show that exchangeable soil concentrations are major drivers of Cd and Zn rocket concentrations. Other soil variables negatively driving rocket Cd and Zn concentrations are NO3- content, organic matter content, cation exchange capacity, and soil manganese which stimulate rocket biomass and/or influence TM bioavailability. Rocket D. tenuifolia seems to be a good biomonitor for contaminated soils as it is tolerant to relatively high TM soil concentrations. We demonstrate that 40 % of rockets grown on soils below 2 mg total Cd kg-1 dry soil have foliar Cd concentrations above the European maximum allowed level confirming the need to review soil legal thresholds to protect consumers' health. In conclusion, our study suggests promising use of N. caerulescens phytoextraction for bioavailable contaminant stripping which is all the more interesting given the increasing demand for urban growing spaces.


Subject(s)
Biodegradation, Environmental , Brassicaceae , Cadmium , Soil Pollutants , Zinc , Cadmium/metabolism , Cadmium/analysis , Soil Pollutants/analysis , Soil Pollutants/metabolism , Brassicaceae/metabolism , Crops, Agricultural , Soil/chemistry
7.
Sci Total Environ ; 950: 175178, 2024 Nov 10.
Article in English | MEDLINE | ID: mdl-39122049

ABSTRACT

Coastal ecotones can disrupt natural conditions, yielding intricate ecological contexts where salinity plays a variable role. The aim of this study was to assess the salinity effect on three species representatives of semifixed dune (Crucianella maritima, Helianthemum caput-felis and Teucrium dunense). Field data were collected to assess plant cover in semifixed dunes, ecotone with other coastal habitats, and artificial Posidonia oceanica wracks. Soil samples were collected, and conductivity measured. Then, experimental exposure to salinity was conducted with 6 seawater (SW) treatments (Control, 6.25 % SW, 12.5 % SW, 25 % SW, 50 % SW, 100 % SW). Flowering, gas exchange, chlorophyll fluorescence and enzymatic antioxidant measurements were conducted after two months of exposure. In the field trial, species presence varied depending on the habitat and was null on P. oceanica. The relation between conductivity and species abundance showed moderate tolerance for the three species. For C. maritima this relation was variable depending on the habitat. Experimental data suggest moderate tolerance with stress occurring at 25 % SW onwards. Gas exchange response to salinity was similar among species, but more drastic reduction in assimilation rate and larger decrease in water use efficiency was observed for C. maritima. Instead, photoinhibition occurred in H. caput-felis and T. dunense but was absent in C. maritima likely related to the fact that H. caput-felis and T. dunense activated catalase and superoxide dismutase enzymes, while C. maritima showed activation of glutathione-related enzymes. Malondialdehyde (MDA) increased in C. maritma and decreased for the other species indicating a more complex involvement of MDA under stress conditions. Flowering response to salinity was overall more resilient in T. dunense. Our results, based on field conductivity data and measurements of physiological, antioxidant, and reproductive traits, delineate specific tolerance differences and strategies towards salinity for Mediterranean semifixed dune species.


Subject(s)
Salinity , Salt Stress , Ecosystem , Seawater/chemistry , Alismatales/physiology , Salt Tolerance/physiology , Brassicaceae/physiology
8.
Food Res Int ; 193: 114812, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39160037

ABSTRACT

Microgreens, also called superfoods, emerge because of their high levels of nutrients, diverse flavour profiles, and sustainable cultivation methods, which make them culinary delights and valuable to a healthy and flavorful diet. The present study investigated Brassicaceae family microgreens, proposing a novel system (quality indices) that allows scoring among them. Fourteen Brassica microgreen species were morphological, phytochemical, and sensorial investigated. The morphological assessment revealed that radish microgreens exhibited the highest leaf area (p < 0.05), while red mizuna demonstrated superior yield. Cauliflower microgreens contained the highest concentrations of ascorbic acid (HPLC-DAD) and total phenolic content (p < 0.05). Phytochemical analysis using HPLC-MS/MS identified over 18 glucosinolates and phenolic compounds. Red mustard and red cabbage showed the highest glucosinolate content (p < 0.05). Watercress exhibited the highest phenolic compound content (p < 0.05), primarily flavonoids, while broccoli and radish contained the highest isothiocyanate levels. Cauliflower microgreens resulted in the most consumer-accepted variety. Appling quality indices scoring system identified radish, cauliflower, and broccoli microgreens as the most promising species. This study underscores the potential of Brassica microgreens as an excellent source of health-promoting phytochemicals with favorable market acceptance, providing valuable insights for both nutritional research and commercial applications.


Subject(s)
Brassicaceae , Glucosinolates , Phenols , Phytochemicals , Taste , Phytochemicals/analysis , Glucosinolates/analysis , Phenols/analysis , Brassicaceae/chemistry , Chromatography, High Pressure Liquid , Tandem Mass Spectrometry , Humans , Ascorbic Acid/analysis , Flavonoids/analysis , Brassica/chemistry , Plant Leaves/chemistry , Isothiocyanates/analysis , Raphanus/chemistry
9.
Gigascience ; 132024 Jan 02.
Article in English | MEDLINE | ID: mdl-39110621

ABSTRACT

BACKGROUND: The economic importance of the globally distributed Brassicaceae family resides in the large diversity of crops within the family and the substantial variety of agronomic and functional traits they possess. We reviewed the current classifications of crop wild relatives (CWRs) in the Brassicaceae family with the aim of identifying new potential cross-compatible species from a total of 1,242 species using phylogenetic approaches. RESULTS: In general, cross-compatibility data between wild species and crops, as well as phenotype and genotype characterisation data, were available for major crops but very limited for minor crops, restricting the identification of new potential CWRs. Around 70% of wild Brassicaceae did not have genetic sequence data available in public repositories, and only 40% had chromosome counts published. Using phylogenetic distances, we propose 103 new potential CWRs for this family, which we recommend as priorities for cross-compatibility tests with crops and for phenotypic characterisation, including 71 newly identified CWRs for 10 minor crops. From the total species used in this study, more than half had no records of being in ex situ conservation, and 80% were not assessed for their conservation status or were data deficient (IUCN Red List Assessments). CONCLUSIONS: Great efforts are needed on ex situ conservation to have accessible material for characterising and evaluating the species for future breeding programmes. We identified the Mediterranean region as one key conservation area for wild Brassicaceae species, with great numbers of endemic and threatened species. Conservation assessments are urgently needed to evaluate most of these wild Brassicaceae.


Subject(s)
Brassicaceae , Conservation of Natural Resources , Crops, Agricultural , Phylogeny , Brassicaceae/genetics , Brassicaceae/classification , Crops, Agricultural/genetics , Phenotype , Genotype
10.
Cell Mol Biol (Noisy-le-grand) ; 70(7): 243-251, 2024 Jul 28.
Article in English | MEDLINE | ID: mdl-39097867

ABSTRACT

Oil seeds now make up the world's second-largest food source after cereals. In recent years, the medicinal- oil plant Camelina sativa has attracted much attention for its high levels of unsaturated fatty acids and low levels of saturated fatty acids as well as its resistance to abiotic stresses. Improvement of oil quality is considered an important trait in this plant. Erucic acid is one of the fatty acids affecting the quality of camelina oil. Altering the fatty acid composition in camelina oil through genetic manipulation requires the identification, isolation, and cloning of genes involved in fatty acid biosynthesis. The Fatty Acid Elongase 1 (FAE1) gene encodes the enzyme ß-ketoacyl CoA synthase (KCS), a crucial enzyme in the biosynthesis of erucic acid. In this study, the isolation and cloning of the FAE1 gene from Camelina sativa were conducted to construct an antisense structure. The molecular homology modeling of DFAE1 proteins using the SWISS-MODEL server on ExPASy led to the generation of the 3D structures of FAE1 and DFAE1 proteins. The GMQE values of 0.44 for FAE1 and 0.08 for DFAE1 suggest high accuracy in the structural estimation of these genes. The fragments were isolated from the DNA source of the genomic Soheil cultivar with an erucic acid content of about 3% (in matured seeds) using PCR. After cloning the FAE1 gene into the Bluescript II SK+ vector and sequencing, the resulting fragments were utilized to construct the antisense structure in the pBI121 plant expression vector. The approved antisense structure was introduced into the Camelina plant using the Agrobacterium-mediated method, with optimization of tissue culture and gene transfer conditions. This approach holds potential to advance our knowledge of fat biosynthesis, leading to potential improvements in oil quality in Camelina sativa.


Subject(s)
Brassicaceae , Cloning, Molecular , Erucic Acids , Fatty Acid Elongases , Brassicaceae/genetics , Brassicaceae/metabolism , Cloning, Molecular/methods , Erucic Acids/metabolism , Fatty Acid Elongases/genetics , Fatty Acid Elongases/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Plants, Genetically Modified/genetics , Amino Acid Sequence , Seeds/genetics , Seeds/metabolism , Models, Molecular , Gene Expression Regulation, Plant , Acetyltransferases/genetics , Acetyltransferases/metabolism , Genes, Plant
11.
Physiol Plant ; 176(4): e14506, 2024.
Article in English | MEDLINE | ID: mdl-39191701

ABSTRACT

Late embryogenesis abundant (LEA) proteins have been widely recognized for their role in various abiotic stress responses in higher plants. Nevertheless, the specific mechanism responsible for the function of LEA proteins in plants has not yet been explored. This research involved the isolation and characterization of HcLEA113 from kenaf, revealing a significant increase in its expression in response to drought stress. When HcLEA113 was introduced into yeast, it resulted in an improved survival rate under drought conditions. Furthermore, the overexpression of HcLEA113 in tobacco plants led to enhanced tolerance to drought stress. Specifically, HcLEA113-OE plants exhibited higher germination rates, longer root lengths, greater chlorophyll content, and higher relative water content under drought stress compared to wild-type (WT) plants, while their relative conductivity was significantly lower than that of WT plants. Further physiological measurements revealed that the proline content, soluble sugars, and antioxidant activities of WT and HcLEA113-OE tobacco leaves increased significantly under drought stress, with greater changes in HcLEA113-OE plants than WT. The increase in hydrogen peroxide (H2O2), superoxide anions (O2 -), and malondialdehyde (MDA) content was significantly lower in HcLEA113-OE lines than in WT plants. Additionally, HcLEA113-OE plants can activate reactive oxygen species (ROS)- and osmotic-related genes in response to drought stress. On the other hand, silencing the HcLEA113 gene through virus-induced gene silencing (VIGS) in kenaf plants led to notable growth suppression when exposed to drought conditions, manifesting as decreased plant height and dry weight. Meanwhile, antioxidant enzymes' activity significantly decreased and the ROS content increased. This study offers valuable insights for future research on the genetic engineering of drought resistance in plants.


Subject(s)
Droughts , Gene Expression Regulation, Plant , Nicotiana , Plant Proteins , Stress, Physiological , Plant Proteins/genetics , Plant Proteins/metabolism , Nicotiana/genetics , Nicotiana/physiology , Stress, Physiological/genetics , Reactive Oxygen Species/metabolism , Brassicaceae/genetics , Brassicaceae/physiology , Brassicaceae/metabolism , Plants, Genetically Modified/genetics , Hydrogen Peroxide/metabolism , Malondialdehyde/metabolism , Germination/genetics
12.
Int J Mol Sci ; 25(16)2024 Aug 20.
Article in English | MEDLINE | ID: mdl-39201724

ABSTRACT

The Brassicaceae genus consists of many economically important mustards of value for food and medicinal purposes, namely Asian mustard (Brassica juncea), ball mustard (Neslia paniculata), black mustard (B. nigra), garlic mustard (Alliaria petiolata), hedge mustard (Sisymbrium officinale), Asian hedge mustard (S. orientale), oilseed rape (B. napus), rapeseed (B. rapa), treacle mustard (Erysimum repandum), smooth mustard (S. erysimoides), white ball mustard (Calepina irregularis), white mustard (Sinapis alba), and Canola. Some of these are commercially cultivated as oilseeds to meet the global demand for a healthy plant-derived oil, high in polyunsaturated fats, i.e., B. napus and B. juncea. Other species are foraged from the wild where they grow on roadsides and as a weed of arable land, i.e., E. repandum and S. erysimoides, and harvested for medicinal uses. These plants contain a diverse range of bioactive natural products including sulfur-containing glucosinolates and other potentially valuable compounds, namely omega-3-fatty acids, terpenoids, phenylpropanoids, flavonoids, tannins, S-methyl cysteine sulfoxide, and trace-elements. Various parts of these plants and many of the molecules that are produced throughout the plant have been used in traditional medicines and more recently in the mainstream pharmaceutical and food industries. This study relates the uses of mustards in traditional medicines with their bioactive molecules and possible mechanisms of action and provides an overview of the current knowledge of Brassicaceae oilseeds and mustards, their phytochemicals, and their biological activities.


Subject(s)
Phytochemicals , Humans , Phytochemicals/pharmacology , Phytochemicals/chemistry , Plant Extracts/pharmacology , Plant Extracts/chemistry , Brassicaceae/chemistry , Mustard Plant/chemistry
13.
Molecules ; 29(16)2024 Aug 10.
Article in English | MEDLINE | ID: mdl-39202882

ABSTRACT

Lunaria annua L. (Brassicaceae) is an ornamental plant newly identified in Europe as a promising industrial oilseed crop for its valuable very-long-chain monounsaturated fatty acids (MUFAs), especially erucic acid (EA) and nervonic acid (NA). L. annua seeds were obtained from annual winter-type plants selected and cultivated in Northern France. Using a systematic multiple-method approach, we set out to determine the profile and content of glucosinolates (GSLs), which are the relevant chemical tag of Brassicaceae. Intact GSLs were analyzed through a well-established LC-MS method. Identification and quantification were performed by HPLC-PDA of desulfo-GSLs (dGLs) according to the official EU ISO method. Moreover, GSL structures were confirmed by GC-MS analysis of the related isothiocyanates (ITCs). Seven GSLs were identified, directly or indirectly, as follows: 1-methylethyl GSL, (1S)-1-methylpropyl GSL, (Rs)-5-(methylsulfinyl)pentyl GSL, (Rs)-6-(methylsulfinyl)hexyl GSL, (2S)-2-hydroxy-4-pentenyl GSL, 2-phenylethyl GSL, and 1-methoxyindol-3-ylmethyl GSL. In other respects, the FA composition of the seed oil was determined. Results revealed cultivated L. annua seed to be a source of NA-rich oil, and presscake as a valuable coproduct. This presscake is indeed rich in GSLs (4.3% w/w), precursors of promising bioactive molecules for agricultural and nutraceutical applications.


Subject(s)
Brassicaceae , Fatty Acids , Gas Chromatography-Mass Spectrometry , Glucosinolates , Seeds , Glucosinolates/analysis , Glucosinolates/chemistry , Seeds/chemistry , Fatty Acids/analysis , Fatty Acids/chemistry , Gas Chromatography-Mass Spectrometry/methods , Chromatography, High Pressure Liquid/methods , Brassicaceae/chemistry , Mass Spectrometry/methods , Liquid Chromatography-Mass Spectrometry
14.
Cell ; 187(14): 3504-3505, 2024 Jul 11.
Article in English | MEDLINE | ID: mdl-38996485

ABSTRACT

Organisms experience a constantly changing environment and must adjust their development to maximize fitness. These "life histories" are fantastically diverse and have fascinated biologists for decades. Recent work published in Cell reveals the complex genetic mechanisms that drive life-history variation within and among species in the Brassicaceae plant family.


Subject(s)
Reproduction , Brassicaceae/physiology , Brassicaceae/genetics , Environment
15.
Mol Genet Genomics ; 299(1): 73, 2024 Jul 27.
Article in English | MEDLINE | ID: mdl-39066857

ABSTRACT

Exploring the intricate relationships between plants and their resident microorganisms is crucial not only for developing new methods to improve disease resistance and crop yields but also for understanding their co-evolutionary dynamics. Our research delves into the role of the phyllosphere-associated microbiome, especially Actinomycetota species, in enhancing pathogen resistance in Theobroma grandiflorum, or cupuassu, an agriculturally valuable Amazonian fruit tree vulnerable to witches' broom disease caused by Moniliophthora perniciosa. While breeding resistant cupuassu genotypes is a possible solution, the capacity of the Actinomycetota phylum to produce beneficial metabolites offers an alternative approach yet to be explored in this context. Utilizing advanced long-read sequencing and metagenomic analysis, we examined Actinomycetota from the phyllosphere of a disease-resistant cupuassu genotype, identifying 11 Metagenome-Assembled Genomes across eight genera. Our comparative genomic analysis uncovered 54 Biosynthetic Gene Clusters related to antitumor, antimicrobial, and plant growth-promoting activities, alongside cutinases and type VII secretion system-associated genes. These results indicate the potential of phyllosphere-associated Actinomycetota in cupuassu for inducing resistance or antagonism against pathogens. By integrating our genomic discoveries with the existing knowledge of cupuassu's defense mechanisms, we developed a model hypothesizing the synergistic or antagonistic interactions between plant and identified Actinomycetota during plant-pathogen interactions. This model offers a framework for understanding the intricate dynamics of microbial influence on plant health. In conclusion, this study underscores the significance of the phyllosphere microbiome, particularly Actinomycetota, in the broader context of harnessing microbial interactions for plant health. These findings offer valuable insights for enhancing agricultural productivity and sustainability.


Subject(s)
Plant Diseases , Plant Leaves , Plant Leaves/microbiology , Plant Leaves/genetics , Plant Diseases/microbiology , Plant Diseases/genetics , Disease Resistance/genetics , Microbiota/genetics , Ecosystem , Actinobacteria/genetics , Actinobacteria/isolation & purification , Metagenomics/methods , Metagenome/genetics , Phylogeny , Brassicaceae/microbiology , Brassicaceae/genetics
16.
Genes (Basel) ; 15(7)2024 Jul 20.
Article in English | MEDLINE | ID: mdl-39062734

ABSTRACT

Closely-related plant groups with distinct microbiomes, chemistries and ecological characteristics represent tractable models to explore mechanisms shaping species spread, competitive dynamics and community assembly at the interface of native and introduced ranges. We investigated phyllosphere microbial communities, volatile organic compound (VOC) compositions, and potential interactions among introduced S. trilobata, native S. calendulacea and their hybrid in South China. S. trilobata exhibited higher α diversity but significantly different community composition compared to the native and hybrid groups. However, S. calendulacea and the hybrid shared certain microbial taxa, suggesting potential gene flow or co-existence. The potent antimicrobial VOC profile of S. trilobata, including unique compounds like p-cymene (13.33%), likely contributes to its invasion success. The hybrid's intermediate microbial and VOC profiles suggest possible consequences for species distribution, genetic exchange, and community assembly in heterogeneous environments. This hybrid deserves further study as both an opportunity for and threat to diversity maintenance. These differentiating yet connected plant groups provide insight into ecological and evolutionary dynamics shaping microbiome structure, species co-occurrence and competitive outcomes during biological exchange and habitat transformation. An interdisciplinary approach combining chemical and microbial ecology may reveal mechanisms underlying community stability and change, informing management of species spread in a globalized world.


Subject(s)
Introduced Species , Microbiota , Volatile Organic Compounds , Volatile Organic Compounds/metabolism , Brassicaceae/microbiology , Brassicaceae/genetics , China
17.
Sci Rep ; 14(1): 15976, 2024 07 10.
Article in English | MEDLINE | ID: mdl-38987575

ABSTRACT

High-altitude (HA) environment presents immense physiological adversities for humans that have been overcome by supplementing bio-active phytochemicals from functional foods that support and accelerate acclimatization under these extreme environmental conditions. Several agricultural interventions have been investigated to enhance the phytochemical content in vegetables however; these studies have been limited to low-altitude (LA) regions only. In view of an existing knowledge gap, current work is designed to compare the phytochemical compositions of HA and LA-grown Brassicaceae vegetables (cabbage, cauliflower, knol-khol, and radish) using organic treatments via farm yard manure (FYM) and Azotobacter. The open field study was conducted as a two-factorial randomized block design. The first factor was treatment (T1-FYM, T2-Azotobacter, T3-FYM + Azotobacter, and T4-control) while the second was locations (HA and LA). Among all these treatments, the application of treatment T3 in HA-grown cabbage showed the highest total phenolic content (TPC; 9.56 µg/mg), total flavonoids content (TFC; 14.48 µg/mg), and antioxidant potential using 2,2-diphenyl-1-picrylhydrazyl (DPPH; 85.97%) and ferric reducing antioxidant power (FRAP; 30.77 µg/mg) compared to LA grown samples. Reverse Phase high performance liquid chromatography (RP-HPLC) analysis showed that treatment T3 at HA led to significantly high kaempferol (0.92 µg/mg) and sulforaphane (8.94 µg/mg) contents in cabbage whereas, indole-3-carbinol (1.31 µg/mg) was higher in HA grown cauliflower. The present study provides scientific evidence for the enrichment of health-promoting phytochemical compounds in Brassicaceae vegetables grown with T3 treatment specifically at HA.


Subject(s)
Altitude , Brassicaceae , Phytochemicals , Vegetables , Brassicaceae/chemistry , Vegetables/chemistry , Phytochemicals/analysis , Antioxidants/analysis , Phenols/analysis , Cold Temperature , Humans
18.
New Phytol ; 244(1): 249-264, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39081013

ABSTRACT

Diversification of plant chemical phenotypes is typically associated with spatially and temporally variable plant-insect interactions. Floral scent is often assumed to be the target of pollinator-mediated selection, whereas foliar compounds are considered targets of antagonist-mediated selection. However, floral and vegetative phytochemicals can be biosynthetically linked and may thus evolve as integrated phenotypes. Utilizing a common garden of 28 populations of the perennial herb Arabis alpina (Brassicaceae), we investigated integration within and among floral scent compounds and foliar defense compounds (both volatile compounds and tissue-bound glucosinolates). Within floral scent volatiles, foliar volatile compounds, and glucosinolates, phytochemicals were often positively correlated, and correlations were stronger within these groups than between them. Thus, we found no evidence of integration between compound groups indicating that these are free to evolve independently. Relative to self-compatible populations, self-incompatible populations experienced stronger correlations between floral scent compounds, and a trend toward lower integration between floral scent and foliar volatiles. Our study serves as a rare test of integration of multiple, physiologically related plant traits that each are potential targets of insect-mediated selection. Our results suggest that independent evolutionary forces are likely to diversify different axes of plant chemistry without major constraints.


Subject(s)
Brassicaceae , Flowers , Phytochemicals , Plant Leaves , Volatile Organic Compounds , Flowers/physiology , Volatile Organic Compounds/metabolism , Volatile Organic Compounds/analysis , Phytochemicals/analysis , Brassicaceae/physiology , Plant Leaves/physiology , Plant Leaves/chemistry , Odorants/analysis , Glucosinolates/metabolism , Phenotype
19.
Int J Mol Sci ; 25(13)2024 Jun 25.
Article in English | MEDLINE | ID: mdl-39000052

ABSTRACT

Triacylglycerols (TAGs) are the storage oils of plant seeds, and these lipids provide energy for seed germination and valuable oils for human consumption. Three diacylglycerol acyltransferases (DGAT1, DGAT2, and DGAT3) and phospholipid:diacylglycerol acyltransferases participate in the biosynthesis of TAGs. DGAT1 and DGAT2 participate in the biosynthesis of TAGs through the endoplasmic reticulum (ER) pathway. In this study, we functionally characterized CsDGAT1 and CsDGAT2 from camelina (Camelina sativa). Green fluorescent protein-fused CsDGAT1 and CsDGAT2 localized to the ER when transiently expressed in Nicotiana benthamiana leaves. To generate Csdgat1 and Csdgat2 mutants using the CRISPR/Cas9 system, camelina was transformed with a binary vector carrying Cas9 and the respective guide RNAs targeting CsDGAT1s and CsDGAT2s via the Agrobacterium-mediated floral dip method. The EDD1 lines had missense and nonsense mutations in the CsDGAT1 homoeologs, suggesting that they retained some CsDGAT1 function, and their seeds showed decreased eicosaenoic acid (C20:1) contents and increased C18:3 contents compared to the wild type (WT). The EDD2 lines had a complete knockout of all CsDGAT2 homoeologs and a slightly decreased C18:3 content compared to the WT. In conclusion, CsDGAT1 and CsDGAT2 have a small influence on the seed oil content and have an acyl preference for C20:1 and C18:3, respectively. This finding can be applied to develop oilseed plants containing high omega-3 fatty acids or high oleic acid.


Subject(s)
Brassicaceae , Diacylglycerol O-Acyltransferase , Fatty Acids , Plant Proteins , Seeds , Fatty Acids/metabolism , Plant Proteins/metabolism , Plant Proteins/genetics , Diacylglycerol O-Acyltransferase/metabolism , Diacylglycerol O-Acyltransferase/genetics , Seeds/metabolism , Seeds/genetics , Brassicaceae/genetics , Brassicaceae/metabolism , CRISPR-Cas Systems , Triglycerides/metabolism , Gene Expression Regulation, Plant , Plants, Genetically Modified/genetics , Mutation , Gene Editing
20.
Mol Biol Evol ; 41(8)2024 Aug 02.
Article in English | MEDLINE | ID: mdl-39073781

ABSTRACT

The molecular underpinnings and consequences of cycles of whole-genome duplication (WGD) and subsequent gene loss through subgenome fractionation remain largely elusive. Endogenous drivers, such as transposable elements (TEs), have been postulated to shape genome-wide dominance and biased fractionation, leading to a conserved least-fractionated (LF) subgenome and a degenerated most-fractionated (MF) subgenome. In contrast, the role of exogenous factors, such as those induced by environmental stresses, has been overlooked. In this study, a chromosome-scale assembly of the alpine buckler mustard (Biscutella laevigata; Brassicaceae) that underwent a WGD event about 11 million years ago is coupled with transcriptional responses to heat, cold, drought, and herbivory to assess how gene expression is associated with differential gene retention across the MF and LF subgenomes. Counteracting the impact of TEs in reducing the expression and retention of nearby genes across the MF subgenome, dosage balance is highlighted as a main endogenous promoter of the retention of duplicated gene products under purifying selection. Consistent with the "turn a hobby into a job" model, about one-third of environment-responsive duplicates exhibit novel expression patterns, with one copy typically remaining conditionally expressed, whereas the other copy has evolved constitutive expression, highlighting exogenous factors as a major driver of gene retention. Showing uneven patterns of fractionation, with regions remaining unbiased, but with others showing high bias and significant enrichment in environment-responsive genes, this mesopolyploid genome presents evolutionary signatures consistent with an interplay of endogenous and exogenous factors having driven gene content following WGD-fractionation cycles.


Subject(s)
Genome, Plant , Gene Duplication , Evolution, Molecular , DNA Transposable Elements , Stress, Physiological , Brassicaceae/genetics , Gene Expression Regulation, Plant
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