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1.
Chem Biol Drug Des ; 104(1): e14581, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38997237

ABSTRACT

N-heterocyclic compounds are important molecular scaffolds in the search for new drugs, since most drugs contain heterocyclic moieties in their molecular structure, and some of these classes of heterocycles are able to provide ligands for two or more biological targets. Ketene dithioacetals are important building blocks in organic synthesis and are widely used in the synthesis of N-heterocyclic compounds. In this work, we used double vinylic substitution reactions on ketene dithioacetals to synthesize a small library of heterocyclic derivatives and evaluated their cytotoxic activity in breast and ovarian cancer cells, identifying two benzoxazoles with good potency and selectivity. In silico predictions indicate that the two most active derivatives exhibit physicochemical properties within the range of drug-like compounds and showed potential to interact with HDAC8 and ERK1 cancer-related targets.


Subject(s)
Antineoplastic Agents , Ethylenes , Heterocyclic Compounds , Ketones , Humans , Cell Line, Tumor , Ethylenes/chemistry , Ethylenes/pharmacology , Heterocyclic Compounds/chemistry , Heterocyclic Compounds/pharmacology , Heterocyclic Compounds/chemical synthesis , Antineoplastic Agents/pharmacology , Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/chemistry , Ketones/chemistry , Ketones/pharmacology , Ketones/chemical synthesis , Structure-Activity Relationship , Histone Deacetylases/metabolism , Molecular Docking Simulation , Drug Screening Assays, Antitumor , Acetals/chemistry , Acetals/pharmacology , Acetals/chemical synthesis , Repressor Proteins
2.
Rapid Commun Mass Spectrom ; 38(19): e9869, 2024 Oct 15.
Article in English | MEDLINE | ID: mdl-39049449

ABSTRACT

RATIONALE: Ethylene oxide (EO) sterilization is commonly employed for the sterilization of medical devices and has a very high market share. However, EO and its metabolite ethylene chlorohydrin (ECH) are toxic to humans. In compliance with the classification and residue limits of medical devices defined by ISO 10993-7, our study established two extraction methods for the testing of EO and ECH. METHODS: The first method involves simulated-use extraction using water as the extraction solvent. While the second, exhaustive extraction, directly extracts sample through headspace sampling analysis. Gas chromatography-tandem mass spectrometry in multiple reaction monitoring mode was utilized, requiring only 16 min. Then, the developed method was applied to assess 10 commercially available medical devices sterilized by EO. RESULTS: In simulated-use extraction, calibration curves were evaluated in the range of 1-100 and 5-500 µg for EO and ECH, respectively (r > 0.999). Inter-day recoveries ranged from 85.0% to 95.2% and from 94.8% to 102.4%. In exhaustive extraction, calibration curves spanned 0.5-50 and 2-200 µg for EO and ECH, respectively (r > 0.999). Inter-day recoveries ranged from 101.6% to 102.1% for EO and from 98.1% to 102.2% for ECH. After analysis of the 10 commercially available medical devices, two cotton swabs were found to have ECH of 35.1 and 28.4 µg per device, and four medical devices were found to have EO with concentration below the limit of quantification. Meanwhile, we found that the EO internal standard (propylene oxide) recommended by ISO 10993-7 had interference problems with other similar substances and was not suitable as an internal standard for EO. CONCLUSIONS: This study offers a sensitive and straightforward analytical approach to EO and ECH residues in a variety of medical devices. In addition, the results show that the EO or ECH content of these types of medical devices in our study falls below the regulatory limits, therefore instilling confidence among consumers regarding their safe use.


Subject(s)
Ethylene Oxide , Gas Chromatography-Mass Spectrometry , Tandem Mass Spectrometry , Ethylene Oxide/analysis , Ethylene Oxide/chemistry , Tandem Mass Spectrometry/methods , Gas Chromatography-Mass Spectrometry/methods , Equipment and Supplies , Limit of Detection , Ethylenes/analysis , Ethylenes/chemistry , Reproducibility of Results , Equipment Contamination , Sterilization/methods
3.
Int J Mol Sci ; 25(13)2024 Jun 22.
Article in English | MEDLINE | ID: mdl-38999970

ABSTRACT

Taraxacum kok-saghyz (TKS) is a model plant and a potential rubber-producing crop for the study of natural rubber (NR) biosynthesis. The precise analysis of the NR biosynthesis mechanism is an important theoretical basis for improving rubber yield. The small rubber particle protein (SRPP) and rubber elongation factor (REF) are located in the membrane of rubber particles and play crucial roles in rubber biosynthesis. However, the specific functions of the SRPP/REF gene family in the rubber biosynthesis mechanism have not been fully resolved. In this study, we performed a genome-wide identification of the 10 TkSRPP and 2 TkREF genes' family members of Russian dandelion and a comprehensive investigation on the evolution of the ethylene/methyl jasmonate-induced expression of the SRPP/REF gene family in TKS. Based on phylogenetic analysis, 12 TkSRPP/REFs proteins were divided into five subclades. Our study revealed one functional domain and 10 motifs in these proteins. The SRPP/REF protein sequences all contain typical REF structural domains and belong to the same superfamily. Members of this family are most closely related to the orthologous species T. mongolicum and share the same distribution pattern of SRPP/REF genes in T. mongolicum and L. sativa, both of which belong to the family Asteraceae. Collinearity analysis showed that segmental duplication events played a key role in the expansion of the TkSRPP/REFs gene family. The expression levels of most TkSRPP/REF members were significantly increased in different tissues of T. kok-saghyz after induction with ethylene and methyl jasmonate. These results will provide a theoretical basis for the selection of candidate genes for the molecular breeding of T. kok-saghyz and the precise resolution of the mechanism of natural rubber production.


Subject(s)
Acetates , Cyclopentanes , Ethylenes , Gene Expression Regulation, Plant , Multigene Family , Oxylipins , Phylogeny , Plant Proteins , Taraxacum , Oxylipins/pharmacology , Cyclopentanes/pharmacology , Taraxacum/genetics , Taraxacum/metabolism , Taraxacum/drug effects , Ethylenes/pharmacology , Gene Expression Regulation, Plant/drug effects , Plant Proteins/genetics , Plant Proteins/metabolism , Acetates/pharmacology , Genome, Plant , Genome-Wide Association Study
4.
Nat Commun ; 15(1): 5987, 2024 Jul 16.
Article in English | MEDLINE | ID: mdl-39013913

ABSTRACT

Ethylene regulates plant growth, development, and stress adaptation. However, the early signaling events following ethylene perception, particularly in the regulation of ethylene receptor/CTRs (CONSTITUTIVE TRIPLE RESPONSE) complex, remains less understood. Here, utilizing the rapid phospho-shift of rice OsCTR2 in response to ethylene as a sensitive readout for signal activation, we revealed that MHZ3, previously identified as a stabilizer of ETHYLENE INSENSITIVE 2 (OsEIN2), is crucial for maintaining OsCTR2 phosphorylation. Genetically, both functional MHZ3 and ethylene receptors prove essential for OsCTR2 phosphorylation. MHZ3 physically interacts with both subfamily I and II ethylene receptors, e.g., OsERS2 and OsETR2 respectively, stabilizing their association with OsCTR2 and thereby maintaining OsCTR2 activity. Ethylene treatment disrupts the interactions within the protein complex MHZ3/receptors/OsCTR2, reducing OsCTR2 phosphorylation and initiating downstream signaling. Our study unveils the dual role of MHZ3 in fine-tuning ethylene signaling activation, providing insights into the initial stages of the ethylene signaling cascade.


Subject(s)
Ethylenes , Gene Expression Regulation, Plant , Oryza , Plant Proteins , Receptors, Cell Surface , Signal Transduction , Oryza/metabolism , Oryza/genetics , Ethylenes/metabolism , Plant Proteins/metabolism , Plant Proteins/genetics , Phosphorylation , Receptors, Cell Surface/metabolism , Receptors, Cell Surface/genetics , Plants, Genetically Modified , Membrane Proteins/metabolism , Membrane Proteins/genetics
5.
Planta ; 260(2): 50, 2024 Jul 11.
Article in English | MEDLINE | ID: mdl-38990341

ABSTRACT

MAIN CONCLUSION: BcERF98 is induced by ethylene signaling and inhibits the expression of BcFT by interacting with BcNF-YA2 and BcEIP9, thereby inhibiting plant flowering. Several stresses trigger the accumulation of ethylene, which then transmits the signal to ethylene response factors (ERFs) to participate in the regulation of plant development to adapt to the environment. This study clarifies the function of BcERF98, a homolog of AtERF98, in the regulation of plant flowering time mediated by high concentrations of ethylene. Results indicate that BcERF98 is a nuclear and the cell membrane-localized transcription factor and highly responsive to ethylene signaling. BcERF98 inhibits the expression of BcFT by interacting with BcEIP9 and BcNF-YA2, which are related to flowering time regulation, thereby participating in ethylene-mediated plant late flowering regulation. The results have enriched the theoretical knowledge of flowering regulation in non-heading Chinese cabbage (NHCC), providing the scientific basis and gene reserves for cultivating new varieties of NHCC with different flowering times.


Subject(s)
Ethylenes , Flowers , Gene Expression Regulation, Plant , Plant Proteins , Transcription Factors , Flowers/genetics , Flowers/physiology , Flowers/growth & development , Ethylenes/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Transcription Factors/metabolism , Transcription Factors/genetics , Brassica/genetics , Brassica/physiology , Brassica/metabolism , Brassica/growth & development , Signal Transduction , Plant Growth Regulators/metabolism
6.
Planta ; 260(2): 54, 2024 Jul 16.
Article in English | MEDLINE | ID: mdl-39012577

ABSTRACT

MAIN CONCLUSION: phytoglobin1 positively regulates root bending in hypoxic Arabidopsis roots through regulation of ethylene response factors and auxin transport. Hypoxia-induced root bending is known to be mediated by the redundant activity of the group VII ethylene response factors (ERFVII) RAP2.12 and HRE2, causing changes in polar auxin transport (PAT). Here, we show that phytoglobin1 (Pgb1), implicated in hypoxic adaptation through scavenging of nitric oxide (NO), can alter root direction under low oxygen. Hypoxia-induced bending is exaggerated in roots over-expressing Pgb1 and attenuated in those where the gene is suppressed. These effects were attributed to Pgb1 repressing both RAP2.12 and HRE2. Expression, immunological and genetic data place Pgb1 upstream of RAP2.12 and HRE2 in the regulation of root bending in oxygen-limiting environments. The attenuation of slanting in Pgb1-suppressing roots was associated with depletion of auxin activity at the root tip because of depression in PAT, while exaggeration of root bending in Pgb1-over-expressing roots with the retention of auxin activity. Changes in PIN2 distribution patterns, suggestive of redirection of auxin movement during hypoxia, might contribute to the differential root bending responses of the transgenic lines. In the end, Pgb1, by regulating NO levels, controls the expression of 2 ERFVIIs which, in a cascade, modulate PAT and, therefore, root bending.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Indoleacetic Acids , Oxygen , Plant Roots , Signal Transduction , Indoleacetic Acids/metabolism , Plant Roots/metabolism , Plant Roots/genetics , Plant Roots/physiology , Arabidopsis/genetics , Arabidopsis/physiology , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/genetics , Oxygen/metabolism , Gene Expression Regulation, Plant , Ethylenes/metabolism , Nitric Oxide/metabolism , Transcription Factors/metabolism , Transcription Factors/genetics , Biological Transport , DNA-Binding Proteins
7.
Physiol Plant ; 176(4): e14411, 2024.
Article in English | MEDLINE | ID: mdl-38973028

ABSTRACT

Plant growth-promoting rhizobacteria (PGPR) are known for their role in ameliorating plant stress, including alkaline stress, yet the mechanisms involved are not fully understood. This study investigates the impact of various inoculum doses of Bacillus licheniformis Jrh14-10 on Arabidopsis growth under alkaline stress and explores the underlying mechanisms of tolerance enhancement. We found that all tested doses improved the growth of NaHCO3-treated seedlings, with 109 cfu/mL being the most effective. Transcriptome analysis indicated downregulation of ethylene-related genes and an upregulation of polyamine biosynthesis genes following Jrh14-10 treatment under alkaline conditions. Further qRT-PCR analysis confirmed the suppression of ethylene biosynthesis and signaling genes, alongside the activation of polyamine biosynthesis genes in NaHCO3-stressed seedlings treated with Jrh14-10. Genetic analysis showed that ethylene signaling-deficient mutants (etr1-3 and ein3-1) exhibited greater tolerance to NaHCO3 than the wild type, and the growth-promoting effect of Jrh14-10 was significantly diminished in these mutants. Additionally, Jrh14-10 was found unable to produce 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase, indicating it does not reduce the ethylene precursor ACC in Arabidopsis. However, Jrh14-10 treatment increased the levels of polyamines (putrescine, spermidine, and spermine) in stressed seedlings, with spermidine particularly effective in reducing H2O2 levels and enhancing Fv/Fm under NaHCO3 stress. These findings reveal a novel mechanism of PGPR-induced alkaline tolerance, highlighting the crosstalk between ethylene and polyamine pathways, and suggest a strategic redirection of S-adenosylmethionine towards polyamine biosynthesis to combat alkaline stress.


Subject(s)
Arabidopsis , Bacillus licheniformis , Ethylenes , Polyamines , Arabidopsis/genetics , Arabidopsis/drug effects , Arabidopsis/metabolism , Arabidopsis/microbiology , Arabidopsis/physiology , Ethylenes/metabolism , Polyamines/metabolism , Bacillus licheniformis/metabolism , Bacillus licheniformis/genetics , Gene Expression Regulation, Plant/drug effects , Signal Transduction/drug effects , Stress, Physiological , Seedlings/drug effects , Seedlings/genetics , Seedlings/physiology , Seedlings/metabolism , Alkalies/pharmacology , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/genetics
8.
Anal Chim Acta ; 1317: 342910, 2024 Aug 15.
Article in English | MEDLINE | ID: mdl-39030010

ABSTRACT

Highly sensitive and rapid detection of ethylene, the smallest alkene of great significance in human physiological metabolism remains a great challenge. In this study, we developed a new photoionization-induced substitution reaction chemical ionization time-of-flight mass spectrometry (PSCI-TOFMS) for trace exhaled ethylene detection. An intriguing ionization phenomenon involving a substitution reaction between the CH2Br2+ reactant ion and ethylene molecule was discovered and studied for the first time. The formation of readily identifiable [CH2Br·C2H4]+ product ion greatly enhanced the ionization efficiency of ethylene, which led to approximately 800-fold improvement of signal intensity over that in single photon ionization mode. The CH2Br2+ reactant ion intensity and ion-molecule reaction time were optimized, and a Nafion tube was employed to eliminate the influence of humidity on the ionization of ethylene. Consequently, a limit of detection (LOD) as low as 0.1 ppbv for ethylene was attained within 30 s at 100 % relative humidity. The application of PSCI-TOFMS on the rapid detection of trace amounts of exhaled ethylene from healthy smoker and non-smoker volunteers demonstrated the satisfactory performance and potential of this system for trace ethylene measurement in clinical diagnosis, atmospheric measurement, and process monitoring.


Subject(s)
Ethylenes , Ethylenes/chemistry , Ethylenes/analysis , Humans , Limit of Detection , Breath Tests/methods , Photochemical Processes , Exhalation , Mass Spectrometry/methods
9.
BMC Plant Biol ; 24(1): 641, 2024 Jul 06.
Article in English | MEDLINE | ID: mdl-38971719

ABSTRACT

BACKGROUND: Early blight and brown leaf spot are often cited as the most problematic pathogens of tomato in many agricultural regions. Their causal agents are Alternaria spp., a genus of Ascomycota containing numerous necrotrophic pathogens. Breeding programs have yielded quantitatively resistant commercial cultivars, but fungicide application remains necessary to mitigate the yield losses. A major hindrance to resistance breeding is the complexity of the genetic determinants of resistance and susceptibility. In the absence of sufficiently resistant germplasm, we sequenced the transcriptomes of Heinz 1706 tomatoes treated with strongly virulent and weakly virulent isolates of Alternaria spp. 3 h post infection. We expanded existing functional gene annotations in tomato and using network statistics, we analyzed the transcriptional modules associated with defense and susceptibility. RESULTS: The induced responses are very distinct. The weakly virulent isolate induced a defense response of calcium-signaling, hormone responses, and transcription factors. These defense-associated processes were found in a single transcriptional module alongside secondary metabolite biosynthesis genes, and other defense responses. Co-expression and gene regulatory networks independently predicted several D clade ethylene response factors to be early regulators of the defense transcriptional module, as well as other transcription factors both known and novel in pathogen defense, including several JA-associated genes. In contrast, the strongly virulent isolate elicited a much weaker response, and a separate transcriptional module bereft of hormone signaling. CONCLUSIONS: Our findings have predicted major defense regulators and several targets for downstream functional analyses. Combined with our improved gene functional annotation, they suggest that defense is achieved through induction of Alternaria-specific immune pathways, and susceptibility is mediated by modulating hormone responses. The implication of multiple specific clade D ethylene response factors and upregulation of JA-associated genes suggests that host defense in this pathosystem involves ethylene response factors to modulate jasmonic acid signaling.


Subject(s)
Alternaria , Disease Resistance , Gene Regulatory Networks , Plant Diseases , Solanum lycopersicum , Plant Diseases/microbiology , Plant Diseases/genetics , Plant Diseases/immunology , Solanum lycopersicum/microbiology , Solanum lycopersicum/genetics , Solanum lycopersicum/immunology , Alternaria/physiology , Alternaria/pathogenicity , Disease Resistance/genetics , Gene Expression Regulation, Plant , Transcriptome , Plant Growth Regulators/metabolism , Ethylenes/metabolism
10.
Chem Pharm Bull (Tokyo) ; 72(8): 731-746, 2024.
Article in English | MEDLINE | ID: mdl-39085089

ABSTRACT

Nitrones are widely used as 1,3-dipoles in organic synthesis, but control of their reactions is not always easy. This review outlines our efforts to make the reactions of nitrones more predictable and easier to use. These efforts can be categorized into (1) 1,3-nucleophilic addition reaction of ketene silyl acetals to nitrones, (2) geometry-controlled cycloaddition of C-alkoxycarbonyl nitrones, (3) stereo-controlled cycloaddition using double asymmetric induction, and (4) generation of nitrones by N-selective modification of oximes.


Subject(s)
Nitrogen Oxides , Nitrogen Oxides/chemistry , Nitrogen Oxides/chemical synthesis , Cycloaddition Reaction , Molecular Structure , Acetals/chemistry , Acetals/chemical synthesis , Ketones/chemistry , Ketones/chemical synthesis , Oximes/chemistry , Oximes/chemical synthesis , Ethylenes/chemistry , Stereoisomerism
11.
Sci Rep ; 14(1): 17357, 2024 Jul 29.
Article in English | MEDLINE | ID: mdl-39075202

ABSTRACT

The environmental contamination by extremophile Aspergillus species, i.e., Aflatoxin B1, is hardly controllable in Southeast Asia and Sub-Saharan Africa, which lack handling resources and controlled storage facilities. Acute aflatoxicosis poisoning from aflatoxin-prone dietary staples could cause acute hepatic necrosis, acute liver failure, and death. Here, as the cheaper, more straightforward, and facile on-site diagnostic kit is needed, we report an ultraviolet-excitable optical aptasensor based on a fluorinated ethylene propylene film strip. Molecular dynamics on the aptamer.AFB1 complex revealed that the AFB1 to the aptamer increases the overall structural stability, suggesting that the aptamer design is suitable for the intended application. Under various influencing factors, the proposed label-free strategy offers a fast 20-min on-site fabrication simplicity and 19-day shelf-life. The one-pot incubation provides an alternative to catalytic detection and exhibited 4 times reusability. The recovery of crude brown sugar, processed peanuts, and long-grain rice were 102.74 ± 0.41 (n = 3), 86.90 ± 3.38 (n = 3), and 98.50 ± 0.42 (n = 3), comparable to High-Performance Liquid Chromatography-Photodiode Array Detector results. This study is novel owing to the peculiar UV-active spectrum fingerprint and the convenient use of hydrophobic film strips that could promote breakthrough innovations and new frontiers for on-site/forensic detection of environmental pollutants.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , Aptamers, Nucleotide/chemistry , Biosensing Techniques/methods , Ultraviolet Rays , Aflatoxin B1/analysis , Aflatoxin B1/chemistry , Ethylenes/chemistry , Humans , Aspergillus , Aflatoxin Poisoning , Fluorocarbon Polymers
12.
Sci Adv ; 10(30): eado2825, 2024 Jul 26.
Article in English | MEDLINE | ID: mdl-39058774

ABSTRACT

Ethylene plays its essential roles in plant development, growth, and defense responses by controlling the transcriptional reprograming, in which EIN2-C-directed regulation of histone acetylation is the first key step for chromatin to perceive ethylene signaling. But how the nuclear acetyl coenzyme A (acetyl CoA) is produced to ensure the ethylene-mediated histone acetylation is unknown. Here we report that ethylene triggers the accumulation of the pyruvate dehydrogenase complex (PDC) in the nucleus to synthesize nuclear acetyl CoA to regulate ethylene response. PDC is identified as an EIN2-C nuclear partner, and ethylene triggers its nuclear accumulation. Mutations in PDC lead to an ethylene hyposensitivity that results from the reduction of histone acetylation and transcription activation. Enzymatically active nuclear PDC synthesizes nuclear acetyl CoA for EIN2-C-directed histone acetylation and transcription regulation. These findings uncover a mechanism by which PDC-EIN2 converges the mitochondrial enzyme-mediated nuclear acetyl CoA synthesis with epigenetic and transcriptional regulation for plant hormone response.


Subject(s)
Acetyl Coenzyme A , Arabidopsis Proteins , Arabidopsis , Cell Nucleus , Ethylenes , Gene Expression Regulation, Plant , Histones , Pyruvate Dehydrogenase Complex , Acetylation , Ethylenes/metabolism , Pyruvate Dehydrogenase Complex/metabolism , Pyruvate Dehydrogenase Complex/genetics , Histones/metabolism , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/genetics , Cell Nucleus/metabolism , Acetyl Coenzyme A/metabolism , Transcription, Genetic , Mutation , Signal Transduction , Receptors, Cell Surface
13.
Int J Mol Sci ; 25(11)2024 May 24.
Article in English | MEDLINE | ID: mdl-38891917

ABSTRACT

The European "Green Deal" policies are shifting toward more sustainable and environmentally conscious agricultural practices, reducing the use of chemical fertilizer and pesticides. This implies exploring alternative strategies. One promising alternative to improve plant nutrition and reinforce plant defenses is the use of beneficial microorganisms in the rhizosphere, such as "Plant-growth-promoting rhizobacteria and fungi". Despite the great abundance of iron (Fe) in the Earth's crust, its poor solubility in calcareous soil makes Fe deficiency a major agricultural issue worldwide. Among plant promoting microorganisms, the yeast Debaryomyces hansenii has been very recently incorporated, for its ability to induce morphological and physiological key responses to Fe deficiency in plants, under hydroponic culture conditions. The present work takes it a step further and explores the potential of D. hansenii to improve plant nutrition and stimulate growth in cucumber plants grown in calcareous soil, where ferric chlorosis is common. Additionally, the study examines D. hansenii's ability to induce systemic resistance (ISR) through a comparative relative expression study by qRT-PCR of ethylene (ET) biosynthesis (ACO1), or ET signaling (EIN2 and EIN3), and salicylic acid (SA) biosynthesis (PAL)-related genes. The results mark a significant milestone since D. hansenii not only enhances nutrient uptake and stimulates plant growth and flower development but could also amplify induced systemic resistance (ISR). Although there is still much work ahead, these findings make D. hansenii a promising candidate to be used for sustainable and environmentally friendly integrated crop management.


Subject(s)
Crop Production , Fertilizers , Crop Production/methods , Iron/metabolism , Cucumis sativus/microbiology , Cucumis sativus/growth & development , Cucumis sativus/metabolism , Crops, Agricultural/microbiology , Crops, Agricultural/growth & development , Crops, Agricultural/metabolism , Iron Deficiencies , Gene Expression Regulation, Plant , Debaryomyces/metabolism , Rhizosphere , Ethylenes/metabolism , Soil Microbiology , Salicylic Acid/metabolism
14.
Int J Mol Sci ; 25(11)2024 May 31.
Article in English | MEDLINE | ID: mdl-38892282

ABSTRACT

The rhizobacterial strain BJ3 showed 16S rDNA sequence similarity to species within the Burkholderia genus. Its complete genome sequence revealed a 97% match with Burkholderia contaminans and uncovered gene clusters essential for plant-growth-promoting traits (PGPTs). These clusters include genes responsible for producing indole acetic acid (IAA), osmolytes, non-ribosomal peptides (NRPS), volatile organic compounds (VOCs), siderophores, lipopolysaccharides, hydrolytic enzymes, and spermidine. Additionally, the genome contains genes for nitrogen fixation and phosphate solubilization, as well as a gene encoding 1-aminocyclopropane-1-carboxylate (ACC) deaminase. The treatment with BJ3 enhanced root architecture, boosted vegetative growth, and accelerated early flowering in Arabidopsis. Treated seedlings also showed increased lignin production and antioxidant capabilities, as well as notably increased tolerance to water deficit and high salinity. An RNA-seq transcriptome analysis indicated that BJ3 treatment significantly activated genes related to immunity induction, hormone signaling, and vegetative growth. It specifically activated genes involved in the production of auxin, ethylene, and salicylic acid (SA), as well as genes involved in the synthesis of defense compounds like glucosinolates, camalexin, and terpenoids. The expression of AP2/ERF transcription factors was markedly increased. These findings highlight BJ3's potential to produce various bioactive metabolites and its ability to activate auxin, ethylene, and SA signaling in Arabidopsis, positioning it as a new Burkholderia strain that could significantly improve plant growth, stress resilience, and immune function.


Subject(s)
Arabidopsis , Burkholderia , Stress, Physiological , Burkholderia/genetics , Burkholderia/metabolism , Burkholderia/growth & development , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis/microbiology , Stress, Physiological/genetics , Plant Development/genetics , Indoleacetic Acids/metabolism , Gene Expression Regulation, Plant , Genomics/methods , Plant Growth Regulators/metabolism , Plant Roots/microbiology , Plant Roots/growth & development , Plant Roots/genetics , Plant Roots/metabolism , Ethylenes/metabolism
15.
Physiol Plant ; 176(3): e14371, 2024.
Article in English | MEDLINE | ID: mdl-38837414

ABSTRACT

The WRKY transcription factor (TF) genes form a large family in higher plants, with 72 members in Arabidopsis (Arabidopsis thaliana). The gaseous phytohormone ethylene (ET) regulates multiple physiological processes in plants. It is known that 1-aminocyclopropane-1-carboxylic acid (ACC) synthases (ACSs, EC 4.4.1.14) limit the enzymatic reaction rate of ethylene synthesis. However, whether WRKY TFs regulate the expression of ACSs and/or ACC oxidases (ACOs, EC 1.14.17.4) remains largely elusive. Here, we demonstrated that Arabidopsis WRKY22 positively regulated the expression of a few ACS and ACO genes, thus promoting ethylene production. Inducible overexpression of WRKY22 caused shorter hypocotyls without ACC treatment. A qRT-PCR screening demonstrated that overexpression of WRKY22 activates the expression of several ACS and ACO genes. The promoter regions of ACS5, ACS11, and ACO5 were also activated by WRKY22, which was revealed by a dual luciferase reporter assay. A follow-up chromatin immunoprecipitation coupled with quantitative PCR (ChIP-qPCR) and electrophoretic mobility shift assay (EMSA) showed that the promoter regions of ACS5 and ACO5 could be bound by WRKY22 directly. Moreover, wrky22 mutants had longer primary roots and more lateral roots than wild type, while WRKY22-overexpressing lines showed the opposite phenotype. In conclusion, this study revealed that WRKY22 acts as a novel TF activating, at least, the expression of ACS5 and ACO5 to increase ethylene synthesis and modulate root development.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Ethylenes , Gene Expression Regulation, Plant , Lyases , Plant Roots , Transcription Factors , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis/metabolism , Ethylenes/metabolism , Ethylenes/biosynthesis , Transcription Factors/metabolism , Transcription Factors/genetics , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Plant Roots/genetics , Plant Roots/growth & development , Plant Roots/metabolism , Lyases/genetics , Lyases/metabolism , Amino Acid Oxidoreductases/genetics , Amino Acid Oxidoreductases/metabolism , Promoter Regions, Genetic/genetics , Carbon-Carbon Lyases/metabolism , Carbon-Carbon Lyases/genetics , Transcriptional Activation/genetics
16.
Microb Biotechnol ; 17(6): e14511, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38925606

ABSTRACT

Ethylene and ethylene oxide are widely used in the chemical industry, and ethylene is also important for its role in fruit ripening. Better sensing systems would assist risk management of these chemicals. Here, we characterise the ethylene regulatory system in Mycobacterium strain NBB4 and use these genetic parts to create a biosensor. The regulatory genes etnR1 and etnR2 and cognate promoter Petn were combined with a fluorescent reporter gene (fuGFP) in a Mycobacterium shuttle vector to create plasmid pUS301-EtnR12P. Cultures of M. smegmatis mc2-155(pUS301-EtnR12P) gave a fluorescent signal in response to ethylene oxide with a detection limit of 0.2 µM (9 ppb). By combining the epoxide biosensor cells with another culture expressing the ethylene monooxygenase, the system was converted into an ethylene biosensor. The co-culture was capable of detecting ethylene emission from banana fruit. These are the first examples of whole-cell biosensors for epoxides or aliphatic alkenes. This work also resolves long-standing questions concerning the regulation of ethylene catabolism in bacteria.


Subject(s)
Biosensing Techniques , Ethylene Oxide , Ethylenes , Biosensing Techniques/methods , Ethylenes/metabolism , Ethylene Oxide/metabolism , Mycobacterium/genetics , Mycobacterium/metabolism , Musa/microbiology , Genes, Reporter , Plasmids/genetics
17.
Genes (Basel) ; 15(6)2024 Jun 02.
Article in English | MEDLINE | ID: mdl-38927667

ABSTRACT

The Cucumber mosaic virus (CMV) presents a significant threat to pepper cultivation worldwide, leading to substantial yield losses. We conducted a transcriptional comparative study between CMV-resistant (PBC688) and -susceptible (G29) pepper accessions to understand the mechanisms of CMV resistance. PBC688 effectively suppressed CMV proliferation and spread, while G29 exhibited higher viral accumulation. A transcriptome analysis revealed substantial differences in gene expressions between the two genotypes, particularly in pathways related to plant-pathogen interactions, MAP kinase, ribosomes, and photosynthesis. In G29, the resistance to CMV involved key genes associated with calcium-binding proteins, pathogenesis-related proteins, and disease resistance. However, in PBC688, the crucial genes contributing to CMV resistance were ribosomal and chlorophyll a-b binding proteins. Hormone signal transduction pathways, such as ethylene (ET) and abscisic acid (ABA), displayed distinct expression patterns, suggesting that CMV resistance in peppers is associated with ET and ABA. These findings deepen our understanding of CMV resistance in peppers, facilitating future research and variety improvement.


Subject(s)
Capsicum , Cucumovirus , Disease Resistance , Gene Expression Regulation, Plant , Plant Diseases , Cucumovirus/genetics , Cucumovirus/pathogenicity , Disease Resistance/genetics , Plant Diseases/virology , Plant Diseases/genetics , Capsicum/virology , Capsicum/genetics , Abscisic Acid/metabolism , Abscisic Acid/pharmacology , Ethylenes/metabolism , Transcriptome , Plant Proteins/genetics , Plant Proteins/metabolism , Gene Expression Profiling/methods , Host-Pathogen Interactions/genetics , Plant Growth Regulators/genetics , Plant Growth Regulators/pharmacology
18.
Int J Mol Sci ; 25(12)2024 Jun 07.
Article in English | MEDLINE | ID: mdl-38928022

ABSTRACT

Various metabolites, including phytohormones, phytoalexins, and amino acids, take part in the plant immune system. Herein, we analyzed the effects of L-methionine (Met), a sulfur-containing amino acid, on the plant immune system in tomato. Treatment with low concentrations of Met enhanced the resistance of tomato to a broad range of diseases caused by the hemi-biotrophic bacterial pathogen Pseudomonas syringae pv. tomato (Pst) and the necrotrophic fungal pathogen Botrytis cinerea (Bc), although it did not induce the production of any antimicrobial substances against these pathogens in tomato leaf tissues. Analyses of gene expression and phytohormone accumulation indicated that Met treatment alone did not activate the defense signals mediated by salicylic acid, jasmonic acid, and ethylene. However, the salicylic acid-responsive defense gene and the jasmonic acid-responsive gene were induced more rapidly in Met-treated plants after infection with Pst and Bc, respectively. These findings suggest that low concentrations of Met have a priming effect on the phytohormone-mediated immune system in tomato.


Subject(s)
Botrytis , Cyclopentanes , Gene Expression Regulation, Plant , Methionine , Plant Diseases , Plant Growth Regulators , Pseudomonas syringae , Solanum lycopersicum , Solanum lycopersicum/microbiology , Solanum lycopersicum/immunology , Solanum lycopersicum/genetics , Solanum lycopersicum/drug effects , Solanum lycopersicum/metabolism , Methionine/pharmacology , Gene Expression Regulation, Plant/drug effects , Plant Diseases/microbiology , Plant Diseases/immunology , Plant Diseases/genetics , Pseudomonas syringae/pathogenicity , Cyclopentanes/pharmacology , Cyclopentanes/metabolism , Plant Growth Regulators/pharmacology , Oxylipins/pharmacology , Oxylipins/metabolism , Plant Immunity/drug effects , Disease Resistance/drug effects , Disease Resistance/immunology , Salicylic Acid/pharmacology , Salicylic Acid/metabolism , Plant Leaves/immunology , Plant Leaves/microbiology , Plant Leaves/drug effects , Plant Proteins/genetics , Plant Proteins/metabolism , Ethylenes/metabolism
19.
BMC Plant Biol ; 24(1): 522, 2024 Jun 10.
Article in English | MEDLINE | ID: mdl-38853241

ABSTRACT

BACKGROUND: Several WRKY transcription factors (TFs), including CaWRKY6, CaWRKY22, CaWRKY27, and CaWRKY40 are known to govern the resistance of pepper (Capsicum annuum L.) plants to Ralstonia solanacearum infestation (RSI) and other abiotic stresses. However, the molecular mechanisms underlying these processes remain elusive. METHODS: This study functionally described CaWRKY3 for its role in pepper immunity against RSI. The roles of phytohormones in mediating the expression levels of CaWRKY3 were investigated by subjecting pepper plants to 1 mM salicylic acid (SA), 100 µM methyl jasmonate (MeJA), and 100 µM ethylene (ETH) at 4-leaf stage. A virus-induced gene silencing (VIGS) approach based on the Tobacco Rattle Virus (TRV) was used to silence CaWRKY3 in pepper, and transiently over-expressed to infer its role against RSI. RESULTS: Phytohormones and RSI increased CaWRKY3 transcription. The transcriptions of defense-associated marker genes, including CaNPR1, CaPR1, CaDEF1, and CaHIR1 were decreased in VIGS experiment, which made pepper less resistant to RSI. Significant hypersensitive (HR)-like cell death, H2O2 buildup, and transcriptional up-regulation of immunological marker genes were noticed in pepper when CaWRKY3 was transiently overexpressed. Transcriptional activity of CaWRKY3 was increased with overexpression of CaWRKY6, CaWRKY22, CaWRKY27, and CaWRKY40, and vice versa. In contrast, Pseudomonas syringae pv tomato DC3000 (Pst DC3000) was easily repelled by the innate immune system of transgenic Arabidopsis thaliana that overexpressed CaWRKY3. The transcriptions of defense-related marker genes like AtPR1, AtPR2, and AtNPR1 were increased in CaWRKY3-overexpressing transgenic A. thaliana plants. CONCLUSION: It is concluded that CaWRKY3 favorably regulates phytohormone-mediated synergistic signaling, which controls cell death in plant and immunity of pepper plant against bacterial infections.


Subject(s)
Capsicum , Gene Expression Regulation, Plant , Plant Diseases , Plant Growth Regulators , Plant Immunity , Plant Proteins , Ralstonia solanacearum , Transcription Factors , Ralstonia solanacearum/physiology , Capsicum/genetics , Capsicum/immunology , Capsicum/microbiology , Transcription Factors/genetics , Transcription Factors/metabolism , Plant Diseases/microbiology , Plant Diseases/immunology , Plant Diseases/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Growth Regulators/metabolism , Cyclopentanes/metabolism , Disease Resistance/genetics , Oxylipins/metabolism , Salicylic Acid/metabolism , Ethylenes/metabolism , Gene Silencing , Acetates/pharmacology
20.
Int J Biol Macromol ; 271(Pt 2): 132766, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38823742

ABSTRACT

The efficient development and utilization of green biomass-based macromolecule engineering materials are essential for the sustainable development of human civilization. In this study, lignin-based ethylene-propylene-diene-monomer (EPDM) composites with excellent mechanical performance were fabricated using a simple method. The effects of water-insoluble enzymatically hydrolyzed lignin (EL) and alkali lignin (KL) on the mechanical performance of the composites were investigated separately. The results showed that the tensile strength of EPDM reinforced with KL and EL increased to 24.5 MPa and 22.1 MPa, respectively, surpassing that of the carbon black (CB)-reinforced EPDM. After 72 h of thermo-oxidative aging, the retention rates of the tensile strength and elongation at break in the lignin-reinforced EPDM were much better than those formed with pure CB, indicating that lignin significantly improved the thermo-oxidative aging resistance of the composites. In summary, the Zn2+ coordination bonds formed between the interface of EPDM and lignin in lignin/CB/EPDM ternary composites effectively improved the mechanical performance and aging resistance of the composites. This study has significant implications for enhancing the utilization of lignin and green functional polymer materials.


Subject(s)
Lignin , Lignin/chemistry , Tensile Strength , Ethylenes/chemistry , Structure-Activity Relationship , Zinc/chemistry , Oxidation-Reduction , Cross-Linking Reagents/chemistry , Elastomers
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