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1.
Food Chem ; 462: 140943, 2025 Jan 01.
Article in English | MEDLINE | ID: mdl-39217744

ABSTRACT

Application of microbial-based biopreparations as a pre-harvest strategy offers a method to obtain sustainable agricultural practices and could be an important approach for advancing food science, promoting sustainability, and meeting global food market demands. The impact of a bacterial-fungal biopreparation mixture on soil-plant-microbe interactions, fruit chemical composition and yield of 7 raspberry clones was investigated by examining the structural and functional profiles of microbial communities within leaves, fruits, and soil. Biopreparation addition caused the enhancement of the microbiological utilization of specific compounds, such as d-mannitol, relevant in plant-pathogen interactions and overall plant health. The biopreparation treatment positively affected the nitrogen availability in soil (9-160%). The analysis of plant stress marker enzymes combined with the evaluation of fruit quality and chemical properties highlight changes inducted by the pre-harvest biopreparation application. Chemical analyses highlight biopreparations' role in soil and fruit quality improvement, promoting sustainable agriculture. This effect was dependent on tested clones, showing increase of soluble solid content in fruits, concentration of polyphenols or the sensory quality of the fruits. The results of the next-generation sequencing indicated increase in the effective number of bacterial species after biopreparation treatment. The network analysis showed stimulating effect of biopreparation on microbial communities by enhancing microbial interactions (increasing the number of network edges up to 260%) of and affecting the proportions of mutual relationships between both bacteria and fungi. These findings show the potential of microbial-based biopreparation in enhancing raspberry production whilst promoting sustainable practices and maintaining environmental homeostasis and giving inshght in holistic understanding of microbial-based approaches for advancing food science monitoring.


Subject(s)
Bacteria , Fruit , Fungi , Rubus , Soil Microbiology , Soil , Fruit/chemistry , Fruit/microbiology , Fruit/metabolism , Rubus/chemistry , Rubus/microbiology , Rubus/metabolism , Rubus/growth & development , Soil/chemistry , Bacteria/classification , Bacteria/metabolism , Bacteria/genetics , Bacteria/isolation & purification , Bacteria/growth & development , Fungi/metabolism , Fungi/growth & development , Agriculture , Microbiota
2.
Food Chem ; 462: 140966, 2025 Jan 01.
Article in English | MEDLINE | ID: mdl-39197244

ABSTRACT

Noni fruit has an unpleasant flavour but is highly bioactive. Therefore, it is necessary to clarify the effect of temperature regulation on quality of fermented noni fruit. In the present study, the formation of flavours, amino acid profiles, and iridoid glycosides during noni fruit fermentation at different temperatures were investigated. We initially found that different temperatures affected core microbial communities. The general evolutionary trends of Acetobacter and Gluconobacter were influenced by different temperatures. Furthermore, high temperature helped maintain low octanoic and hexanoic acids. Subsequently, we found that high temperature improved total amino acids and iridoid glycosides. The correlation network analysis revealed that bacterial communities impacted the quality (volatile flavours, amino acid profiles, and iridoid glycosides) of fermented noni fruit. Overall, altering the temperature induced variations in microbial communities and quality during the noni fruit fermentation process. These results are instrumental in the pursuit of quality control in natural fermentation processes.


Subject(s)
Amino Acids , Bacteria , Fermentation , Fruit , Iridoid Glycosides , Microbiota , Morinda , Temperature , Fruit/chemistry , Fruit/metabolism , Fruit/microbiology , Amino Acids/metabolism , Amino Acids/analysis , Bacteria/metabolism , Bacteria/classification , Bacteria/genetics , Bacteria/isolation & purification , Morinda/chemistry , Morinda/metabolism , Iridoid Glycosides/metabolism , Iridoid Glycosides/analysis , Iridoid Glycosides/chemistry , Volatile Organic Compounds/metabolism , Volatile Organic Compounds/chemistry , Flavoring Agents/metabolism , Flavoring Agents/chemistry
3.
Microb Biotechnol ; 17(10): e70017, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39364588

ABSTRACT

The efficiency of global crop production is under threat from microbial pathogens which is likely to be worsened by climate change. Major contributors to plant disease are Pseudomonas syringae (P. syringae) pathovars which affect a variety of important crops. This opinion piece focuses on P. syringae pathovars actinidiae and syringae, which affect kiwifruit and stone fruits, respectively. We discuss some of the current control strategies for these pathogens and highlight recent research developments in combined biocontrol agents such as bacteriophages and combinations of bacteriophages with known anti-microbials such as antibiotics and bacteriocins.


Subject(s)
Plant Diseases , Pseudomonas syringae , Plant Diseases/microbiology , Plant Diseases/prevention & control , Pseudomonas syringae/genetics , Actinidia/microbiology , Biological Control Agents , Anti-Bacterial Agents , Bacteriophages/physiology , Fruit/microbiology , Bacteriocins/metabolism , Bacteriocins/biosynthesis
4.
Compr Rev Food Sci Food Saf ; 23(6): e70030, 2024 Nov.
Article in English | MEDLINE | ID: mdl-39379298

ABSTRACT

Fermented fruits and vegetables (FFVs) are not only rich in essential nutrients but also contain distinctive flavors, prebiotics, and metabolites. Although omics techniques have gained widespread recognition as an analytical strategy for FFVs, its application still encounters several challenges due to the intricacies of biological systems. This review systematically summarizes the advances, obstacles and prospects of genomics, transcriptomics, proteomics, metabolomics, and multi-omics strategies in FFVs. It is evident that beyond traditional applications, such as the exploration of microbial diversity, protein expression, and metabolic pathways, omics techniques exhibit innovative potential in deciphering stress response mechanisms and uncovering spoilage microorganisms. The adoption of multi-omics strategies is paramount to acquire a multidimensional network fusion, thereby mitigating the limitations of single omics strategies. Although substantial progress has been made, this review underscores the necessity for a comprehensive repository of omics data and the establishment of universal databases to ensure precision in predictions. Furthermore, multidisciplinary integration with other physical or biochemical approaches is imperative, as it enriches our comprehension of this intricate process.


Subject(s)
Fermented Foods , Fruit , Genomics , Metabolomics , Proteomics , Vegetables , Fruit/chemistry , Fruit/microbiology , Vegetables/microbiology , Vegetables/chemistry , Metabolomics/methods , Proteomics/methods , Genomics/methods , Fermented Foods/microbiology , Fermentation , Nutritive Value , Food Microbiology , Bacteria/genetics , Bacteria/metabolism
5.
Int J Mol Sci ; 25(18)2024 Sep 17.
Article in English | MEDLINE | ID: mdl-39337484

ABSTRACT

This study describes the first genome sequence and analysis of Coniella granati, a fungal pathogen with a broad host range, which is responsible for postharvest crown rot, shoot blight, and canker diseases in pomegranates. C. granati is a geographically widespread pathogen which has been reported across Europe, Asia, the Americas, and Africa. Our analysis revealed a 46.8 Mb genome with features characteristic of hemibiotrophic fungi. Approximately one third of its genome was compartmentalised within 'AT-rich' regions exhibiting a low GC content (30 to 45%). These regions primarily comprised transposable elements that are repeated at a high frequency and interspersed throughout the genome. Transcriptome-supported gene annotation of the C. granati genome revealed a streamlined proteome, mirroring similar observations in other pathogens with a latent phase. The genome encoded a relatively compact set of 9568 protein-coding genes with a remarkable 95% having assigned functional annotations. Despite this streamlined nature, a set of 40 cysteine-rich candidate secreted effector-like proteins (CSEPs) was predicted as well as a gene cluster involved in the synthesis of a pomegranate-associated toxin. These potential virulence factors were predominantly located near repeat-rich and AT-rich regions, suggesting that the pathogen evades host defences through Repeat-Induced Point mutation (RIP)-mediated pseudogenisation. Furthermore, 23 of these CSEPs exhibited homology to known effector and pathogenicity genes found in other hemibiotrophic pathogens. The study establishes a foundational resource for the study of the genetic makeup of C. granati, paving the way for future research on its pathogenicity mechanisms and the development of targeted control strategies to safeguard pomegranate production.


Subject(s)
Fungal Proteins , Genome, Fungal , Plant Diseases , Pomegranate , Proteome , Plant Diseases/microbiology , Plant Diseases/genetics , Fungal Proteins/genetics , Fungal Proteins/metabolism , Pomegranate/genetics , Pomegranate/microbiology , Ascomycota/genetics , Ascomycota/pathogenicity , Molecular Sequence Annotation , Fruit/microbiology , Fruit/genetics , Repetitive Sequences, Nucleic Acid/genetics
6.
Pestic Biochem Physiol ; 204: 106040, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39277367

ABSTRACT

The essential oil and ß-cyclodextrin inclusion complex was able to inhibit the growth of Penicillium digitatum, a damaging pathogen that causes green mold in citrus fruit. In this study, cinnamaldehyde-ß-cyclodextrin inclusion complex (ß-CDCA) for controlling citrus green mold was synthesized by the co-precipitation method. Characterization of ß-CDCA revealed that the aromatic ring skeleton of cinnamaldehyde (CA) was successfully embedded into the cavity of ß-CD to form the inclusion complex. ß-CDCA inhibited P. digitatum at a minimum inhibitory concentration (MIC) and minimum fungicidal concentration (MFC) of 4.0 g/L. FT-IR spectroscopy analysis, calcofluor white staining, extracellular alkaline phosphatase (AKP) activity and propidium iodide (PI) staining of hyphae morphology showed that ß-CDCA may damage the cell ultrastructure and membrane permeability of P. digitatum. The study further demonstrated that hydrogen peroxide (H2O2), malondialdehyde (MDA), and reactive oxygen species (ROS) markedly accumulated in 1/2 MIC ß-CDCA treated hyphae. This implied that ß-CDCA inhibited growth of P. digitatum by the triggering oxidative stress, which may have caused cell death by altering cell membrane permeability. In addition, in vivo results showed that ß-CDCA alone or combined with L-phenylalanine (L-PHe) displayed a comparable level to that of prochloraz. Therefore, ß-CDCA combined with L-PHe can thus be used as an eco-friendly preservative for the control green mold in postharvest citrus fruit.


Subject(s)
Acrolein , Citrus , Fungicides, Industrial , Penicillium , Phenylalanine , beta-Cyclodextrins , Acrolein/analogs & derivatives , Acrolein/pharmacology , Penicillium/drug effects , Citrus/microbiology , beta-Cyclodextrins/pharmacology , Phenylalanine/pharmacology , Phenylalanine/analogs & derivatives , Fungicides, Industrial/pharmacology , Microbial Sensitivity Tests , Reactive Oxygen Species/metabolism , Fruit/microbiology , Plant Diseases/microbiology , Plant Diseases/prevention & control , Hydrogen Peroxide/pharmacology , Malondialdehyde/metabolism
7.
Sci Rep ; 14(1): 21067, 2024 09 09.
Article in English | MEDLINE | ID: mdl-39256494

ABSTRACT

A complete three-dimensional reconstruction of the internal damage (oviposition holes, entry and exit galleries, cavities caused by fungal infection) of three destructive pests of olive fruit was obtained using micro-computed tomography. In the case of the olive fruit fly (Bactrocera oleae), complete reconstruction of the galleries was achieved. The galleries were colour-coded according to the size of the internal lumens produced by larval instars. In the case of the olive moth (Prays oleae), we confirmed that the larvae only consume olive stones, leaving pulp tissue intact. This study revealed the evolutionary defensive adaptation developed by larvae, creating entrance/exit gallery in the form of a zigzag with alternating angles to avoid the action of possible parasitoids. In the case of olive fruit rot, caused by fungal infection transmitted by the midge (Lasioptera berlesiana), microtomography revealed the infection cavity, which was delimited by a protective layer of tissue produced by the plant to isolate the infection zone, which contained fungal hyphae and reproductive organs of the fungus. Two ovoid cavities were observed below a single external orifice in the concave necrotic depression. These results were interpreted as successive ovipositions of B. oleae, followed by the parasitoid L. berlesiana. High-resolution 3D rendered images are included as well as supplementary videos that could be useful tools for future research and teaching aids.


Subject(s)
Fruit , Olea , Plant Diseases , X-Ray Microtomography , Animals , Olea/parasitology , X-Ray Microtomography/methods , Fruit/parasitology , Fruit/microbiology , Plant Diseases/parasitology , Plant Diseases/microbiology , Tephritidae/parasitology , Moths/parasitology , Larva
8.
Food Microbiol ; 124: 104600, 2024 Dec.
Article in English | MEDLINE | ID: mdl-39244359

ABSTRACT

This study aimed to assess the impact of Saccharomyces cerevisiae and different non-Saccharomyces cerevisiae (Zygosaccharomyces bailii, Hanseniaspora opuntiae and Zygosaccharomyces rouxii) on the volatile compounds and sensory properties of low-alcohol pear beverages fermented from three varieties of pear juices (Korla, Laiyang and Binzhou). Results showed that all three pear juices were favorable matrices for yeasts growth. Non-Saccharomyces cerevisiae exhibited a higher capacity for acetate ester production compared to Saccharomyces cerevisiae, resulting in a significant enhancement in sensory complexity of the beverages. PCA and sensory analysis demonstrated that pear varieties exerted a stronger influence on the crucial volatile components and aroma characteristics of the fermented beverages compared to the yeast species. CA results showed different yeast strains exhibited suitability for the fermentation of specific pear juice varieties.


Subject(s)
Fermentation , Odorants , Pyrus , Saccharomyces cerevisiae , Volatile Organic Compounds , Volatile Organic Compounds/metabolism , Volatile Organic Compounds/analysis , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae/growth & development , Pyrus/microbiology , Pyrus/chemistry , Odorants/analysis , Fruit and Vegetable Juices/analysis , Fruit and Vegetable Juices/microbiology , Taste , Humans , Zygosaccharomyces/metabolism , Zygosaccharomyces/growth & development , Hanseniaspora/metabolism , Hanseniaspora/growth & development , Fruit/microbiology , Fruit/chemistry , Saccharomycetales
9.
Food Microbiol ; 124: 104608, 2024 Dec.
Article in English | MEDLINE | ID: mdl-39244360

ABSTRACT

Photodynamic inactivation is an emerging antimicrobial treatment that can be enhanced by employing exogenous photosensitizers to eradicate foodborne pathogens. This study investigated a novel combinatory strategy to eradicate Listeria monocytogenes using blackthorn fruit peel (BFP) and blue light (BL). Extracts of BFP were characterized in terms of polyphenolic content, individual constituents, and antioxidant and antimicrobial activity. The concentration of phenolic compounds and antioxidant activity were both found to be determinants of antimicrobial activity. It was further speculated that flavonols, predominantly quercetin and rutin, were responsible for the activity of BFP against L. monocytogenes. A combination of BFP and BL resulted in a rapid inactivation of the pathogen by up to 4 log CFU/mL at 58.5 J/cm2, corresponding to 15 min BL illumination. Flow cytometry analysis revealed that the bacterial cells lost activity and suffered extensive membrane damage, exceeding 90% of the population. After photosensitizing L. monocytogenes with the BFP constituents quercetin and rutin, a 1.3-log reduction was observed. When applied together, these compounds could inflict the same damaging effect on cells as they did individually when effects were added. Therefore, the results indicate that BFP represents a natural source of (pro-)photosensitizers, which act additively to create inactivation effects. This study may help identify more effective plant-based photosensitizers to control L. monocytogenes in food-related applications.


Subject(s)
Fruit , Light , Listeria monocytogenes , Photosensitizing Agents , Plant Extracts , Polyphenols , Listeria monocytogenes/drug effects , Listeria monocytogenes/radiation effects , Listeria monocytogenes/growth & development , Polyphenols/pharmacology , Plant Extracts/pharmacology , Plant Extracts/chemistry , Fruit/chemistry , Fruit/microbiology , Photosensitizing Agents/pharmacology , Crataegus/chemistry , Anti-Bacterial Agents/pharmacology , Antioxidants/pharmacology , Quercetin/pharmacology , Microbial Viability/drug effects , Microbial Viability/radiation effects , Blue Light
10.
Food Microbiol ; 124: 104613, 2024 Dec.
Article in English | MEDLINE | ID: mdl-39244365

ABSTRACT

Anthracnose caused by Colletotrichum scovillei is a significant disease of pepper, including in postharvest stage. Bacillus species represent a potential microbial resource for controlling postharvest plant diseases. Here, a strain HG-8-2 was obtained and identified as Bacillus velezensis through morphological, biochemical, physiological, and molecular analyses. The culture filtrate showed highly antifungal activity against C. scovillei both in vitro and on pepper fruit. Crude lipopeptide extracts, which had excellent stability, could effectively inhibit mycelial growth of C. scovillei with an EC50 value of 28.48 ± 1.45 µg mL-1 and inhibited conidial germination. Pretreatment with the extracts reduced the incidence and lesion size of postharvest anthracnose on pepper fruit. Analysis using propidium iodide staining, malondialdehyde content detection and scanning electron microscope observation suggested that the crude lipopeptide extracts harbored antifungal activity by damaging cell membranes and mycelial structures. The RNA-seq analysis conducted on C. scovillei samples treated with the extracts, as compared to untreated samples, revealed significant alterations in the expression of multiple genes involved in protein biosynthesis. Overall, these results demonstrated that B. velezensis HG-8-2 and its crude lipopeptide extracts exhibit highly antagonistic ability against C. scovillei, thereby offering an effective biological agent for the control of anthracnose in pepper fruit.


Subject(s)
Bacillus , Capsicum , Colletotrichum , Fruit , Plant Diseases , Colletotrichum/drug effects , Colletotrichum/growth & development , Capsicum/microbiology , Bacillus/genetics , Bacillus/metabolism , Bacillus/physiology , Plant Diseases/microbiology , Plant Diseases/prevention & control , Fruit/microbiology , Antifungal Agents/pharmacology , Antifungal Agents/metabolism , Spores, Fungal/drug effects , Spores, Fungal/growth & development , Lipopeptides/pharmacology , Lipopeptides/metabolism , Mycelium/growth & development , Mycelium/drug effects , Biological Control Agents/pharmacology
11.
Sci Rep ; 14(1): 20658, 2024 09 05.
Article in English | MEDLINE | ID: mdl-39232047

ABSTRACT

Due to its nutritional value and health benefits, the date palm (Phoenix dactylifera L.) is an essential dietary food crop throughout Middle Eastern and African countries. Consumers are concerned about the possible microbial contamination of dates, especially since most dates arriving in local markets are unprocessed. The absence of processing increases the possibility of microbial contamination, which raises the probability of microbial contamination. This study aims to analyze and evaluate the variability of fungal and bacterial microbiota identified in the most popular date palm fruits in Saudi Arabia. The study assessed ten date variety fruits from the most popular date palm varieties for consumption in Saudi Arabia and analyzed the microbial count. Morphological and molecular characterization and comparison of nuclear ribosomal DNA internal transcribed spacer (ITS) sequences identified 78 fungi, including 36 distinct species across 15 fungal genera. Alternaria, Fusarium, Curvilaria, Aspergillus, and Penicillium were the most frequent genera among the ten fruit cultivars studied, according to ITS-rDNA sequence analysis. Furthermore, 36 bacterial isolates were obtained from ten date varieties studied, each with a unique colony morphology. These isolates were identified based on sequence alignment and comparison of their 16S rDNA internal spacer regions to those available in public databases. The results showed that the bacterial isolates included 15 species from five bacterial genera. The results suggested that Bacillus, Stenotrophomonas, and Brucella were the prevailing genera among the ten tested fruit varieties. Some bacterial genera, such as Brucella, Achromobacter, and Stenotrophomonas, are well-known potential human pathogens. Chaetomium globosum was also recognized as air pollution causing adverse health effects such as allergies and as the causal agent of human fungal infections among the tested date varieties; the Rashodiah type exhibited the highest fungal contamination, whereas the Sagai variety displayed the lowest fungal contamination. Conversely, the Sukkari, Barhi, and Mejdool varieties were the most contaminated with bacteria among the ten tested varieties, while the Khalas variety showed the least bacterial contamination. To the best of the authors' knowledge, this study provides the initial comprehensive account of the molecular and morphological identification of all fungal and bacterial genera associated with date palm (P. dactylifera) fruits.


Subject(s)
Bacteria , Biodiversity , Fruit , Fungi , Microbiota , Phoeniceae , Phoeniceae/microbiology , Phoeniceae/genetics , Fruit/microbiology , Microbiota/genetics , Fungi/classification , Fungi/genetics , Fungi/isolation & purification , Bacteria/classification , Bacteria/genetics , Bacteria/isolation & purification , Saudi Arabia , Phylogeny , RNA, Ribosomal, 16S/genetics , DNA, Ribosomal Spacer/genetics
12.
J Agric Food Chem ; 72(37): 20513-20526, 2024 Sep 18.
Article in English | MEDLINE | ID: mdl-39241186

ABSTRACT

Pectic polysaccharides can beneficially shape the human microbiota. However, individual variability in the microbial response, especially the response between normal-weight (NW) and overweight (OW) people, is rarely understood. Therefore, we performed batch fermentation using inulin (INU), commercial pectin (CP), and pectic polysaccharides extracted from goji berry (GPP) and raspberry (RPP) by microbiota from five normal-weight (NW) and five overweight (OW) donors. The degree of specificity of fiber was negatively correlated to its fermentable rate and microbial response. Meanwhile, we found that microbiota from OW donors had a stronger fiber-degrading capacity than NW donors. The result of correlation between individual basal microbiota and the fermentable rate indicated Dialister, Megamonas, Oscillospiraceae_NK4A214, Prevotella, Ruminococcus, and unidentified_Muribaculaceae may be the key bacteria. In summary, we highlighted a new perspective regarding the interactive relationship between different fibers and fecal microbiota from different donors that may be helpful to design fiber interventions for individuals with different microbiota.


Subject(s)
Bacteria , Feces , Fermentation , Gastrointestinal Microbiome , Overweight , Pectins , Humans , Overweight/metabolism , Overweight/microbiology , Bacteria/metabolism , Bacteria/classification , Bacteria/isolation & purification , Bacteria/genetics , Adult , Male , Feces/microbiology , Female , Pectins/metabolism , Dietary Fiber/metabolism , Inulin/metabolism , Young Adult , Rubus/chemistry , Rubus/microbiology , Rubus/metabolism , Middle Aged , Fruit/chemistry , Fruit/microbiology , Fruit/metabolism
13.
J Food Sci ; 89(10): 6616-6627, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39230384

ABSTRACT

This study investigated the potential use of curcumin-mediated photodynamic treatment as a postharvest decontamination technique to reduce microbial load and growth and therefore extend the shelf life of strawberries. Curcumin was applied on strawberries, followed by illumination and storage at 4°C for 16 days. Strawberries were evaluated for decay, microbial load, and physicochemical properties such as weight loss, color, and firmness during storage. The findings revealed that curcumin-mediated photodynamic treatment effectively reduced the decay incidence and severity in strawberries, with 20% less decay occurrence compared to untreated fruits, which was shown to be dependent on curcumin concentration. While a complete reduction in microbial load was observed upon treatment, microbial growth remained unaffected throughout storage. Moreover, photodynamic treatment did not show any adverse impact on color properties and firmness of strawberries. This eco-friendly technique presents potential for fruit's shelf-life extension, although optimization of treatment parameters and photodynamic unit design seems to be essential.


Subject(s)
Curcumin , Food Preservation , Food Storage , Fragaria , Fruit , Fragaria/microbiology , Curcumin/pharmacology , Food Storage/methods , Fruit/microbiology , Fruit/chemistry , Food Preservation/methods , Color
14.
J Food Sci ; 89(10): 6481-6493, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39289791

ABSTRACT

The goal of this study was to create a fermented probiotic fruit puree for lactose-intolerant people, vegetarians, and infants over 6 months old. Fermented fruit purees were developed using apples, peaches, and bananas with lactic acid bacteria (LAB) strains: Lactobacillus plantarum subsp. plantarum (S5), Lactobacillus fermentum strain w8 (S10), and Lactobacillus pentosus strain ml104 (S14). Different fruit puree formulations were produced using three strains, two inoculation ratios (4% and 5%), and two fermentation durations (24  and 48 h). The physicochemical parameters (pH, total soluble solids, and color), total phenols content (TPC), total antioxidant capacity, bacterial viability, volatile aroma profile (VAP), and individual phenolic compound profile of fruit puree fermented for both 24  and 48 h were compared with the unfermented (control) purees. The results of VAP were evaluated via PROMETHEE and cluster analysis. Time of fermentation and bacterial cultures at varied concentrations improved color values of samples (L*, a*, and b*) compared to controls. The level of bioactive compounds in several samples (S10 and S14) decreased after fermentation in contrast to S5 samples. The bacterial population in the samples ranged from ∼7.00 to 9.50 log CFU/g after 48-h fermentation. The fruit puree samples exhibited the presence of two different phenolic compounds and a total of 17 distinct volatile aroma compounds. The control sample scored highest for aromatic components in PROMETHEE, while S14-II was the most unique sample in cluster analysis. In conclusion, fermented probiotic fruit puree shown high promise as a carrier for live probiotics, and the fermentation process boosted the nutritional content of the fruit puree.


Subject(s)
Fermentation , Fruit , Lactic Acid , Phenols , Probiotics , Fruit/microbiology , Fruit/chemistry , Lactic Acid/metabolism , Lactic Acid/analysis , Phenols/analysis , Phenols/metabolism , Volatile Organic Compounds/analysis , Lactobacillus plantarum/metabolism , Food Microbiology , Antioxidants/analysis , Antioxidants/metabolism , Cluster Analysis , Odorants/analysis , Color , Fermented Foods/microbiology , Fermented Foods/analysis
15.
J Appl Microbiol ; 135(9)2024 Sep 02.
Article in English | MEDLINE | ID: mdl-39264048

ABSTRACT

AIM: This study reports the presence of carbapenem-resistant Escherichia coli hybrid pathovars and its prevalence in 200 fresh-cut fruits from Accra. METHODS AND RESULTS: Standard culture methods were used to quantify microbial indicators and E. coli on fresh-cut fruits retailed in formal and informal outlets in Accra. The Kirby-Bauer disc diffusion method was used to determine the antibiotic resistance profile of E. coli, while multiplex PCR was employed to identify the virulence and carbapenem-resistance genes. Escherichia coli prevalence in cut fruits was 17%, with pawpaw, watermelon, and mixed fruit having higher prevalence than pineapple. Of the 34 E. coli isolates from fresh-cut fruits, 44% showed broad resistance to beta-lactam antibiotics, while 5.9% showed carbapenem resistance. The study identified virulence genes associated with all E. coli isolates, including stx1, stx2, escV, and ipaH, of which 97% were hybrid pathovars bearing genes for Shiga toxin-producing E. coli/enteropathogenic E. coli/enteroinvasive E. coli. The carbapenemase gene, blaIMP, was associated with both carbapenem-resistant E. coli phenotypes identified. CONCLUSION: Despite a low-carbapenem-resistance prevalence observed among E. coli isolates, hypervirulent hybrid strains of E. coli is present in fresh-cut fruits in the sampling area, posing a potential public health risk to fresh-cut fruit consumers.


Subject(s)
Anti-Bacterial Agents , Carbapenems , Escherichia coli , Fruit , Fruit/microbiology , Escherichia coli/genetics , Escherichia coli/drug effects , Escherichia coli/isolation & purification , Carbapenems/pharmacology , Anti-Bacterial Agents/pharmacology , Ghana/epidemiology , Food Microbiology , Microbial Sensitivity Tests , Virulence/genetics , Drug Resistance, Bacterial/genetics
16.
J Agric Food Chem ; 72(38): 20892-20904, 2024 Sep 25.
Article in English | MEDLINE | ID: mdl-39255954

ABSTRACT

Apple ring rot, caused by the pathogenic fungus Botryosphaeria dothidea, has inflicted substantial economic losses and caused significant food safety concerns. In this study, a pimarane-type diterpenoid, diaporthein B (DTB), isolated from a marine-derived fungus, exhibited significant antifungal activity against B. dothidea, with an EC50 value of 8.8 µg/mL. Transcriptome, metabolome, and physiological assays revealed that DTB may target mitochondria and disrupt the tricarboxylic acid (TCA) cycle and oxidative phosphorylation processes. This interference led to increased accumulation of reactive oxygen species and subsequent lipid peroxidation, ultimately inhibiting fungal growth. Furthermore, DTB exhibited an inhibitory potency against apple ring rot at a concentration of 31.2 µg/mL, achieving rates ranging from 67.7 to 81.6% across four distinct apple cultivars. These results indicated that DTB could serve as a novel fungicide for controlling apple ring rot in apple cultivation, transportation, and storage.


Subject(s)
Ascomycota , Fungicides, Industrial , Malus , Plant Diseases , Malus/microbiology , Malus/chemistry , Plant Diseases/microbiology , Plant Diseases/prevention & control , Ascomycota/drug effects , Fungicides, Industrial/pharmacology , Fungicides, Industrial/chemistry , Diterpenes/pharmacology , Diterpenes/chemistry , Fruit/microbiology , Fruit/chemistry
17.
J Agric Food Chem ; 72(39): 21574-21584, 2024 Oct 02.
Article in English | MEDLINE | ID: mdl-39303019

ABSTRACT

To develop novel fungicides for controlling postharvest fungal diseases in citrus fruits, 12 essential oil (EO)-based thiosemicarbazones compounds, termed hydrazine-carbothioamide, were prepared according to the condensation method. In vitro assays showed that compound 13j exhibited the strongest antifungal activity (minimum inhibitory concentration [MIC] = minimum fungicidal concentration [MFC] = 0.0125 mg/mL) against Penicillium digitatum. An in vivo study revealed that 5 × MFC of compound 13j can effectively mitigate the green mold incidence of citrus fruit inoculated with P. digitatum, as well as fruit rot during natural storage, at a level comparable to that of the chemical fungicide prochloraz. Throughout this process, fruit quality was maintained. The hemolysis assay showed that these thiosemicarbazone compounds have good biocompatibility and that their safety is comparable to that of prochloraz. The antifungal activity of compound 13j was attributed to membrane damage, as confirmed using scanning electron microscopy (SEM), Calcofluor white (CFW) staining, propidium iodide (PI) staining, Fourier transform-infrared (FT-IR) spectroscopy, optical density (OD)260, and relative conductivity assays. Collectively, our results indicate that compound 13j can be used as an antifungal agent to control the postharvest decay of citrus fruits.


Subject(s)
Citrus , Fruit , Fungicides, Industrial , Microbial Sensitivity Tests , Oils, Volatile , Penicillium , Plant Diseases , Thiosemicarbazones , Fungicides, Industrial/pharmacology , Fungicides, Industrial/chemistry , Citrus/chemistry , Citrus/microbiology , Oils, Volatile/pharmacology , Oils, Volatile/chemistry , Plant Diseases/microbiology , Plant Diseases/prevention & control , Fruit/chemistry , Fruit/microbiology , Penicillium/drug effects , Penicillium/metabolism , Thiosemicarbazones/pharmacology , Thiosemicarbazones/chemistry
18.
Int J Biol Macromol ; 279(Pt 3): 135350, 2024 Nov.
Article in English | MEDLINE | ID: mdl-39242007

ABSTRACT

In plant-pathogen interactions, numerous pathogens secrete polygalacturonase (PG) to degrade plants cell walls, whereas plants produce PG-inhibiting protein (PGIP) that specifically binds to pathogen-derived PG to inhibit its activity and resist pathogen infection. In the present study, we dshowed that PpPGIP1 was significantly upregulated in peaches after Monilinia fructicola infection, and the prokaryotic expression of the PpPGIP1 protein inhibited M. fructicola by mitigating its PG activity. Transient overexpression of PpPGIP1 in peaches significantly enhanced their resistance to M. fructicola. PpPGIP1 promoter had several W-box the defense elements that can bind to WRKY transcription factors. Transcriptome analysis identified 20 differentially expressed WRKY genes, including the classic disease resistance gene WRKY33. PpWRKY33 is significantly upregulated in M. fructicola infected peaches. PpWRKY33 is localized in the nucleus and can bind to the W-box in the PpPGIP1 promoter to transcriptional activate the expression of PpPGIP1. Transient overexpression PpWRKY33 upregulated PpPGIP1 expression in peaches, and silencing PpWRKY33 decreased the PpPGIP1 expression. These results indicated that PpPGIP1 positively regulates fungal disease resistance in peaches and is transcriptionally activated by PpWRKY33. These findings reveal the disease resistant role of PpPGIP1 in peaches, and provide new insights into its transcriptional regulation.


Subject(s)
Ascomycota , Disease Resistance , Gene Expression Regulation, Plant , Plant Diseases , Plant Proteins , Promoter Regions, Genetic , Prunus persica , Transcription Factors , Plant Diseases/microbiology , Plant Diseases/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Disease Resistance/genetics , Prunus persica/microbiology , Prunus persica/genetics , Transcription Factors/genetics , Transcription Factors/metabolism , Ascomycota/pathogenicity , Promoter Regions, Genetic/genetics , Fruit/microbiology , Fruit/genetics , Polygalacturonase/genetics , Polygalacturonase/metabolism
19.
J Agric Food Chem ; 72(40): 22132-22143, 2024 Oct 09.
Article in English | MEDLINE | ID: mdl-39316703

ABSTRACT

Banana anthracnose, caused by Colletotrichum fructicola, significantly reduced the postharvest fruit quality. Employing biocontrol strategies offers a sustainable approach to enhance agricultural practices. The Burkholderia sp. strain BX1 hinders the growth and appressorium formation of C. fructicola, and its sterile filtrate lowers the anthracnose incidence while preserving the fruit quality. Scanning electron microscopy and genomic analyses confirmed BX1 as Burkholderia pyrrocinia. AntiSMASH analysis identified three siderophores with high similarity, and improved MALDI-TOF IMS confirmed the presence of the siderophore pyochelin. Furthermore, the BX1 filtrate suppressed the expression of virulence genes in C. fructicola and induced the expression of disease resistance genes in banana. However, the presence of 80 µM iron ions notably mitigated BX1's inhibitory effects and reversed the changes in related gene expression. These results underscore BX1's robust efficacy as a biocontrol agent in managing banana anthracnose, highlight the effective antifungal compounds, and elucidate the influence of environmental factors on biocontrol effectiveness.


Subject(s)
Colletotrichum , Fruit , Musa , Plant Diseases , Siderophores , Musa/microbiology , Colletotrichum/physiology , Plant Diseases/microbiology , Plant Diseases/prevention & control , Fruit/microbiology , Siderophores/metabolism , Burkholderia/genetics , Burkholderia/metabolism , Burkholderia/physiology , Biological Control Agents/pharmacology
20.
Environ Microbiol Rep ; 16(5): e13275, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39228346

ABSTRACT

Olive anthracnose induced by different Colletotrichum species causes dramatic losses of fruit yield and oil quality. The increasing incidence of Colletotrichum fioriniae (Colletotrichum acutatum species complex) as causal agent of olive anthracnose in Italy, is endorsing new studies on its biology, ecology, and environmental factors such as temperature. Five isolates from different sampling sites in Lazio region (Central Italy) were studied under controlled laboratory conditions aiming to better understand the differences of thermal development among the isolates and to lay the foundations of a future mathematical model able to describe the key aspects of the pathogen's life cycle. The mycelial growth rate and the conidial germination rate were assessed at seven different constant temperatures (5, 10, 15, 20, 25, 30, and 35°C) and fixed relative humidity (100% RH). The obtained dataset was analysed to estimate the parameters of mathematical functions that connect the mycelial growth rate and the spore germination with the environmental temperature. The parameters set provided as the result of this study constitute a key step forward in the biological knowledge of the species and the basis for future formulations of mathematical models that might be the core of decision support systems in an integrated pest management framework.


Subject(s)
Colletotrichum , Olea , Plant Diseases , Spores, Fungal , Temperature , Colletotrichum/growth & development , Olea/microbiology , Plant Diseases/microbiology , Spores, Fungal/growth & development , Italy , Mycelium/growth & development , Fruit/microbiology
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