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1.
Mikrochim Acta ; 191(8): 454, 2024 Jul 08.
Article in English | MEDLINE | ID: mdl-38976069

ABSTRACT

An intelligent colorimetric sensing platform integrated with in situ immunomagnetic separation function was developed for ultrasensitive detection of Escherichia coli O157: H7 (E. coli O157: H7) in food. Captured antibody modified magnetic nanoparticles (cMNPs) and detection antibody/horseradish peroxidase (HRP) co-functionalized AuNPs (dHAuNPs) were firstly synthesized for targeted enrichment and colorimetric assay of E. coli O157: H7, in which remarkable signal amplification was realized by loading large amounts of HRP on the surface of AuNPs. Coupling with the optical collimation attachments and embedded magnetic separation module, a highly integrated optical device was constructed, by which in situ magnetic separation and high-quality imaging of 96-well microplates containing E. coli O157: H7 was achieved with a smartphone. The concentration of E. coli O157: H7 could be achieved in one-step by performing digital image colorimetric analysis of the obtained image with a custom-designed app. This biosensor possesses high sensitivity (1.63 CFU/mL), short detecting time (3 h), and good anti-interference performance even in real-sample testing. Overall, the developed method is expected to be a novel field detection platform for foodborne pathogens in water and food as well as for the diagnosis of infections due to its portability, ease of operation, and high feasibility.


Subject(s)
Biosensing Techniques , Colorimetry , Escherichia coli O157 , Food Microbiology , Gold , Horseradish Peroxidase , Immunomagnetic Separation , Metal Nanoparticles , Escherichia coli O157/isolation & purification , Colorimetry/methods , Gold/chemistry , Horseradish Peroxidase/chemistry , Immunomagnetic Separation/methods , Biosensing Techniques/methods , Metal Nanoparticles/chemistry , Food Contamination/analysis , Limit of Detection , Smartphone , Antibodies, Immobilized/immunology , Antibodies, Immobilized/chemistry , Magnetite Nanoparticles/chemistry
2.
ACS Appl Mater Interfaces ; 16(26): 33235-33245, 2024 Jul 03.
Article in English | MEDLINE | ID: mdl-38885355

ABSTRACT

Enhancing the stability of multienzyme cascade reactions in metal-organic frameworks (MOFs) is a challenging task in the fields of biotechnology and chemistry. However, addressing this challenge could yield far-reaching benefits across the application range in the biomedical, food, and environmental sectors. In this study, multienzyme partitioning immobilization that sequentially immobilizes cascade enzymes with hierarchical MOFs is proposed to reduce substrate diffusion resistance. Conversion results of ginsenosides indicate that this strategy improves the cascade efficiency up to 1.26 times. The substrate diffusion model is used to investigate the dual-interenzyme mass transfer behavior of substrates in the restricted domain space and evaluate the substrate channeling effect under partitioning immobilization. Molecular docking and kinetic simulations reveal that the MOFs effectively limit the conformational changes of cascade enzymes at high temperatures and in organic solvents while maintaining a large pocket of active centers. This phenomenon increased efficient substrate docking to the enzyme molecules, further optimizing cascade efficiency. The results of the immobilization of GOX and horseradish peroxidase as model enzymes indicate that the partitioned MOF immobilization strategy could be used for universal adaptation of cascade enzymes.


Subject(s)
Enzymes, Immobilized , Horseradish Peroxidase , Metal-Organic Frameworks , Molecular Docking Simulation , Metal-Organic Frameworks/chemistry , Enzymes, Immobilized/chemistry , Enzymes, Immobilized/metabolism , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism , Kinetics , Ginsenosides/chemistry , Ginsenosides/metabolism , Enzyme Stability
3.
J Colloid Interface Sci ; 672: 97-106, 2024 Oct 15.
Article in English | MEDLINE | ID: mdl-38833738

ABSTRACT

Formate is an important environmental pollutant, and meanwhile its concentration change is associated with a variety of diseases. Thus, rapid and sensitive detection of formate is critical for the biochemical analysis of complex samples and clinical diagnosis of multiple diseases. Herein, a colorimetric biosensor was constructed based on the cascade catalysis of formate oxidase (FOx) and horseradish peroxidase (HRP). These two enzymes were co-immobilized in Cu3(PO4)2-based hybrid nanoflower with spatial localization, in which FOx and HRP were located in the shell and core of nanoflower, respectively (FOx@HRP). In this system, FOx could catalyze the oxidation of formate to generate H2O2, which was then utilized by HRP to oxidize 2,2'-azino-bis-3-ethylbenzothiazoline-6-sulphonic acid to yield blue product. Ideal linear correlation could be obtained between the absorbance at 420 nm and formate concentration. Meanwhile, FOx@HRP exhibited excellent detection performance with low limit of detection (6 µM), wide linear detection range (10-900 µM), and favorable specificity, stability and reusability. Moreover, it could be applied in the detection of formate in environmental, food and biological samples with high accuracy. Collectively, FOx@HRP provides a useful strategy for the simple and sensitive detection of formate and is potentially to be used in biochemical analysis and clinical diagnosis.


Subject(s)
Colorimetry , Enzymes, Immobilized , Formates , Horseradish Peroxidase , Colorimetry/methods , Formates/chemistry , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism , Enzymes, Immobilized/chemistry , Enzymes, Immobilized/metabolism , Biosensing Techniques/methods , Limit of Detection , Nanostructures/chemistry , Particle Size , Surface Properties
4.
J Mater Chem B ; 12(26): 6342-6350, 2024 Jul 03.
Article in English | MEDLINE | ID: mdl-38856318

ABSTRACT

The enzyme-linked immunosorbent assay (ELISA) remains the prevailing method for quantifying protein biomarkers. Enzymatic signal generation and amplification are key mechanisms that govern its analytical performance. This study reports the synthesis and application of microscale metal-organic framework (MOF)/enzyme composite particles as a novel detection probe to substantially enhance the sensitivity of ELISA. An optimal one-pot approach was established to incorporate a substantial amount of streptavidin-horseradish peroxidase (SA-HRP) either within or on the surface of the metal-azolate framework (MAF-7) microparticles. This approach enables the labeling of a single sandwich antibody-antigen complex with numerous enzymes, which markedly amplifies the enzymatic colorimetric signal generation. Moreover, MAF-7 caging was found to enhance the reactivity of the caged HRP enzyme, further promoting the overall detection sensitivity of ELISA. Compared to other developments that are often associated with more complicated detection modalities, our method is compatible with standard immunoassays and commonly used photometrical signal detection. The implementation of this strategy in the detection of CD147 results in a remarkably low limit of detection of 2.8 fg mL-1, representing a 105-fold improvement compared to that obtained with the standard ELISA. Moreover, the heightened sensitivity of this technique renders it particularly suitable for diagnosing breast cancer, thus presenting a promising tool for the early detection of the disease in clinical settings.


Subject(s)
Enzyme-Linked Immunosorbent Assay , Extracellular Vesicles , Metal-Organic Frameworks , Metal-Organic Frameworks/chemistry , Humans , Extracellular Vesicles/chemistry , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism , Particle Size , Surface Properties , Biomarkers, Tumor/analysis , Biomarkers/analysis , Limit of Detection
5.
Int J Biol Macromol ; 273(Pt 2): 133180, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38880453

ABSTRACT

Surface chemistry of carriers plays a key role in enzyme loading capacity, structure rigidity, and thus catalyze activity of immobilized enzymes. In this work, the two model enzymes of horseradish peroxidase (HRP) and glucose oxidase (GOx) are co-immobilized on the lysozyme functionalized magnetic core-shell nanocomposites (LYZ@MCSNCs) to enhance their stability and activity. Briefly, the HRP and GOx aggregates are firstly formed under the crosslinker of trimesic acid, in which the loading amount and the rigidity of the enzyme can be further increased. Additionally, LYZ easily forms a robust anti-biofouling nanofilm on the surface of SiO2@Fe3O4 magnetic nanoparticles with abundant functional groups, which facilitate chemical crosslinking of HRP and GOx aggregates with minimized inactivation. The immobilized enzyme of HRP-GOx@LYZ@MCSNCs exhibited excellent recovery activity (95.6 %) higher than that of the free enzyme (HRP&GOx). Specifically, 85 % of relative activity was retained after seven cycles, while 73.5 % of initial activity was also remained after storage for 33 days at 4 °C. The thermal stability and pH adaptability of HRP-GOx@LYZ@MCSNCs were better than those of free enzyme of HRP&GOx. This study provides a mild and ecofriendly strategy for multienzyme co-immobilization based on LYZ functionalized magnetic nanoparticles using HRP and GOx as model enzymes.


Subject(s)
Enzyme Stability , Enzymes, Immobilized , Glucose Oxidase , Horseradish Peroxidase , Magnetite Nanoparticles , Muramidase , Enzymes, Immobilized/chemistry , Enzymes, Immobilized/metabolism , Muramidase/chemistry , Muramidase/metabolism , Magnetite Nanoparticles/chemistry , Glucose Oxidase/chemistry , Glucose Oxidase/metabolism , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism , Hydrogen-Ion Concentration , Temperature , Cross-Linking Reagents/chemistry , Protein Aggregates , Silicon Dioxide/chemistry
6.
Mikrochim Acta ; 191(7): 369, 2024 06 04.
Article in English | MEDLINE | ID: mdl-38834823

ABSTRACT

A trendsetting direct competitive-based biosensing tool has been developed and implemented for the determination of the polyunsaturated fatty acid arachidonic acid (ARA), a highly significant biological regulator with decisive roles in viral infections. The designed methodology involves a competitive reaction between the target endogenous ARA and a biotin-ARA competitor for the recognition sites of anti-ARA antibodies covalently attached to the surface of carboxylic acid-coated magnetic microbeads (HOOC-MµBs), followed by the enzymatic label of the biotin-ARA residues with streptavidin-horseradish peroxidase (Strep-HRP) conjugate. The resulting bioconjugates were magnetically trapped onto the sensing surface of disposable screen-printed carbon transducers (SPCEs) to monitor the extent of the biorecognition reaction through amperometry. The operational functioning of the exhaustively optimized and characterized immunosensing bioplatform was highly convenient for the quantitative determination of ARA in serum samples from severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2-) and respiratory syncytial virus (RSV)-infected individuals in a rapid, affordable, trustful, and sensitive manner.


Subject(s)
Arachidonic Acid , Biosensing Techniques , COVID-19 , SARS-CoV-2 , Humans , Arachidonic Acid/blood , COVID-19/blood , COVID-19/diagnosis , COVID-19/immunology , Biosensing Techniques/methods , SARS-CoV-2/immunology , Horseradish Peroxidase/chemistry , Respiratory Syncytial Viruses/immunology , Immunoassay/methods , Streptavidin/chemistry , Biotin/chemistry , Limit of Detection
7.
Mikrochim Acta ; 191(7): 364, 2024 06 03.
Article in English | MEDLINE | ID: mdl-38831034

ABSTRACT

CdIn2S4 and zinc tetrakis(4-carboxyphenyl)porphyrin (ZnTCPP) were synthesized by hydrothermal method, and an organic dye-sensitized inorganic semiconductor ZnTCPP/CdIn2S4 type II heterojunction was constructed on a fluorine-doped tin oxide (FTO) substrate electrode. A sandwich immunostructure for signal-attenuation photoelectrochemical (PEC) detection of cardiac troponin I (cTnI) was constructed using the ZnTCPP/CdIn2S4/FTO photoanode and a horseradish peroxidase (HRP)-ZnFe2O4-Ab2-bovine serum albumin (BSA) immunolabeling complex. The bioenzyme HRP and the HRP-like nanozyme ZnFe2O4 can co-catalyze the oxidation of 4-chloro-1-naphthol (4-CN) by H2O2 to produce an insoluble precipitate on the photoanode, thus notably reducing the anodic photocurrent for quantitative determination of cTnI. Under the optimal conditions, the photocurrent at 0 V vs. SCE in 0.1 M phosphate buffer solution (pH 7.40) containing 0.1 M ascorbic acid was linear with the logarithm of cTnI concentration from 500 fg mL-1 to 50.0 ng mL-1, and the limit of detection (LOD, S/N = 3) is 0.15 pg mL-1. Spiked recoveries were 95.1% ~ 104% for assay of cTnI in human serum samples.


Subject(s)
Electrochemical Techniques , Limit of Detection , Tin Compounds , Troponin I , Troponin I/blood , Humans , Electrochemical Techniques/methods , Immunoassay/methods , Tin Compounds/chemistry , Catalysis , Horseradish Peroxidase/chemistry , Naphthols/chemistry , Metalloporphyrins/chemistry , Electrodes , Hydrogen Peroxide/chemistry , Serum Albumin, Bovine/chemistry , Photochemical Processes , Animals , Biosensing Techniques/methods , Semiconductors , Cattle , Sulfides/chemistry , Porphyrins/chemistry
8.
Anal Chem ; 96(24): 10064-10073, 2024 Jun 18.
Article in English | MEDLINE | ID: mdl-38842443

ABSTRACT

The global spread of monkeypox has become a worldwide public healthcare issue. Therefore, there is an urgent need for accurate and sensitive detection methods to effectively control its spreading. Herein, we screened by phage display two peptides M4 (sequence: DPCGERICSIAL) and M6 (sequence: SCSSFLCSLKVG) with good affinity and specificity to monkeypox virus (MPXV) B21R protein. To simulate the state of the peptide in the phage and to avoid spatial obstacles of the peptide, GGGSK was added at the C terminus of M4 and named as M4a. Molecular docking shows that peptide M4a and peptide M6 are bound to different epitopes of B21R by hydrogen bonds and salt-bridge interactions, respectively. Then, peptide M4a was selected as the capture probe, phage M6 as the detection probe, and carbonized polymer dots (CPDs) as the fluorescent probe, and a colorimetric and fluorescent double-signal capture peptide/antigen/signal peptide-displayed phage sandwich ELISA triggered by horseradish peroxidase (HRP) through a simple internal filtration effect (IFE) was constructed. HRP catalyzes H2O2 to oxidize 3,3',5,5'-tetramethylbenzidine (TMB) to generate blue oxidized TMB, which can further quench the fluorescence of CPDs through IFE, enabling to detect MPXV B21R in colorimetric and fluorescent modes. The proposed simple immunoassay platform shows good sensitivity and reliability in MPXV B21R detection. The limit of detection for colorimetric and fluorescent modes was 27.8 and 9.14 pg/mL MPXV B21R, respectively. Thus, the established double-peptide sandwich-based dual-signal immunoassay provides guidance for the development of reliable and sensitive antigen detection capable of mutual confirmation, which also has great potential for exploring various analytical strategies for other respiratory virus surveillance.


Subject(s)
Enzyme-Linked Immunosorbent Assay , Peptides , Enzyme-Linked Immunosorbent Assay/methods , Peptides/chemistry , Antigens, Viral/immunology , Antigens, Viral/analysis , Antigens, Viral/chemistry , Molecular Docking Simulation , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism , Limit of Detection , Fluorescent Dyes/chemistry , Peptide Library , Benzidines/chemistry , Colorimetry/methods
9.
Biosensors (Basel) ; 14(6)2024 May 29.
Article in English | MEDLINE | ID: mdl-38920582

ABSTRACT

Glucosamine-chitosan synthesized by the Maillard reaction was combined with montmorillonite to obtain a nanohybrid composite to immobilize horseradish peroxidase. The material combines the advantageous properties of clay with those of the chitosan derivative; has improved water solubility and reduced molecular weight and viscosity; involves an eco-friendly synthesis; and exhibits ion exchange capacity, good adhesiveness, and a large specific surface area for enzyme adsorption. The physicochemical characteristics of the composite were analyzed by infrared spectroscopy and X-ray diffraction to determine clay-polycation interactions. The electrochemical response of the different polyphenols to glassy carbon electrodes modified with the composite was evaluated by cyclic voltammetry. The sensitivity and detection limit values obtained with the biosensor toward hydroquinone, chlorogenic acid, catechol, and resorcinol are (1.6 ± 0.2) × 102 µA mM-1 and (74 ± 8) nM; (1.2 ± 0.1) × 102 µA mM-1 and (26 ± 3) nM; (16 ± 2) µA mM-1 and (0.74 ± 0.09) µM; and (3.7± 0.3) µA mM-1 and (3.3 ± 0.2) µM, respectively. The biosensor was applied to quantify polyphenols in pennyroyal and lemon verbena extracts.


Subject(s)
Bentonite , Biosensing Techniques , Chitosan , Electrochemical Techniques , Enzymes, Immobilized , Glucosamine , Horseradish Peroxidase , Polyphenols , Bentonite/chemistry , Polyphenols/analysis , Chitosan/chemistry , Horseradish Peroxidase/chemistry , Enzymes, Immobilized/chemistry , Glucosamine/analysis , Electrodes
10.
Anal Chem ; 96(26): 10630-10638, 2024 Jul 02.
Article in English | MEDLINE | ID: mdl-38912708

ABSTRACT

Paper-based lateral flow immunoassays (LFIAs) are cost-effective, portable, and simple methods for detection of diverse analytes, which however only provide qualitative or semiquantitative results and lack sufficient sensitivity. A combination of LFIA and electrochemical detection, namely, electrochemical lateral flow immunoassay (eLFIA), enables quantitative detection of analytes with high sensitivity, but the integration of external electrodes makes the system relatively expensive and unstable. Herein, the working, counter, and reference electrodes were prepared directly on the nitrocellulose membrane using screen printing, which remarkably simplified the structure of eLFIA and decreased the cost. Moreover, a horseradish peroxidase (HRP)-based electrochemical signal amplification strategy was used for further increasing the analytical sensitivity. HRP captured on the working electrode can catalyze the oxidation of tetramethylbenzidine (TMB) to form the TMB-TMBox precipitate on the electrode surface, which as an electrochemically active product can output an amplified current for quantification. We demonstrated that the eLFIA could detect low-abundant inflammatory biomarkers in human plasma samples with limits of detection of 0.17 and 0.54 pg mL-1 for interleukin-6 and C-reactive protein, respectively. Finally, a fully portable system was fabricated by integrating eLFIA with a flexible and wireless electrochemical workstation, realizing the point-of-care detection of interleukin-6.


Subject(s)
Biomarkers , C-Reactive Protein , Electrochemical Techniques , Electrodes , Interleukin-6 , Humans , Immunoassay/methods , Immunoassay/instrumentation , Electrochemical Techniques/instrumentation , Biomarkers/blood , Biomarkers/analysis , Interleukin-6/blood , Interleukin-6/analysis , C-Reactive Protein/analysis , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism , Limit of Detection , Inflammation/blood , Inflammation/diagnosis , Benzidines
11.
Biosens Bioelectron ; 260: 116434, 2024 Sep 15.
Article in English | MEDLINE | ID: mdl-38810414

ABSTRACT

Aptamer-based electrochemical sensors are frequently used as independent, surface-functionalized, passive electrodes. However, their sensitivity and detection limits become limited, particularly when the electrode area is reduced to facilitate miniaturization. A mobile phone-based microfluidic electrochemical aptamer sensing platform for 3,3',4,4'-tetrachlorobiphenyl (PCB77) detection was developed in this work. This aptamer sensor utilized Exonuclease I (Exo I) and DNA/AuNPs/horseradish peroxidase (DNA/AuNPs/HRP) nanoprobes as a merged signal amplification method, which resulted in an increase in the electrochemical sensing performance. Sensitive detection of PCB77 was accomplished by functionalizing the hierarchically structured Au@MoS2/CNTs/GO modified working/sensing electrode with the specific aptamer. The aptamer sensor was tested with different concentrations of PCB77 within the microfluidic platform. Afterward, the differential pulse voltammograms were recorded using a wireless integrated circuit device. Subsequently, the collected data was transmitted to a smartphone using Bluetooth communication. A detection limit of 0.0085 ng/L was obtained for PCB77 detection, with a detection range from 0.1 to 1000 ng/L. In addition, the detection of PCB77 in spiked water samples validated the possibility of using this aptamer sensor in a real environment, and the aptamer sensor demonstrated high selectivity in distinguishing PCB77 from other potential interfering species. The merging of electrochemical aptamer sensors with purposefully engineered microfluidic and integrated devices in this study is a novel and promising method that provides a dependable platform for on-site applications.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , Electrochemical Techniques , Gold , Limit of Detection , Metal Nanoparticles , Polychlorinated Biphenyls , Aptamers, Nucleotide/chemistry , Biosensing Techniques/instrumentation , Polychlorinated Biphenyls/analysis , Gold/chemistry , Metal Nanoparticles/chemistry , Exodeoxyribonucleases/chemistry , Horseradish Peroxidase/chemistry , Nanotubes, Carbon/chemistry , Molybdenum/chemistry , Equipment Design , Water Pollutants, Chemical/analysis , DNA/chemistry , Smartphone
12.
Biomacromolecules ; 25(6): 3620-3627, 2024 Jun 10.
Article in English | MEDLINE | ID: mdl-38806062

ABSTRACT

Lignin is an aromatic polymer that constitutes plant cell walls. The polymerization of lignin proceeds by radical coupling, and this process requires radicalization of the phenolic end of lignin by enzymes. However, due to the steric hindrance between enzymes, lignin, and polysaccharides, the direct oxidation of the phenolic end of lignin by the enzyme would be difficult, and the details of the growth of lignin are still unknown. In this study, enzymatic dehydrogenative polymerization experiments were conducted using coniferyl alcohol (CA) and the deuterium-labeled lignin model compound (D-LM) under a noncontact condition in which horseradish peroxidase cannot directly oxidize D-LM due to separation by a dialysis membrane. Analysis of deuterium-labeled degraded compounds obtained by a combination of methylation and thioacidolysis revealed the formation of the bond between the phenolic end of D-LM and CA, suggesting that membrane-permeable, low-molecular-weight lignols functioned as a redox shuttle mediator.


Subject(s)
Lignin , Oxidation-Reduction , Polymerization , Lignin/chemistry , Lignin/metabolism , Phenols/chemistry , Phenols/metabolism , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism , Molecular Weight , Phenylpropionates/chemistry , Phenylpropionates/metabolism
13.
ACS Appl Bio Mater ; 7(5): 3506-3514, 2024 05 20.
Article in English | MEDLINE | ID: mdl-38696441

ABSTRACT

Horseradish peroxidase (HRP)-mediated hydrogelation, caused by the cross-linking of phenolic groups in polymers in the presence of hydrogen peroxide (H2O2), is an effective route for bioink solidification in 3D bioprinting. Sugar beet pectin (SBP) naturally has cross-linkable phenols through the enzymatic reaction. Therefore, chemical modifications are not required, unlike the various polymers that have been used in the enzymatic cross-linking system. In this study, we report the application of SBP in extrusion-based bioprinting including HRP-mediated bioink solidification. In this system, H2O2 necessary for the solidification of inks is supplied in the gas phase. Cell-laden liver lobule-like constructs could be fabricated using bioinks consisting of 10 U/mL HRP, 4.0 and 6.0 w/v% SBP, and 6.0 × 106 cells/mL human hepatoblastoma (HepG2) cells exposed to air containing 16 ppm of H2O2 concurrently during printing and 10 min postprinting. The HepG2 cells enclosed in the printed constructs maintained their viability, metabolic activity, and hepatic functions from day 1 to day 7 of the culture, which indicates the cytocompatibility of this system. Taken together, this result demonstrates the potential of SBP and HRP cross-linking systems for 3D bioprinting, which can be applied in tissue engineering applications.


Subject(s)
Beta vulgaris , Biocompatible Materials , Bioprinting , Horseradish Peroxidase , Materials Testing , Pectins , Printing, Three-Dimensional , Horseradish Peroxidase/metabolism , Horseradish Peroxidase/chemistry , Beta vulgaris/chemistry , Humans , Pectins/chemistry , Hep G2 Cells , Biocompatible Materials/chemistry , Biocompatible Materials/pharmacology , Biocompatible Materials/chemical synthesis , Hydrogen Peroxide/chemistry , Particle Size , Cell Survival/drug effects , Cross-Linking Reagents/chemistry , Cross-Linking Reagents/chemical synthesis , Tissue Engineering
14.
J Am Chem Soc ; 146(19): 13247-13257, 2024 May 15.
Article in English | MEDLINE | ID: mdl-38701006

ABSTRACT

Horseradish peroxidase (HRP) is an enzyme that oxidizes pollutants from wastewater. A previous report indicated that peroxidases can have an enhancement in initial enzymatic activity in an aqueous solution of 0.26 M 1-ethyl-3-methylimidazolium ethyl sulfate ([EMIm][EtSO4]) at neutral pH. However, the atomistic details remain elusive. In the enzymatic landscape of HRP, compound II (Cpd II) plays a key role and involves a histidine (H42) residue. Cpd II exists as oxoferryl (2a) or hydroxoferryl (2b(FeIV)) forms, where 2a is the predominantly observed form in experimental studies. Intriguingly, the ferric 2b(FeIII) form seen in synthetic complexes has not been observed in HRP. Here, we have investigated the structure and dynamics of HRP in pure water and aqueous [EMIm][EtSO4] (0.26 M), as well as the reaction mechanism of 2a to 2b conversion using polarizable molecular dynamics (MD) simulations and quantum mechanics/molecular mechanics (QM/MM) calculations. When HRP is solvated in aq [EMIm][EtSO4], the catalytic water displaces, and H42 directly orients over the ferryl moiety, allowing a direct proton transfer (PT) with a significant energy barrier reduction. Conversely, in neat water, the reaction of 2a to 2b follows the previously reported mechanism. We further investigated the deprotonated form of H42. Analysis of the electric fields at the active site indicates that the aq [EMIm][EtSO4] medium facilitates the reaction by providing a more favorable environment compared with the system solvated in neat water. Overall, the atomic level supports the previous experimental observations and underscores the importance of favorable electric fields in the active site to promote catalysis.


Subject(s)
Horseradish Peroxidase , Ionic Liquids , Molecular Dynamics Simulation , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism , Ionic Liquids/chemistry , Imidazoles/chemistry , Quantum Theory , Solutions , Water/chemistry
15.
Talanta ; 275: 126156, 2024 Aug 01.
Article in English | MEDLINE | ID: mdl-38692048

ABSTRACT

The development of simple methods for the isolation and quantification of exosomes in biological samples is important. By using the typical two-dimensional (2D) nanomaterials, graphene oxide (GO), the present work first studied the interaction of liposomes with the nanocomposites formed by adsorbing HRP on the GO surface and found the presence of liposomes led to the release of HRP from the GO surface to the solution phase triggering the luminol-H2O2 chemiluminescence (CL) reaction to emit light. Benefiting from the similarity of exosomes to liposomes in both composition and morphology aspects, the GO-HRP nanocomposites with a mass ratio of 120:1 and 160:1 were employed for the quantitative detection of exosomes in 100-fold diluted serum samples. The whole detection process took about 15 min and as low as 3.2 × 102 particles µL-1 of exosomes could be sensitively detected. In addition to GO-HRP nanocomposites, the CL responses of other nanocomposites obtained from adsorbing HRP on other 2D nanomaterials such as layered MoS2 for exosomes were also tested. MoS2-HRP exhibited similar behavior and the LODs for the detection of exosomes were 5.8 × 102 particles µL-1. The proposed assays were a biomarker-independent quantitative method that achieved the quantification of exosomes in serum samples directly without an isolation process.


Subject(s)
Exosomes , Graphite , Horseradish Peroxidase , Luminescent Measurements , Nanostructures , Exosomes/chemistry , Graphite/chemistry , Horseradish Peroxidase/chemistry , Luminescent Measurements/methods , Adsorption , Humans , Nanostructures/chemistry , Luminol/chemistry , Molybdenum/chemistry , Disulfides/chemistry , Hydrogen Peroxide/chemistry , Limit of Detection , Liposomes/chemistry , Nanocomposites/chemistry
16.
Sci Rep ; 14(1): 11442, 2024 05 20.
Article in English | MEDLINE | ID: mdl-38769440

ABSTRACT

The global supply of fluoropolymers and fluorinated solvents is decreasing due to environmental concerns regarding polyfluoroalkyl substances. CYTOP has been used for decades primarily as a component of a femtoliter chamber array for digital bioanalysis; however, its supply has recently become scarce, increasing the urgency of fabricating a femtoliter chamber array using alternative materials. In this study, we investigated the feasibility of fabricating a femtoliter chamber array using four types of fluoropolymers in stable supply as candidate substitutes and verified their applicability for digital bioanalysis. Among these candidates, Fluorine Sealant emerged as a viable option for fabricating femtoliter chamber arrays using a conventional photolithography process. To validate its efficacy, we performed various digital bioanalysis using FP-A-based chamber arrays with model enzymes such as CRISPR-Cas, horseradish peroxidase, and ß-galactosidase. The results demonstrated the similar performance to that of CYTOP, highlighting the broader utility of FP-A in digital bioanalysis. Our findings underscore the potential of FP-A to enhance the versatility of digital bioanalysis and foster the ongoing advancement of innovative diagnostic technologies.


Subject(s)
Polymers , Polymers/chemistry , Horseradish Peroxidase/metabolism , Horseradish Peroxidase/chemistry , beta-Galactosidase/metabolism
17.
Food Chem ; 453: 139623, 2024 Sep 30.
Article in English | MEDLINE | ID: mdl-38761730

ABSTRACT

Ochratoxin A (OTA) in food poses a serious challenge to public health. Herein, using the nanobody-driven controllable aggregation of gold nanoparticles (AuNPs) in a glucose oxidase-tyramine-horseradish peroxidase (GOx-TYR-HRP) system, we propose a direct competitive plasmonic enzyme immunoassay (dc-PEIA) for OTA detection. The OTA-GOx conjugate catalyzes glucose to produce hydrogen peroxide (H2O2), and then HRP catalyzes H2O2 to generate hydroxyl radical which induces the crosslink of TYR. Crosslinked TYR leads to aggregation of AuNPs through strong electrostatic interactions, which is tunable based on the competition of OTA-GOx and free OTA for binding the immobilized nanobody. The optimized dc-PEIA achieves an instrumental limit of detection (LOD) of 0.275 ng/mL and a visual LOD of 1.56 ng/mL. It exhibits good selectivity for OTA and accuracy in the analysis of pepper samples, with the confirmation of high-performance liquid chromatography. Overall, the dc-PEIA is demonstrated as a useful tool for detecting OTA in food.


Subject(s)
Capsicum , Food Contamination , Gold , Metal Nanoparticles , Ochratoxins , Ochratoxins/analysis , Gold/chemistry , Metal Nanoparticles/chemistry , Capsicum/chemistry , Capsicum/immunology , Food Contamination/analysis , Immunoenzyme Techniques/methods , Limit of Detection , Glucose Oxidase/chemistry , Single-Domain Antibodies/chemistry , Single-Domain Antibodies/immunology , Horseradish Peroxidase/chemistry , Biosensing Techniques
18.
Biomacromolecules ; 25(5): 3055-3062, 2024 May 13.
Article in English | MEDLINE | ID: mdl-38693874

ABSTRACT

Polymersomes, nanosized polymeric vesicles, have attracted significant interest in the areas of artificial cells and nanomedicine. Given their size, their visualization via confocal microscopy techniques is often achieved through the physical incorporation of fluorescent dyes, which however present challenges due to potential leaching. A promising alternative is the incorporation of molecules with aggregation-induced emission (AIE) behavior that are capable of fluorescing exclusively in their assembled state. Here, we report on the use of AIE polymersomes as artificial organelles, which are capable of undertaking enzymatic reactions in vitro. The ability of our polymersome-based artificial organelles to provide additional functionality to living cells was evaluated by encapsulating catalytic enzymes such as a combination of glucose oxidase/horseradish peroxidase (GOx/HRP) or ß-galactosidase (ß-gal). Via the additional incorporation of a pyridinium functionality, not only the cellular uptake is improved at low concentrations but also our platform's potential to specifically target mitochondria expands.


Subject(s)
Glucose Oxidase , Horseradish Peroxidase , beta-Galactosidase , Glucose Oxidase/chemistry , Humans , beta-Galactosidase/chemistry , beta-Galactosidase/metabolism , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism , Organelles/metabolism , Fluorescent Dyes/chemistry , Polymers/chemistry , Fluorescence , HeLa Cells , Mitochondria/metabolism
19.
Nano Lett ; 24(15): 4682-4690, 2024 Apr 17.
Article in English | MEDLINE | ID: mdl-38563501

ABSTRACT

Multienzyme assemblies mediated by multivalent interaction play a crucial role in cellular processes. However, the three-dimensional (3D) programming of an enzyme complex with defined enzyme activity in vitro remains unexplored, primarily owing to limitations in precisely controlling the spatial topological configuration. Herein, we introduce a nanoscale 3D enzyme assembly using a tetrahedral DNA framework (TDF), enabling the replication of spatial topological configuration and maintenance of an identical edge-to-edge distance akin to natural enzymes. Our results demonstrate that 3D nanoscale enzyme assemblies in both two-enzyme systems (glucose oxidase (GOx)/horseradish peroxidase (HRP)) and three-enzyme systems (amylglucosidase (AGO)/GOx/HRP) lead to enhanced cascade catalytic activity compared to the low-dimensional structure, resulting in ∼5.9- and ∼7.7-fold enhancements over homogeneous diffusional mixtures of free enzymes, respectively. Furthermore, we demonstrate the enzyme assemblies for the detection of the metabolism biomarkers creatinine and creatine, achieving a low limit of detection, high sensitivity, and broad detection range.


Subject(s)
Enzymes, Immobilized , Glucose Oxidase , Enzymes, Immobilized/chemistry , Horseradish Peroxidase/chemistry , Glucose Oxidase/chemistry , DNA/chemistry
20.
Small ; 20(23): e2309075, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38597772

ABSTRACT

The improper use and overuse of antibiotics have led to significant burdens and detrimental effects on the environment, food supply, and human health. Herein, a magnetic solid-phase extraction program and an optical immunosensor based on bimetallic Ce/Zr-UiO 66 for the detection of antibiotics are developed. A magnetic Fe3O4@SiO2@Ce/Zr-UiO 66 metal-organic framework (MOF) is prepared to extract and enrich chloramphenicol from fish, wastewater, and urine samples, and a horseradish peroxidase (HRP)-Ce/Zr-UiO 66@bovine serum protein-chloramphenicol probe is used for the sensitive detection of chloramphenicol based on the dual-effect catalysis of Ce and HRP. In this manner, the application of Ce/Zr-UiO 66 in integrating sample pretreatment and antibiotic detection is systematically investigated and the associated mechanisms are explored. It is concluded that Ce/Zr-UiO 66 is a versatile dual-track material exhibiting high enrichment efficiency (6.37 mg g-1) and high sensitivity (limit of detection of 51.3 pg mL-1) for chloramphenicol detection and serving as a multifunctional MOF for safeguarding public health and hygiene.


Subject(s)
Anti-Bacterial Agents , Chloramphenicol , Metal-Organic Frameworks , Metal-Organic Frameworks/chemistry , Chloramphenicol/analysis , Animals , Humans , Silicon Dioxide/chemistry , Cerium/chemistry , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism
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