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1.
Methods Mol Biol ; 2824: 409-424, 2024.
Article in English | MEDLINE | ID: mdl-39039427

ABSTRACT

Three-dimensional culture models of the brain enable the study of neuroinfection in the context of a complex interconnected cell matrix. Depending on the differentiation status of the neural cells, two models exist: 3D spheroids also called neurospheres and cerebral organoids. Here, we describe the preparation of 3D spheroids and cerebral organoids and give an outlook on their usage to study Rift Valley fever virus and other neurotropic viruses.


Subject(s)
Organoids , Spheroids, Cellular , Organoids/virology , Organoids/cytology , Spheroids, Cellular/virology , Humans , Animals , RNA Viruses/physiology , Brain/virology , Brain/cytology , RNA Virus Infections/virology , Cell Culture Techniques/methods , Cell Culture Techniques, Three Dimensional/methods
2.
Int J Mol Sci ; 25(14)2024 Jul 15.
Article in English | MEDLINE | ID: mdl-39062994

ABSTRACT

E3 ubiquitin ligases, key components of the ubiquitin proteasome system, orchestrate protein degradation through ubiquitylation and profoundly impact cellular biology. Small HERC E3 ligases (HERC3-6) have diverse functions in mammals, including roles in spermatogenesis, protein degradation, and immunity. Until now, only mammals' HERC3, HERC5, and HERC6 are known to participate in immune responses, with major involvement in the antiviral response. Interestingly, an exclusive HERC7 has been characterized in fish showing great molecular conservation and antiviral roles. Thus, this study identifies and characterizes the herc7 gene in the European sea bass teleost. The European sea bass herc7 gene and the putative protein show good conservation of the promoter binding sites for interferons and the RCC1 and HECT domains characteristic of HERC proteins, respectively. The phylogenetic analysis shows a unique cluster with the fish-exclusive HERC7 orthologues. During ontogeny, the herc7 gene is expressed from 3 days post-fertilization onwards, being constitutively and widely distributed in adult tissues. In vitro, stimulated leucocytes up-regulate the herc7 gene in response to mitogens and viruses, pointing to a role in the immune response. Furthermore, sea bass herc7 expression is related to the interferon response intensity and viral load in different tissues upon in vivo infection with red-grouper betanodavirus (RGNNV), suggesting the potential involvement of fish HERC7 in ISGylation-based antiviral activity, similarly to mammalian HERC5. This study broadens the understanding of small HERC proteins in fish species and highlights HERC7 as a potential contributor to the immune response in European sea bass, with implications for antiviral defense mechanisms. Future research is needed to unravel the precise actions and functions of HERC7 in teleost fish immunity, providing insights into direct antiviral activity and viral evasion.


Subject(s)
Bass , Fish Diseases , Fish Proteins , Phylogeny , Ubiquitin-Protein Ligases , Animals , Bass/immunology , Bass/genetics , Bass/virology , Ubiquitin-Protein Ligases/genetics , Ubiquitin-Protein Ligases/metabolism , Fish Proteins/genetics , Fish Proteins/immunology , Fish Proteins/metabolism , Fish Diseases/virology , Fish Diseases/immunology , Fish Diseases/genetics , Nodaviridae , RNA Virus Infections/immunology , RNA Virus Infections/virology , RNA Virus Infections/genetics , RNA Virus Infections/veterinary
3.
Adv Virus Res ; 119: 39-61, 2024.
Article in English | MEDLINE | ID: mdl-38897708

ABSTRACT

RNA viruses are some of the most successful biological entities due their ability to adapt and evolve. Despite their small genome and parasitic nature, RNA viruses have evolved many mechanisms to ensure their survival and maintenance in the host population. We propose that one of these mechanisms of survival is the generation of nonstandard viral genomes (nsVGs) that accumulate during viral replication. NsVGs are often considered to be accidental defective byproducts of the RNA virus replication, but their ubiquity and the plethora of roles they have during infection indicate that they are an integral part of the virus life cycle. Here we review the different types of nsVGs and discuss how their multiple roles during infection could be beneficial for RNA viruses to be maintained in nature. By shifting our perspectives on what makes a virus successful, we posit that nsVG generation is a conserved phenomenon that arose during RNA virus evolution as an essential component of a healthy virus community.


Subject(s)
Evolution, Molecular , Genome, Viral , RNA Viruses , Virus Replication , RNA Viruses/genetics , RNA Viruses/physiology , Virus Replication/genetics , Humans , Animals , RNA, Viral/genetics , RNA Virus Infections/virology
4.
Virology ; 597: 110154, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38917693

ABSTRACT

To determine the pathogenicity of two different genotypes of avian hepatitis E strains in two species of birds, a total of thirty healthy 12-week-old birds were used. After inoculation, fecal virus shedding, viremia, seroconversion, serum alanine aminotransferase (ALT) increases and liver lesions were evaluated. The results revealed that CHN-GS-aHEV and CaHEV could both infect Hy-Line hens and silkie fowls, respectively. Compared to the original avian HEV strain, the cross-infected virus exhibited a delay of 2 weeks and 1 week in emerged seroconversion, viremia, fecal virus shedding, and increased ALT level, and also showed mild liver lesions. These findings suggested that CHN-GS-aHEV may have circulated in chickens. Overall, these two different genotypes of avian HEV showed some variant pathogenicity in different bird species. This study provides valuable data for further analysis of the epidemic conditions of two avian HEVs in Hy-Line hens and silkie fowls.


Subject(s)
Chickens , Genotype , Hepatitis, Viral, Animal , Hepevirus , Poultry Diseases , Virus Shedding , Animals , Chickens/virology , Poultry Diseases/virology , Hepevirus/genetics , Hepevirus/pathogenicity , Hepevirus/isolation & purification , Hepevirus/classification , Hepatitis, Viral, Animal/virology , Hepatitis, Viral, Animal/pathology , Female , Feces/virology , Liver/virology , Liver/pathology , Viremia/veterinary , Viremia/virology , RNA Virus Infections/veterinary , RNA Virus Infections/virology , Virulence , Alanine Transaminase/blood
5.
Virology ; 597: 110141, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38917691

ABSTRACT

Alpha-synuclein (α-syn), known for its pivotal role in Parkinson's disease, has recently emerged as a significant player in neurotropic RNA virus infections. Upregulation of α-syn in various viral infections has been found to impact neuroprotective functions by regulating neurotransmitter synthesis, vesicle trafficking, and synaptic vesicle recycling. This review focuses on the multifaceted role of α-syn in controlling viral replication by modulating chemoattractant properties towards microglial cells, virus-induced ER stress signaling, anti-oxidative proteins expression. Furthermore, the text underlines the α-syn-mediated regulation of interferon-stimulated genes. The review may help suggest potential therapeutic avenues for mitigating the impact of RNA viruses on the central nervous system by exploiting α-syn neuroprotective biology.


Subject(s)
RNA Viruses , alpha-Synuclein , alpha-Synuclein/metabolism , alpha-Synuclein/genetics , Humans , RNA Viruses/physiology , RNA Viruses/genetics , Animals , RNA Virus Infections/virology , RNA Virus Infections/immunology , RNA Virus Infections/metabolism , Virus Replication , Neurons/virology , Neurons/metabolism , Microglia/virology , Microglia/metabolism , Endoplasmic Reticulum Stress , Signal Transduction
6.
Fish Shellfish Immunol ; 151: 109718, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38909635

ABSTRACT

Receptors of type I interferon (IFNR) play a vital role in the antiviral immune response. However, little is known about the negative regulatory role of the IFNR. Nervous necrosis virus (NNV) is one of the most significant viruses in cultured fish, resulting in great economic losses for the aquaculture industry. In this study, two orange-spotted grouper (Epinephelus coioides) cytokine receptor family B (CRFB) members, EcCRFB3 and EcCRFB4 were cloned and characterized from NNV infected grouper brain (GB) cells. The open reading frame (ORF) of EcCRFB3 consists of 852 bp encoding 283 amino acids, while EcCRFB4 has an ORF of 990 bp encoding 329 amino acids. The mRNA levels of EcCRFB3 or EcCRFB4 were significantly upregulated after NNV infection and the stimulation of poly (I:C) or NNV-encoded Protein A. In addition, EcCRFB3 or EcCRFB4 overexpression facilitated NNV replication, whereas EcCRFB3 or EcCRFB4 silencing resisted NNV replication. Overexpressed EcCRFB3 or EcCRFB4 inhibited the expression of IFN-I-induced ISGs. Taken together, our research provides the first evidence in fish demonstrating the role of IFNRs to regulate the IFN signaling pathway negatively. Our findings enrich the understanding of the functions of IFNRs and reveal a novel escape mechanism of NNV.


Subject(s)
Amino Acid Sequence , Bass , Fish Diseases , Fish Proteins , Gene Expression Regulation , Immunity, Innate , Nodaviridae , RNA Virus Infections , Virus Replication , Animals , Nodaviridae/physiology , Fish Diseases/immunology , Fish Diseases/virology , RNA Virus Infections/immunology , RNA Virus Infections/veterinary , Fish Proteins/genetics , Fish Proteins/immunology , Bass/immunology , Bass/genetics , Immunity, Innate/genetics , Gene Expression Regulation/immunology , Phylogeny , Sequence Alignment/veterinary , Receptors, Cytokine/genetics , Receptors, Cytokine/immunology , Gene Expression Profiling/veterinary , Interferons/immunology , Interferons/genetics
7.
Fish Shellfish Immunol ; 151: 109715, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38909637

ABSTRACT

Red-spotted grouper nervous necrosis virus (RGNNV) is a major viral pathogen of grouper and is able to antagonize interferon responses through multiple strategies, particularly evading host immune responses by inhibiting interferon responses. Ovarian tumor (OTU) family proteins are an important class of DUBs and the underlying mechanisms used to inhibit interferon pathway activation are unknown. In the present study, primers were designed based on the transcriptome data, and the ovarian tumor (OTU) domain-containing ubiquitin aldehyde-binding protein 1 (OTUB1) and OTUB2 genes of Epinephelus coioides (EcOTUB1 and EcOTUB2) were cloned and characterized. The homology alignment showed that both EcOTUB1 and EcOTUB2 were most closely related to E. lanceolatus with 98 % identity. Both EcOTUB1 and EcOTUB2 were distributed to varying degrees in grouper tissues, and the transcript levels were significantly up-regulated following RGNNV stimulation. Both EcOTUB1 and EcOTUB2 promoted replication of RGNNV in vitro, and inhibited the promoter activities of interferon stimulated response element (ISRE), nuclear transcription factors kappaB (NF-κB) and IFN3, and the expression levels of interferon related genes and proinflammatory factors. Co-immunoprecipitation experiments showed that both EcOTUB1 and EcOTUB2 could interact with TRAF3 and TRAF6, indicating that EcOTUB1 and EcOTUB2 may play important roles in interferon signaling pathway. The results will provide a theoretical reference for the development of novel disease prevention and control techniques.


Subject(s)
Bass , Fish Diseases , Fish Proteins , Immunity, Innate , Nodaviridae , RNA Virus Infections , Virus Replication , Animals , Fish Diseases/immunology , Fish Diseases/virology , Immunity, Innate/genetics , Nodaviridae/physiology , Fish Proteins/genetics , Fish Proteins/immunology , RNA Virus Infections/immunology , RNA Virus Infections/veterinary , Bass/immunology , Phylogeny , Gene Expression Regulation/immunology , Amino Acid Sequence , Sequence Alignment/veterinary , Deubiquitinating Enzymes/genetics , Deubiquitinating Enzymes/immunology , Gene Expression Profiling/veterinary
8.
J Virol ; 98(7): e0068624, 2024 Jul 23.
Article in English | MEDLINE | ID: mdl-38888343

ABSTRACT

Nervous necrosis virus (NNV), an aquatic RNA virus belonging to Betanodavirus, infects a variety of marine and freshwater fishes, leading to massive mortality of cultured larvae and juveniles and substantial economic losses. The enzyme cyclic guanosine monophosphate-adenosine monophosphate synthase (cGAS) is widely recognized as a central component in the innate immune response to cytosolic DNA derived from different pathogens. However, little is known about the response of cGAS to aquatic RNA viruses. This study found that Epinephelus coioides cGAS (EccGAS) overexpression inhibited NNV replication, whereas EccGAS silencing promoted NNV replication. The anti-NNV activity of EccGAS was involved in interferon (IFN) signaling activation including tumor necrosis factor receptor-associated factor family member-associated NF-kappa-B activator-binding kinase 1 (TBK1) phosphorylation, interferon regulatory factor 3 (IRF3) nuclear translocation, and the subsequent induction of IFNc and ISGs. Interestingly, NNV employed its capsid protein (CP) or Protein A (ProA) to negatively or positively modulate EccGAS-mediated IFN signaling by simultaneously targeting EccGAS. CP interacted with EccGAS via the arm-P, S-P, and SD structural domains and promoted its polyubiquitination with K48 and K63 linkages in an EcUBE3C (the ubiquitin ligase)-dependent manner, ultimately leading to EccGAS degradation. Conversely, ProA bound to EccGAS and inhibited its ubiquitination and degradation. In regulating EccGAS protein content, CP's inhibitory action was more pronounced than ProA's protective effect, allowing successful NNV replication. These novel findings suggest that NNV CP and ProA dynamically modulate the EccGAS-mediated IFN signaling pathway to facilitate the immune escape of NNV. Our findings shed light on a novel mechanism of virus-host interaction and provide a theoretical basis for the prevention and control of NNV.IMPORTANCEAs a well-known DNA sensor, cGAS is a pivotal component in innate anti-viral immunity to anti-DNA viruses. Although there is growing evidence regarding the function of cGAS in the resistance to RNA viruses, the mechanisms by which cGAS participates in RNA virus-induced immune responses in fish and how aquatic viruses evade cGAS-mediated immune surveillance remain elusive. Here, we investigated the detailed mechanism by which EccGAS positively regulates the anti-NNV response. Furthermore, NNV CP and ProA interacted with EccGAS, regulating its protein levels through ubiquitin-proteasome pathways, to dynamically modulate the EccGAS-mediated IFN signaling pathway and facilitate viral evasion. Notably, NNV CP was identified to promote the ubiquitination of EccGAS via ubiquitin ligase EcUBE3C. These findings unveil a novel strategy for aquatic RNA viruses to evade cGAS-mediated innate immunity, enhancing our understanding of virus-host interactions.


Subject(s)
Capsid Proteins , Fish Diseases , Immune Evasion , Immunity, Innate , Nodaviridae , Nucleotidyltransferases , RNA Virus Infections , Signal Transduction , Virus Replication , Animals , Fish Diseases/virology , Fish Diseases/immunology , Nucleotidyltransferases/metabolism , Nucleotidyltransferases/genetics , Capsid Proteins/metabolism , Capsid Proteins/immunology , RNA Virus Infections/immunology , RNA Virus Infections/metabolism , Interferons/metabolism , Interferons/immunology , Bass/immunology , Bass/virology , Bass/metabolism , Fish Proteins/metabolism , Fish Proteins/genetics , Fish Proteins/immunology
9.
PLoS Pathog ; 20(6): e1012259, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38861582

ABSTRACT

Antagonistic relationships such as host-virus interactions potentially lead to rapid evolution and specificity in interactions. The Orsay virus is so far the only horizontal virus naturally infecting the nematode C. elegans. In contrast, several related RNA viruses infect its congener C. briggsae, including Santeuil (SANTV) and Le Blanc (LEBV) viruses. Here we focus on the host's intraspecific variation in sensitivity to these two intestinal viruses. Many temperate-origin C. briggsae strains, including JU1264 and JU1498, are sensitive to both, while many tropical strains, such as AF16, are resistant to both. Interestingly, some C. briggsae strains exhibit a specific resistance, such as the HK104 strain, specifically resistant to LEBV. The viral sensitivity pattern matches the strains' geographic and genomic relationships. The heavily infected strains mount a seemingly normal small RNA response that is insufficient to suppress viral infection, while the resistant strains show no small RNA response, suggesting an early block in viral entry or replication. We use a genetic approach from the host side to map genomic regions participating in viral resistance polymorphisms. Using Advanced Intercrossed Recombinant Inbred Lines (RILs) between virus-resistant AF16 and SANTV-sensitive HK104, we detect Quantitative Trait Loci (QTLs) on chromosomes IV and III. Building RILs between virus-sensitive JU1498 and LEBV-resistant HK104 followed by bulk segregant analysis, we identify a chromosome II QTL. In both cases, further introgressions of the regions confirmed the QTLs. This diversity provides an avenue for studying virus entry, replication, and exit mechanisms, as well as host-virus specificity and the host response to a specific virus infection.


Subject(s)
Caenorhabditis , Animals , Caenorhabditis/genetics , Caenorhabditis/virology , RNA Viruses/genetics , Host Specificity , RNA Virus Infections/virology
10.
Front Immunol ; 15: 1304603, 2024.
Article in English | MEDLINE | ID: mdl-38933269

ABSTRACT

Nervous necrosis virus (NNV) is one of the greatest threats to Mediterranean aquaculture, infecting more than 170 fish species and causing mortalities up to 100% in larvae and juveniles of susceptible species. Intensive aquaculture implies stressed conditions that affect the welfare of fish and their ability to fight against infections. In fact, a higher susceptibility to NNV has been related to poor welfare conditions. In order to analyze the physiological link between stressed conditions and increased susceptibility to NNV, as well as its possible role in the pathogenesis of this disease, we reared shi drum (Umbrina cirrosa) juveniles (30.7 ± 3.10 g body weight), which are expected to be asymptomatic upon NNV infection, at three stocking densities (2, 15, and 30 kg/m3) for 27 days and subsequently challenged them with NNV. We firstly characterized the stressed conditions of the specimens before and after infection and recorded the mortalities, demonstrating that stressed specimens reared at 30 kg/m3 suffered mortalities. However, the viral loads in different tissues were similar in all experimental groups, allowing horizontal and vertical transmission of the virus from asymptomatic specimens. All of these data suggest that shi drum tolerates wide ranges of culture densities, although high densities might be a setback for controlling NNV outbreaks in this species. In an attempt to understand the molecular pathways orchestrating this susceptibility change in stressed conditions, we performed a transcriptomic analysis of four tissues under mock- and NNV-infected conditions. In addition to the modification of the exceptive pathways such as cell adhesion, leukocyte migration, cytokine interaction, cell proliferation and survival, and autophagy, we also observed a heavy alteration of the neuroactive ligand-receptor pathway in three of the four tissues analyzed. Our data also point to some of the receptors of this pathway as potential candidates for future pharmacological treatment to avoid the exacerbated immune response that could trigger fish mortalities upon NNV infection.


Subject(s)
Fish Diseases , Nodaviridae , RNA Virus Infections , Animals , Nodaviridae/physiology , Fish Diseases/virology , Fish Diseases/immunology , RNA Virus Infections/immunology , RNA Virus Infections/veterinary , Disease Susceptibility , Aquaculture , Viral Load
11.
Virulence ; 15(1): 2355971, 2024 Dec.
Article in English | MEDLINE | ID: mdl-38745468

ABSTRACT

The vertebrate central nervous system (CNS) is the most complex system of the body. The CNS, especially the brain, is generally regarded as immune-privileged. However, the specialized immune strategies in the brain and how immune cells, specifically macrophages in the brain, respond to virus invasion remain poorly understood. Therefore, this study aimed to examine the potential immune response of macrophages in the brain of orange-spotted groupers (Epinephelus coioides) following red-spotted grouper nervous necrosis virus (RGNNV) infection. We observed that RGNNV induced macrophages to produce an inflammatory response in the brain of orange-spotted grouper, and the macrophages exhibited M1-type polarization after RGNNV infection. In addition, we found RGNNV-induced macrophage M1 polarization via the CXCR3.2- CXCL11 pathway. Furthermore, we observed that RGNNV triggered M1 polarization in macrophages, resulting in substantial proinflammatory cytokine production and subsequent damage to brain tissue. These findings reveal a unique mechanism for brain macrophage polarization, emphasizing their role in contributing to nervous tissue damage following viral infection in the CNS.


Subject(s)
Brain , Fish Diseases , Macrophages , Nodaviridae , RNA Virus Infections , Animals , Macrophages/immunology , Macrophages/virology , Fish Diseases/virology , Fish Diseases/immunology , Brain/virology , Brain/immunology , Brain/pathology , Nodaviridae/physiology , RNA Virus Infections/immunology , RNA Virus Infections/virology , Chemokine CXCL11 , Receptors, CXCR3/metabolism , Bass/immunology , Bass/virology , Signal Transduction , Cytokines/metabolism , Cytokines/immunology , Fish Proteins/immunology , Fish Proteins/genetics
12.
Fish Shellfish Immunol ; 151: 109646, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38810712

ABSTRACT

To achieve insights in antiviral immune defense of the central nervous system (CNS), we investigated T cells and CD45 cells in the marine fish model Dicentrarchus labrax infected with the CNS-tropic virus betanodavirus. By employing markers for pan-T cells (mAb DLT15) and CD45-cells (mAb DLT22) in immunofluorescence (IIF) of leukocytes from brain, we obtained 3,7 ± 2.3 % of T cells and 7.3 ± 3.2 % of CD45+ cells. Both IIF and immunoelectron microscopy confirmed a leukocyte/glial morphology for the immunoreactive cells. Quantitative immunohistochemistry (qIHC) of brain/eye sections showed 1.9 ± 0.8 % of T+ cells and 2 ± 0.9 % of CD45+ cells in the brain, and 3.6 ± 1.9 % and 4.1 ± 2.2 % in the eye, respectively. After in vivo RGNNV infection the number of T cells/CD45+ leukocytes in the brain increased to 8.3 ± 2.1 % and 11.6 ± 4.4 % (by IIF), and 26.1 ± 3.4 % and 45.6 ± 5.9 % (by qIHC), respectively. In the eye we counted after infection 8.5 ± 4.4 % of T cells and 10.2 ± 5.8 % of CD45 cells. Gene transcription analysis of brain mRNA revealed a strong increase of gene transcripts coding for: antiviral proteins Mx and ISG-12; T-cell related CD3ε/δ, TcRß, CD4, CD8α, CD45; and for immuno-modulatory cytokines TNFα, IL-2, IL-10. A RAG-1 gene product was also present and upregulated, suggesting somatic recombination in the fish brain. Similar transcription data were obtained in the eye, albeit with differences. Our findings provide first evidence for a recruitment and involvement of T cells and CD45+ leukocytes in the fish eye-brain axis during antiviral responses and suggest similarities in the CNS immune defense across evolutionary distant vertebrates.


Subject(s)
Bass , Fish Diseases , Leukocyte Common Antigens , Nodaviridae , RNA Virus Infections , T-Lymphocytes , Animals , Nodaviridae/physiology , Fish Diseases/immunology , Fish Diseases/virology , Bass/immunology , RNA Virus Infections/veterinary , RNA Virus Infections/immunology , RNA Virus Infections/virology , Leukocyte Common Antigens/metabolism , Leukocyte Common Antigens/genetics , Leukocyte Common Antigens/immunology , T-Lymphocytes/immunology , Fish Proteins/genetics , Fish Proteins/immunology , Central Nervous System/immunology , Central Nervous System/virology , Brain/virology , Brain/immunology
13.
Fish Shellfish Immunol ; 150: 109650, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38788912

ABSTRACT

Nectins are adhesion molecules that play a crucial role in the organization of epithelial and endothelial junctions and function as receptors for the entry of herpes simplex virus. However, the role of Nectin4 remains poorly understood in fish. In this study, nectin4 gene was cloned from medaka (OlNectin4). OlNectin4 was located on chromosome 18 and contained 11 exons, with a total genome length of 25754 bp, coding sequences of 1689 bp, coding 562 amino acids and a molecular weight of 65.5 kDa. OlNectin4 contained four regions, including an Immunoglobulin region, an Immunoglobulin C-2 Type region, a Transmembrane region and a Coiled coil region. OlNectin4 shared 47.18 % and 25.00 % identity to Paralichthys olivaceus and Mus musculus, respectively. In adult medaka, the transcript of nectin4 was predominantly detected in gill. During red spotted grouper nervous necrosis virus (RGNNV) infection, overexpression of OlNectin4 in GE cells significantly increased viral gene transcriptions. Meanwhile, Two mutants named OlNectin4△4 (+4 bp) and OlNectin4△7 (-7 bp) medaka were established using CRISPR-Cas9 system. Nectin4-KO medaka had higher mortality than WT after infected with RGNNV. Moreover, the expression of RGNNV RNA2 gene in different tissues of the Nectin4-KO were higher than WT medaka after challenged with RGNNV. The brain and eye of Nectin4-KO medaka which RGNNV mainly enriched, exhibited significantly higher expression of interferon signaling genes than in WT. Taken together, the OlNectin4 plays a complex role against RGNNV infection by inducing interferon responses for viral clearance.


Subject(s)
Fish Diseases , Fish Proteins , Nectins , Nodaviridae , Oryzias , RNA Virus Infections , Animals , Oryzias/genetics , Oryzias/immunology , Nodaviridae/physiology , RNA Virus Infections/veterinary , RNA Virus Infections/immunology , Nectins/genetics , Nectins/immunology , Fish Proteins/genetics , Fish Proteins/immunology , Fish Proteins/chemistry , Fish Diseases/immunology , Fish Diseases/virology , Phylogeny , Amino Acid Sequence , Immunity, Innate/genetics , Sequence Alignment/veterinary , Gene Expression Regulation/immunology , Gene Expression Profiling/veterinary
14.
J Virol ; 98(6): e0010824, 2024 Jun 13.
Article in English | MEDLINE | ID: mdl-38742874

ABSTRACT

Numerous studies have demonstrated the presence of covert viral infections in insects. These infections can be transmitted in insect populations via two main routes: vertical from parents to offspring, or horizontal between nonrelated individuals. Thirteen covert RNA viruses have been described in the Mediterranean fruit fly (medfly). Some of these viruses are established in different laboratory-reared and wild medfly populations, although variations in the viral repertoire and viral levels have been observed at different time points. To better understand these viral dynamics, we characterized the prevalence and levels of covert RNA viruses in two medfly strains, assessed the route of transmission of these viruses, and explored their distribution in medfly adult tissues. Altogether, our results indicated that the different RNA viruses found in medflies vary in their preferred route of transmission. Two iflaviruses and a narnavirus are predominantly transmitted through vertical transmission via the female, while a nodavirus and a nora virus exhibited a preference for horizontal transmission. Overall, our results give valuable insights into the viral tropism and transmission of RNA viruses in the medfly, contributing to the understanding of viral dynamics in insect populations. IMPORTANCE: The presence of RNA viruses in insects has been extensively covered. However, the study of host-virus interaction has focused on viruses that cause detrimental effects to the host. In this manuscript, we uncovered which tissues are infected with covert RNA viruses in the agricultural pest Ceratitis capitata, and which is the preferred transmission route of these viruses. Our results showed that vertical and horizontal transmission can occur simultaneously, although each virus is transmitted more efficiently following one of these routes. Additionally, our results indicated an association between the tropism of the RNA virus and the preferred route of transmission. Overall, these results set the basis for understanding how viruses are established and maintained in medfly populations.


Subject(s)
Ceratitis capitata , RNA Viruses , Viral Tropism , Animals , RNA Viruses/genetics , RNA Viruses/physiology , Female , Ceratitis capitata/virology , Male , RNA Virus Infections/transmission , RNA Virus Infections/virology
15.
Drug Discov Today ; 29(7): 104044, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38796097

ABSTRACT

The increase in diseases caused by RNA viruses, such as influenza, severe acute respiratory syndrome-coronavirus (SARS-CoV), Middle East respiratory syndrome (MERS), and Ebola, presents a growing global health challenge as well as the threat of zoonosis. Traditional antiviral treatments are often undermined by fast-mutating viruses, drug resistance, and newly emerging pathogens. Here, we explore proteolysis-targeting chimeras (PROTACs), a novel protein degradation machinery that has the potential to reshape the way in which RNA viral infections can be managed. PROTACs excel at specifically degrading pathogenic proteins, offering a targeted and efficient antiviral strategy. We also investigate the potential of exosome-based diagnostic technologies, which harness cell-derived nanovesicles for non-invasive sampling and early viral infection detection. Addressing the challenge of PROTAC delivery, we introduce a groundbreaking strategy utilizing exosomes to deliver PROTACs with improved precision and as a targeted delivery vehicle. Integrating these innovative strategies provides a novel approach to combat RNA zoonotic viral diseases, paving the way for a new era in antiviral therapy.


Subject(s)
Antiviral Agents , Exosomes , Proteolysis , Humans , Animals , Antiviral Agents/pharmacology , Antiviral Agents/administration & dosage , Proteolysis/drug effects , RNA Virus Infections/drug therapy , Drug Delivery Systems/methods , Zoonoses/drug therapy , Zoonoses/virology
16.
Nat Commun ; 15(1): 4127, 2024 May 15.
Article in English | MEDLINE | ID: mdl-38750080

ABSTRACT

Stress granules (SGs) are induced by various environmental stressors, resulting in their compositional and functional heterogeneity. SGs play a crucial role in the antiviral process, owing to their potent translational repressive effects and ability to trigger signal transduction; however, it is poorly understood how these antiviral SGs differ from SGs induced by other environmental stressors. Here we identify that TRIM25, a known driver of the ubiquitination-dependent antiviral innate immune response, is a potent and critical marker of the antiviral SGs. TRIM25 undergoes liquid-liquid phase separation (LLPS) and co-condenses with the SG core protein G3BP1 in a dsRNA-dependent manner. The co-condensation of TRIM25 and G3BP1 results in a significant enhancement of TRIM25's ubiquitination activity towards multiple antiviral proteins, which are mainly located in SGs. This co-condensation is critical in activating the RIG-I signaling pathway, thus restraining RNA virus infection. Our studies provide a conceptual framework for better understanding the heterogeneity of stress granule components and their response to distinct environmental stressors.


Subject(s)
DNA Helicases , Poly-ADP-Ribose Binding Proteins , RNA Helicases , RNA Recognition Motif Proteins , Signal Transduction , Stress Granules , Tripartite Motif Proteins , Ubiquitin-Protein Ligases , Ubiquitination , Humans , Poly-ADP-Ribose Binding Proteins/metabolism , Poly-ADP-Ribose Binding Proteins/genetics , Tripartite Motif Proteins/metabolism , Tripartite Motif Proteins/genetics , RNA Recognition Motif Proteins/metabolism , RNA Recognition Motif Proteins/genetics , Ubiquitin-Protein Ligases/metabolism , Ubiquitin-Protein Ligases/genetics , Stress Granules/metabolism , RNA Helicases/metabolism , DNA Helicases/metabolism , DEAD Box Protein 58/metabolism , Transcription Factors/metabolism , Transcription Factors/genetics , Immunity, Innate , RNA, Double-Stranded/metabolism , HEK293 Cells , HeLa Cells , Cytoplasmic Granules/metabolism , RNA Virus Infections/virology , RNA Virus Infections/metabolism , RNA Virus Infections/immunology , Receptors, Immunologic/metabolism
17.
PLoS Pathog ; 20(5): e1012230, 2024 May.
Article in English | MEDLINE | ID: mdl-38776321

ABSTRACT

While macrophage is one of the major type I interferon (IFN-I) producers in multiple tissues during viral infections, it also serves as an important target cell for many RNA viruses. However, the regulatory mechanism for the IFN-I response of macrophages to respond to a viral challenge is not fully understood. Here we report ADAP, an immune adaptor protein, is indispensable for the induction of the IFN-I response of macrophages to RNA virus infections via an inhibition of the conjugation of ubiquitin-like ISG15 (ISGylation) to RIG-I. Loss of ADAP increases RNA virus replication in macrophages, accompanied with a decrease in LPS-induced IFN-ß and ISG15 mRNA expression and an impairment in the RNA virus-induced phosphorylation of IRF3 and TBK1. Moreover, using Adap-/- mice, we show ADAP deficiency strongly increases the susceptibility of macrophages to RNA-virus infection in vivo. Mechanically, ADAP selectively interacts and functionally cooperates with RIG-I but not MDA5 in the activation of IFN-ß transcription. Loss of ADAP results in an enhancement of ISGylation of RIG-I, whereas overexpression of ADAP exhibits the opposite effect in vitro, indicating ADAP is detrimental to the RNA virus-induced ISGylation of RIG-I. Together, our data demonstrate a novel antagonistic activity of ADAP in the cell-intrinsic control of RIG-I ISGylation, which is indispensable for initiating and sustaining the IFN-I response of macrophages to RNA virus infections and replication.


Subject(s)
Adaptor Proteins, Signal Transducing , DEAD Box Protein 58 , Interferon Type I , Macrophages , Mice, Knockout , RNA Virus Infections , Ubiquitins , Animals , Macrophages/virology , Macrophages/metabolism , Macrophages/immunology , Mice , RNA Virus Infections/immunology , RNA Virus Infections/metabolism , Ubiquitins/metabolism , Ubiquitins/genetics , DEAD Box Protein 58/metabolism , Interferon Type I/metabolism , Adaptor Proteins, Signal Transducing/metabolism , Adaptor Proteins, Signal Transducing/genetics , Cytokines/metabolism , Mice, Inbred C57BL , Humans , Receptors, Immunologic/metabolism , Interferon-beta/metabolism , RNA Viruses/immunology , Interferon Regulatory Factor-3/metabolism
18.
Viruses ; 16(4)2024 04 18.
Article in English | MEDLINE | ID: mdl-38675972

ABSTRACT

Orthobunyavirus is the largest and most diverse genus in the family Peribunyaviridae. Orthobunyaviruses are widely distributed globally and pose threats to human and animal health. Ebinur Lake virus (EBIV) is a newly classified Orthobunyavirus detected in China, Russia, and Kenya. This study explored the antiviral effects of two broad-spectrum antiviral drugs, favipiravir and ribavirin, in a BALB/c mouse model. Favipiravir significantly improved the clinical symptoms of infected mice, reduced viral titer and RNA copies in serum, and extended overall survival. The median survival times of mice in the vehicle- and favipiravir-treated groups were 5 and 7 days, respectively. Favipiravir significantly reduced virus titers 10- to 100-fold in sera at all three time points compared to vehicle-treated mice. And favipiravir treatment effectively reduced the virus copies by approximately 10-fold across the three time points, relative to vehicle-treated mice. The findings expand the antiviral spectrum of favipiravir for orthobunyaviruses in vivo.


Subject(s)
Amides , Antiviral Agents , Disease Models, Animal , Mice, Inbred BALB C , Pyrazines , Viral Load , Animals , Pyrazines/therapeutic use , Pyrazines/pharmacology , Amides/pharmacology , Amides/therapeutic use , Antiviral Agents/therapeutic use , Antiviral Agents/pharmacology , Mice , Viral Load/drug effects , Female , Ribavirin/therapeutic use , Ribavirin/pharmacology , RNA Virus Infections/drug therapy , RNA Virus Infections/virology
19.
Fish Shellfish Immunol ; 149: 109553, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38615704

ABSTRACT

Viral diseases have caused great economic losses to the aquaculture industry. However, there are currently no specific drugs to treat these diseases. Herein, we utilized Siniperca chuatsi as an experimental model, and successfully extracted two tissue factor pathway inhibitors (TFPIs) that were highly distributed in different tissues. We then designed four novel peptides based on the TFPIs, named TS20, TS25, TS16, and TS30. Among them, TS25 and TS30 showed good biosafety and high antiviral activity. Further studies showed that TS25 and TS30 exerted their antiviral functions by preventing viruses from invading Chinese perch brain (CPB) cells and disrupting Siniperca chuatsi rhabdovirus (SCRV)/Siniperca chuatsi ranairidovirus (SCRIV) viral structures. Additionally, compared with the control group, TS25 and TS30 could significantly reduce the mortality of Siniperca chuatsi, the relative protection rates of TS25 against SCRV and SCRIV were 71.25 % and 53.85 % respectively, and the relative protection rate of TS30 against SCRIV was 69.23 %, indicating that they also had significant antiviral activity in vivo. This study provided an approach for designing peptides with biosafety and antiviral activity based on host proteins, which had potential applications in the prevention and treatment of viral diseases.


Subject(s)
Fish Diseases , Rhabdoviridae Infections , Rhabdoviridae , Animals , Fish Diseases/virology , Rhabdoviridae Infections/veterinary , Rhabdoviridae Infections/immunology , Rhabdoviridae Infections/prevention & control , Rhabdoviridae/physiology , Antiviral Agents/pharmacology , Antiviral Agents/chemistry , Perches , Fish Proteins/chemistry , Fish Proteins/genetics , Fish Proteins/immunology , Peptides/pharmacology , Peptides/chemistry , RNA Virus Infections/veterinary , RNA Virus Infections/immunology , RNA Virus Infections/prevention & control
20.
J Virol Methods ; 327: 114922, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38556175

ABSTRACT

A 2D primary gill cell culture system of the sevenband grouper (Hyporthodus septemfasciatus) was established to validate the pathogenesis of nervous necrosis virus (NNV) as observed in previous studies. This system, developed using the double-seeded insert (DSI) technique, yielded confluent cell layers. Upon challenge with NNV in a setup containing both autoclaved salt water and L15 media in the apical compartment, viral replication akin to that anticipated based on previous studies was observed. Consequently, we advocate for the utilization of primary gill cell culture as a viable alternative to conventional methodologies for investigating host pathogen interactions.


Subject(s)
Gills , Nodaviridae , Virus Replication , Animals , Gills/virology , Gills/cytology , Nodaviridae/physiology , Primary Cell Culture/methods , Bass/virology , Fish Diseases/virology , Cell Culture Techniques/methods , RNA Virus Infections/veterinary , RNA Virus Infections/virology , Cells, Cultured , Host-Pathogen Interactions
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