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1.
Science ; 349(6251): 970-3, 2015 Aug 28.
Article in English | MEDLINE | ID: mdl-26315436

ABSTRACT

The global biogeography of microorganisms remains largely unknown, in contrast to the well-studied diversity patterns of macroorganisms. We used arbuscular mycorrhizal (AM) fungus DNA from 1014 plant-root samples collected worldwide to determine the global distribution of these plant symbionts. We found that AM fungal communities reflected local environmental conditions and the spatial distance between sites. However, despite AM fungi apparently possessing limited dispersal ability, we found 93% of taxa on multiple continents and 34% on all six continents surveyed. This contrasts with the high spatial turnover of other fungal taxa and with the endemism displayed by plants at the global scale. We suggest that the biogeography of AM fungi is driven by unexpectedly efficient dispersal, probably via both abiotic and biotic vectors, including humans.


Subject(s)
Ecosystem , Mycorrhizae , Plant Roots/microbiology , Symbiosis , Animals , Biodiversity , DNA, Fungal/analysis , Environment , Humans , Mycorrhizae/genetics , Mycorrhizae/isolation & purification , Mycorrhizae/physiology , Phylogeny , Phylogeography , Water , Wind
2.
New Phytol ; 188(1): 223-41, 2010 Oct.
Article in English | MEDLINE | ID: mdl-20561207

ABSTRACT

• Here, we describe a new database, MaarjAM, that summarizes publicly available Glomeromycota DNA sequence data and associated metadata. The goal of the database is to facilitate the description of distribution and richness patterns in this group of fungi. • Small subunit (SSU) rRNA gene sequences and available metadata were collated from all suitable taxonomic and ecological publications. These data have been made accessible in an open-access database (http://maarjam.botany.ut.ee). • Two hundred and eighty-two SSU rRNA gene virtual taxa (VT) were described based on a comprehensive phylogenetic analysis of all collated Glomeromycota sequences. Two-thirds of VT showed limited distribution ranges, occurring in single current or historic continents or climatic zones. Those VT that associated with a taxonomically wide range of host plants also tended to have a wide geographical distribution, and vice versa. No relationships were detected between VT richness and latitude, elevation or vascular plant richness. • The collated Glomeromycota molecular diversity data suggest limited distribution ranges in most Glomeromycota taxa and a positive relationship between the width of a taxon's geographical range and its host taxonomic range. Inconsistencies between molecular and traditional taxonomy of Glomeromycota, and shortage of data from major continents and ecosystems, are highlighted.


Subject(s)
Databases, Genetic , Ecosystem , Glomeromycota/classification , Glomeromycota/genetics , Internet , Mycorrhizae/classification , Mycorrhizae/genetics , Cluster Analysis , Geography , Phylogeny , Ribosome Subunits, Small/genetics
3.
New Phytol ; 184(2): 424-437, 2009 Oct.
Article in English | MEDLINE | ID: mdl-19558424

ABSTRACT

* Knowledge of the diversity of arbuscular mycorrhizal fungi (AMF) in natural ecosystems is a major bottleneck in mycorrhizal ecology. Here, we aimed to apply 454 sequencing--providing a new level of descriptive power--to assess the AMF diversity in a boreonemoral forest. * 454 sequencing reads of the small subunit ribosomal RNA (SSU rRNA) gene of Glomeromycota were assigned to sequence groups by blast searches against a custom-made annotated sequence database. * We detected 47 AMF taxa in the roots of 10 plant species in a 10 x 10 m plot, which is almost the same as the number of plant species in the whole studied forest. There was a significant difference between AMF communities in the roots of forest specialist plant species and in the roots of habitat generalist plant species. Forest plant species hosted 22 specialist AMF taxa, and the generalist plants shared all but one AMF taxon with forest plants, including globally distributed generalist fungi. These AMF taxa that have been globally recorded only in forest ecosystems were significantly over-represented in the roots of forest plant species. * Our findings suggest that partner specificity in AM symbiosis may occur at the level of ecological groups, rather than at the species level, of both plant and fungal partners.


Subject(s)
Fungi/classification , Genes, Fungal , Glomeromycota/genetics , Mycorrhizae/genetics , Trees/genetics , Biodiversity , Ecosystem , Fungi/genetics , Plant Roots , RNA, Fungal , RNA, Ribosomal , Ribosome Subunits, Small, Eukaryotic/genetics , Sequence Analysis, DNA/methods , Species Specificity
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