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1.
Radiother Oncol ; 182: 109545, 2023 05.
Article in English | MEDLINE | ID: mdl-36813170

ABSTRACT

BACKGROUND: The STRIDeR (Support Tool for Re-Irradiation Decisions guided by Radiobiology) project aims to create a clinically viable re-irradiation planning pathway within a commercial treatment planning system (TPS). Such a pathway should account for previously delivered dose, voxel-by-voxel, taking fractionation effects, tissue recovery and anatomical changes into account. This work presents the workflow and technical solutions in the STRIDeR pathway. METHODS: The pathway was implemented in RayStation (version 9B DTK) to allow an original dose distribution to be used as background dose to guide optimisation of re-irradiation plans. Organ at risk (OAR) planning objectives in equivalent dose in 2 Gy fractions (EQD2) were applied cumulatively across the original and re-irradiation treatments, with optimisation of the re-irradiation plan performed voxel-by-voxel in EQD2. Different approaches to image registration were employed to account for anatomical change. Data from 21 patients who received pelvic Stereotactic Ablative Radiotherapy (SABR) re-irradiation were used to illustrate the use of the STRIDeR workflow. STRIDeR plans were compared to those produced using a standard manual method. RESULTS: The STRIDeR pathway resulted in clinically acceptable plans in 20/21 cases. Compared to plans produced using the laborious manual method, less constraint relaxation was required or higher re-irradiation doses could be prescribed in 3/21. CONCLUSION: The STRIDeR pathway used background dose to guide radiobiologically meaningful, anatomically-appropriate re-irradiation treatment planning within a commercial TPS. This provides a standardised and transparent approach, offering more informed re-irradiation and improved cumulative OAR dose evaluation.


Subject(s)
Radiotherapy, Intensity-Modulated , Re-Irradiation , Humans , Radiotherapy Dosage , Re-Irradiation/methods , Radiotherapy Planning, Computer-Assisted/methods , Dose Fractionation, Radiation , Radiotherapy, Intensity-Modulated/methods , Organs at Risk/radiation effects
2.
Acta Oncol ; 61(1): 64-72, 2022 Jan.
Article in English | MEDLINE | ID: mdl-34586938

ABSTRACT

BACKGROUND: Re-irradiation (reRT) is a promising technique for patients with localized recurrence in a previously irradiated area but presents major challenges. These include how to deal with anatomical change between two courses of radiotherapy and integration of radiobiology when summating original and re-irradiation doses. The Support Tool for Re-Irradiation Decisions guided by Radiobiology (STRIDeR) project aims to develop a software tool for use in a commercial treatment planning system to facilitate more informed reRT by accounting for anatomical changes and incorporating radiobiology. We evaluated three approaches to dose summation, incorporating anatomical change and radiobiology to differing extents. METHODS: In a cohort of 21 patients who previously received pelvic re-irradiation the following dose summation strategies were compared: (1) Rigid registration (RIR) and physical dose summation, to reflect the current clinical approach, (2) RIR and radiobiological dose summation in equivalent dose in 2 Gy fractions (EQD2), and (3) Patient-specific deformable image registration (DIR) with EQD2 dose summation. RESULTS: RIR and physical dose summation (Strategy 1) resulted in high cumulative organ at risk (OAR) doses being 'missed' in 14% of cases, which were highlighted by EQD2 dose summation (Strategy 2). DIR (with EQD2 dose summation; Strategy 3) resulted in improved OAR overlap and distance to agreement metrics compared to RIR (with EQD2 dose summation; Strategy 2) and was consistently preferred in terms of clinical utility. DIR was considered to have a clinically important impact on dose summation in 38% of cases. CONCLUSION: Re-irradiation cases require individualized assessment when considering dose summation with the previous treatment plan. Fractionation correction is necessary to meaningfully assess cumulative doses and reduce the risk of unintentional OAR overdose. DIR can add clinically relevant information in selected cases, especially for significant anatomical change. Robust solutions for cumulative dose assessment offer the potential for future improved understanding of cumulative OAR tolerances.


Subject(s)
Re-Irradiation , Dose Fractionation, Radiation , Humans , Pelvis , Radiotherapy Dosage , Radiotherapy Planning, Computer-Assisted
4.
Am J Hum Genet ; 91(3): 565-71, 2012 Sep 07.
Article in English | MEDLINE | ID: mdl-22901946

ABSTRACT

Autozygosity mapping and clonal sequencing of an Omani family identified mutations in the uncharacterized gene, C4orf26, as a cause of recessive hypomineralized amelogenesis imperfecta (AI), a disease in which the formation of tooth enamel fails. Screening of a panel of 57 autosomal-recessive AI-affected families identified eight further families with loss-of-function mutations in C4orf26. C4orf26 encodes a putative extracellular matrix acidic phosphoprotein expressed in the enamel organ. A mineral nucleation assay showed that the protein's phosphorylated C terminus has the capacity to promote nucleation of hydroxyapatite, suggesting a possible function in enamel mineralization during amelogenesis.


Subject(s)
Amelogenesis Imperfecta/genetics , Nerve Tissue Proteins/genetics , Amelogenesis/genetics , Dental Enamel/metabolism , Durapatite/metabolism , Female , Humans , Male , Mutation , Pedigree
5.
Cells Tissues Organs ; 194(2-4): 279-83, 2011.
Article in English | MEDLINE | ID: mdl-21597265

ABSTRACT

Amelogenesis imperfecta (AI) represents hereditary conditions affecting the quality and quantity of enamel. Six genes are known to cause AI (AMELX, ENAM, MMP20, KLK4, FAM83H, and WDR72). Our aim was to determine the distribution of different gene mutations in a large AI population and evaluate phenotype-genotype relationships. Affected and unaffected family members were evaluated clinically and radiographically by one examiner. Genotyping was completed using genomic DNA obtained from blood or saliva. A total of 494 individuals were enrolled, with 430 (224 affected, 202 unaffected, and 4 not definitive) belonging to 71 families with conditions consistent with the diagnosis of AI. Diverse clinical phenotypes were observed (i.e. hypoplastic, hypocalcified, and hypomaturation). Genotyping revealed mutations in all 6 candidate genes. A molecular diagnosis was made in 132 affected individuals (59%) and in 26 of the families (37%). Mutations involved 12 families with FAM83H (46%), 6 families with AMELX (23%), 3 families with ENAM (11%), 2 families with KLK4 and MMP20 (8% for each gene), and 1 family with a WDR72 mutation (4%). Phenotypic variants were associated with allelic FAM83H and AMELX mutations. Two seemingly unrelated families had the same KLK4 mutation. Families affected with AI where candidate gene mutations were not identified could have mutations not identifiable by traditional gene sequencing (e.g. exon deletion) or they could have promoter sequence mutations not evaluated in this study. However, the results suggest that there remain new AI causative genes to be identified.


Subject(s)
Amelogenesis Imperfecta/genetics , Amelogenesis Imperfecta/pathology , Genetic Association Studies , Family , Humans , Mutation/genetics
8.
Orphanet J Rare Dis ; 2: 17, 2007 Apr 04.
Article in English | MEDLINE | ID: mdl-17408482

ABSTRACT

Amelogenesis imperfecta (AI) represents a group of developmental conditions, genomic in origin, which affect the structure and clinical appearance of enamel of all or nearly all the teeth in a more or less equal manner, and which may be associated with morphologic or biochemical changes elsewhere in the body. The prevalence varies from 1:700 to 1:14,000, according to the populations studied. The enamel may be hypoplastic, hypomineralised or both and teeth affected may be discoloured, sensitive or prone to disintegration. AI exists in isolation or associated with other abnormalities in syndromes. It may show autosomal dominant, autosomal recessive, sex-linked and sporadic inheritance patterns. In families with an X-linked form it has been shown that the disorder may result from mutations in the amelogenin gene, AMELX. The enamelin gene, ENAM, is implicated in the pathogenesis of the dominant forms of AI. Autosomal recessive AI has been reported in families with known consanguinity. Diagnosis is based on the family history, pedigree plotting and meticulous clinical observation. Genetic diagnosis is presently only a research tool. The condition presents problems of socialisation, function and discomfort but may be managed by early vigorous intervention, both preventively and restoratively, with treatment continued throughout childhood and into adult life. In infancy, the primary dentition may be protected by the use of preformed metal crowns on posterior teeth. The longer-term care involves either crowns or, more frequently these days, adhesive, plastic restorations.


Subject(s)
Amelogenesis Imperfecta/diagnosis , Amelogenesis Imperfecta/genetics , Adolescent , Adult , Amelogenesis Imperfecta/classification , Amelogenesis Imperfecta/therapy , Amelogenin/genetics , Child , Child, Preschool , Dental Enamel/abnormalities , Dental Enamel Proteins/genetics , Diagnosis, Differential , Genetic Diseases, X-Linked/classification , Genetic Diseases, X-Linked/diagnosis , Genetic Diseases, X-Linked/genetics , Genetic Diseases, X-Linked/therapy , Humans , Infant , Kallikreins/genetics , Matrix Metalloproteinase 20/genetics , Mutation , Syndrome
9.
Article in English | MEDLINE | ID: mdl-16448924

ABSTRACT

Hyperparathyroidism-jaw tumor syndrome (HPT-JT) is an important diagnosis because of the possible involvement of other family members and risk of malignant disease. We report clinical and genetic studies in a previously undocumented Australian family with HPT-JT. The proband and his sister presented with bilateral or recurrent mandibular radiolucencies diagnosed histopathologically as cemento-ossifying fibromas. Mutation screening of the recently identified disease gene HRPT2 was performed by direct sequencing in 3 affected members. This revealed a novel mutation in exon 1 of HRPT2 (nt 20AGGACG --> GGGAG), which is predicted to inactivate the parafibromin protein through protein truncation and premature termination of translation. The terminology used for the jaw lesions in this syndrome warrants review to become more consistent. Cemento-ossifying fibroma is the preferred term to better reflect the pathologies found in most individuals and families,and to emphasize the significance of the jaw lesions in the diagnosis of the syndrome.


Subject(s)
Cementoma/genetics , Fibroma, Ossifying/genetics , Hyperparathyroidism, Primary/genetics , Mandibular Neoplasms/genetics , Adenoma/genetics , Adolescent , Adult , Australia , Cementoma/complications , Cementoma/pathology , Codon, Nonsense , DNA Mutational Analysis , Female , Fibroma, Ossifying/complications , Fibroma, Ossifying/pathology , Germ-Line Mutation , Humans , Hyperparathyroidism, Primary/complications , Hyperparathyroidism, Primary/pathology , Male , Mandibular Neoplasms/complications , Middle Aged , Parathyroid Neoplasms/genetics , Pedigree , Syndrome , Tooth Root/pathology , Tumor Suppressor Proteins/genetics
10.
Am J Med Genet A ; 133A(2): 138-41, 2005 Mar 01.
Article in English | MEDLINE | ID: mdl-15666299

ABSTRACT

Amelogenesis imperfecta hypoplastic-hypomaturation with taurodontism (AIHHT) is an autosomal dominant (AD) trait associated with enamel defects and enlarged pulp chambers. In this study, we mapped an AIHHT family to human chromosome 17 q21-q22 (lod score 3.3) and identify a two basepair deletion (CT) at nucleotide 560 in DLX3 associated with the disease. This mutation causes a frameshift altering the last two amino acids of the DNA-binding homeodomain introducing a premature stop codon truncating the protein by 88 amino acids. This is the first report of a mutation within the homeodomain of DLX3. Previous studies have shown a DLX3 mutation outside the homeodomain associated with tricho-dento-osseous syndrome (TDO) suggesting TDO and some forms of AIHHT are allelic.


Subject(s)
Abnormalities, Multiple/genetics , Amelogenesis Imperfecta/pathology , Dental Pulp Cavity/abnormalities , Homeodomain Proteins/genetics , Mutation , Transcription Factors/genetics , Abnormalities, Multiple/pathology , Amino Acid Sequence , Australia , Base Sequence , Chromosomes, Human, Pair 17/genetics , DNA/chemistry , DNA/genetics , DNA Mutational Analysis , Family Health , Female , Genes, Dominant/genetics , Genetic Linkage , Humans , Lod Score , Male , Microsatellite Repeats , Molecular Sequence Data , Pedigree , Polymorphism, Single-Stranded Conformational , Sequence Deletion
11.
Article in English | MEDLINE | ID: mdl-15583541

ABSTRACT

We report a pattern of enamel hypoplasia in focal dermal hypoplasia similar to that found in females with X-linked amelogenesis imperfecta. Three cases of focal dermal hypoplasia are described, with specific focus on the oral and dental features. In these cases the teeth all had vertical grooving with notching of the incisal or cuspal tips. Also recorded were blunt roots of taurodont form with open apices and missing teeth in 1 case. Oral papillomas were present in 2 cases. The pattern of enamel defects is attributed to Lyonization, which is consistent with the pattern of skin and bone lesions typically seen in focal dermal hypoplasia. This supports the proposal that focal dermal hypoplasia is X-linked. The authors conclude that the pattern of dental defects in focal dermal hypoplasia is consistent with Lyonization.


Subject(s)
Dental Enamel/abnormalities , Focal Dermal Hypoplasia/pathology , Anodontia/pathology , Child , Child, Preschool , Dental Pulp Cavity/abnormalities , Female , Focal Dermal Hypoplasia/genetics , Genetic Diseases, X-Linked/genetics , Humans , Infant , Male , Mouth Neoplasms/pathology , Papilloma/pathology , Tooth Crown/abnormalities , Tooth Root/abnormalities
14.
Pathology ; 35(5): 393-6, 2003 Oct.
Article in English | MEDLINE | ID: mdl-14555382

ABSTRACT

AIMS: To describe 15 cases of oral focal mucinosis (OFM) and compare these to previously reported cases. METHODS: Cases diagnosed as OFM in the period 1981-2003-were reviewed. Clinical information provided at the time of submission of each specimen was retrieved and supplemented by additional clinical details provided by the respective clinician at the time of compilation of this paper. The literature was reviewed. RESULTS: OFM presented as an innocuous soft tissue swelling that may be either pedunculated or sessile. The gingiva was confirmed as the most common site for OFM, with a predominance of females affected. Microscopically, OFM is characterised by an area of myxoid tissue which is usually well-defined. The lesion is periodic acid-Schiff (PAS)-negative and alcian blue-positive, with pre-digestion with hyaluronidase preventing the alcian blue staining. As the differential diagnosis includes myxoid neural lesions, S100 staining is important in establishing the diagnosis, with cases of OFM being negative. CONCLUSIONS: The cause of OFM remains unknown. The cases presented in this paper bring OFM to the attention of anatomical pathologists when considering the differential diagnosis of myxoid lesions of the oral cavity.


Subject(s)
Mouth Diseases/pathology , Mucinoses/pathology , Adolescent , Adult , Aged , Alcian Blue , Connective Tissue/metabolism , Connective Tissue/pathology , Diagnosis, Differential , Female , Gingival Diseases/metabolism , Gingival Diseases/pathology , Histocytochemistry , Humans , Male , Middle Aged , Mouth Diseases/metabolism , Mouth Neoplasms/chemistry , Mouth Neoplasms/diagnosis , Mucins/analysis , Myxoma/chemistry , Myxoma/diagnosis , S100 Proteins/analysis
16.
Eur J Hum Genet ; 10(12): 865-9, 2002 Dec.
Article in English | MEDLINE | ID: mdl-12461695

ABSTRACT

A consanguineous Arab pedigree in which recessive amelogenesis imperfecta (AI) and cone-rod dystrophy cosegregate, was screened for linkage to known retinal dystrophy and tooth abnormality loci by genotyping neighbouring microsatellite markers. This analysis resulted in linkage with a maximum lod score of 7.03 to the marker D2S2187 at the achromatopsia locus on chromosome 2q11, and haplotype analysis placed the gene(s) involved in a 2 cM/5 Mb interval between markers D2S2209 and D2S373. The CNGA3 gene, known to be involved in achromatopsia, lies in this interval but thorough analysis of its coding sequence revealed no mutation. Furthermore, affected individuals in four consanguineous recessive pedigrees with AI but without CRD were heterozygous at this locus, excluding it as a common cause of non-syndromic recessive AI. It remains to be established whether this pedigree is segregating two closely linked mutations causing disparate phenotypes or whether a single defect is causing pathology in both teeth and eyes.


Subject(s)
Amelogenesis Imperfecta/genetics , Chromosomes, Human, Pair 2/genetics , Genes, Recessive/genetics , Retinitis Pigmentosa/genetics , Base Sequence , Chromosome Mapping , Cyclic Nucleotide-Gated Cation Channels , DNA Mutational Analysis , Female , Humans , Ion Channels/genetics , Lod Score , Male , Molecular Sequence Data , Pedigree
17.
J Oral Pathol Med ; 31(8): 500-3, 2002 Sep.
Article in English | MEDLINE | ID: mdl-12220359

ABSTRACT

An unusual case of an odontogenic cyst with verrucous proliferation is described in a 13-year-old girl. This histologically distinctive odontogenic cyst variant does not appear to have been reported previously. The cyst was characterised by a series of verrucous projections in the lumen with hypergranulosis and cells resembling koilocytes, raising the possibility of a viral aetiology. However, no evidence of human papillomavirus (HPV) was found using immunohistochemistry and polymerase chain reaction (PCR) amplification.


Subject(s)
Maxillary Diseases/pathology , Odontogenic Cysts/pathology , Adolescent , Cell Division , Epithelial Cells/pathology , Female , Humans , Hyperplasia , Keratins/analysis , Mitosis , Papillomaviridae/isolation & purification , Warts/pathology
18.
Ann R Australas Coll Dent Surg ; 16: 60-2, 2002 Oct.
Article in English | MEDLINE | ID: mdl-14507135

ABSTRACT

This paper discusses recent advances in electronic information, with particular reference to Oral Medicine and Oral Pathology. Email has become the norm for professional communication; Medline is freely accessible; content alerts can be established to alert the subscriber to new publications; evidence-based practice is emerging with the development of the Cochrane library and numerous other databases are also available for a variety of purposes. Conferences are moving to use electronic information as the medium for dissemination of proceedings. Bulletin boards provide a forum for interchange of ideas and opinions in both Oral Medicine and Oral Pathology and electronic data transfer can be used in various applications in telemedicine, telepathology and teleradiology. Without doubt these mechanisms will be further developed and refined in the present century.


Subject(s)
Medical Informatics , Oral Medicine , Pathology, Oral , Congresses as Topic , Databases as Topic , Electronic Mail , Humans , Information Dissemination , Internet , MEDLINE , Telemedicine
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