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1.
Nutrients ; 13(8)2021 Aug 16.
Article in English | MEDLINE | ID: mdl-34444963

ABSTRACT

We report the effects of mixed omega-7 fatty acid supplementation on changes in serum hsCRP, TNFα, and IL-6 levels and self-reported outcomes in people with non-specific chronic musculoskeletal discomfort. DESIGN: A double-blind, placebo-controlled, 1:1 randomized single crossover trial composed of 688 mg/day palmiteolate for the verum and an equivalent amount of medium-chain triglycerides for the placebo. METHOD: Data were analyzed in two independent groups and as a crossover group. RESULTS: From 211 screened participants in 2017-2019, 56 were randomized. Six participants dropped out and fifty completers contributed to the statistical analyses. At baseline, none of the investigated biomarkers were significantly correlated to subjectively assessed musculoskeletal discomfort levels. For the two-group analysis (n = 26 and n = 24), none of the serum biomarkers reached statistical significance; however, a statistically significant placebo effect was found in the subjective outcomes. CONCLUSION: For the crossover analysis (n = 50), three weeks of supplementation with n7FA containing 688 mg per day of palmiteolate did not reduce serum inflammatory biomarkers nor did it improve subjectively measured quality of life (QoL) compared to placebo. Future studies should explore appropriate biomarkers, sufficient power, length of dosing, inclusion criteria for volunteers with higher BMI, and the verification of cis-palmiteolate versus trans-palmiteolate.


Subject(s)
Dietary Supplements , Fatty Acids, Unsaturated/pharmacology , Inflammation , Adult , Aged , Biomarkers/blood , C-Reactive Protein/analysis , Cross-Over Studies , Double-Blind Method , Female , Humans , Inflammation/blood , Inflammation/metabolism , Interleukin-6/blood , Male , Middle Aged , Placebos , Tumor Necrosis Factor-alpha/blood
2.
J Multidiscip Healthc ; 12: 925-934, 2019.
Article in English | MEDLINE | ID: mdl-31819467

ABSTRACT

OBJECTIVES: Dispositional humility in professionals is a character trait that allows one to monitor self-centered occupational drive and to pay attention to the needs of other professionals. The aim of this study is to test whether or not clinicians working in interprofessional team care environments identify the character trait of humility as an important factor for successful collaborative relationships. This study aimed to revise a concept map of dispositional humility created through literature review. DESIGN: An explanatory sequential mixed-methods study was composed of the HEXACO personality test and the Integrative Medicine Attitude Questionnaire, followed by summative and directed content analyses of one-on-one interview data in order to identify the element of dispositional humility. SETTING: In the State of Washington, USA, where physicians (MD/DO), nurse practitioners (NP) and naturopathic clinicians (ND) serve Medicaid patients in community clinics. PARTICIPANTS: 6 MDs, 4 NPs, and 11 NDs. RESULTS: Twenty-one primary care clinicians were enrolled. Fifteen clinicians completed the interview. It was observed that the: 1) honesty-humility trait (p<0.01), conscientiousness (&p<0.01), and openness to experience (p<0.05) domains of primary care clinicians were statistically significantly higher than the reference standards; 2) attitudes toward integrative medicine did not differentiate the different clinician types; and 3) qualitative data supported the component of dispositional humility as a desirable trait in professionals with whom they would like to work. CONCLUSION: To maintain high-quality patient care while working as a team, limiting self-interest while focusing on the needs of others may be necessary and in the best interest of patients. An attitude of accepting the principles of integrative medicine has permeated this sample of primary healthcare workers. Both quantitative and qualitative analyses revealed that humility was viewed as an important character trait for successful interprofessional collaboration. A revised concept map of dispositional humility to enhance collaborative relationships was created.

3.
J Multidiscip Healthc ; 12: 543-554, 2019.
Article in English | MEDLINE | ID: mdl-31410013

ABSTRACT

BACKGROUND: US healthcare consumers increasingly demand more integrative medical care. Collaboration among clinicians trained in different professional disciplines and specialties may require particular character traits and/or training that focus on factors that facilitate effective collaborative work. Dispositional humility may be a factor that balances self-focused desire for recognition with other-focused professional collaboration to serve patients. The objective of this paper is to create a concept map of dispositional humility in healthcare professionals as a factor to enhance collaboration. METHODS: Articles published between 1997 and 2017 were searched using the term "dispositional humility" or titles containing "humility" AND either "leadership," "cultural," "religious," "relational," or "personality." The abstracts were screened for relevance and full articles were located. To strengthen the scientific rigor of qualitative work by systematizing a method of concept analysis, the Walker and Avant's eight-step concept analysis was used. RESULTS: Ninety-five articles were reviewed in the qualitative synthesis, including 82 full-text articles from the original search and 13 full-text articles containing the concepts "empathy," "professionalism" or "openness" identified from references found in the 82 articles. A concept map was created after interpreting the contents of these articles. CONCLUSIONS: Collaboration requires not only professional competency but also positive dispositional factors. Dispositional humility allows clinicians to have an accurate self-assessment, to be open to new ideas, to appreciate the contribution of others, and to develop generosity. Dispositional humility in leaders can facilitate character development of team members and create an environment characterized by fairness and equality, transparency, non-punitive consequences for reporting errors and near-misses, and a safe and encouraging environment. Nonetheless, dispositional humility must be nurtured and developed through professional training because high educational attainment, career and financial success, and busy schedules may lead to a sense of self-importance and entitlement that promotes separation of team members into hierarchies based on professional disciplines and specialties.

4.
eNeuro ; 5(2)2018.
Article in English | MEDLINE | ID: mdl-29756027

ABSTRACT

Transcriptional events leading to outgrowth of neuronal axons have been intensively studied, but the role of translational regulation in this process is not well understood. Here, we use translatome analyses by ribosome pull-down and protein synthesis characterization by metabolic isotopic labeling to study nerve injury and axon outgrowth proteomes in rodent dorsal root ganglia (DRGs) and sensory neurons. We identify over 1600 gene products that are primarily translationally regulated in DRG neurons after nerve injury, many of which contain a 5'UTR cytosine-enriched regulator of translation (CERT) motif, implicating the translation initiation factor Eif4e in the injury response. We further identified approximately 200 proteins that undergo robust de novo synthesis in the initial stages of axon growth. ApoE is one of the highly synthesized proteins in neurons, and its receptor binding inhibition or knockout affects axon outgrowth. These findings provide a resource for future analyses of the role of translational regulation in neuronal injury responses and axon extension.


Subject(s)
Axons/metabolism , Ganglia, Spinal/metabolism , Gene Expression Regulation/genetics , Nerve Regeneration/genetics , Neuronal Outgrowth/genetics , Peripheral Nerve Injuries/genetics , Protein Biosynthesis/genetics , Sensory Receptor Cells/metabolism , Animals , Cell Culture Techniques , Male , Mice , Mice, Inbred C57BL , Proteomics , Rats , Rats, Wistar
5.
Cell Rep ; 18(2): 545-556, 2017 01 10.
Article in English | MEDLINE | ID: mdl-28076796

ABSTRACT

Most ribosomal proteins (RP) are regarded as essential, static components that contribute only to ribosome biogenesis and protein synthesis. However, emerging evidence suggests that RNA-binding RP are dynamic and can influence cellular processes by performing "extraribosomal," regulatory functions involving binding to select critical target mRNAs. We report here that the RP, Rpl22, and its highly homologous paralog Rpl22-Like1 (Rpl22l1 or Like1) play critical, extraribosomal roles in embryogenesis. Indeed, they antagonistically control morphogenesis through developmentally regulated localization to the nucleus, where they modulate splicing of the pre-mRNA encoding smad2, an essential transcriptional effector of Nodal/TGF-ß signaling. During gastrulation, Rpl22 binds to intronic sequences of smad2 pre-mRNA and induces exon 9 skipping in cooperation with hnRNP-A1. This action is opposed by its paralog, Like1, which promotes exon 9 inclusion in the mature transcript. The nuclear roles of these RP in controlling morphogenesis represent a fundamentally different and paradigm-shifting mode of action for RP.


Subject(s)
Morphogenesis , RNA Precursors/genetics , RNA Splicing/genetics , RNA-Binding Proteins/metabolism , Ribosomal Proteins/metabolism , Zebrafish Proteins/metabolism , Animals , Embryo, Mammalian/metabolism , Embryo, Nonmammalian/metabolism , Exons/genetics , Gastrulation/genetics , Gene Expression Regulation, Developmental , Gene Knockdown Techniques , Heterogeneous Nuclear Ribonucleoprotein A1/metabolism , Mice, Inbred C57BL , Morphogenesis/genetics , RNA Precursors/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , RNA-Binding Proteins/genetics , Ribosomal Proteins/genetics , Smad2 Protein/metabolism , Subcellular Fractions/metabolism , Zebrafish/embryology , Zebrafish/genetics , Zebrafish Proteins/genetics
6.
Cell ; 166(1): 181-92, 2016 Jun 30.
Article in English | MEDLINE | ID: mdl-27321671

ABSTRACT

Local mRNA translation mediates the adaptive responses of axons to extrinsic signals, but direct evidence that it occurs in mammalian CNS axons in vivo is scant. We developed an axon-TRAP-RiboTag approach in mouse that allows deep-sequencing analysis of ribosome-bound mRNAs in the retinal ganglion cell axons of the developing and adult retinotectal projection in vivo. The embryonic-to-postnatal axonal translatome comprises an evolving subset of enriched genes with axon-specific roles, suggesting distinct steps in axon wiring, such as elongation, pruning, and synaptogenesis. Adult axons, remarkably, have a complex translatome with strong links to axon survival, neurotransmission, and neurodegenerative disease. Translationally co-regulated mRNA subsets share common upstream regulators, and sequence elements generated by alternative splicing promote axonal mRNA translation. Our results indicate that intricate regulation of compartment-specific mRNA translation in mammalian CNS axons supports the formation and maintenance of neural circuits in vivo.


Subject(s)
Axons/metabolism , Protein Biosynthesis , Proteome/metabolism , Retinal Ganglion Cells/metabolism , Alternative Splicing , Animals , Gene Expression Regulation, Developmental , Mice , Proteome/analysis , RNA, Messenger/analysis , RNA, Messenger/metabolism , Ribosomes/metabolism , Superior Colliculi/metabolism , Synaptic Transmission
7.
Mol Endocrinol ; 28(4): 575-91, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24606126

ABSTRACT

An understanding of the molecular mechanisms by which androgens drive spermatogenesis has been thwarted by the fact that few consistent androgen receptor (AR) target genes have been identified. Here, we addressed this issue using next-generation sequencing coupled with the RiboTag approach, which purifies translated mRNAs expressed in cells that express cyclic recombinase (CRE). Using RiboTag mice expressing CRE in Sertoli cells (SCs), we identified genes expressed specifically in SCs in both prepubertal and adult mice. Unexpectedly, this analysis revealed that the SC-specific gene program is already largely defined at the initiation of spermatogenesis despite the subsequent dramatic maturational changes known to occur in SCs. To identify AR-regulated genes, we generated triple-mutant mice in which the SCs express the RiboTag but lack ARs. RNA sequencing analysis revealed hundreds of SC-expressed AR-regulated genes that had previously gone unnoticed, including suppressed genes involved in ovarian development. Comparison of the SC-enriched dataset with that from the whole testes allowed us to classify genes in terms of their degree of expression in SCs. This revealed that a greater fraction of AR-up-regulated genes than AR-down-regulated genes were expressed predominantly in SCs. Our results also revealed that AR signaling in SCs causes a large number of genes not detectably expressed in SCs to undergo altered expression, thereby providing genome-wide evidence for wide-scale communication between SCs and other cells. Taken together, our results identified novel classes of genes expressed in a hormone-dependent manner in different testicular cell subsets and highlight a new approach to analyze cell type-specific gene regulation.


Subject(s)
Gene Expression Regulation , Genetic Techniques , Genome/genetics , Protein Biosynthesis/genetics , Receptors, Androgen/metabolism , Sertoli Cells/metabolism , Androgens/pharmacology , Animals , Down-Regulation/drug effects , Down-Regulation/genetics , Gene Expression Regulation/drug effects , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Phenotype , RNA, Messenger/genetics , RNA, Messenger/metabolism , Sequence Analysis, RNA , Sertoli Cells/drug effects , Sexual Maturation/genetics , Up-Regulation/drug effects , Up-Regulation/genetics
8.
PLoS One ; 8(6): e66179, 2013.
Article in English | MEDLINE | ID: mdl-23776628

ABSTRACT

Male spermatogenesis is a complex biological process that is regulated by hormonal signals from the hypothalamus (GnRH), the pituitary gonadotropins (LH and FSH) and the testis (androgens, inhibin). The two key somatic cell types of the testis, Leydig and Sertoli cells, respond to gonadotropins and androgens and regulate the development and maturation of fertilization competent spermatozoa. Although progress has been made in the identification of specific transcripts that are translated in Sertoli and Leydig cells and their response to hormones, efforts to expand these studies have been restricted by technical hurdles. In order to address this problem we have applied an in vivo ribosome tagging strategy (RiboTag) that allows a detailed and physiologically relevant characterization of the "translatome" (polysome-associated mRNAs) of Leydig or Sertoli cells in vivo. Our analysis identified all previously characterized Leydig and Sertoli cell-specific markers and identified in a comprehensive manner novel markers of Leydig and Sertoli cells; the translational response of these two cell types to gonadotropins or testosterone was also investigated. Modulation of a small subset of Sertoli cell genes occurred after FSH and testosterone stimulation. However, Leydig cells responded robustly to gonadotropin deprivation and LH restoration with acute changes in polysome-associated mRNAs. These studies identified the transcription factors that are induced by LH stimulation, uncovered novel potential regulators of LH signaling and steroidogenesis, and demonstrate the effects of LH on the translational machinery in vivo in the Leydig cell.


Subject(s)
Leydig Cells/metabolism , RNA, Messenger/genetics , Sertoli Cells/metabolism , Animals , Cell Line , Follicle Stimulating Hormone/metabolism , Immunoprecipitation , Luteinizing Hormone/metabolism , Male , Mice , Reverse Transcriptase Polymerase Chain Reaction
9.
Endocrinology ; 154(8): 2784-94, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23736293

ABSTRACT

Kisspeptin (Kiss1) signaling to GnRH neurons is widely acknowledged to be a prerequisite for puberty and reproduction. Animals lacking functional genes for either kisspeptin or its receptor exhibit low gonadotropin secretion and infertility. Paradoxically, a recent study reported that genetic ablation of nearly all Kiss1-expressing neurons (Kiss1 neurons) does not impair reproduction, arguing that neither Kiss1 neurons nor their products are essential for sexual maturation. We posited that only minute quantities of kisspeptin are sufficient to support reproduction. If this were the case, animals having dramatically reduced Kiss1 expression might retain fertility, testifying to the redundancy of Kiss1 neurons and their products. To test this hypothesis and to determine whether males and females differ in the required amount of kisspeptin needed for reproduction, we used a mouse (Kiss1-CreGFP) that has a severe reduction in Kiss1 expression. Mice that are heterozygous and homozygous for this allele (Kiss1(Cre/+) and Kiss1(Cre/Cre)) have ∼50% and 95% reductions in Kiss1 transcript, respectively. We found that although male Kiss1(Cre/Cre) mice sire normal-sized litters, female Kiss1(Cre/Cre) mice exhibit significantly impaired fertility and ovulation. These observations suggest that males require only 5% of normal Kiss1 expression to be reproductively competent, whereas females require higher levels for reproductive success.


Subject(s)
Kisspeptins/metabolism , Neurons/metabolism , Reproduction/physiology , Signal Transduction/physiology , Animals , Dynorphins/genetics , Female , Fertility/genetics , Fertility/physiology , Gene Expression , Genotype , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Immunohistochemistry , Kisspeptins/genetics , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Mice, Transgenic , Protein Precursors/genetics , Receptors, Neurokinin-3/genetics , Reproduction/genetics , Reverse Transcriptase Polymerase Chain Reaction , Sex Characteristics , Sex Factors , Sexual Maturation/genetics , Sexual Maturation/physiology , Signal Transduction/genetics , Tachykinins/genetics
10.
PLoS One ; 8(3): e58296, 2013.
Article in English | MEDLINE | ID: mdl-23505481

ABSTRACT

The primary transcript of the mammalian Fragile X Mental Retardation-1 gene (Fmr1), like many transcripts in the central nervous system, is alternatively spliced to yield mRNAs encoding multiple proteins, which can possess quite different biochemical properties. Despite the fact that the relative levels of the 12 Fmr1 transcript isoforms examined here vary by as much as two orders of magnitude amongst themselves in both adult and embryonic mouse brain, all are associated with polyribosomes, consistent with translation into the corresponding isoforms of the protein product, FMRP (Fragile X Mental Retardation Protein). Employing the RiboTag methodology developed in our laboratory, the relative proportions of the 7 most abundant transcript isoforms were measured specifically in neurons and found to be similar to those identified in whole brain. Measurements of isoform profiles across 11 regions of adult brain yielded similar distributions, with the exceptions of the hippocampus and the olfactory bulb. These two regions differ from most of the brain in relative amounts of transcripts encoding an alternate form of one of the KH RNA binding domains. A possible relationship between patterns of expression in the hippocampus and olfactory bulb and the presence of neuroblasts in these two regions is suggested by the isoform patterns in early embryonic brain and in cultured neural progenitor cells. These results demonstrate that the relative levels of the Fmr1 isoforms are modulated according to developmental stage, highlighting the complex ramifications of losing all the protein isoforms in individuals with Fragile X Syndrome. It should also be noted that, of the eight most prominent FMRP isoforms (1-3, 6-9 and 12) in mouse, only two have the major site of phosphorylation at Ser-499, which is thought to be involved in some of the regulatory interactions of this protein.


Subject(s)
Brain/metabolism , Fragile X Mental Retardation Protein/genetics , Gene Expression Regulation , Polyribosomes/metabolism , RNA Isoforms , Alternative Splicing , Animals , Brain/embryology , Cells, Cultured , Gene Expression Regulation, Developmental , Gene Order , Male , Mice , Neural Stem Cells/metabolism
11.
Nat Neurosci ; 15(11): 1547-55, 2012 Nov.
Article in English | MEDLINE | ID: mdl-23064379

ABSTRACT

The striatum regulates motor control, reward and learning. Abnormal function of striatal GABAergic medium spiny neurons (MSNs) is believed to contribute to the deficits in these processes that are observed in many neuropsychiatric diseases. The orphan G protein-coupled receptor GPR88 is robustly expressed in MSNs and is regulated by neuropharmacological drugs, but its contribution to MSN physiology and behavior is unclear. We found that, in the absence of GPR88, MSNs showed increased glutamatergic excitation and reduced GABAergic inhibition, which promoted enhanced firing rates in vivo, resulting in hyperactivity, poor motor coordination and impaired cue-based learning in mice. Targeted viral expression of GPR88 in MSNs rescued the molecular and electrophysiological properties and normalized behavior, suggesting that aberrant MSN activation in the absence of GPR88 underlies behavioral deficits and its dysfunction may contribute to behaviors observed in neuropsychiatric disease.


Subject(s)
Cues , Motor Activity/genetics , Neurons/physiology , Receptors, G-Protein-Coupled/deficiency , Analysis of Variance , Animals , Avoidance Learning/physiology , Benzylamines/pharmacology , Biophysics , Cells, Cultured , Chromones/pharmacology , Corpus Striatum/cytology , Electric Stimulation , Embryo, Mammalian , Excitatory Amino Acid Antagonists/pharmacology , Excitatory Postsynaptic Potentials/drug effects , Excitatory Postsynaptic Potentials/genetics , Female , GABA Antagonists/pharmacology , Gene Expression Profiling , Green Fluorescent Proteins/genetics , In Vitro Techniques , Male , Maze Learning/physiology , Mice , Mice, Inbred C57BL , Mice, Transgenic , Mutation/genetics , Neurons/drug effects , Oligonucleotide Array Sequence Analysis , Phosphinic Acids/pharmacology , Receptors, AMPA/genetics , Receptors, AMPA/metabolism , Receptors, GABA-B/genetics , Receptors, GABA-B/metabolism , Rotarod Performance Test , gamma-Aminobutyric Acid/pharmacology
12.
PLoS One ; 6(4): e18772, 2011 Apr 12.
Article in English | MEDLINE | ID: mdl-21533282

ABSTRACT

We employed the Cre recombinase/loxP system to create a mouse line in which PKA activity can be inhibited in any cell-type that expresses Cre recombinase. The mouse line carries a mutant Prkar1a allele encoding a glycine to aspartate substitution at position 324 in the carboxy-terminal cAMP-binding domain (site B). This mutation produces a dominant negative RIα regulatory subunit (RIαB) and leads to inhibition of PKA activity. Insertion of a loxP-flanked neomycin cassette in the intron preceding the site B mutation prevents expression of the mutant RIαB allele until Cre-mediated excision of the cassette occurs. Embryonic stem cells expressing RIαB demonstrated a reduction in PKA activity and inhibition of cAMP-responsive gene expression. Mice expressing RIαB in hepatocytes exhibited reduced PKA activity, normal fasting induced gene expression, and enhanced glucose disposal. Activation of the RIαB allele in vivo provides a novel system for the analysis of PKA function in physiology.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/genetics , Genes, Dominant , Mutation , Alleles , Animals , Cyclic AMP Response Element-Binding Protein/genetics , Embryonic Stem Cells/metabolism , Glucose/metabolism , Integrases/genetics , Mice , Polymerase Chain Reaction
13.
Sci Signal ; 3(104): pe2, 2010 Jan 12.
Article in English | MEDLINE | ID: mdl-20068229

ABSTRACT

Brown adipose tissue (BAT) is rich in mitochondria and can uncouple oxidative phosphorylation to produce heat as a by-product of fatty acid metabolism. This thermogenic effect helps to maintain body temperature and also plays a critical role in energy homeostasis and the regulation of body weight. Both cyclic adenosine monophosphate and cyclic guanosine monophosphate (cGMP) contribute to the intracellular regulation of mitochondrial biogenesis and the differentiation of BAT. New evidence has defined the essential role of the cGMP-dependent protein kinase I in a pathway that modulates the RhoA-ROCK pathway and insulin receptor signaling to elicit BAT differentiation and stimulate thermogenesis.


Subject(s)
Adipose Tissue, Brown/physiology , Energy Metabolism/physiology , Nucleotides, Cyclic/metabolism , Thermogenesis/physiology , Adipose Tissue, Brown/metabolism , Animals , Cyclic AMP/metabolism , Cyclic GMP/metabolism , Cyclic GMP-Dependent Protein Kinase Type I , Cyclic GMP-Dependent Protein Kinases/metabolism , Homeostasis/physiology , Humans , Mitochondria/metabolism , Models, Biological , Receptor, Insulin/physiology , Signal Transduction/physiology , rho-Associated Kinases/metabolism , rhoA GTP-Binding Protein/metabolism
14.
Proc Natl Acad Sci U S A ; 106(51): 21978-83, 2009 Dec 22.
Article in English | MEDLINE | ID: mdl-19959669

ABSTRACT

Macrophages are central mediators of the innate immune system that can be differentiated from monocytes upon exposure to cytokines. While increased cyclic adenosine monophosphate (cAMP) levels are known to inhibit many lipopolysaccharide-elicited macrophage inflammatory responses, the effects of elevated cAMP on monocyte/macrophage differentiation are not as well understood. We show here that during differentiation, cAMP agonists can cause a large increase in the mRNA and protein levels of several of the pro-inflammatory CXCL and CCL chemokines. The cAMP mediator-exchange protein activated by cAMP (Epac) contributes substantially to the increase in these chemokines. These chemokines are known to play an important role in the regulation of immune responses, particularly regarding the pathogenesis of asthma and chronic obstructive pulmonary disorder. We also found that a selective cAMP-degrading phosphodiesterase (PDE) 4 inhibitor can potentiate the chemokine expression elicited by low-dose forskolin or Prostaglandin E2 (PGE(2)). These data suggest that chemokine receptor antagonists administered in conjunction with a PDE4 inhibitor may improve both the efficacy and safety of PDE4-inhibitor therapy for chronic inflammatory disorders.


Subject(s)
Chemokines/metabolism , Cyclic AMP/metabolism , Macrophages/drug effects , Monocytes/cytology , Phosphodiesterase 4 Inhibitors , Phosphodiesterase Inhibitors/pharmacology , Activating Transcription Factor 3/physiology , Chemokines/genetics , Humans , Macrophages/metabolism , Oligonucleotide Array Sequence Analysis , Transcription, Genetic/physiology
15.
Proc Natl Acad Sci U S A ; 106(33): 13939-44, 2009 Aug 18.
Article in English | MEDLINE | ID: mdl-19666516

ABSTRACT

Gene profiling techniques allow the assay of transcripts from organs, tissues, and cells with an unprecedented level of coverage. However, most of these approaches are still limited by the fact that organs and tissues are composed of multiple cell types that are each unique in their patterns of gene expression. To identify the transcriptome from a single cell type in a complex tissue, investigators have relied upon physical methods to separate cell types or in situ hybridization and immunohistochemistry. Here, we describe a strategy to rapidly and efficiently isolate ribosome-associated mRNA transcripts from any cell type in vivo. We have created a mouse line, called RiboTag, which carries an Rpl22 allele with a floxed wild-type C-terminal exon followed by an identical C-terminal exon that has three copies of the hemagglutinin (HA) epitope inserted before the stop codon. When the RiboTag mouse is crossed to a cell-type-specific Cre recombinase-expressing mouse, Cre recombinase activates the expression of epitope-tagged ribosomal protein RPL22(HA), which is incorporated into actively translating polyribosomes. Immunoprecipitation of polysomes with a monoclonal antibody against HA yields ribosome-associated mRNA transcripts from specific cell types. We demonstrate the application of this technique in brain using neuron-specific Cre recombinase-expressing mice and in testis using a Sertoli cell Cre recombinase-expressing mouse.


Subject(s)
Genetic Techniques , RNA, Messenger/metabolism , Ribosomes/metabolism , Animals , Brain/metabolism , Cell Line , Epitopes , Exons , Hemagglutinins/chemistry , Integrases/metabolism , Male , Mice , Mice, Transgenic , Neurons/metabolism , Sertoli Cells/metabolism
16.
Differentiation ; 76(3): 299-309, 2008 Mar.
Article in English | MEDLINE | ID: mdl-17697127

ABSTRACT

Muscle differentiation is controlled by positive and negative signals. While much attention has been placed on proteins that promote muscle formation, the importance of negative regulators has been underemphasized. MBNL3/CHCR belongs to the muscleblind family of Cys3His zinc finger proteins implicated in myotonic dystrophy. MBNL3 is expressed in myoblasts, muscle precursor cells, and during the early stages of myogenesis, but is detected at very low levels in terminally differentiated myotubes. Constitutive expression of MBNL3 inhibits myotube formation and antagonizes myogenin and myosin heavy chain expression. To identify MBNL3 target genes, we compared the expression profile of C2C12 mouse myoblasts that constitutively express MBNL3 with control cells. From the 15,247 genes represented on the DNA microarray, classification by biological function indicated that genes involved in muscle development/contraction and cell adhesion were down-regulated by MBNL3 expression. mRNA and protein levels for the muscle transcription factor MyoD and E-box regulated transcription were reduced in C2C12-MBNL3 expressing cells. We hypothesize that MBNL3 serves to antagonize muscle differentiation by suppressing MyoD expression levels to prevent unwanted myogenic gene transcription. These findings are the first indication that a mammalian muscleblind-like (MBNL) protein plays a regulatory role in muscle differentiation under nonpathogenic conditions.


Subject(s)
Carrier Proteins/physiology , Cell Differentiation , MyoD Protein/physiology , Transcription, Genetic , Animals , Base Sequence , Blotting, Western , Cell Line , DNA Primers , Down-Regulation , Immunohistochemistry , Mice , Oligonucleotide Array Sequence Analysis , Polymerase Chain Reaction , RNA-Binding Proteins
17.
Nat Cell Biol ; 9(4): 415-21, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17369818

ABSTRACT

A-kinase anchoring proteins (AKAPs) control the localization and substrate specificity of cAMP-dependent protein kinase (PKA), tetramers of regulatory (PKA-R) and catalytic (PKA-C) subunits, by binding to PKA-R subunits. Most mammalian AKAPs bind Type II PKA through PKA-RII (ref. 2), whereas dual specificity AKAPs bind both PKA-RI and PKA-RII (ref. 3). Inhibition of PKA-AKAP interactions modulates PKA signalling. Localized PKA activation in pseudopodia of migrating cells phosphorylates alpha4 integrins to provide spatial cues governing cell motility. Here, we report that the alpha4 cytoplasmic domain is a Type I PKA-specific AKAP that is distinct from canonical AKAPs in two ways: the alpha4 interaction requires the PKA holoenzyme, and is insensitive to amphipathic peptides that disrupt most PKA-AKAP interactions. We exploited type-specific PKA anchoring peptides to create genetically encoded baits that sequester specific PKA isoforms to the mitochondria and found that mislocalization of Type I, but not Type II, PKA disrupts alpha4 phosphorylation and markedly inhibits the velocity and directional persistence of cell migration.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/metabolism , Integrin alpha4/metabolism , Animals , Blotting, Western , CHO Cells , Cell Movement , Cells, Cultured , Chromatography, Affinity , Cricetinae , Cricetulus , Cyclic AMP-Dependent Protein Kinase Type II , Cyclic AMP-Dependent Protein Kinases/genetics , Dogs , Female , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Humans , Immunoprecipitation , Integrin alpha4/genetics , Integrin alpha4beta1/genetics , Integrin alpha4beta1/metabolism , Male , Mice , Mice, Inbred C57BL , Microscopy, Fluorescence , Phosphorylation , Protein Binding , Protein Subunits/genetics , Protein Subunits/metabolism , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism
18.
BMC Biochem ; 7: 20, 2006 Aug 04.
Article in English | MEDLINE | ID: mdl-16889664

ABSTRACT

BACKGROUND: Two main genes encoding the catalytic subunits Calpha and Cbeta of cyclic AMP dependent protein kinase (PKA) have been identified in all vertebrates examined. The murine, bovine and human Cbeta genes encode several splice variants, including the splice variant Cbeta2. In mouse Cbeta2 has a relative molecular mass of 38 kDa and is only expressed in the brain. In human and bovine Cbeta2 has a relative molecular mass of 47 kDa and is mainly expressed in lymphoid tissues. RESULTS: We identified a novel 47 kDa splice variant encoded by the mouse Cbeta gene that is highly expressed in lymphoid cells. Cloning, expression, and production of a sequence-specific antiserum and characterization of PKA catalytic subunit activities demonstrated the 47 kDa protein to be a catalytically active murine homologue of human and bovine Cbeta2. Based on the present results and the existence of a human brain-specifically expressed Cbeta splice variant designated Cbeta4 that is identical to the former mouse Cbeta2 splice variant, the mouse splice variant has now been renamed mouse Cbeta4. CONCLUSION: Murine lymphoid tissues express a protein that is a homologue of human and bovine Cbeta2. The murine Cbeta gene encodes the splice variants Cbeta1, Cbeta2, Cbeta3 and Cbeta4, as is the case with the human Cbeta gene.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/genetics , Isoenzymes/genetics , Lymphoid Tissue/enzymology , Spleen/enzymology , Alternative Splicing , Animals , Cattle , Cell Line , Cloning, Molecular , Cyclic AMP-Dependent Protein Kinase Catalytic Subunits , Cyclic AMP-Dependent Protein Kinases/metabolism , Genetic Variation , Humans , Isoenzymes/metabolism , Mice , Molecular Weight , Recombinant Proteins/metabolism , Transfection
19.
J Neurochem ; 98(4): 1302-15, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16800851

ABSTRACT

Treatment of neuronal cells with leukemia inhibitory factor (LIF) results in increased M(2) muscarinic acetylcholine receptor promoter activity. We demonstrate here that multiple promoter elements mediate LIF stimulation of M(2) gene transcription. We identify a LIF inducible element (LIE) in the M(2) promoter with high homology to a cytokine-inducible ACTG-containing sequence in the vasoactive intestinal peptide promoter. Mutagenesis of both a STAT (signal transducers and activators of transcription) element and the LIE in the M(2) promoter is required to attenuate stimulation of M(2) promoter activity by LIF completely. Mobility shift assays indicate that a LIF-stimulated complex binds to a 70 base pair M(2) promoter fragment. Furthermore, a STAT element within this fragment can bind to LIF-stimulated nuclear STAT1 homodimers in vitro. Mutagenesis experiments show that cytokine-stimulated activation of M(2) promoter activity requires tyrosine residues on glycoprotein 130 (gp130) that are also required for both STAT1 and STAT3 activation. Dominant negative STAT1 or STAT3 can block LIF-stimulated M(2) promoter activity. Real-time RT-PCR analysis indicates that LIF-stimulated induction of M(2) mRNA is partially dependent on protein synthesis. These results show that regulation of M(2) gene transcription in neuronal cells by LIF occurs through a complex novel mechanism that is dependent on LIE, STAT and de novo protein synthesis.


Subject(s)
Interleukin-6/pharmacology , Promoter Regions, Genetic/genetics , Receptor, Muscarinic M2/genetics , 3T3 Cells , Animals , Cell Nucleus/metabolism , DNA Primers , Electrophoretic Mobility Shift Assay , Genes, Reporter , Leukemia Inhibitory Factor , Luciferases/genetics , Mice , Mutation/physiology , Promoter Regions, Genetic/drug effects , Protein Binding , Receptor, Muscarinic M2/biosynthesis , Reverse Transcriptase Polymerase Chain Reaction , STAT1 Transcription Factor/genetics , STAT3 Transcription Factor/genetics , Stimulation, Chemical , Transcriptional Activation/drug effects , Tyrosine/metabolism
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