Experimental and theoretical bulk phase diagram and interfacial tension of ouzo.

Ouzo is a well-known drink in Mediterranean countries, with ingredients water, alcohol and trans-anethole oil. The oil is insoluble in water, but completely soluble in alcohol, so when water is added to the spirit, the available alcohol is depleted and the mixture exhibits spontaneous emulsification. This process is commonly known as the louche or ouzo effect. Although the phase boundaries of this archetypal ternary mixture are well known, the properties of coexisting phases have not previously been studied. Here, we present a detailed experimental investigation into the phase behaviour, including tie-lines connecting coexisting phases, determination of the critical point (also called the plait point in ternary systems) and measurements of the surface tension and density for varying alcohol concentrations. Additionally, we present a theory for the thermodynamics and phase diagram of the system. With suitable selection of the interaction parameters, the theory captures nearly all features of the experimental work. This simple model can be used to determine both bulk and non-uniform (e.g. interfacial) properties, paving the way for a wide range of future applications of the model to ternary mixtures in general. We show how our accurate equilibrium phase diagram can be used to provide improved understanding of non-equilibrium phenomena.

Binding potential and wetting behavior of binary liquid mixtures on surfaces.

We present a theory for the interfacial wetting phase behavior of binary liquid mixtures on rigid solid substrates, applicable to both miscible and immiscible mixtures. In particular, we calculate the binding potential as a function of the adsorptions, i.e., the excess amounts of each of the two liquids at the substrate. The binding potential fully describes the corresponding interfacial thermodynamics. Our approach is based on classical density functional theory. Binary liquid mixtures can exhibit complex bulk phase behavior, including both liquid-liquid and vapor-liquid phase separation, depending on the nature of the interactions among all the particles of the two different liquids, the temperature, and the chemical potentials. Here we show that the interplay between the bulk phase behavior of the mixture and the properties of the interactions with the substrate gives rise to a wide variety of interfacial phase behaviors, including mixing and demixing situations. We find situations where the final state is a coexistence of up to three different phases. We determine how the liquid density profiles close to the substrate change as the interaction parameters are varied and how these determine the form of the binding potential, which in certain cases can be a multivalued function of the adsorptions. We also present profiles for sessile droplets of both miscible and immiscible binary liquids.

Dermatofibrosarcoma protuberans: a case report of an abdominal wall mass and review of the literature.

Dermatofibrosarcoma protuberans (DFSP) is a rare, slow-growing malignancy that often presents with an ambiguous clinical presentation due to its nonspecific findings. We present the case of a 41-year-old male who presented with a slow-growing mass on his abdomen that became protuberant and firm, prompting his desire to pursue excision. Upon return of histologic examination, the specimen was noted to be DFSP. DFSP is a rare cutaneous neoplasm that originates from the dermis and invades the underlying tissue creating a classic protuberant appearance. In some cases, chemotherapy and radiation may be indicated based on margins and locations. The sarcoma is notoriously complicated with early recurrence, making the disease process difficult to control. Surgeons should be familiar with this malignancy due to the indication of additional nonsurgical treatments and the necessity for long-term follow-up for surveillance of recurrence.

Syringocystadenoma papilliferum: case series and review of the literature.

Syringocystadenoma papilliferum (SCAP) is a rare, hamartomatous tumor of the apocrine glands, which typically manifests in the head and neck region. We present a case of 60-year-old male with a several-year history of the lesion located on the abdominal wall and a second case of a 58-year-old male with a history of a slow-growing lesion located on the tragus. Despite varying presentations and locations, both patients were identified to have SCAP on pathological evaluation. Appropriate treatments of SCAP range from CO2 laser treatment to surgical excision; we recommend surgical excision due to the risk of malignant transformation.

Complex-tensor theory of simple smectics.

Matter self-assembling into layers generates unique properties, including structures of stacked surfaces, directed transport, and compact area maximization that can be highly functionalized in biology and technology. Smectics represent the paradigm of such lamellar materials - they are a state between fluids and solids, characterized by both orientational and partial positional ordering in one layering direction, making them notoriously difficult to model, particularly in confining geometries. We propose a complex tensor order parameter to describe the local degree of lamellar ordering, layer displacement and orientation of the layers for simple, lamellar smectics. The theory accounts for both dislocations and disclinations, by regularizing singularities within defect cores and so remaining continuous everywhere. The ability to describe disclinations and dislocation allows this theory to simulate arrested configurations and inclusion-induced local ordering. This tensorial theory for simple smectics considerably simplifies numerics, facilitating studies on the mesoscopic structure of topologically complex systems.

Rectangle-triangle soft-matter quasicrystals with hexagonal symmetry.

Aperiodic (quasicrystalline) tilings, such as Penrose's tiling, can be built up from, e.g., kites and darts, squares and equilateral triangles, rhombi- or shield-shaped tiles, and can have a variety of different symmetries. However, almost all quasicrystals occurring in soft matter are of the dodecagonal type. Here we investigate a class of aperiodic tilings with hexagonal symmetry that are based on rectangles and two types of equilateral triangles. We show how to design soft-matter systems of particles interacting via pair potentials containing two length scales that form aperiodic stable states with two different examples of rectangle-triangle tilings. One of these is the bronze-mean tiling, while the other is a generalization. Our work points to how more general (beyond dodecagonal) quasicrystals can be designed in soft matter.

Thermodynamics, formation dynamics, and structural correlations in the bulk amorphous phase of the phase-field crystal model.

We investigate bulk thermodynamic and microscopic structural properties of amorphous solids in the framework of the phase-field crystal (PFC) model. These are metastable states with a non-uniform density distribution, having no long-range order. From extensive numerical simulations, we determine the distribution of free energy density values in varying size amorphous systems and also the point-to-set correlation length, which is the radius of the largest volume of amorphous one can take while still having the particle arrangements within the volume determined by the particle ordering at the surface of the chosen volume. We find that in the thermodynamic limit, the free energy density of the amorphous tends toward a value that has a slight dependence on the initial state from which it was formed-i.e., it has a formation history dependence. The amorphous phase is observed to form on both sides of the liquid linear-stability limit, showing that the liquid to amorphous transition is first order, with an associated finite free energy barrier when the liquid is metastable. In our simulations, this is demonstrated when the noise in the initial density distribution is used to induce nucleation events from the metastable liquid. Depending on the strength of the initial noise, we observe a variety of nucleation pathways, in agreement with previous results for the PFC model, which show that amorphous precursor mediated multi-step crystal nucleation can occur in colloidal systems.

Adenoid Cystic Carcinoma of the Breast: A Case Report.

Adenoid cystic carcinoma (ACC), characterized by proliferating glands and stromal and basement membrane elements, is a tumor most commonly occurring in the salivary glands; very rarely does this tumor present as a primary tumor in the breast. We present the case of a 53-year-old female who presented with a breast mass noted to be concerning on imaging and confirmed to be ACC on biopsy. The mass was amenable to surgical excision with referrals to medical and radiation oncology. Due to the rarity of the disease, there is no consensus regarding the optimal treatment strategy for the pathology, including the use of chemotherapy and radiation. Long-term follow-up is, however, recommended in order to monitor for recurrence.

Effect of Particle Interactions on the Assembly of Drying Colloidal Mixtures.

The effects of particle interactions on the size segregation and assembly of colloidal mixtures during drying were investigated. A cationic surfactant was added to a binary latex/silica colloidal dispersion that has been shown to self-stratify upon drying at room temperature. Atomic force microscopy was used to show that the change in particle interactions due to the presence of surfactants reduced the degree of stratification and, in some cases, suppressed the effect altogether. Colloidal dispersions containing higher surfactant concentrations can undergo a complete morphology change, resulting instead in the formation of armored particles consisting of latex particles coated with smaller silica nanoparticles. To further prove that armored particles are produced and that stratification is suppressed, cross-sectional images were produced with energy-dispersive X-ray spectroscopy and confocal fluorescence microscopy. The growth of armored particles was also measured using dynamic light scattering. To complement this research, Brownian dynamics simulations were used to model the drying. By tuning the particle interactions to make them more attractive, the simulations showed the presence of armored particles, and the size segregation process was hindered. The prevention of segregation also results in enhanced transparency of the colloidal films. Overall, this research proves that there is a link between particle interactions and size segregation in drying colloidal blends and provides a valuable tool to control the assembly of different film architectures using an extremely simple method.

How ice grows from premelting films and water droplets.

Close to the triple point, the surface of ice is covered by a thin liquid layer (so-called quasi-liquid layer) which crucially impacts growth and melting rates. Experimental probes cannot observe the growth processes below this layer, and classical models of growth by vapor deposition do not account for the formation of premelting films. Here, we develop a mesoscopic model of liquid-film mediated ice growth, and identify the various resulting growth regimes. At low saturation, freezing proceeds by terrace spreading, but the motion of the buried solid is conveyed through the liquid to the outer liquid-vapor interface. At higher saturations water droplets condense, a large crater forms below, and freezing proceeds undetectably beneath the droplet. Our approach is a general framework that naturally models freezing close to three phase coexistence and provides a first principle theory of ice growth and melting which may prove useful in the geosciences.

Dynamical Density Functional Theory for the Drying and Stratification of Binary Colloidal Dispersions.

We develop a dynamical density functional theory based model for the drying of colloidal films on planar surfaces. We consider mixtures of two different sizes of hard-sphere colloids. Depending on the solvent evaporation rate and the initial concentrations of the two species, we observe varying degrees of stratification in the final dried films. Our model predicts the various structures described in the literature previously from experiments and computer simulations, in particular the small-on-top stratified films. Our model also includes the influence of adsorption of particles to the interfaces.

Evaporation-driven self-assembly of binary and ternary colloidal polymer nanocomposites for abrasion resistant applications.

We harness the self-assembly of aqueous binary latex/silica particle blends during drying to fabricate films segregated by size in the vertical direction. We report for the first time the experimental drying of ternary colloidal dispersions and demonstrate how a ternary film containing additional small latex particles results in improved surface stability and abrasion resistance compared with a binary film. Through atomic force microscopy (AFM) and energy-dispersive X-ray spectroscopy (EDX), we show that the vertical distribution of filler particles and the surface morphologies of the films can be controlled by altering the evaporation rate and silica volume fraction. We report the formation of various silica superstructures at the film surface, which we attribute to a combination of diffusiophoresis and electrostatic interactions between particles. Brownian dynamics simulations of the final stages of solvent evaporation provide further evidence for this formation mechanism. We show how an additional small latex particle population results in an increased abrasion resistance of the film without altering its morphology or hardness. Our work provides a method to produce water-based coatings with enhanced abrasion resistance as well as valuable insights into the mechanisms behind the formation of colloidal superstructures.

Efficient calculation of phase coexistence and phase diagrams: application to a binary phase-field-crystal model.

We show that one can employ well-established numerical continuation methods to efficiently calculate the phase diagram for thermodynamic systems described by a suitable free energy functional. In particular, this involves the determination of lines of phase coexistence related to first order phase transitions and the continuation of triple points. To illustrate the method we apply it to a binary phase-field-crystal model for the crystallisation of a mixture of two types of particles. The resulting phase diagram is determined for one- and two-dimensional domains. In the former case it is compared to the diagram obtained from a one-mode approximation. The various observed liquid and crystalline phases and their stable and metastable coexistence are discussed as well as the temperature-dependence of the phase diagrams. This includes the (dis)appearance of critical points and triple points. We also relate bifurcation diagrams for finite-size systems to the thermodynamics of phase transitions in the infinite-size limit.

Adaptive stochastic continuation with a modified lifting procedure applied to complex systems.

Many complex systems occurring in the natural or social sciences or economics are frequently described on a microscopic level, e.g., by lattice- or agent-based models. To analyze the states of such systems and their bifurcation structure on the level of macroscopic observables, one has to rely on equation-free methods like stochastic continuation. Here we investigate how to improve stochastic continuation techniques by adaptively choosing the parameters of the algorithm. This allows one to obtain bifurcation diagrams quite accurately, especially near bifurcation points. We introduce lifting techniques which generate microscopic states with a naturally grown structure, which can be crucial for a reliable evaluation of macroscopic quantities. We show how to calculate fixed points of fluctuating functions by employing suitable linear fits. This procedure offers a simple measure of the statistical error. We demonstrate these improvements by applying the approach in analyses of (i) the Ising model in two dimensions, (ii) an active Ising model, and (iii) a stochastic Swift-Hohenberg model. We conclude by discussing the abilities and remaining problems of the technique.

Pattern formation in two-dimensional hard-core/soft-shell systems with variable soft shell profiles.

Hard-core/soft shell (HCSS) particles have been shown to self-assemble into a remarkably rich variety of structures under compression due to the simple interplay between the hard-core and soft-shoulder length scales in their interactions. Most studies in this area model the soft shell interaction as a square shoulder potential. Although appealing from a theoretical point of view, the potential is physically unrealistic because there is no repulsive force in the soft shell regime, unlike in experimental HCSS systems. To make the model more realistic, here we consider HCSS particles with a range of soft shell potential profiles beyond the standard square shoulder form and study the model using both minimum energy calculations and Monte Carlo simulations. We find that by tuning density and the soft shell profile, HCSS particles in the thin shell regime (i.e., shell to core ratio ) can form a large range of structures, including hexagons, chains, squares, rhomboids and two distinct zig-zag structures. Furthermore, by tuning the density and r1/r0, we find that HCSS particles with experimentally realistic linear ramp soft shoulder repulsions can form honeycombs and quasicrystals with 10-fold and 12-fold symmetry. Our study therefore suggests the exciting possibility of fabricating these exotic 2D structures experimentally through colloidal self-assembly.

Rounded Layering Transitions on the Surface of Ice.

Understanding the wetting properties of premelting films requires knowledge of the film's equation of state, which is not usually available. Here we calculate the disjoining pressure curve of premelting films and perform a detailed thermodynamic characterization of premelting behavior on ice. Analysis of the density profiles reveals the signature of weak layering phenomena, from one to two and from two to three water molecular layers. However, disjoining pressure curves, which closely follow expectations from a renormalized mean field liquid state theory, show that there are no layering phase transitions in the thermodynamic sense along the sublimation line. Instead, we find that transitions at mean field level are rounded due to capillary wave fluctuations. We see signatures that true first order layering transitions could arise at low temperatures, for pressures between the metastable line of water-vapor coexistence and the sublimation line. The extrapolation of the disjoining pressure curve above water-vapor saturation displays a true first order phase transition from a thin to a thick film consistent with experimental observations.

Deriving phase field crystal theory from dynamical density functional theory: Consequences of the approximations.

Phase field crystal (PFC) theory is extensively used for modeling the phase behavior, structure, thermodynamics, and other related properties of solids. PFC theory can be derived from dynamical density functional theory (DDFT) via a sequence of approximations. Here, we carefully identify all of these approximations and explain the consequences of each. One approximation that is made in standard derivations is to neglect a term of form ∇·[n∇Ln], where n is the scaled density profile and L is a linear operator. We show that this term makes a significant contribution to the stability of the crystal, and that dropping this term from the theory forces another approximation, that of replacing the logarithmic term from the ideal gas contribution to the free energy with its truncated Taylor expansion, to yield a polynomial in n. However, the consequences of doing this are (i) the presence of an additional spinodal in the phase diagram, so the liquid is predicted first to freeze and then to melt again as the density is increased; and (ii) other periodic structures, such as stripes, are erroneously predicted to be thermodynamic equilibrium structures. In general, L consists of a nonlocal convolution involving the pair direct correlation function. A second approximation sometimes made in deriving PFC theory is to replace L with a gradient expansion involving derivatives. We show that this leads to the possibility of the density going to zero, with its logarithm going to -∞ while being balanced by the fourth derivative of the density going to +∞. This subtle singularity leads to solutions failing to exist above a certain value of the average density. We illustrate all of these conclusions with results for a particularly simple model two-dimensional fluid, the generalized exponential model of index 4 (GEM-4), chosen because a DDFT is known to be accurate for this model. The consequences of the subsequent PFC approximations can then be examined. These include the phase diagram being both qualitatively incorrect, in that it has a stripe phase, and quantitatively incorrect (by orders of magnitude) regarding the properties of the crystal phase. Thus, although PFC models are very successful as phenomenological models of crystallization, we find it impossible to derive the PFC as a theory for the (scaled) density distribution when starting from an accurate DDFT, without introducing spurious artifacts. However, we find that making a simple one-mode approximation for the logarithm of the density distribution lnρ(x) rather than for ρ(x) is surprisingly accurate. This approach gives a tantalizing hint that accurate PFC-type theories may instead be derived as theories for the field lnρ(x), rather than for the density profile itself.

Binding potentials for vapour nanobubbles on surfaces using density functional theory.

We calculate density profiles of a simple model fluid in contact with a planar surface using density functional theory (DFT), in particular for the case where there is a vapour layer intruding between the wall and the bulk liquid. We apply the method of Hughes et al (2015 J. Chem. Phys. 142 074702) to calculate the density profiles for varying (specified) amounts of the vapour adsorbed at the wall. This is equivalent to varying the thickness h of the vapour at the surface. From the resulting sequence of density profiles we calculate the thermodynamic grand potential as h is varied and thereby determine the binding potential as a function of h. The binding potential obtained via this coarse-graining approach allows us to determine the disjoining pressure in the film and also to predict the shape of vapour nano-bubbles on the surface. Our microscopic DFT based approach captures information from length scales much smaller than some commonly used models in continuum mechanics.

Dissecting the Genomic Architecture of Resistance to Eimeria maxima Parasitism in the Chicken.

Coccidiosis in poultry, caused by protozoan parasites of the genus Eimeria, is an intestinal disease with substantial economic impact. With the use of anticoccidial drugs under public and political pressure, and the comparatively higher cost of live-attenuated vaccines, an attractive complementary strategy for control is to breed chickens with increased resistance to Eimeria parasitism. Prior infection with Eimeria maxima leads to complete immunity against challenge with homologous strains, but only partial resistance to challenge with antigenically diverse heterologous strains. We investigate the genetic architecture of avian resistance to E. maxima primary infection and heterologous strain secondary challenge using White Leghorn populations of derived inbred lines, C.B12 and 15I, known to differ in susceptibility to the parasite. An intercross population was infected with E. maxima Houghton (H) strain, followed 3 weeks later by E. maxima Weybridge (W) strain challenge, while a backcross population received a single E. maxima W infection. The phenotypes measured were parasite replication (counting fecal oocyst output or qPCR for parasite numbers in intestinal tissue), intestinal lesion score (gross pathology, scale 0-4), and for the backcross only, serum interleukin-10 (IL-10) levels. Birds were genotyped using a high density genome-wide DNA array (600K, Affymetrix). Genome-wide association study located associations on chromosomes 1, 2, 3, and 5 following primary infection in the backcross population, and a suggestive association on chromosome 1 following heterologous E. maxima W challenge in the intercross population. This mapped several megabases away from the quantitative trait locus (QTL) linked to the backcross primary W strain infection, suggesting different underlying mechanisms for the primary- and heterologous secondary- responses. Underlying pathways for those genes located in the respective QTL for resistance to primary infection and protection against heterologous challenge were related mainly to immune response, with IL-10 signaling in the backcross primary infection being the most significant. Additionally, the identified markers associated with IL-10 levels exhibited significant additive genetic variance. We suggest this is a phenotype of interest to the outcome of challenge, being scalable in live birds and negating the requirement for single-bird cages, fecal oocyst counts, or slaughter for sampling (qPCR).

Dynamical density-functional-theory-based modeling of tissue dynamics: Application to tumor growth.

We present a theoretical framework based on an extension of dynamical density-functional theory (DDFT) for describing the structure and dynamics of cells in living tissues and tumors. DDFT is a microscopic statistical mechanical theory for the time evolution of the density distribution of interacting many-particle systems. The theory accounts for cell-pair interactions, different cell types, phenotypes, and cell birth and death processes (including cell division), to provide a biophysically consistent description of processes bridging across the scales, including describing the tissue structure down to the level of the individual cells. Analysis of the model is presented for single-species and two-species cases, the latter aimed at describing competition between tumor and healthy cells. In suitable parameter regimes, model results are consistent with biological observations. Of particular note, divergent tumor growth behavior, mirroring metastatic and benign growth characteristics, are shown to be dependent on the cell-pair-interaction parameters.