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1.
Nature ; 629(8013): 843-850, 2024 May.
Article in English | MEDLINE | ID: mdl-38658746

ABSTRACT

Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods1,2. A robust understanding of angiosperm evolution is required to explain their rise to ecological dominance. So far, the angiosperm tree of life has been determined primarily by means of analyses of the plastid genome3,4. Many studies have drawn on this foundational work, such as classification and first insights into angiosperm diversification since their Mesozoic origins5-7. However, the limited and biased sampling of both taxa and genomes undermines confidence in the tree and its implications. Here, we build the tree of life for almost 8,000 (about 60%) angiosperm genera using a standardized set of 353 nuclear genes8. This 15-fold increase in genus-level sampling relative to comparable nuclear studies9 provides a critical test of earlier results and brings notable change to key groups, especially in rosids, while substantiating many previously predicted relationships. Scaling this tree to time using 200 fossils, we discovered that early angiosperm evolution was characterized by high gene tree conflict and explosive diversification, giving rise to more than 80% of extant angiosperm orders. Steady diversification ensued through the remaining Mesozoic Era until rates resurged in the Cenozoic Era, concurrent with decreasing global temperatures and tightly linked with gene tree conflict. Taken together, our extensive sampling combined with advanced phylogenomic methods shows the deep history and full complexity in the evolution of a megadiverse clade.


Subject(s)
Fossils , Genomics , Magnoliopsida , Phylogeny , Magnoliopsida/genetics , Magnoliopsida/classification , Genes, Plant/genetics , Genome, Plant/genetics
2.
Mol Phylogenet Evol ; 53(1): 13-22, 2009 Oct.
Article in English | MEDLINE | ID: mdl-19540350

ABSTRACT

We used Amplified Fragment Length Polymorphism markers (AFLP) and breeding system studies to investigate the population structure and reproductive biology of Hypochaeris angustifolia (Asteraceae: Cichorieae). This species is endemic to altiplanos of the Atlas Mountains (Morocco) where it occurs in scattered populations, and it is the sister species to c. 40 species of this genus in South America. PCoA, NJ, and Bayesian clustering, revealed that the populations are very isolated whilst AFLP parameters show that almost all populations have marked genetic divergence. We contend that these features are more in accord with a vicariance origin for the scattered populations of H. angustifolia, rather than establishment by long-distance dispersal. The breeding system studies revealed that H. angustifolia is a self-incompatible species, with low fecundity in natural and in experimental crosses, probably due to a low frequency of compatible phenotypes within and between the populations.


Subject(s)
Amplified Fragment Length Polymorphism Analysis , Asteraceae/genetics , Genetics, Population , Asteraceae/classification , DNA, Plant/genetics , Evolution, Molecular , Fertility/genetics , Genetic Variation , Morocco , Sequence Analysis, DNA
3.
J Colloid Interface Sci ; 226(1): 151-158, 2000 Jun 01.
Article in English | MEDLINE | ID: mdl-11401359

ABSTRACT

Surface chemical characterization of activated composite membranes, which consist of a polyamide/polysulfone support containing different amounts of di-(2-ethylhexyl) phosphoric acid as carrier, was performed by X-ray photoelectron spectroscopy (XPS) in order to obtain information about the nature of the chemical bonding between the carrier and the membrane top layer. XPS spectra of the top layer of the polymeric support (polyamide) show bands in the C 1s, N 1s, O 1s, and P 2p regions. The N 1s and O 1s signals of the polyamide layer were asymmetric and could be deconvoluted in two peaks that correspond to the coexistence of free and hydrogen bonded polyamide. To support this assignment, primary amides such as benzamide and n-butyramide, which can associate themselves forming hydrogen bonding, and a tertiary amide, N-benzoyl morpholine, unable to form hydrogen bonding, were also studied by XPS. The N 1s asymmetric signals of benzamide and n-butyramide were deconvoluted in two peaks due to the coexistence of free and hydrogen bonded species, while the N 1s signal of N-benzoyl morpholine is symmetric and corresponds to the existence of free amide alone. As a result of the addition of di-(2-ethylhexyl) phosphoric acid to the polymeric matrix, the N 1s signal intensities decrease, while the P 2p signal intensities increase with carrier concentration to a maximum corresponding to surface site saturation. Upon acid addition, the polyamide was protonated and an expected chemical shift of the N 1s signal to higher binding energies was observed due to the increase of the positive charge of the nitrogen atom. This type of chemical interaction allows to fix the carrier in the membrane without its complete immobilization. On the other hand, the surface concentration of N and P, determined by XPS, indicates that a concentration of 400 mM of the carrier in the casting solution is sufficient to saturate the surface of the membrane. Copyright 2000 Academic Press.

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