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ACS Nano ; 13(6): 6540-6549, 2019 06 25.
Article in English | MEDLINE | ID: mdl-31179687

ABSTRACT

In-field molecular diagnosis of plant diseases via nucleic acid amplification is currently limited by cumbersome protocols for extracting and isolating pathogenic DNA from plant tissues. To address this challenge, a rapid plant DNA extraction method was developed using a disposable polymeric microneedle (MN) patch. By applying MN patches on plant leaves, amplification-assay-ready DNA can be extracted within a minute from different plant species. MN-extracted DNA was used for direct polymerase chain reaction amplification of plant plastid DNA without purification. Furthermore, using this patch device, extraction of plant pathogen DNA ( Phytophthora infestans) from both laboratory-inoculated and field-infected leaf samples was performed for detection of late blight disease in tomato. MN extraction achieved 100% detection rate of late blight infections for samples after 3 days of inoculation when compared to the conventional gold standard cetyltrimethylammonium bromide (CTAB)-based DNA extraction method and 100% detection rate for all blind field samples tested. This simple, cell-lysis-free, and purification-free DNA extraction method could be a transformative approach to facilitate rapid sample preparation for molecular diagnosis of various plant diseases directly in the field.


Subject(s)
DNA Barcoding, Taxonomic/methods , DNA, Fungal/chemistry , Phytophthora/genetics , Plant Diseases/microbiology , DNA Barcoding, Taxonomic/instrumentation , DNA, Fungal/genetics , Solanum lycopersicum/microbiology , Metagenomics/instrumentation , Metagenomics/methods , Needles , Phytophthora/pathogenicity , Plant Leaves/chemistry , Plant Leaves/microbiology
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