Effectiveness of bio-effectors on maize, wheat and tomato performance and phosphorus acquisition from greenhouse to field scales in Europe and Israel: a meta-analysis.

Biostimulants (Bio-effectors, BEs) comprise plant growth-promoting microorganisms and active natural substances that promote plant nutrient-acquisition, stress resilience, growth, crop quality and yield. Unfortunately, the effectiveness of BEs, particularly under field conditions, appears highly variable and poorly quantified. Using random model meta-analyses tools, we summarize the effects of 107 BE treatments on the performance of major crops, mainly conducted within the EU-funded project BIOFECTOR with a focus on phosphorus (P) nutrition, over five years. Our analyses comprised 94 controlled pot and 47 field experiments under different geoclimatic conditions, with variable stress levels across European countries and Israel. The results show an average growth/yield increase by 9.3% (n=945), with substantial differences between crops (tomato > maize > wheat) and growth conditions (controlled nursery + field (Seed germination and nursery under controlled conditions and young plants transplanted to the field) > controlled > field). Average crop growth responses were independent of BE type, P fertilizer type, soil pH and plant-available soil P (water-P, Olsen-P or Calcium acetate lactate-P). BE effectiveness profited from manure and other organic fertilizers, increasing soil pH and presence of abiotic stresses (cold, drought/heat or salinity). Systematic meta-studies based on published literature commonly face the inherent problem of publication bias where the most suspected form is the selective publication of statistically significant results. In this meta-analysis, however, the results obtained from all experiments within the project are included. Therefore, it is free of publication bias. In contrast to reviews of published literature, our unique study design is based on a common standardized protocol which applies to all experiments conducted within the project to reduce sources of variability. Based on data of crop growth, yield and P acquisition, we conclude that application of BEs can save fertilizer resources in the future, but the efficiency of BE application depends on cropping systems and environments.

Short- and long-term effects of continuous compost amendment on soil microbiome community.

Organic amendment, and especially the use of composts, is a well-accepted sustainable agricultural practice. Compost increases soil carbon and microbial biomass, changes enzymatic activity, and enriches soil carbon and nitrogen stocks. However, relatively little is known about the immediate and long-term temporal dynamics of agricultural soil microbial communities following repeated compost applications. Our study was conducted at two field sites: Newe Ya'ar (NY, Mediterranean climate) and Gilat (G, semi-arid climate), both managed organically over 4 years under either conventional fertilization (0, zero compost) or three levels of compost amendment (20, 40 and 60 m3/ha or 2, 4, 6 L/m2). Microbial community dynamics in the soils was examined by high- and low-time-resolution analyses. Annual community composition in compost-amended soils was significantly affected by compost amendment levels in G (first, second and third years) and in NY (third year). Repeated sampling at high resolution (9-10 times over 1 year) showed that at both sites, compost application initially induced a strong shift in microbial communities, lasting for up to 1 month, followed by a milder response. Compost application significantly elevated alpha diversity at both sites, but differed in the compost-dose correlation effect. We demonstrate higher abundance of taxa putatively involved in organic decomposition and characterized compost-related indicator taxa and a compost-derived core microbiome at both sites. Overall, this study describes temporal changes in the ecology of soil microbiomes in response to compost vs. conventional fertilization.

Maintaining intensive agriculture overlying aquifers using the threshold nitrate root-uptake phenomenon.

Reducing nitrate leaching from agricultural land to aquifers has been a high priority concern for more than a half century. This study presents theory and observations of a threshold concentration of nitrate in the root zone (Cmax), which the leachate concentration increases at higher rates with increasing root-zone nitrate concentration. The value of Cmax is derived both by direct results from container experiments with varying nitrogen (N) fertigation and as a calibration parameter in N-transport models beneath commercial agricultural plots. For five different crops, Cmax ranged between 20 and 45 mg L-1 of NO3 -N derived from experiments and models. However, for lettuce (Lactuca sativa L.), which was irrigated with a large leaching fraction, Cmax could not be defined. In crops irrigated and fertilized in the warm/dry season (corn [Zea mays L.] and citrus), the experiments show a dramatic change in leachate-concentration slope, and simulations reveal a wide range of sensitivity of leachate NO3 -N concentration to Cmax. In annual crops irrigated and fertilized in the cool/wet season (e.g., potato [Solanum tuberosum L.] in a Mediterranean climate), the experiments show a distinct Cmax that is less dramatic than that of the summer-irrigated crops in the container experiment and a smaller impact of Cmax in N-transport models. The simulations show that, for summer-irrigated crops, maintaining fertigation at C < Cmax has a significant effect reducing deep leachate concentrations, whereas for the winter annual crops the simulations revealed no threshold effect. It is suggested that for summer-irrigated crops, fertigation below Cmax robustly serves the co-sustainability of intensive agriculture and aquifer water quality; this is also suggested for winter crops, but the benefits are not robust. For short-season, small root-system crops (e.g., lettuce), efforts should be made to detach the crop from the soil.

CO2 and nitrogen interaction alters root anatomy, morphology, nitrogen partitioning and photosynthetic acclimation of tomato plants.

MAIN CONCLUSION: Nitrogen and CO2 supply interactively regulate whole plant nitrogen partitioning and root anatomical and morphological development in tomato plants. Nitrogen (N) and carbon (C) are the key elements in plant growth and constitute the majority of plant dry matter. Growing at CO2 enrichment has the potential to stimulate the growth of C3 plants, however, growth is often limited by N availability. Thus, the interactive effects of CO2 under different N fertilization rates can affect growth, acclimation to elevated CO2, and yield. However, the majority of research in this field has focused on shoot traits, while neglecting plants' hidden half-the roots. We hypothesize that elevated CO2 and low N effects on transpiration will interactively affect root vascular development and plant N partitioning. Here we studied the effects of elevated CO2 and N concentrations on greenhouse-grown tomato plants, a C3 crop. Our main objective was to determine in what manner the N fertilization rate and elevated CO2 affected root development and nitrogen partitioning among plant organs. Our results indicate that N interacting with the CO2 level affects the development of the root system in terms of the length, anatomy, and partitioning of the N concentration between the roots and shoot. Both CO2 and N concentrations were found to affect xylem size in an opposite manner, elevated CO2 found to repressed, whereas ample N stimulated xylem development. We found that under limiting N and eCO2, the N% increase in the root, while it decreased in the shoot. Under eCO2, the root system size increased with a coordinated decrease in root xylem area. We suggest that tomato root response to elevated CO2 depends on N fertilization rates, and that a decrease in xylem size is a possible underlying response that limits nitrogen allocation from the root into the shoot. Additionally, the greater abundance of root amino acids suggests increased root nitrogen metabolism at eCO2 conditions with ample N.

Impact of treated wastewater on growth, respiration and hydraulic conductivity of citrus root systems in light and heavy soils.

Roots interact with soil properties and irrigation water quality leading to changes in root growth, structure and function. We studied these interactions in an orchard and in lysimeters with clay and sandy loam soils. Minirhizotron imaging and manual sampling showed that root growth was three times lower in the clay relative to sandy loam soil. Treated wastewater (TWW) led to a large reduction in root growth with clay (45-55%) but not with sandy loam soil (<20%). Treated wastewater increased salt uptake, membrane leakage and proline content, and decreased root viability, carbohydrate content and osmotic potentials in the fine roots, especially in clay. These results provide evidence that TWW challenges and damages the root system. The phenology and physiology of root orders were studied in lysimeters. Soil type influenced diameter, specific root area, tissue density and cortex area similarly in all root orders, while TWW influenced these only in clay soil. Respiration rates were similar in both soils, and root hydraulic conductivity was severely reduced in clay soil. Treated wastewater increased respiration rate and reduced hydraulic conductivity of all root orders in clay but only of the lower root orders in sandy loam soil. Loss of hydraulic conductivity increased with root order in clay and clay irrigated with TWW. Respiration and hydraulic properties of all root orders were significantly affected by sodium-amended TWW in sandy loam soil. These changes in root order morphology, anatomy, physiology and hydraulic properties indicate rapid and major modifications of root systems in response to differences in soil type and water quality.

Lower leaf gas-exchange and higher photorespiration of treated wastewater irrigated Citrus trees is modulated by soil type and climate.

Water quality, soil and climate can interact to limit photosynthesis and to increase photooxidative damage in sensitive plants. This research compared diffusive and non-diffusive limitations to photosynthesis as well as photorespiration of leaves of grapefruit trees in heavy clay and sandy soils having a previous history of treated wastewater (TWW) irrigation for >10 years, with different water qualities [fresh water (FW) vs TWW and sodium amended treated wastewater (TWW + Na)] in two arid climates (summer vs winter) and in orchard and lysimeter experiments. TWW irrigation increased salts (Na(+) and Cl(-) ), membrane leakage, proline and soluble sugar content, and decreased osmotic potentials in leaves of all experiments. Reduced leaf growth and higher stomatal and non-stomatal (i.e. mesophyll) limitations were found in summer and on clay soil for TWW and TWW + Na treatments in comparison to winter, sandy soil and FW irrigation, respectively. Stomatal closure, lower chlorophyll content and altered Rubisco activity are probable causes of higher limitations. On the other hand, non-photochemical quenching, an alternative energy dissipation pathway, was only influenced by water quality, independent of soil type and season. Furthermore, light and CO2 response curves were investigated for other possible causes of higher non-stomatal limitation. A higher proportion of non-cyclic electrons were directed to the O2 dependent pathway, and a higher proportion of electrons were diverted to photorespiration in summer than in winter. In conclusion, both diffusive and non-diffusive limitations contribute to the lower photosynthetic performance of leaves following TWW irrigation, and the response depends on soil type and environmental factors.

Nitrate fluxes to groundwater under citrus orchards in a Mediterranean climate: observations, calibrated models, simulations and agro-hydrological conclusions.

Nitrate contamination of groundwater under land used for intensive-agriculture is probably the most worrisome agro-hydrological sustainability problem worldwide. Vadose-zone samples from 0 to 9 m depth under citrus orchards overlying an unconfined aquifer were analyzed for variables controlling water flow and the fate and transport of nitrogen fertilizers. Steady-state estimates of water and NO3-N fluxes to groundwater were found to vary spatially in the ranges of 90-330 mm yr(-1) and 50-220 kg ha(-1) yr(-1), respectively. Calibration of transient models to two selected vadose-zone profiles required limiting the concentration of NO3-N in the solution that is taken up by the roots to 30 mg L(-1). Results of an independent lysimeter experiment showed a similar nitrogen-uptake regime. Simulations of past conditions revealed a significant correlation between NO3-N flux to groundwater and the previous year's precipitation. Simulations of different nitrogen-application rates showed that using half of the nitrogen fertilizer added to the irrigation water by farmers would reduce average NO3-N flux to groundwater by 70%, decrease root nitrogen uptake by 20% and reduce the average pore water NO3-N concentration in the deep vadose zone to below the Israeli drinking water standard; hence this rate of nitrogen application was found to be agro-hydrologically sustainable. Beyond the investigation of nitrate fluxes to groundwater under citrus orchards and the interesting case-study aspects, this work demonstrates a methodology that enables skillful decisions concerning joint sustainability of both the water resource and agricultural production in a common environmental setting.

Microbial activity and organic matter dynamics during 4 years of irrigation with treated wastewater.

The global changes in rainfall frequency and quantity have subjected arid and semi-arid regions to long periods of drought. As this phenomenon corresponds to increasing trend of water shortage, the use of treated wastewater (TWW) has been suggested as an alternative for irrigation of agricultural crops in these areas. The aim of the study was to investigate the short- and middle-term effects of TWW irrigation on the soil microbial activities and organic carbon content. The microbial community activity was measured every 1-3 months for 4 years in a persimmon (Diospyros kaki) orchard. These activities were used here as an indicator for the soil health. The hydrolysis activity (detected by fluorescein diacetate hydrolysis (FDA) assay) increased during the irrigation season and was significantly higher in soils irrigated with TWW compared to those irrigated with freshwater (FW). This activity was also negatively correlated with dissolved organic carbon (DOC) concentrations during the irrigation season, suggesting that the community degraded the DOC in the soils regardless of its origin. The irrigation season was also characterized by an increase in nitrification potential in both TWW- and FW-irrigated soils, which coincided with high concentrations of nitrate (50 mg kg(-1) soil). Overall, there was an increase in all measured activities during the irrigation season, and they were higher in the TWW soils. However, it appears that after each irrigation season, the potential activity of the community returned to levels similar to or even slightly lower than those of FW-irrigated soil during the wet season, suggesting that the periodic irrigation did not significantly change the soil microbial activity.

Effects of manure and cultivation on carbon dioxide and nitrous oxide emissions from a corn field under Mediterranean conditions.

The use of organic residues as soil additives is increasing, but, depending on their composition and application methods, these organic amendments can stimulate the emissions of CO(2) and N(2)O. The objective of this study was to quantify the effects of management practices in irrigated sweet corn (Zea mays L.) on CO(2) and N(2)O emissions and to relate emissions to environmental factors. In a 3-yr study, corn residues (CR) and pasteurized chicken manure (PCM) were used as soil amendments compared with no residue (NR) under three management practices: shallow tillage (ST) and no tillage (NT) under consecutive corn crops and ST without crop. Tillage significantly increased (P < 0.05) CO(2) and N(2)O fluxes in residue-amended plots and in NR plots. Carbon dioxide and N(2)O fluxes were correlated with soil NH(4) concentrations and with days since tillage and days since seeding. Fluxes of CO(2) were correlated with soil water content, whereas N(2)O fluxes had higher correlation with air temperature. Annual CO(2) emissions were higher with PCM than with CR and NR (9.7, 2.9, and 2.3 Mg C ha(-1), respectively). Fluxes of N(2)O were 34.4, 0.94, and 0.77 kg N ha(-1) yr(-1) with PCM, CR, and NR, respectively. Annual amounts of CO(2)-C and N(2)O-N emissions from the PCM treatments were 64 and 3% of the applied C and N, respectively. Regardless of cultivation practices, elevated N(2)O emissions were recorded in the PCM treatment. These emissions could negate some of the beneficial effects of PCM on soil properties.