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1.
Curr Microbiol ; 81(7): 217, 2024 Jun 09.
Article in English | MEDLINE | ID: mdl-38852107

ABSTRACT

The application of enzymes in agricultural fields has been little explored. One potential application of fungal lytic enzymes (chitinases, lipases, and proteases) is as an additive to current biopesticides to increase their efficacy and reduce the time of mortality. For this, a screening of lytic overproducer fungi under submerged fermentation with a chemical-defined medium was performed. Then, the enzymatic crude extract (ECE) was concentrated and partially characterized. This characterization consisted of measuring the enzymatic activity (lipase, protease and, chitinase) and determining the enzyme stability after storage at temperatures of - 80, - 20 and, 4 °C. And lastly, the application of these concentrated enzymatic crude extracts (C-ECE) as an enhancer of spores-based fungal biopesticide was proven. Beauveria were not as good producers of lytic enzymes as the strains from Trichoderma and Metarhizium. The isolate M. robertsii Mt015 was selected for the co-production of chitinases and proteases; and the isolate T. harzianum Th180 for co-production of chitinases, lipases, and proteases. The C-ECE of Mt015 had a protease activity of 18.6 ± 1.1 U ml-1, chitinase activity of 0.28 ± 0.01 U ml-1, and no lipase activity. Meanwhile, the C-ECE of Th180 reached a chitinase activity of 0.75 U ml-1, lipase activity of 0.32 U ml-1, and protease activity of 0.24 U ml-1. Finally, an enhancing effect of the enzymatic extracts of M. robertsii (66.7%) and T. harzianum (43.5%) on the efficacy of B. bassiana Bv064 against Diatraea saccharalis larvae was observed. This work demonstrates the non-species-specific enhancing effect of enzymatic extracts on the insecticidal activity of conidial-based biopesticides, which constitutes a contribution to the improvement of biological control agents' performance.


Subject(s)
Chitinases , Fermentation , Peptide Hydrolases , Chitinases/metabolism , Peptide Hydrolases/metabolism , Animals , Lipase/metabolism , Fungal Proteins/metabolism , Fungal Proteins/genetics , Biological Control Agents/pharmacology , Biological Control Agents/metabolism , Fungi/metabolism , Pest Control, Biological/methods , Beauveria/enzymology , Beauveria/metabolism , Enzyme Stability
2.
Insights Imaging ; 15(1): 153, 2024 Jun 20.
Article in English | MEDLINE | ID: mdl-38900225

ABSTRACT

OBJECTIVE: To evaluate the safety of a minimum continuous positive airway pressure of 4 cmH2O (CPAP + 4) during computed tomography (CT)-guided radiofrequency ablation (RFA) for lung malignancies under procedural sedation and analgesia (PSA). METHODS: This was a prospective, randomised, single-blind, parallel-group, placebo-controlled trial with an open-label medical device conducted at a single tertiary university hospital in Barcelona, Spain. Forty-six patients over 18 years of age scheduled for CT-guided RFA of a malignant pulmonary tumour under PSA were randomised to receive either CPAP + 4 or a modified mask for placebo CPAP (Sham-CPAP). Exclusion criteria included contraindications for RFA, refusal to participate, inability to understand the procedure or tolerate the CPAP test, lung biopsy just prior to RFA, intercurrent diseases, or previous randomisation for additional pulmonary RFA. Primary outcomes were the percentage of patients reporting at least one serious adverse event (SAE), classification for complications from the Cardiovascular and Interventional Radiological Society of Europe (CIRSE), and Clavien-Dindo classifications for complications, hospital stay, and readmissions. Secondary outcomes included adverse events (AEs), respiratory parameters, airway management, and the local radiological efficacy of pulmonary ablation. RESULTS: CPAP + 4 prolonged hospital stay (1.5 ± 1.1 vs. 1.0 ± 0 inpatient nights, p = 0.022) and increased the risk of AE post-RFA (odds ratio (95% CI): 4.250 (1.234 to 14.637), p = 0.021 with more pneumothorax cases (n = 5/22, 22.7% vs. n = 0/24, 0%, p = 0.019). Per-protocol analysis revealed more SAEs and CIRSE grade 3 complications in the CPAP + 4 group (23.5% vs. 0%, p = 0.036). No significant differences were found in the effectiveness of oxygenation, ventilation, or pulmonary ablation. CONCLUSION: CPAP is unsafe during CT-guided RFA for lung cancer under PSA even at the lowest pressure setting. TRIAL REGISTRATION: ClinicalTrials.Gov, ClinicalTrials.gov ID NCT02117908, Registered 11 April 2014, https://www. CLINICALTRIALS: gov/study/NCT02117908 CRITICAL RELEVANCE STATEMENT: This study highlights the hazards of continuous positive airway pressure during radiofrequency ablation of lung cancer, even at minimal pressures, deeming it unsafe under procedural sedation and analgesia in pulmonary interventional procedures. Findings provide crucial insights to prioritise patient safety. KEY POINTS: No prior randomised controlled trials on CPAP safety in percutaneous lung thermo-ablation. Standardised outcome measures are crucial for radiology research. CPAP during lung RFA raises hospital stay and the risk of complications. CPAP is unsafe during CT-guided RFA of lung cancer under procedural sedoanalgesia.

3.
Fungal Biol ; 128(2): 1643-1656, 2024 04.
Article in English | MEDLINE | ID: mdl-38575237

ABSTRACT

Microsclerotia (MS) are considered one of the most promising propagules for use as active ingredients in biopesticides due to their tolerance to abiotic factors and ability to produce infective conidia for the control of pests. Therefore, the objective of this research was to establish the conditions required to induce the formation of microsclerotia in Metarhizium robertsii Mt004 and to study its development process, tolerance to abiotic factors and insecticidal activity of MS-derived conidia. M. robertsii started to form hyphal aggregates after 2 days and looked more compact after 8 days. MS were mature and pigmented after 20 days. The final yield was 2.0 × 103 MS/mL and MS size varied between 356.9 and 1348.4 µm. Ultrastructure analysis revealed that mature MS contained only a few live cells embedded in an extracellular matrix. Mature MS were more tolerance to UV-B radiation, heat and storage trials than conidia from Solid State Fermentation. MS-derived conidia were as virulent as conidia against Diatraea saccharalis larvae. These results showed that MS are promising propagules for the development of more persistent and efficient biopesticides for harsh environmental conditions. Our findings provide a baseline for production and a better understanding of microsclerotia development in M. robertsii strains.


Subject(s)
Insecticides , Metarhizium , Insecticides/pharmacology , Biological Control Agents , Culture Media/chemistry , Spores, Fungal , Pest Control, Biological/methods
5.
Rev. colomb. biotecnol ; 24(2): 59-67, jul.-dic. 2022. tab, graf
Article in Spanish | LILACS-Express | LILACS | ID: biblio-1423775

ABSTRACT

RESUMEN El ARN de interferencia (ARNi) es un mecanismo evolutivamente conservado en la mayoría de las células eucariotas que permite silenciar genes mediante la degradación de ARN mensajero (ARNm) y la supresión de la síntesis de proteínas. En plantas, las moléculas de ARNi están involucradas en mecanismos de defensa contra patógenos y transposones, en la respuesta adaptativa al estrés, y en la expresión de genes relacionados con su crecimiento. El ARNi se considera una herramienta biotecnológica eficaz para silenciar la expresión de genes de microorganismos fitopatógenos, esto permite el diseño de bioplaguicidas ambientalmente seguros con una afinidad y selectividad, en muchos casos superior a la de los plaguicidas químicos. En esta revisión se señalan los últimos avances en la aplicación del ARNi en el contexto agrícola y su efectividad en el control biológico de fitopatógenos e insectos plaga. Asimismo, se presentan diversos ensayos experimentales cuyos resultados pueden ser la base para futuros bioproductos, además de algunos ejemplos disponibles en el mercado. Por último, se abordan aspectos de bioseguridad y consideraciones regulatorias necesarias para la aceptación y uso de esta tecnología a nivel global.


ABSTRACT RNA interference (RNAi) is an evolutionarily conserved mechanism in most eukaryotic cells that allows genes to be silenced by degradation of messenger RNA (mRNA) and suppression of protein synthesis. In plants, RNAi molecules are involved in defense mechanisms against pathogens and transposons, in the adaptive response to stress, and in the expression of genes related to their growth. RNAi is an effective biotechnological tool to silence the expression of specific genes which are essential for the survival of phytopathogenic microorganisms, thus allowing the design of environmentally safe biopesticides with affinity and selectivity, in many cases greater than chemical pesticides. This review describes the latest advances in the application of RNAi in the agricultural context and its effectiveness in the biological control of phytopathogens and pest insects. Likewise, various experimental trials are presented, the results of which may be the basis for future bioproducts, as well as some examples available on the market. Finally, biosafety aspects and regulatory considerations necessary for the acceptance and use of this technology at a global level are presented.

6.
Viruses ; 13(12)2021 12 15.
Article in English | MEDLINE | ID: mdl-34960789

ABSTRACT

Spodoptera ornithogalli (Guenée) (Lepidoptera: Noctuidae) is an important pest in different crops of economic relevance in America. For its control, strategies that include chemicals are usually used; so, the description of entomopathogens would be very useful for the formulation of biopesticides. In this regard, two different baculoviruses affecting S. ornithogalli were isolated in Colombia, with one of them being an NPV and the other a GV. Ultrastructural, molecular, and biological characterization showed that both isolates possess the 38 core genes and are novel species in Baculoviridae, named as Spodoptera ornithogalli nucleopolyhedrovirus (SporNPV) and Spodoptera ornithogalli granulovirus (SporGV). The bioassays carried out in larvae of S. ornithogalli and S. frugiperda showed infectivity in both hosts but being higher in the first. In addition, it was observed that SporGV potentiates the insecticidal action of SporNPV (maximum value in ratio 2.5:97.5). Both viruses are individually infective but coexist in nature, producing mixed infections with a synergistic effect that improves the performance of the NPV and enables the transmission of the GV, which presents a slowly killing phenotype.


Subject(s)
Baculoviridae , Coinfection/virology , Larva/virology , Spodoptera/virology , Animals , Baculoviridae/genetics , Biological Control Agents , Colombia , Disease Models, Animal , Granulovirus/classification , Granulovirus/genetics , Insecticides , Moths/virology , Nucleopolyhedroviruses , Pest Control, Biological , Phylogeny
7.
Mycology ; 12(4): 261-278, 2021.
Article in English | MEDLINE | ID: mdl-34900381

ABSTRACT

The fungal species Metarhizium novozealandicum, that occurs only in New Zealand and Australia has been poorly studied.  In this work, a new strain of M. novozealandicum isolated from a larva of Wiseana sp. is described based on morphology, genomic multilocus (ITS, EF-1α and ß-tubulin) phylogeny, growth in different culture media and insecticidal activity. The isolate AgR-F177 was clustered in the same clade with M. novozealandicum. AgR-F177 colonies developed faster on Sabouraud Dextrose Agar (SDA) than on Potato Dextrose Agar (PDA) when incubated at 25°C, with no growth observed at 30°C on either media. Conidia yield on an oat-based medium in semisolid fermentation was 7.41 x 108conidia/g of substrate and a higher yield of 1.68 x 109conidia/g of substrate was obtained using solid fermentation on cooked rice. AgR-F177 formed microsclerotia (MS) in liquid fermentation after 7 days reaching the maximum yield of 3.3 × 103 MS/mL after 10 days. AgR-F177 caused mortality in Wiseana copularis, Costelytra giveni and Plutella xylostella larvae with efficacies up to 100%, 69.2%, and 45.7%, respectively. The ease of production of AgR-F177 with different fermentation systems and its pathogenicity against different insect pests reveal its potential as a new biopesticide.

8.
Heliyon ; 6(12): e05713, 2020 Dec.
Article in English | MEDLINE | ID: mdl-33364489

ABSTRACT

Food security is among the most pressing global concerns. It is principally threatened by the combination of rural migration and the pressure of climate change. In order to mitigate these effects, the need to promote stable conditions for small producers -who generate 80% of the world's food- has arose. In search to improve market conditions, this study aims to evaluate the feasibility of cross-hedging between electrical derivatives market and spot agricultural products in Colombia. This hypothesis is proposed, as Colombia depends upon hydro-electricity, an electricity source which is heavily influenced by climatic conditions, particularly the "El Niño" southern oscillation (ENSO). The prices of agricultural products are thus volatile, and subject to this phenomenon. ENSO is presumed to be an important link between these two markets. To contrast the hypothesis, the most commonly- methods in cross-hedging literature were employed to estimate hedge ratios: OLS, Error Correction Models, and GARCH estimations. This last estimation was found to be the one with the best performance for hedge ratio estimation. Despite this, of 93 products analyzed, statistically significant relationships were found for only nine. Besides, it was found that cross-hedging contributes to a risk reduction of not more than 32%.

9.
Mycology ; 12(2): 105-118, 2020 Apr 27.
Article in English | MEDLINE | ID: mdl-34026302

ABSTRACT

Beauveria pseudobassiana formed three-dimensional aggregates of cells (CAs) in liquid culture. CAs were formed mainly by blastospores and conidia, distinct from microsclerotia formed through adhesion of hyphae. The formation, germination and sporulation of CAs were studied, as well as the pathogenicity of conidia produced from them against adults of black beetle. After 4 days of culture, CAs were formed, becoming compact and melanised after 10 days of incubation. Electron microscopy showed three-dimensional CAs averaging 431.65 µm in length with irregular shapes and rough surfaces, where cells were trapped within an extracellular matrix. CAs germinated after 2 days of incubation on agar-plates producing hyphae and forming phialides and conidia after 4 days. Produced conidia caused 45% mortality of black beetle adults. CAs germination and sporulation on soil were directly correlated with soil moisture, reaching 80% and 100% germination on the surface of soil with 17% and 30% moisture, respectively. CAs maintained 100% germination after 2 years of storage under refrigeration. These CAs could have a similar function as microsclerotia in nature, acting as resistant structures able to protect internal cells and their ability to sporulate producing infective conidia, suggesting their potential to be used as bioinsecticides to control soil-dwelling insects.

10.
Pest Manag Sci ; 75(5): 1391-1399, 2019 May.
Article in English | MEDLINE | ID: mdl-30414258

ABSTRACT

BACKGROUND: The hornworn Erinnyis ello is the major pest of natural rubber crops in Colombia, mainly controlled using toxic chemical insecticides. The use of E. ello Betabaculovirus is an environmentally sustainable alternative for its control. The aim of the present work was to characterize a prototype biopesticide formulation and evaluate its efficacy under different conditions. RESULTS: Quality control evaluations of formulated biopesticide revealed that all the parameters evaluated were under the permissible level. The lethal concentrations LC50 and LC90 of the biopesticide were 4.3 × 103 and 5.5 × 104 occlusion bodies (OBs) mL-1 , respectively. Biopesticide efficacies against second and fourth instar larvae under greenhouse conditions were higher than 80%. Evaluation of two application rates in a clonal garden resulted in 84% and 88% efficacy, comparable to that obtained with the chemical. The biopesticide in a commercial plantation showed efficacies between 74% and 82%. Biopesticide post-application persistence was estimated at least in 1 week under field natural conditions. Results allowed selection of the lowest evaluated dose (1 × 1011 OBs ha-1 ) as the basis for further field evaluations. CONCLUSION: Formulated ErelGV showed high efficacy to control the hornworm in rubber crops and high potential to be included in integrated pest management programs, thus it could be an interesting alternative to replace agrochemicals. © 2018 Society of Chemical Industry.


Subject(s)
Baculoviridae/physiology , Hevea , Moths/virology , Pest Control, Biological/methods , Animals , Environment, Controlled , Laboratories , Quality Control
11.
PLoS One ; 12(9): e0184053, 2017.
Article in English | MEDLINE | ID: mdl-28873431

ABSTRACT

Diatraea spp. (Lepidoptera: Crambidae) are a group of insects that are agriculture pests in many economically relevant crops such as sugarcane, sorghum, corn and rice. Recognized species for this genus respond differentially to natural enemies used in their biological control, emphasizing the importance of species in a regional approach. Currently, identification is based on the male genitalia. However, the availability of specimens collected from field and subjectivity based on the character recognition can seriously hamper species identification, and therefore result in inadequate pest management. To overcome this, individuals of Diatraea spp. preliminarily classified male genitalia and obtained from reared conditions and the field (both derived from natural populations occurring in Colombia) were analyzed using genitalic morphometry and molecular biology specifically using a fragment of the cytochrome oxidase subunit II (CO II) mitochondrial gene. Although morphometric analysis did not show any overriding results regarding genitalia morphology, the bioinformatics analyses of CO II sequences resulted in an adequate classification of the individuals within the recognized species. It also, revealed that the occurrence of clades associated with geographical distribution may be associated with cryptic species. The latter was also confirmed by a Single-Strand Conformation Polymorphism (SSCP) methodology evaluating the same fragment of CO II. This experimental approach allows properly recognizing each species and in consequence is proposed as an effective tool in Diatraea species identification.


Subject(s)
Electron Transport Complex IV/genetics , Lepidoptera/enzymology , Animals , DNA, Single-Stranded/chemistry , Genitalia, Male/anatomy & histology , Lepidoptera/anatomy & histology , Male , Nucleic Acid Conformation , Nucleotides/genetics , Phylogeny , Polymerase Chain Reaction , Polymorphism, Single-Stranded Conformational , Restriction Mapping , Sequence Analysis, DNA , Species Specificity
12.
Rev. colomb. biotecnol ; 18(2): 24-31, jul.-dic. 2016. ilus, tab
Article in Spanish | LILACS | ID: biblio-959836

ABSTRACT

El uso de baculovirus como agentes de control biológico de insectos plaga, se ha convertido en una estrategia efectiva que se ha implementado gradualmente en diferentes sistemas productivos a nivel mundial. Para el desarrollo de un bioplaguicida a base de baculovirus, es necesario contar con una metodología para determinar el título viral en el producto en proceso y terminado. Para tal fin, en este trabajo se diseñó y optimizó una técnica de cuantificación viral (Betabaculovirus) mediante PCR cuantitativo (q-PCR). Se utilizó una sonda TaqMan diseñada sobre el gen de granulina, altamente conservado. Para la técnica de q-PCR se determinó la especificidad, sensibilidad y reproducibilidad, encontrando que puede detectar y cuantificar aislamientos del género Betabaculovirus provenientes de cinco especies diferentes de insectos (granulovirus de Tecia solanivora, Phthorimaea operculella,Erinnyis ello, Tuta absoluta y Spodoptera frugiperda) incluso de diferente origen geográfico, pero no detecta aislamientos del género Alphabaculovirus (nucleopoliedrovirus de Spodoptera ornithogalli, Diatraea saccharalis o S. frugiperda). El límite mínimo de detección de la técnica fue de 6,4 x 10-4 ng de ADN, lo que equivale a 1,25 x 10(5) copias del gen. Así mismo, la variación intra e inter ensayos fue mínima, demostrando la reproducibilidad de la misma. La aplicabilidad de la técnica fue evaluada para la detección de granulovirus en muestras de larva, suelo, y para determinar la concentración viral en un bioplaguicida formulado como concentrado emulsionable. En conclusión, la técnica de q-PCR desarrollada fue reproducible, sensible y específica, con aplicabilidad en estudios de persistencia viral en campo, control de infecciones en crías de insectos y control de calidad de bioplaguicidas a base de betabaculovirus.


The use of baculovirus as a biocontrol agent is an effective strategy, which has been gradually implemented in different production systems worldwide. For the development of a biopesticide based on baculovirus, it is necessary to have a methodology to determine the viral concentration in the process and in the finished product. In this study, a technique for viral quantification by quantitative PCR (q-PCR) was designed and optimized; therefore we used a TaqMan probe designed on granulin gene which is highly conserved. The specificity, sensitivity and reproducibility of the technique were determined. The q-PCR was able to detect and quantify isolates from the genus Betabaculovirus from five different insects species (granulovirus from Tecia solanivora, Phthorimaea operculella, Erinnys ello, Tuta absoluta and Spodoptera frugiperda) even from different geographic origins, while other isolates of baculovirus as from the genus Alphabaculovirus (nucleopolyhedrovirus from Spodoptera ornithogalli, Diatraea saccharallis or S. frugiperda) were not detected. The minimum detection limit of the technique was 6.4 x 10-4 ng /µl of DNA, equivalent to 1.25 x 10³ gene copies. Additionally, intra- and inter-assays variation was minimal, demonstrating the reproducibility of technique. The applicability of the technique was evaluated for detecting granulovirus from samples of larva and soil, and to determine the virus concentration in the biopesticide formulated as emulsifiable concentrate. In conclusion, quantitative PCR was a technique reproducible, sensitive and specific to allow viral persistence studies in field, viral infection control in rearing and quality control of a biopesticide based on betabaculovirus.

13.
BMC Genomics ; 16: 1008, 2015 Nov 25.
Article in English | MEDLINE | ID: mdl-26607569

ABSTRACT

BACKGROUND: Baculoviruses are insect-associated viruses carrying large, circular double-stranded-DNA genomes with significant biotechnological applications such as biological pest control, recombinant protein production, gene delivery in mammals and as a model of DNA genome evolution. These pathogens infect insects from the orders Lepidoptera, Hymenoptera and Diptera, and have high species diversity which is expressed in their diverse biological properties including morphology, virulence or pathogenicity. Spodoptera frugiperda (Lepidoptera: Noctuidae), the fall armyworm, represents a significant pest for agriculture in America; it is a host for baculoviruses such as the Spodoptera frugiperda multiple nucleopolyhedrovirus (SfMNPV) (Colombia strain, genotype A) having been classified as a Group II alphabaculovirus making it a very attractive target for bioinsecticidal use. RESULTS: Genome analysis by pyrosequencing revealed that SfMNPV ColA has 145 ORFs, 2 of which were not present in the other sequenced genotypes of the virus (SfMNPV-NicB, SfMNPV-NicG, SfMNPV-19 and SfMNPV-3AP2). An in-depth bioinformatics study showed that ORF023 and ORF024 were acquired by a recent homologous recombination process between Spodoptera frugiperda and Spodoptera litura (the Oriental leafworm moth) nucleopolyhedroviruses. Auxiliary genes are numerous in the affected locus which has a homologous region (hr3), a repetitive sequence associated with genome replication which became lost in SfColA along with 1 ORF. Besides, the mRNAs associated with two acquired genes appeared in the virus' life-cycle during the larval stage. Predictive studies concerning the theoretical proteins identified that ORF023 protein would be a phosphatase involved in DNA repair and that the ORF024 protein would be a membrane polypeptide associated with cell transport. CONCLUSIONS: The SfColA genome was thus revealed to be a natural recombinant virus showing evidence of recent horizontal gene transfer between different baculovirus species occurring in nature. This feature could be the cause of its high insecticidal power and therefore SfColA becomes a great candidate for bioinsecticide formulations.


Subject(s)
Gene Transfer, Horizontal , Nucleopolyhedroviruses/genetics , Spodoptera/genetics , Spodoptera/virology , Animals , Computational Biology/methods , Gene Expression Regulation, Viral , Gene Order , Genes, Viral , Genome, Viral , Genomics , Insect Control , Nucleopolyhedroviruses/classification , Open Reading Frames , Phylogeny
14.
Viruses ; 7(1): 394-421, 2015 Jan 20.
Article in English | MEDLINE | ID: mdl-25609309

ABSTRACT

Spodoptera frugiperda (Lepidoptera: Noctuidae) is a major pest in maize crops in Colombia, and affects several regions in America. A granulovirus isolated from S. frugiperda (SfGV VG008) has potential as an enhancer of insecticidal activity of previously described nucleopolyhedrovirus from the same insect species (SfMNPV). The SfGV VG008 genome was sequenced and analyzed showing circular double stranded DNA of 140,913 bp encoding 146 putative ORFs that include 37 Baculoviridae core genes, 88 shared with betabaculoviruses, two shared only with betabaculoviruses from Noctuide insects, two shared with alphabaculoviruses, three copies of own genes (paralogs) and the other 14 corresponding to unique genes without representation in the other baculovirus species. Particularly, the genome encodes for important virulence factors such as 4 chitinases and 2 enhancins. The sequence analysis revealed the existence of eight homologous regions (hrs) and also suggests processes of gene acquisition by horizontal transfer including the SfGV VG008 ORFs 046/047 (paralogs), 059, 089 and 099. The bioinformatics evidence indicates that the genome donors of mentioned genes could be alpha- and/or betabaculovirus species. The previous reported ability of SfGV VG008 to naturally co-infect the same host with other virus show a possible mechanism to capture genes and thus improve its fitness.


Subject(s)
Baculoviridae/genetics , DNA, Viral/chemistry , DNA, Viral/genetics , Genome, Viral , Spodoptera/virology , Animals , Baculoviridae/isolation & purification , Colombia , DNA/chemistry , DNA/genetics , DNA, Circular/chemistry , DNA, Circular/genetics , Gene Transfer, Horizontal , Molecular Sequence Annotation , Molecular Sequence Data , Open Reading Frames , Recombination, Genetic , Sequence Analysis, DNA , Sequence Homology , Virulence Factors/genetics
15.
Rev. colomb. biotecnol ; 16(2): 129-140, jul.-dic. 2014. ilus, tab
Article in Spanish | LILACS | ID: lil-731740

ABSTRACT

El gusano cachón Erinnyis ello (L.) es una plaga polífaga que puede causar graves pérdidas en cultivos de caucho. El uso de granulovirus representa una alternativa interesante para el control biológico de este insecto. Tres aislamientos colombianos del granulovirus de E. ello (EeGV) recuperados en larvas de campo, fueron caracterizados morfológica y molecularmente. Los cuerpos de inclusión de los tres aislamientos presentaron forma ovoide con una única nucleocápside, con tamaño promedio de 302,9 ± 22 x 181,5 ± 16 nm. El análisis de los perfiles de restricción con diferentes endonucleasas no mostró diferencias entre los tres aislamientos, lo cual sugiere que son muestras de la misma cepa viral, denominada VG010, cuyo tamaño del genoma se estimó en 88,7 Kb. El análisis de las relaciones filogenéticas basado en las secuencias de lef-8, lef-9 y gran mostró con alta consistencia la estrecha relación entre VG010 y un aislamiento de EeGV (M34-4) previamente descrito, lo cual sugiere que son variantes genotípicas de la misma especie viral. La eficacia del aislamiento VG010 en condiciones de laboratorio sobre larvas de segundo y cuarto estadio fue de 100 % y 64 % respectivamente, mientras que la concentración letal media (CL50) fue 4,3 x 103 CI/mL. La productividad viral, osciló entre 2,1 x 109 y 3,8 x 109 CI/gramo de larva. Estos resultados representan la base para el desarrollo de un nuevo bioinsecticida para el control de la plaga en campo.


Erinnyis ello (L.) is a polyphagous lepidopteran pest that may cause serious annual losses in the rubber industry. The use of granulovirus represents an interesting alternative as a biological control agent for this insect. Three Colombian isolates of granulovirus for E. ello (EeGV) were obtained from field larvae and characterized at morphological, biological and molecular level. Occlusion bodies (OB) of the three isolates showed an oval morphology with a unique nucleocapsid, with a size of 302.9 ± 22 x 181.5 ± 16 nm. Analysis of DNA endonuclease restriction profiles did not showed differences among the three viral isolates, which means that they correspond to samples of the same viral strain, denominated VG010. The VG010 viral genome size was estimated to be approximately 88.7 kb. The analysis of the phylogenetic relationships based on selected gene sequences lef-8, lef-9 and gran showed a close relationship between VG010 and the previously described isolate EeGV (M34-4). These sequence similarities suggest that the three isolates are genotypic variants of the same viral species. The in vitro efficacy of the VG010 isolate against second and fourth instar larvae was 100 and 64%, respectively, while the mean lethal concentration (LC50) was 4,3 x 103 OB/mL. The viral productivity ranged between 2.1 x 109 and 3.8 x 109 OB/g of larvae. These results represent the basis to develop a new biopesticide control agent for the pest in the field.

16.
PLoS One ; 8(10): e77683, 2013.
Article in English | MEDLINE | ID: mdl-24204916

ABSTRACT

A recombinant virus lacking the sf32 gene (Sf32null), unique to the Spodoptera frugiperda multiple nucleopolyhedrovirus (SfMNPV), was generated by homologous recombination from a bacmid comprising the complete viral genome (Sfbac). Transcriptional analysis revealed that sf32 is an early gene. Occlusion bodies (OBs) of Sf32null contained 62% more genomic DNA than viruses containing the sf32 gene, Sfbac and Sf32null-repair, although Sf32null DNA was three-fold less infective when injected in vivo. Sf32null OBs were 18% larger in diameter and contained 17% more nucleocapsids within ODVs than those of Sfbac. No significant differences were detected in OB pathogenicity (50% lethal concentration), speed-of-kill or budded virus production in vivo. In contrast, the production of OBs/larva was reduced by 39% in insects infected by Sf32null compared to those infected by Sfbac. The SF32 predicted protein sequence showed homology (25% identity, 44% similarity) to two adhesion proteins from Streptococcus pyogenes and a single N-mirystoylation site was predicted. We conclude that SF32 is a non-essential protein that could be involved in nucleocapsid organization during ODV assembly and occlusion, resulting in increased numbers of nucleocapsids within ODVs.


Subject(s)
Nucleocapsid/genetics , Nucleopolyhedroviruses/genetics , Spodoptera/virology , Virion/genetics , Animals , DNA, Viral/genetics , Genes, Essential/genetics , Genome, Viral/genetics , Genotype , Larva/virology , Viral Proteins/genetics , Virus Replication/genetics
17.
PLoS One ; 8(10): e77271, 2013.
Article in English | MEDLINE | ID: mdl-24116220

ABSTRACT

A Colombian field isolate (SfCOL-wt) of Spodoptera frugiperda multiple nucleopolyhedrovirus (SfMNPV) is a mixture of different genotypes. To evaluate the insecticidal properties of the different genotypic variants, 83 plaque purified virus were characterized. Ten distinct genotypes were identified (named A through J). SfCOL-A was the most prevalent (71±2%; mean ± SE) showing a PstI restriction profile indistinguishable to that of SfCOL-wt. The remaining nine genotypes presented genomic deletions of 3.8 - 21.8 Kb located mainly between nucleotides 11,436 and 33,883 in the reference genome SfMNPV-B, affecting the region between open reading frames (ORFs) sf20 and sf33. The insecticidal activity of each genotype from SfCOL-wt and several mixtures of genotypes was compared to that of SfCOL-wt. The potency of SfCOL-A occlusion bodies (OBs) was 4.4-fold higher than SfCOL-wt OBs, whereas the speed of kill of SfCOL-A was similar to that of SfCOL-wt. Deletion genotype OBs were similarly or less potent than SfCOL-wt but six deletion genotypes were faster killing than SfCOL-wt. The potency of genotype mixtures co-occluded within OBs were consistently reduced in two-genotype mixtures involving equal proportions of SfCOL-A and one of three deletion genotypes (SfCOL-C, -D or -F). Speed of kill and OB production were improved only when the certain genotype mixtures were co-occluded, although OB production was higher in the SfCOL-wt isolate than in any of the component genotypes, or mixtures thereof. Deleted genotypes reduced OB potency but increased OB production of the SfCOL-wt population, which is structured to maximize the production of OBs in each infected host.


Subject(s)
Nucleopolyhedroviruses/genetics , Nucleopolyhedroviruses/pathogenicity , Spodoptera/virology , Animals , Gene Deletion , Genes, Viral , Genetic Variation , Genotype , Host-Pathogen Interactions , Nucleopolyhedroviruses/physiology , Open Reading Frames , Viral Proteins/genetics
18.
J Microencapsul ; 27(4): 314-24, 2010.
Article in English | MEDLINE | ID: mdl-19839785

ABSTRACT

The aim of this study was to encapsulate the occlusion bodies (OBs) of Spodoptera frugiperda nucleopolyhedrovirus (SfNPV) in Eudragit S100 microparticles (MPs), considering this technique as a possible alternative to protect them from deleterious environmental conditions. The MPs were prepared by oil-in-oil emulsion (O/O) solvent evaporation method. Experimental conditions were established according to a previous multi-level experimental design involving the core/polymer ratio as independent variable. The effects of these parameters on particle size and process yield were investigated observing that polymer concentration had a significant effect on particle size. After adequate conditions for MPs formation were determined, virus was encapsulated. The virus microparticles presented a particle size between 50-300 microm and concentration was 2.62 x 10(9) OBs g(-1). Microencapsulation efficiency was 53.43% and virus release adjusted to Higuchi model suggesting diffusion as the release mechanism. Evaluated microencapsulation process protected viral particles of UV-inactivation, suggesting its potential for a biopesticide development.


Subject(s)
Acrylic Resins/chemistry , Drug Delivery Systems/methods , Light , Nucleopolyhedroviruses/chemistry , Spodoptera , Viral Proteins/chemistry , Virus Release , Animals , Chemistry, Physical , Drug Compounding/methods , Drug Stability , Microscopy, Electron, Scanning , Virus Release/radiation effects
19.
Vaccine ; 26(34): 4387-95, 2008 Aug 12.
Article in English | MEDLINE | ID: mdl-18585422

ABSTRACT

This study reports the Rv1490 gene presence and transcription in members of the Mycobacterium tuberculosis complex, and characterises the encoded Rv1490 putative membrane protein in M. tuberculosis H37Rv. Rv1490 derived peptides were synthesised and their A549 and U937 cell binding ability was tested, finding five high activity binding peptides (HABPs) for A549 and five for U937. Only two HABPs (11060 and 11073) were shared by both cell lines, both of which affected M. tuberculosis' invading ability to target cells, thus indicating an important role for these sequences in M. tuberculosis entry to A549 alveolar epithelial cells and supporting their inclusion in further studies on the development of a subunit-based multi-epitopic, chemically synthesised anti-tuberculosis vaccine.


Subject(s)
Bacterial Proteins/metabolism , Epithelial Cells/microbiology , Membrane Proteins/metabolism , Mycobacterium tuberculosis/physiology , Peptides/metabolism , Amino Acid Sequence , Animals , Bacterial Adhesion , Bacterial Proteins/genetics , Cell Line , Membrane Proteins/genetics , Microscopy, Electron, Transmission , Molecular Sequence Data , Mycobacterium tuberculosis/genetics , Peptides/genetics , Protein Binding , Rabbits
20.
Protein Sci ; 14(11): 2767-80, 2005 Nov.
Article in English | MEDLINE | ID: mdl-16199660

ABSTRACT

Virulence and immunity are still poorly understood in Mycobacterium tuberculosis. The H37Rv M. tuberculosis laboratory strain genome has been completely sequenced, and this along with proteomic technology represent powerful tools contributing toward studying the biology of target cell interaction with a facultative bacillus and designing new strategies for controlling tuberculosis. Rv2004c is a putative M. tuberculosis protein that could have specific mycobacterial functions. This study has revealed that the encoding gene is present in all mycobacterium species belonging to the M. tuberculosis complex. Rv2004c gene transcription was observed in all of this complex's strains except Mycobacterium bovis and Mycobacterium microti. Rv2004c protein expression was confirmed by using antibodies able to recognize a 54-kDa molecule by immunoblotting, and its location was detected on the M. tuberculosis surface by transmission electron microscopy, suggesting that it is a mycobacterial surface protein. Binding assays led to recognizing high activity binding peptides (HABP); five HABPs specifically bound to U937 cells, and six specifically bound to A549 cells. HABP circular dichroism suggested that they had an alpha-helical structure. HABP-target cell interaction was determined to be specific and saturable; some of them also displayed greater affinity for A549 cells than U937 cells. The critical amino acids directly involved in their interaction with U937 cells were also determined. Two probable receptor molecules were found on U937 cells and five on A549 for the two HABPs analyzed. These observations have important biological significance for studying bacillus-target cell interactions and implications for developing strategies for controlling this disease.


Subject(s)
Bacterial Proteins/chemistry , Mycobacterium tuberculosis/metabolism , Amino Acid Sequence , Antibodies, Bacterial/immunology , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Binding Sites , Cell Line , Cell Wall/chemistry , Circular Dichroism , Epithelial Cells/microbiology , Humans , Macrophages/microbiology , Molecular Sequence Data , Mycobacterium tuberculosis/genetics , Mycobacterium tuberculosis/isolation & purification , Peptides/chemistry , Peptides/metabolism , Receptors, Cell Surface/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, Protein , U937 Cells
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