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1.
Gene ; 896: 148052, 2024 Feb 20.
Article in English | MEDLINE | ID: mdl-38042210

ABSTRACT

Myocardial infarction (MI) is when a blood clot in the coronary artery obstructs blood flow to a specific part of the heart, leading to the death of myocardium in that area. The development of MI is influenced by various environmental factors, genetic components, and their interactions, even though the exact cause has not been fully established. This is the first case-control study examining the possible association between the human Apo B gene and MI in the Punjab region of Pakistan. The study included 100 patients and 50 healthy individuals. Genomic DNA was isolated from blood samples using manual extraction methods. Subsequently, primers were optimized, and genotyping was performed using PCR, followed by DNA sequencing and RFLP analysis. The research focused on two specific APO B gene SNPs, codon 4154 G/A (rs1801701) and codon 2488 G/A (rs1042031). Both SNPs involved the substitution of guanine with adenine. It was found that individuals carrying the minor allele A of SNP rs1801701 (p < 0.001) and the minor allele A of rs1042031 (p < 0.001) had a significantly higher risk of developing MI. Additionally, haplotype analysis revealed that the AA haplotype (comprising both rs1801701 and rs1042031 SNPs) was associated with a substantially increased risk of MI (OR = 3.845). In conclusion, the study provides evidence supporting the association between specific mutations in the APOB gene and the risk of myocardial infarction in the Pakistani population.


Subject(s)
Apolipoproteins B , Myocardial Infarction , Humans , Apolipoproteins B/genetics , Case-Control Studies , Codon , Genetic Predisposition to Disease , Myocardial Infarction/genetics , Myocardial Infarction/epidemiology , Pakistan , Polymorphism, Single Nucleotide , Risk Factors
2.
Braz. j. infect. dis ; 21(4): 418-423, July-Aug. 2017. tab
Article in English | LILACS | ID: biblio-888896

ABSTRACT

Abstract Introduction: The present study was designed to investigate the association between rs8177374 polymorphism and malaria symptoms due to exposure of Plasmodium vivax and Plasmodium falciparum. Materials and methods: A total of 454 samples were included in the study (228 malaria patients and 226 healthy individuals). Malaria patients, divided into P. vivax and P. falciparum groups on the basis of the causative species of Plasmodium, were categorized into mild and severe on the basis of clinical outcomes according to WHO criteria. Healthy individuals were used as controls. Allele specific PCR based strategy was used for the identification of rs8177374 SNP. Results: MyD88-adaptor-like gene polymorphism was associated with susceptibility to malaria (p < 0.001). C allele frequency (0.74) was higher in the population compared to T allele frequency (0.26). CT genotype increased the susceptibility of malaria (OR: 2.661; 95% CI: 1.722-4.113) and was positively associated with mild malaria (OR: 5.609; 95% CI: 3.479-9.044, p = 0.00). On the other hand, CC genotype was associated with severe malaria (OR: 3.116; 95% CI: 1.560-6.224, p = 0.00). P. vivax infection rate was higher in CT genotype carriers compared to other genotypes (OR: 3.616; 95% CI: 2.219-5.894, p < 0.001). Conclusion: MyD88-adaptor-like/TIR domain containing adaptor protein polymorphism for single nucleotide polymorphism rs8177374 is related with the susceptibility of malaria.


Subject(s)
Humans , Male , Female , Adult , Membrane Glycoproteins/physiology , Malaria, Vivax/genetics , Malaria, Falciparum/genetics , Receptors, Interleukin-1/physiology , Genetic Predisposition to Disease/genetics , Polymorphism, Single Nucleotide , Pakistan , Severity of Illness Index , Membrane Glycoproteins/genetics , Case-Control Studies , Polymerase Chain Reaction , Receptors, Interleukin-1/genetics , Gene Frequency , Genotype
3.
Braz J Infect Dis ; 21(4): 418-423, 2017.
Article in English | MEDLINE | ID: mdl-28482182

ABSTRACT

INTRODUCTION: The present study was designed to investigate the association between rs8177374 polymorphism and malaria symptoms due to exposure of Plasmodium vivax and Plasmodium falciparum. MATERIALS AND METHODS: A total of 454 samples were included in the study (228 malaria patients and 226 healthy individuals). Malaria patients, divided into P. vivax and P. falciparum groups on the basis of the causative species of Plasmodium, were categorized into mild and severe on the basis of clinical outcomes according to WHO criteria. Healthy individuals were used as controls. Allele specific PCR based strategy was used for the identification of rs8177374 SNP. RESULTS: MyD88-adaptor-like gene polymorphism was associated with susceptibility to malaria (p<0.001). C allele frequency (0.74) was higher in the population compared to T allele frequency (0.26). CT genotype increased the susceptibility of malaria (OR: 2.661; 95% CI: 1.722-4.113) and was positively associated with mild malaria (OR: 5.609; 95% CI: 3.479-9.044, p=0.00). On the other hand, CC genotype was associated with severe malaria (OR: 3.116; 95% CI: 1.560-6.224, p=0.00). P. vivax infection rate was higher in CT genotype carriers compared to other genotypes (OR: 3.616; 95% CI: 2.219-5.894, p<0.001). CONCLUSION: MyD88-adaptor-like/TIR domain containing adaptor protein polymorphism for single nucleotide polymorphism rs8177374 is related with the susceptibility of malaria.


Subject(s)
Genetic Predisposition to Disease/genetics , Malaria, Falciparum/genetics , Malaria, Vivax/genetics , Membrane Glycoproteins/physiology , Polymorphism, Single Nucleotide , Receptors, Interleukin-1/physiology , Severity of Illness Index , Adult , Case-Control Studies , Female , Gene Frequency , Genotype , Humans , Male , Membrane Glycoproteins/genetics , Pakistan , Polymerase Chain Reaction , Receptors, Interleukin-1/genetics
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