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1.
Technol Cancer Res Treat ; 11(1): 83-93, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22181334

ABSTRACT

Novel therapies are needed for treating hepatocellular carcinoma (HCC) without recurrence in a single procedure. In this work we evaluated anti-neoplastic effects of a pulse power ablation (PPA) with nanosecond pulsed electric fields (nsPEFs), a non-thermal, non-drug, local, regional method and investigated its molecular mechanisms for hepatocellular carcinoma tumor ablation in vivo. An ectopic tumor model was established using C57BL/6 mice with Hepa1-6 hepatocellular carcinoma cells. Pulses with durations of 30 or 100 ns and fast rise times were delivered by a needle or ring electrode with different electric field strengths (33, 50 and 68 kV/cm), and 900 pulses in three treatment sessions (300 pulses each session) or a single 900 pulse treatment. Treated and control tumor volumes were monitored by ultrasound and apoptosis and angiogenesis markers were evaluated by immunohistochemistry. Seventy five percent of primary hepatocellular carcinoma tumors were eradicated with 900 hundred pulses at 100 ns pulses at 68 kV/cm in a single treatment or in three treatment sessions without recurrence within 9 months. Using quantitative analysis, tumors in treated animals showed nsPEF-mediated nuclear condensation (3 h post-pulse), cell shrinkage (1 h), increases in active executioner caspases (caspase-3 > -7 > -6) and terminal deoxynucleotidyl transferase dUTP nick-end-labeling (1 h) with decreases in vascular endothelial growth factor expression (7d) and micro-vessel density (14d). NsPEF ablation eliminated hepatocellular carcinoma tumors by targeting two therapeutic sites, apoptosis induction and inhibition of angiogenesis, both important cancer hallmarks. These data indicate that PPA with nsPEFs is not limited to treating skin cancers and provide a rationale for continuing to investigate pulse power ablation for hepatocellular carcinoma using other models in pre-clinical applications and ultimately in clinical trials. Based on present treatments for specific HCC stages, it is anticipated that nsPEFs could be substituted for or used in combination with ablation therapies using heat, cold or chemicals.


Subject(s)
Carcinoma, Hepatocellular/therapy , Catheter Ablation/methods , Liver Neoplasms/therapy , Animals , Apoptosis/radiation effects , Carcinoma, Hepatocellular/metabolism , Carcinoma, Hepatocellular/pathology , Cell Line, Tumor , Disease Models, Animal , Electromagnetic Fields , In Situ Nick-End Labeling , Liver Neoplasms/metabolism , Liver Neoplasms/pathology , Mice , Mice, Inbred C57BL , Neoplasm Transplantation
2.
Phys Rev E Stat Nonlin Soft Matter Phys ; 75(4 Pt 1): 041920, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17500934

ABSTRACT

Numerical simulations for electrically induced, intracellular calcium release from the endoplasmic reticulum are reported. A two-step model is used for self-consistency. Distributed electrical circuit representation coupled with the Smoluchowski equation yields the ER membrane nanoporation for calcium outflow based on a numerical simulation. This is combined with the continuum Li-Rinzel model and drift diffusion for calcium dynamics. Our results are shown to be in agreement with reported calcium release data. A modest increase (rough doubling) of the cellular calcium is predicted in the absence of extra-cellular calcium. In particular, the applied field of 15 kV/cm with 60 ns pulse duration makes for a strong comparison. No oscillations are predicted and the net recovery period of about 5 min are both in agreement with published experimental results. A quantitative explanation for the lack of such oscillatory behavior, based on the density dependent calcium fluxes, is also provided.


Subject(s)
Biophysics/methods , Calcium/metabolism , Endoplasmic Reticulum/metabolism , Animals , Calcium Signaling , Computer Simulation , Cytoplasm/metabolism , Electroporation , Kinetics , Membrane Potentials , Models, Statistical , Models, Theoretical , Oscillometry , Time Factors
3.
Theor Appl Genet ; 113(1): 100-9, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16614831

ABSTRACT

A diversity survey was used to estimate allelic diversity and heterozygosity of 129 microsatellite markers in a panel of 44 common bean (Phaseolus vulgaris L.) genotypes that have been used as parents of mapping populations. Two types of microsatellites were evaluated, based respectively on gene coding and genomic sequences. Genetic diversity was evaluated by estimating the polymorphism information content (PIC), as well as the distribution and range of alleles sizes. Gene-based microsatellites proved to be less polymorphic than genomic microsatellites in terms of both number of alleles (6.0 vs. 9.2) and PIC values (0.446 vs. 0.594) while greater size differences between the largest and the smallest allele were observed for the genomic microsatellites than for the gene-based microsatellites (31.4 vs. 19.1 bp). Markers that showed a high number of alleles were identified with a maximum of 28 alleles for the marker BMd1. The microsatellites were useful for distinguishing Andean and Mesoamerican genotypes, for uncovering the races within each genepool and for separating wild accessions from cultivars. Greater polymorphism and race structure was found within the Andean gene pool than within the Mesoamerican gene pool and polymorphism rate between genotypes was consistent with genepool and race identity. Comparisons between Andean genotypes had higher polymorphism (53.0%) on average than comparisons among Mesoamerican genotypes (33.4%). Within the Mesoamerican parental combinations, the intra-racial combinations between Mesoamerica and Durango or Jalisco race genotypes showed higher average rates of polymorphism (37.5%) than the within-race combinations between Mesoamerica race genotypes (31.7%). In multiple correspondance analysis we found two principal clusters of genotypes corresponding to the Mesoamerican and Andean gene pools and subgroups representing specific races especially for the Nueva Granada and Peru races of the Andean gene pool. Intra population diversity was higher within the Andean genepool than within the Mesoamerican genepool and this pattern was observed for both gene-based and genomic microsatellites. Furthermore, intra-population diversity within the Andean races (0.356 on average) was higher than within the Mesoamerican races (0.302). Within the Andean gene pool, race Peru had higher diversity compared to race Nueva Granada, while within the Mesoamerican gene pool, the races Durango, Guatemala and Jalisco had comparable levels of diversity which were below that of race Mesoamerica.


Subject(s)
Phaseolus/genetics , Alleles , Crosses, Genetic , DNA, Plant/genetics , Genetic Variation , Genotype , Heterozygote , Microsatellite Repeats , Polymorphism, Genetic
4.
Biophys J ; 90(10): 3608-15, 2006 May 15.
Article in English | MEDLINE | ID: mdl-16513782

ABSTRACT

The change in the membrane potential of Jurkat cells in response to nanosecond pulsed electric fields was studied for pulses with a duration of 60 ns and maximum field strengths of approximately 100 kV/cm (100 V/cell diameter). Membranes of Jurkat cells were stained with a fast voltage-sensitive dye, ANNINE-6, which has a subnanosecond voltage response time. A temporal resolution of 5 ns was achieved by the excitation of this dye with a tunable laser pulse. The laser pulse was synchronized with the applied electric field to record images at times before, during, and after exposure. When exposing the Jurkat cells to a pulse, the voltage across the membrane at the anodic pole of the cell reached values of 1.6 V after 15 ns, almost twice the voltage level generally required for electroporation. Voltages across the membrane on the side facing the cathode reached values of only 0.6 V in the same time period, indicating a strong asymmetry in conduction mechanisms in the membranes of the two opposite cell hemispheres. This small voltage drop of 0.6-1.6 V across the plasma membrane demonstrates that nearly the entire imposed electric field of 10 V/mum penetrates into the interior of the cell and every organelle.


Subject(s)
Cell Membrane/physiology , Cell Membrane/ultrastructure , Electroporation/methods , Membrane Potentials/physiology , Cell Membrane/radiation effects , Dose-Response Relationship, Radiation , Electromagnetic Fields , Humans , Jurkat Cells , Membrane Potentials/radiation effects , Radiation Dosage
5.
Theor Appl Genet ; 112(6): 1149-63, 2006 Apr.
Article in English | MEDLINE | ID: mdl-16432734

ABSTRACT

Advanced backcross QTL analysis was used to identify quantitative trait loci (QTL) for agronomic performance in a population of BC2F(3:5) introgression lines created from the cross of a Colombian large red-seeded commercial cultivar, ICA Cerinza, and a wild common bean accession, G24404. A total of 157 lines were evaluated for phenological traits, plant architecture, seed weight, yield and yield components in replicated trials in three environments in Colombia and genotyped with microsatellite, SCAR, and phaseolin markers that were used to create a genetic map that covered all 11 linkage groups of the common bean genome with markers spaced at an average distance of every 10.4 cM. Segregation distortion was most significant in regions orthologous for a seed coat color locus (R-C) on linkage group b08 and two domestication syndrome genes, one on linkage group b01 at the determinacy (fin) locus and the other on linkage group b02 at the seed-shattering (st) locus. Composite interval mapping analysis identified a total of 41 significant QTL for the eight traits measured of which five for seed weight, two for days to flowering, and one for yield were consistent across two or more environments. QTL were located on every linkage group with b06 showing the greatest number of independent loci. A total of 13 QTL for plant height, yield and yield components along with a single QTL for seed size showed positive alleles from the wild parent while the remaining QTL showed positive alleles from the cultivated parent. Some QTL co-localized with regions that had previously been described to be important for these traits. Compensation was observed between greater pod and seed production and smaller seed size and may have resulted from QTL for these traits being linked or pleiotropic. Although wild beans have been used before to transfer biotic stress resistance traits, this study is the first to attempt to simultaneously obtain a higher yield potential from wild beans and to analyze this trait with single-copy markers. The wild accession was notable for being from a unique center of diversity and for contributing positive alleles for yield and other traits to the introgression lines showing the potential that advanced backcrossing has in common bean improvement.


Subject(s)
Crosses, Genetic , Genetic Linkage , Phaseolus/genetics , Phenotype , Quantitative Trait Loci/genetics , Quantitative Trait, Heritable , Chromosome Mapping , Chromosomes, Plant , Genome, Plant , Phaseolus/growth & development
6.
Phys Rev E Stat Nonlin Soft Matter Phys ; 71(3 Pt 1): 031914, 2005 Mar.
Article in English | MEDLINE | ID: mdl-15903466

ABSTRACT

A molecular dynamics (MD) scheme is combined with a distributed circuit model for a self-consistent analysis of the transient membrane response for cells subjected to an ultrashort (nanosecond) high-intensity (approximately 0.01-V/nm spatially averaged field) voltage pulse. The dynamical, stochastic, many-body aspects are treated at the molecular level by resorting to a course-grained representation of the membrane lipid molecules. Coupling the Smoluchowski equation to the distributed electrical model for current flow provides the time-dependent transmembrane fields for the MD simulations. A good match between the simulation results and available experimental data is obtained. Predictions include pore formation times of about 5-6 ns. It is also shown that the pore formation process would tend to begin from the anodic side of an electrically stressed membrane. Furthermore, the present simulations demonstrate that ions could facilitate pore formation. This could be of practical importance and have direct relevance to the recent observations of calcium release from the endoplasmic reticulum in cells subjected to such ultrashort, high-intensity pulses.


Subject(s)
Cell Membrane Permeability/physiology , Cell Membrane Permeability/radiation effects , Cell Membrane/physiology , Cell Membrane/radiation effects , Electromagnetic Fields , Electroporation/methods , Models, Biological , Animals , Cell Membrane/chemistry , Computer Simulation , Dose-Response Relationship, Radiation , Humans , Lipid Bilayers/chemistry , Lipid Bilayers/radiation effects , Models, Chemical , Models, Molecular , Porosity/radiation effects , Time Factors
7.
Mol Hum Reprod ; 10(11): 825-34, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15465851

ABSTRACT

In this study we extended earlier work to determine whether sperm respond to somatic cell apoptotic stimuli and whether apoptotic phenotypes are significant indicators of human sperm quality. We evaluated ejaculated sperm from fertile donors and subfertile patients following purification of fractions of high and low motility. In unstimulated conditions, caspase enzymatic activity was higher in motile fractions from subfertile patients than in donors, and was higher in low motility fractions from both groups. Staurosporine, but not a Fas ligand or H2O2, significantly increased caspase activity, but only in high motility fractions. Procaspase-3, -7 and -9 and low levels of active caspase-3, -7 and -9 were identified by immunoblot analysis. Apoptosis-inducing factor (AIF) was present in all samples but poly ADP-ribose polymerase-1 (PARP-1) was not detected. Phosphatidylserine translocation was significantly increased only with H2O2 treatment. In ejaculates of both subfertile and fertile men, we demonstrated the presence and activation of several proteins that are key constituents of apoptosis-related pathways in somatic cells, which may serve as markers for sperm quality.


Subject(s)
Apoptosis , Infertility, Male/diagnosis , Sperm Motility/physiology , Spermatozoa/chemistry , Spermatozoa/metabolism , Adult , Annexin A5/metabolism , Apoptosis Inducing Factor , Biological Transport/physiology , Biomarkers/analysis , Biomarkers/metabolism , Caspases/analysis , Caspases/metabolism , Ejaculation/physiology , Fas Ligand Protein , Flavoproteins/analysis , Flavoproteins/metabolism , Humans , Isoenzymes/analysis , Isoenzymes/metabolism , Male , Membrane Glycoproteins/pharmacology , Membrane Proteins/analysis , Membrane Proteins/metabolism , Phosphatidylserines/metabolism , Poly(ADP-ribose) Polymerases/analysis , Poly(ADP-ribose) Polymerases/metabolism , Sperm Motility/drug effects , Spermatozoa/cytology , Staurosporine/pharmacology
8.
Phys Rev E Stat Nonlin Soft Matter Phys ; 69(5 Pt 1): 051901, 2004 May.
Article in English | MEDLINE | ID: mdl-15244841

ABSTRACT

We provide a simple, but physical analysis for cell irreversibility and apoptosis in response to an ultrashort (nanosecond), high-intensity electric pulse. Our approach is based on an energy landscape model for determining the temporal evolution of the configurational probability function p(q). The primary focus is on obtaining qualitative predictions of a pulse width dependence to apoptotic cell irreversibility that has been observed experimentally. The analysis couples a distributed electrical model for current flow with the Smoluchowski equation to provide self-consistent, time-dependent transmembrane voltages. The model captures the essence of the experimentally observed pulse-width dependence, and provides a possible physical picture that depends only on the electrical trigger. A number of interesting features are predicted.


Subject(s)
Biophysics/methods , Electricity , Electronics , Electrophysiology , Models, Statistical , Time Factors
9.
Theor Appl Genet ; 108(2): 243-52, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14657984

ABSTRACT

Progress in bean breeding programs requires the exploitation of genetic variation that is present among races or through introgression across gene pools of Phaseolus vulgaris L. Of the two major common bean gene pools, the Andean gene pool seems to have a narrow genetic base, with about 10% of the accessions in the CIAT core collection presenting evidence of introgression. The objective of this study was to quantify the degree of spontaneous introgression in a sample of common bean landraces from the Andean gene pool. The effects of introgression on morphological, economic and nutritional attributes were also investigated. Homogeneity analysis was performed on molecular marker data from 426 Andean-type accessions from the primary centres of origin of the CIAT common bean core collection and two check varieties. Quantitative attribute diversity for 15 traits was studied based on the groups found from the cluster analysis of marker prevalence indices computed for each accession. The two-group summary consisted of one group of 58 accessions (14%) with low prevalence indices and another group of 370 accessions (86%) with high prevalence indices. The smaller group occupied the outlying area of points displayed from homogeneity analysis, yet their geographic origin was widely distributed over the Andean region. This group was regarded as introgressed, since its accessions displayed traits that are associated with the Middle American gene pool: high resistance to Andean disease isolates but low resistance to Middle American disease isolates, low seed weight and high scores for all nutrient elements. Genotypes generated by spontaneous introgression can be helpful for breeders to overcome the difficulties in transferring traits between gene pools.


Subject(s)
Fabaceae/classification , Fabaceae/genetics , Genetic Variation , Plant Diseases/microbiology , Breeding , Colletotrichum/pathogenicity , DNA, Plant/genetics , Fabaceae/microbiology , Gene Pool , Genetic Markers , Genetics, Population , Genotype , Geography , Phenotype , Phylogeny , Plant Diseases/genetics , Plant Proteins/genetics , Quantitative Trait Loci , Random Amplified Polymorphic DNA Technique
10.
Mutat Res ; 542(1-2): 65-75, 2003 Dec 09.
Article in English | MEDLINE | ID: mdl-14644355

ABSTRACT

High power, nanosecond pulsed electric field (nsPEF) effects have been focused on bacterial decontamination, but the impact on mammalian cells is now being revealed. During nsPEF applications, electrical pulses of 10, 60 or 300 ns durations were applied to cells using electric field amplitudes as high as 300 kV/cm. Because of the ultra-short pulse durations, the energy transferred to cells is negligible, and only non-thermal effects are observed. We investigated the genotoxicity of nsPEF on adherent and non-adherent cell lines including 10 human lines and one mouse cell line with different origin and growth characteristics. We present data examining the effects of nsPEF exposure on cell survival assessed by clonogenic formation or live cell count; DNA damage determined by the comet assay and chromosome aberrations; and cell cycle parameters by measuring the mitotic indices of exposed cells. Using each of these indicators, we observed differential effects among cell types with non-adherent cells being more sensitive to the genotoxic effects of nsPEF exposures than adherent cells. Non-adherent cultures showed a rapid decrease in cell viability (90%), induction of DNA damage, and a decrease in the number of cells reaching mitosis after one 60 ns pulse with an electric field intensity of 60 kV/cm. These effects were not observed in cells grown as adherent cultures, with the exception of the mouse 3T3 cell line, which showed survival characteristics similar to non-adherent cultures. These data suggest that nsPEF genotoxicity may be cell type specific, and therefore have potential applications in the selective removal of one cell type from another, for example, in diseased states.


Subject(s)
DNA Damage , Electricity/adverse effects , Mitosis/physiology , Animals , Cell Adhesion/physiology , Cell Line , Cell Survival/physiology , Comet Assay , Electroporation , Humans , Mice , Mitotic Index
11.
Theor Appl Genet ; 107(8): 1362-74, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14504741

ABSTRACT

A total of 150 microsatellite markers developed for common bean ( Phaseolus vulgaris L.) were tested for parental polymorphism and used to determine the positions of 100 genetic loci on an integrated genetic map of the species. The value of these single-copy markers was evident in their ability to link two existing RFLP-based genetic maps with a base map developed for the Mesoamerican x Andean population, DOR364 x G19833. Two types of microsatellites were mapped, based respectively on gene-coding and anonymous genomic-sequences. Gene-based microsatellites proved to be less polymorphic (46.3%) than anonymous genomic microsatellites (64.3%) between the parents of two inter-genepool crosses. The majority of the microsatellites produced single bands and detected single loci, however four of the gene-based and three of the genomic microsatellites produced consistent double or multiple banding patterns and detected more than one locus. Microsatellite loci were found on each of the 11 chromosomes of common bean, the number per chromosome ranging from 5 to 17 with an average of ten microsatellites each. Total map length for the base map was 1,720 cM and the average chromosome length was 156.4 cM, with an average distance between microsatellite loci of 19.5 cM. The development of new microsatellites from sequences in the Genbank database and the implication of these results for genetic mapping, quantitative trait locus analysis and marker-assisted selection in common bean are described.


Subject(s)
Genome, Plant , Microsatellite Repeats/genetics , Phaseolus/genetics , Base Sequence , DNA Primers , Heterozygote , Polymorphism, Genetic , Polymorphism, Restriction Fragment Length
12.
Plant Foods Hum Nutr ; 58(4): 285-97, 2003.
Article in English | MEDLINE | ID: mdl-15354788

ABSTRACT

Common beans (Phaseolus vulgaris L) contain a number of antinutritional factors such as condensed tannins. Reducing tannin concentration might contribute to improving the nutritional quality of common bean. But polyphenolics are involved in resistance to diseases and pests, and reducing tannin concentration may have a negative effect on plant resistance. Furthermore, the effects of tannin on disease resistance in different gene pools or in different seed colors are not defined. To investigate these effects, 790 accessions from a common bean core collection were investigated. Data were subjected to independent sample t-tests, and the calculation of correlation coefficients. The mean coat extracts of black and red bean classes were highest (with 0.129 g/g and 0.124 g/g of seed coat, respectively). Among the gene pools, the coat extract was greater in the Middle American gene pool (0.129 g/g) than in the Andean gene pool (0.108 g/g). Coat extract in the Andean gene pool was positively correlated with susceptibility to Middle American isolates of anthracnose and to common bacterial blight, but negatively correlated with susceptibility to Andean isolates of angular leaf spot and to empoasca. Only empoasca damage showed negative correlation with coat extract in the Middle American gene pool. However within gene pools, the coat extracts of different seed classes varied in correlations with reactions to disease and pest infestations. Significant correlations were particularly associated with the black seed class in both gene pools. The relationships between coat extract and disease reactions are complex. A better understanding will help breeders to select germplasm with improved nutritional quality without adversely affecting disease resistance.


Subject(s)
Pest Control, Biological , Phaseolus/physiology , Plant Diseases/genetics , Seeds/physiology , Tannins/immunology , Breeding , Color , Gene Pool , Genotype , Immunity, Innate/physiology , Phaseolus/genetics , Plant Diseases/microbiology , Seeds/genetics
13.
Plant Dis ; 86(12): 1383-1387, 2002 Dec.
Article in English | MEDLINE | ID: mdl-30818445

ABSTRACT

Use of genetic resistance is the most practical and economic way to manage anthracnose of common bean. Colletotrichum lindemuthianum, the causal agent of bean anthracnose, is a highly variabile pathogen, and there are no host resistance genes that are effective against all known races of the pathogen. To diversify sources of resistance, we screened the core collection of the secondary gene pool of Phaseolus spp. and interspecific lines derived from simple and complex crosses of primary and secondary genotypes for their resistance to anthracnose. High levels of resistance were observed in the secondary gene pool. None of the 162 accessions tested was susceptible to C. lindemuthianum. Of the two species composing the secondary gene pool, P. polyanthus displayed higher levels of resistance than P. coccineus, and all accessions tested were resistant. The response of P. coccineus was more variable, with six genotypes showing an intermediate reaction. Among the 75 lines from interspecific crosses, 49 were resistant to the three races (races 6, 15, and 3481) used in this study, and higher levels of resistance were found in lines that had P. polyanthus as one of the parents in the crosses than in the lines derived from P. coccineus. These lines constitute a valuable source of resistance and may aid in the development of stable resistance to anthracnose.

14.
Bioelectromagnetics ; 22(6): 440-8, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11536285

ABSTRACT

A simple electrical model for biological cells predicts an increasing probability for electric field interactions with cell substructures of prokaryotic and eukaryotic cells when the electric pulse duration is reduced into the sub-microsecond range. The validity of this hypothesis was verified experimentally by applying electrical pulses with electric field intensities of up to 5.3 MV/m to human eosinophils in vitro. When 3-5 pulses of 60 ns duration were applied to human eosinophils, intracellular granules were modified without permanent disruption of the plasma membrane. In spite of the extreme electrical power levels applied to the cells thermal effects could be neglected because of the ultrashort pulse duration. The intracellular effect extends conventional electroporation to cellular substructures and opens the potential for new applications in apoptosis induction, gene delivery to the nucleus, or altered cell functions, depending on the electrical pulse conditions.


Subject(s)
Electricity , Eosinophils/physiology , Neutrophils/physiology , Cell Membrane/physiology , Cell Membrane/radiation effects , Cell Membrane/ultrastructure , Cytoplasmic Granules/physiology , Cytoplasmic Granules/radiation effects , Cytoplasmic Granules/ultrastructure , Eosinophils/radiation effects , Eosinophils/ultrastructure , Humans , In Vitro Techniques , Neutrophils/radiation effects , Neutrophils/ultrastructure , Time Factors
15.
Plant Physiol ; 125(4): 1901-11, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11299369

ABSTRACT

Acid phosphatase is believed to be important for phosphorus scavenging and remobilization in plants, but its role in plant adaptation to low phosphorus availability has not been critically evaluated. To address this issue, we compared acid phosphatase activity (APA) in leaves of common bean (Phaseolus vulgaris) in a phosphorus-inefficient genotype (DOR364), a phosphorus-efficient genotype (G19833), and their F(5.10) recombinant inbred lines (RILs). Phosphorus deficiency substantially increased leaf APA, but APA was much higher and more responsive to phosphorus availability in DOR364 than in G19833. Leaf APA segregated in the RILs, with two discrete groups having either high (mean = 1.71 micromol/mg protein/min) or low (0.36 micromol/mg protein/min) activity. A chi-square test indicated that the observed difference might be controlled by a single gene. Non-denaturing protein electrophoresis revealed that there are four visible isoforms responsible for total APA in common bean, and that the difference in APA between contrasting genotypes could be attributed to the existence of a single major isoform. Qualitative mapping of the APA trait and quantitative trait loci analysis with molecular markers indicated that a major gene contributing to APA is located on linkage group B03 of the unified common bean map. This locus was not associated with loci conferring phosphorus acquisition efficiency or phosphorus use efficiency. RILs contrasting for APA had similar phosphorus pools in old and young leaves under phosphorus stress, arguing against a role for APA in phosphorus remobilization. Our results do not support a major role for leaf APA induction in regulating plant adaptation to phosphorus deficiency.


Subject(s)
Acid Phosphatase/genetics , Acid Phosphatase/metabolism , Chromosome Mapping , Fabaceae/physiology , Phosphorus/metabolism , Plant Leaves/enzymology , Plants, Medicinal , Crosses, Genetic , Fabaceae/enzymology , Fabaceae/genetics , Genetic Linkage , Genetic Markers , Genotype , Isoenzymes/genetics , Isoenzymes/metabolism , Quantitative Trait, Heritable , Recombination, Genetic , Restriction Mapping
16.
J Agric Food Chem ; 48(8): 3576-80, 2000 Aug.
Article in English | MEDLINE | ID: mdl-10956153

ABSTRACT

The bioavailability of Fe from 24 select genotypes of bean (Phaseolus vulgaris L.) seeds containing a range of concentrations of Fe, myo-inositol pentaphosphate plus phytic acid (IP5+IP6), and tannins was studied using a rat model. Bean accessions, selected from field trials for their variations in Fe, phytate, and tannin seed concentrations, were grown in a greenhouse in nutrient solutions radiolabeled with (59)Fe. Mature seeds were autoclaved and lyophilized. Test meals (containing 1 g of dried bean, 0.5 g of sucrose, and 1 g of basal Fe-deficient diet) were fed to marginally Fe-depleted weanling rats over a 3-h period; rats were radioassayed in a gamma-spectrometer immediately after feeding and daily thereafter for the next 10 d. Radioiron retention data were used to calculate percent Fe absorption (i.e., Fe bioavailability) from the meals. Seed Fe concentrations ranged from 52 to 157 microg g(-)(1) dry weight. There was a tendency to also select for higher Zn concentrations in the beans when selecting for high Fe concentrations. The Fe bioavailability to rats from test meals depended on the genotype and varied from 53% to 76% of the total Fe. Bean genotypes with higher seed Fe concentrations resulted in increased amounts of bioavailable Fe to rats. There was no significant correlation between the Fe concentration in different bean genotypes and Fe bioavailability to rats attributable to variations in IP5+IP6 or tannins, even though these antinutrients varied widely (i.e., from 19.6 to 29.2 micromol of IP5+IP6 g(-)(1) and from 0.35 to 2.65 mg of tannins g(-)(1)) in the test meals. Other unknown seed factors (i.e., antinutrients or promoter substances) may be contributing factors affecting Fe bioavailability from bean seeds.


Subject(s)
Fabaceae/genetics , Iron/pharmacokinetics , Plants, Medicinal , Seeds/metabolism , Selection, Genetic , Animals , Biological Availability , Fabaceae/embryology , Male , Rats , Rats, Sprague-Dawley
18.
J Biol Chem ; 273(12): 6736-43, 1998 Mar 20.
Article in English | MEDLINE | ID: mdl-9506973

ABSTRACT

Current data suggest that apoptosis controls neutrophil numbers in tissues. We analyzed roles for and the sites of action for the cAMP-dependent protein kinases (cAPKs) in apoptosis induced in human neutrophils by in vitro storage, cycloheximide (CHX) exposure, and anti-Fas exposure. Treatment with 8-chlorophenylthio-cAMP (8-CPT-cAMP) prolonged the time required for 50% of the cells to exhibit apoptotic morphology (t50) from 16.3 to 41.8 h (in vitro culture), from 2.4 to 7.8 h (CHX), and from 4.8 to 6.5 h (anti-Fas). CHX +/- 8-CPT-cAMP did not significantly alter resting intracellular calcium levels and H-89, a selective inhibitor of cAPK, had no effect on apoptosis in the absence of the analogue. In contrast, site-selective cAMP analogues that specifically activated the type I cAPK, but not type II cAPK, synergistically attenuated apoptosis. Exposure to 8-CPT-cAMP delayed, in parallel, the activity of caspase-3 (CPP-32beta), whereas mitogen-activated protein kinase kinase (MAPKK) inhibitor, PD98059, had no effect on CHX-induced apoptosis +/- 8-CPT-cAMP. Together these results indicate that type I cAPK activation is necessary and sufficient to mediate cAMP-induced delay in human neutrophil apoptosis induced by several mechanisms and suggest that one of the major sites of cAPK action is upstream of caspase-3 (CPP-32beta) activation.


Subject(s)
Apoptosis , Caspases , Cyclic AMP-Dependent Protein Kinases/metabolism , Cysteine Endopeptidases/metabolism , Neutrophils/cytology , Adult , Apoptosis/drug effects , Calcium/metabolism , Caspase 3 , Cells, Cultured , Cyclic AMP/analogs & derivatives , Cyclic AMP/pharmacology , Cyclic AMP-Dependent Protein Kinase Type II , Cyclic AMP-Dependent Protein Kinases/antagonists & inhibitors , Cycloheximide/pharmacology , Enzyme Activation , Female , Humans , Male , Neutrophils/drug effects , Neutrophils/enzymology , Thionucleotides/pharmacology
19.
Pediatrics ; 98(2 Pt 1): 231-5, 1996 Aug.
Article in English | MEDLINE | ID: mdl-8692623

ABSTRACT

OBJECTIVE: To investigate the effect of hospital discharge time on neonatal mortality of term newborns. DESIGN: Infants who were discharged home at 5 days of age of younger and who subsequently died were compared with control infants using a retrospective case-control design. Descriptive information was collected from records of infants who were not discharged home from the hospital of birth (because of death or transfer to a tertiary care hospital) to determine the age at which their illnesses presented. METHODS: We reviewed death certificates for all infants with birth weights of 2500 g or greater born at 37 weeks' gestational age or greater who died in the first 28 days of life and who were born in one of four Utah counties (1985 through 1989). Of the 109,256 eligible births, 115 infants were found who had died in the neonatal period. Eighty-four infants had not been discharged home from the hospital of birth, 5 infants had had hospital stays of more than 5 days, 9 records could not be located, 17 presumed healthy infants were discharged from the hospital at 5 days of age or younger. These 17 infants were each matched with 3 control infants. Newborn nursery charts were reviewed to determine hospital discharge times for case and control infants. Descriptive information regarding the time of presentation of illness was collected for the other 89 infants. RESULTS: The mean age of hospital discharge was 43 +/- 21 hours for the 17 case infants and 47 +/- 25 hours for the 51 control infants. The odds ratio for neonatal mortality for discharge at less than 24 hours was 1.65 (95% confidence interval, 0.42 to 3.34) and for discharge at less than 48 hours was 1.16 (95% confidence interval, 0.4 to 3.34). Of the 84 infants who were not discharged home from the hospital of birth, 93% had been symptomatic by 12 hours of age, and 99% were symptomatic by 18 hours. CONCLUSIONS: Most full-term infants who die in the neonatal period are symptomatic within the first 18 hours after birth. We could not demonstrate an association between early hospital discharge and neonatal mortality in those infants who died after discharge home.


Subject(s)
Infant Mortality , Length of Stay/statistics & numerical data , Patient Discharge/statistics & numerical data , Age of Onset , Case-Control Studies , Cause of Death , Death Certificates , Female , Humans , Infant, Newborn , Male , Odds Ratio , Retrospective Studies , Risk Factors , Sudden Infant Death/epidemiology , Time Factors
20.
Am J Physiol ; 269(1 Pt 2): H356-64, 1995 Jul.
Article in English | MEDLINE | ID: mdl-7631868

ABSTRACT

This study was designed to determine the effects of angiotensin II infusion on structure of conduit and resistance arteries and to see if the effects correlate with changes in platelet-derived growth factor A chain (PDGF-A) gene and protein expression. Wistar rats were subcutaneously infused by osmotic minipump with either angiotensin II (ANG II) at 200 ng.kg-1.min-1 or physiological saline (control) for 14 days. Tail-cuff systolic blood pressure was significantly higher in ANG II compared with control rats beginning the second day of infusion and continuing to the end of 2 wk. Both aorta and external spermatic artery (first-order arteriole of the cremaster muscle) developed increased wall-to-lumen ratios in the ANG II rats, but this occurred by hypertrophy of the wall in the aorta and reduction of the lumen in the arteriole. Digoxigenin-labeled cRNA probes were used for in situ hybridization of vascular sections to identify PDGF-A mRNA. Gene expression of PDGF-A in ANG II rats was upregulated in the hypertrophied aorta and the nonhypertrophied arteriole. With the use of immunocytochemistry techniques, PDGF-A and proliferating cell nuclear antigen were increased in the aorta but not in the arterioles of ANG II rats compared with control rats. These results suggest that the difference in growth response between the aorta and the arteriole induced by ANG II may lie in posttranscriptional modification of PDGF-A mRNA, differential control of transition, or turnover of PDGF-A protein.


Subject(s)
Angiotensin II/pharmacology , Aorta/drug effects , Aorta/growth & development , Arterioles/drug effects , Arterioles/growth & development , Platelet-Derived Growth Factor/physiology , Animals , Aorta/metabolism , Arterioles/metabolism , Immunohistochemistry , Male , Muscle, Smooth, Vascular/cytology , Muscle, Smooth, Vascular/metabolism , Platelet-Derived Growth Factor/genetics , Proliferating Cell Nuclear Antigen/metabolism , RNA, Messenger/metabolism , Rats , Rats, Wistar , Vasodilation
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