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1.
Int J Mol Sci ; 25(7)2024 Apr 06.
Article in English | MEDLINE | ID: mdl-38612894

ABSTRACT

With the ambition to identify novel chemical starting points that can be further optimized into small drug-like inhibitors of insulin-regulated aminopeptidase (IRAP) and serve as potential future cognitive enhancers in the clinic, we conducted an ultra-high-throughput screening campaign of a chemically diverse compound library of approximately 400,000 drug-like small molecules. Three biochemical and one biophysical assays were developed to enable large-scale screening and hit triaging. The screening funnel, designed to be compatible with high-density microplates, was established with two enzyme inhibition assays employing either fluorescent or absorbance readouts. As IRAP is a zinc-dependent enzyme, the remaining active compounds were further evaluated in the primary assay, albeit with the addition of zinc ions. Rescreening with zinc confirmed the inhibitory activity for most compounds, emphasizing a zinc-independent mechanism of action. Additionally, target engagement was confirmed using a complementary biophysical thermal shift assay where compounds causing positive/negative thermal shifts were considered genuine binders. Triaging based on biochemical activity, target engagement, and drug-likeness resulted in the selection of 50 qualified hits, of which the IC50 of 32 compounds was below 3.5 µM. Despite hydroxamic acid dominance, diverse chemotypes with biochemical activity and target engagement were discovered, including non-hydroxamic acid compounds. The most potent compound (QHL1) was resynthesized with a confirmed inhibitory IC50 of 320 nM. Amongst these compounds, 20 new compound structure classes were identified, providing many new starting points for the development of unique IRAP inhibitors. Detailed characterization and optimization of lead compounds, considering both hydroxamic acids and other diverse structures, are in progress for further exploration.


Subject(s)
Aminopeptidases , Insulin , High-Throughput Screening Assays , Insulin, Regular, Human , Coloring Agents , Hydroxamic Acids , Zinc
2.
J Med Chem ; 66(2): 1522-1542, 2023 01 26.
Article in English | MEDLINE | ID: mdl-36626662

ABSTRACT

Herein, we describe the hit optimization of a novel diarylthioether chemical class found to be active against Trypanosoma cruzi; the parasite responsible for Chagas disease. The hit compound was discovered through a whole-cell phenotypic screen and as such, the mechanism of action for this chemical class is unknown. Our investigations led to clear structure-activity relationships and the discovery of several analogues with high in vitro potency. Furthermore, we observed excellent activity during acute in vivo efficacy studies in mice infected with transgenic T. cruzi. These diarylthioether compounds represent a promising new chemotype for Chagas disease drug discovery and merit further development to increase oral exposure without increasing toxicity.


Subject(s)
Chagas Disease , Trypanocidal Agents , Trypanosoma cruzi , Mice , Animals , Trypanocidal Agents/pharmacology , Trypanocidal Agents/therapeutic use , Trypanocidal Agents/chemistry , Chagas Disease/drug therapy , Chagas Disease/parasitology , Structure-Activity Relationship , Drug Discovery
3.
J Med Chem ; 64(7): 4150-4162, 2021 04 08.
Article in English | MEDLINE | ID: mdl-33759519

ABSTRACT

Novel 3,3'-disubstituted-5,5'-bi(1,2,4-triazine) compounds with potent in vitro activity against Plasmodium falciparum parasites were recently discovered. To improve the pharmacokinetic properties of the triazine derivatives, a new structure-activity relationship (SAR) investigation was initiated with a focus on enhancing the metabolic stability of lead compounds. These efforts led to the identification of second-generation highly potent antimalarial bis-triazines, exemplified by triazine 23, which exhibited significantly improved in vitro metabolic stability (8 and 42 µL/min/mg protein in human and mouse liver microsomes). The disubstituted triazine dimer 23 was also observed to suppress parasitemia in the Peters 4-day test with a mean ED50 value of 1.85 mg/kg/day and exhibited a fast-killing profile, revealing a new class of orally available antimalarial compounds of considerable interest.


Subject(s)
Antimalarials/therapeutic use , Malaria/drug therapy , Triazines/therapeutic use , Animals , Antimalarials/chemical synthesis , Antimalarials/pharmacokinetics , Caco-2 Cells , Female , Humans , Male , Mice, Inbred NOD , Mice, SCID , Microsomes, Liver/drug effects , Molecular Structure , Parasitic Sensitivity Tests , Plasmodium berghei/drug effects , Plasmodium falciparum/drug effects , Rats, Sprague-Dawley , Structure-Activity Relationship , Triazines/chemical synthesis , Triazines/pharmacokinetics
4.
J Med Chem ; 62(10): 5242-5248, 2019 05 23.
Article in English | MEDLINE | ID: mdl-31038950

ABSTRACT

Herein we describe the development of a focused series of functionalized pyridazin-3(2 H)-one-based formyl peptide receptor (FPR) agonists that demonstrate high potency and biased agonism. The compounds described demonstrated biased activation of prosurvival signaling, ERK1/2 phosphorylation, through diminution of the detrimental FPR1/2-mediated intracellular calcium (Cai2+) mobilization. Compound 50 showed an EC50 of 0.083 µM for phosphorylation of ERK1/2 and an approximate 20-fold bias away from Cai2+ mobilization at the hFPR1.


Subject(s)
Pyrazines/chemical synthesis , Pyrazines/pharmacology , Receptors, Formyl Peptide/agonists , Blood Proteins/metabolism , Calcium Signaling/drug effects , Drug Discovery , HL-60 Cells , Humans , Inflammation/drug therapy , Inflammation/metabolism , MAP Kinase Signaling System/drug effects , Phosphorylation/drug effects , Protein Binding , Receptors, Lipoxin , Structure-Activity Relationship
5.
J Med Chem ; 62(5): 2485-2498, 2019 03 14.
Article in English | MEDLINE | ID: mdl-30715882

ABSTRACT

A series of 3,3'-disubstituted 5,5'-bi(1,2,4-triazine) derivatives was synthesized and screened against the erythrocytic stage of Plasmodium falciparum 3D7 line. The most potent dimer, 6k, with an IC50 (50% inhibitory concentration) of 0.008 µM, had high in vitro potency against P. falciparum lines resistant to chloroquine (W2, IC50 = 0.0047 ± 0.0011 µM) and artemisinin (MRA1240, IC50 = 0.0086 ± 0.0010 µM). Excellent ex vivo potency of 6k was shown against clinical field isolates of both P. falciparum (IC50 = 0.022-0.034 µM) and Plasmodium vivax (IC50 = 0.0093-0.031 µM) from the blood of outpatients with uncomplicated malaria. Despite 6k being cleared relatively rapidly in mice, it suppressed parasitemia in the Peters 4-day test, with a mean ED50 value (50% effective dose) of 1.47 mg kg-1 day-1 following oral administration. The disubstituted triazine dimer 6k represents a new class of orally available antimalarial compounds of considerable interest for further development.


Subject(s)
Antimalarials/pharmacology , Triazines/pharmacology , Animals , Antimalarials/chemistry , Antimalarials/pharmacokinetics , Chloroquine/pharmacology , Drug Resistance , Humans , In Vitro Techniques , Magnetic Resonance Spectroscopy/methods , Mice , Molecular Structure , Plasmodium/classification , Plasmodium/drug effects , Species Specificity , Structure-Activity Relationship , Triazines/chemistry , Triazines/pharmacokinetics
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