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1.
Life Sci Alliance ; 6(1)2023 01.
Article in English | MEDLINE | ID: mdl-36265897

ABSTRACT

The coordination of cell division with stress response is essential for maintaining genome stability in plant meristems. Proteins involved in pre-mRNA splicing are important for these processes in animal and human cells. Based on its homology to the splicing factor SART1, which is implicated in the control of cell division and genome stability in human cells, we analyzed if MDF has similar functions in plants. We found that MDF associates with U4/U6.U5 tri-snRNP proteins and is essential for correct splicing of 2,037 transcripts. Loss of MDF function leads to cell division defects and cell death in meristems and was associated with up-regulation of stress-induced genes and down-regulation of mitotic regulators. In addition, the mdf-1 mutant is hypersensitive to DNA damage treatment supporting its role in coordinating stress response with cell division. Our analysis of a dephosphomutant of MDF suggested how its protein activity might be controlled. Our work uncovers the conserved function of a plant splicing factor and provides novel insight into the interplay of pre-mRNA processing and genome stability in plants.


Subject(s)
Arabidopsis , Ribonucleoprotein, U5 Small Nuclear , Animals , Humans , Arabidopsis/genetics , Arabidopsis/metabolism , Cell Division/genetics , Genomic Instability , Ribonucleoprotein, U4-U6 Small Nuclear/genetics , Ribonucleoprotein, U4-U6 Small Nuclear/metabolism , Ribonucleoprotein, U5 Small Nuclear/genetics , Ribonucleoprotein, U5 Small Nuclear/metabolism , RNA Precursors/genetics , RNA Precursors/metabolism , RNA Splicing Factors/genetics
2.
Cells ; 10(4)2021 04 01.
Article in English | MEDLINE | ID: mdl-33915825

ABSTRACT

Higher plants represent a large group of eukaryotes where centrosomes are absent. The functions of γ-tubulin small complexes (γ-TuSCs) and γ-tubulin ring complexes (γ-TuRCs) in metazoans and fungi in microtubule nucleation are well established and the majority of components found in the complexes are present in plants. However, plant microtubules are also nucleated in a γ-tubulin-dependent but γ-TuRC-independent manner. There is growing evidence that γ-tubulin is a microtubule nucleator without being complexed in γ-TuRC. Fibrillar arrays of γ-tubulin were demonstrated in plant and animal cells and the ability of γ-tubulin to assemble into linear oligomers/polymers was confirmed in vitro for both native and recombinant γ-tubulin. The functions of γ-tubulin as a template for microtubule nucleation or in promoting spontaneous nucleation is outlined. Higher plants represent an excellent model for studies on the role of γ-tubulin in nucleation due to their acentrosomal nature and high abundancy and conservation of γ-tubulin including its intrinsic ability to assemble filaments. The defining scaffolding or sequestration functions of plant γ-tubulin in microtubule organization or in nuclear processes will help our understanding of its cellular roles in eukaryotes.


Subject(s)
Cells/metabolism , Tubulin/metabolism , Amino Acid Sequence , Animals , Centrosome/metabolism , Humans , Plants/metabolism , Tubulin/chemistry
3.
J Exp Bot ; 71(4): 1265-1277, 2020 02 19.
Article in English | MEDLINE | ID: mdl-31693141

ABSTRACT

γ-Tubulin is associated with microtubule nucleation, but evidence is accumulating in eukaryotes that it also functions in nuclear processes and in cell division control independently of its canonical role. We found that in Arabidopsis thaliana, γ-tubulin interacts specifically with E2FA, E2FB, and E2FC transcription factors both in vitro and in vivo. The interaction of γ-tubulin with the E2Fs is not reduced in the presence of their dimerization partners (DPs) and, in agreement, we found that γ-tubulin interaction with E2Fs does not require the dimerization domain. γ-Tubulin associates with the promoters of E2F-regulated cell cycle genes in an E2F-dependent manner, probably in complex with the E2F-DP heterodimer. The up-regulation of E2F target genes PCNA, ORC2, CDKB1;1, and CCS52A under γ-tubulin silencing suggests a repressive function for γ-tubulin at G1/S and G2/M transitions, and the endocycle, which is consistent with an excess of cell division in some cells and enhanced endoreduplication in others in the shoot and young leaves of γ-tubulin RNAi plants. Altogether, our data show ternary interaction of γ-tubulin with the E2F-DP heterodimer and suggest a repressive role for γ-tubulin with E2Fs in controlling mitotic activity and endoreduplication during plant development.


Subject(s)
Arabidopsis Proteins , Arabidopsis , E2F Transcription Factors , Tubulin , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Cell Cycle Proteins , E2F Transcription Factors/genetics , E2F Transcription Factors/metabolism , Gene Expression Regulation, Plant , Tubulin/genetics
4.
Cells ; 8(10)2019 10 22.
Article in English | MEDLINE | ID: mdl-31652491

ABSTRACT

Highly conserved α- and ß-tubulin heterodimers assemble into dynamic microtubules and perform multiple important cellular functions such as structural support, pathway for transport and force generation in cell division. Tubulin exists in different forms of isotypes expressed by specific genes with spatially- and temporally-regulated expression levels. Some tubulin isotypes are differentially expressed in normal and neoplastic cells, providing a basis for cancer chemotherapy drug development. Moreover, specific tubulin isotypes are overexpressed and localized in the nuclei of cancer cells and/or show bioenergetic functions through the regulation of the permeability of mitochondrial ion channels. It has also become clear that tubulin isotypes are involved in multiple cellular functions without being incorporated into microtubule structures. Understanding the mutations of tubulin isotypes specifically expressed in tumors and their post-translational modifications might help to identify precise molecular targets for the design of novel anti-microtubular drugs. Knowledge of tubulin mutations present in tubulinopathies brings into focus cellular functions of tubulin in brain pathologies such as Alzheimer's disease. Uncovering signaling pathways which affect tubulin functions during antigen-mediated activation of mast cells presents a major challenge in developing new strategies for the treatment of inflammatory and allergic diseases. γ-tubulin, a conserved member of the eukaryotic tubulin superfamily specialized for microtubule nucleation is a target of cell cycle and stress signaling. Besides its microtubule nucleation role, γ-tubulin functions in nuclear and cell cycle related processes. This special issue "Tubulin: Structure, Functions and Roles in Disease" contains eight articles, five of which are original research papers and three are review papers that cover diverse areas of tubulin biology and functions under normal and pathological conditions.


Subject(s)
Alzheimer Disease/metabolism , Neoplasm Proteins/metabolism , Neoplasms/metabolism , Tubulin/metabolism , Alzheimer Disease/genetics , Alzheimer Disease/pathology , Animals , Humans , Microtubules/genetics , Microtubules/metabolism , Microtubules/pathology , Mutation , Neoplasm Proteins/genetics , Neoplasms/genetics , Protein Isoforms , Tubulin/genetics
5.
Cells ; 8(3)2019 03 19.
Article in English | MEDLINE | ID: mdl-30893853

ABSTRACT

γ-Tubulin is a conserved member of the tubulin superfamily with a function in microtubule nucleation. Proteins of γ-tubulin complexes serve as nucleation templates as well as a majority of other proteins contributing to centrosomal and non-centrosomal nucleation, conserved across eukaryotes. There is a growing amount of evidence of γ-tubulin functions besides microtubule nucleation in transcription, DNA damage response, chromatin remodeling, and on its interactions with tumor suppressors. However, the molecular mechanisms are not well understood. Furthermore, interactions with lamin and SUN proteins of the LINC complex suggest the role of γ-tubulin in the coupling of nuclear organization with cytoskeletons. γ-Tubulin that belongs to the clade of eukaryotic tubulins shows characteristics of both prokaryotic and eukaryotic tubulins. Both human and plant γ-tubulins preserve the ability of prokaryotic tubulins to assemble filaments and higher-order fibrillar networks. γ-Tubulin filaments, with bundling and aggregating capacity, are suggested to perform complex scaffolding and sequestration functions. In this review, we discuss a plethora of γ-tubulin molecular interactions and cellular functions, as well as recent advances in understanding the molecular mechanisms behind them.


Subject(s)
Cell Nucleus/metabolism , Microtubules/metabolism , Nuclear Proteins/metabolism , Tubulin/metabolism , Animals , Cell Cycle , Humans , Nuclear Envelope/metabolism
6.
Biochim Biophys Acta Mol Cell Res ; 1865(5): 734-748, 2018 May.
Article in English | MEDLINE | ID: mdl-29499229

ABSTRACT

γ-Tubulin is essential for microtubule nucleation and also plays less understood roles in nuclear and cell-cycle-related functions. High abundancy of γ-tubulin in acentrosomal Arabidopsis cells facilitated purification and biochemical characterization of large molecular species of γ-tubulin. TEM, fluorescence, and atomic force microscopy of purified high molecular γ-tubulin forms revealed the presence of linear filaments with a double protofilament substructure, filament bundles and aggregates. Filament formation from highly purified γ-tubulin free of γ-tubulin complex proteins (GCPs) was demonstrated for both plant and human γ-tubulin. Moreover, γ-tubulin associated with porcine brain microtubules formed oligomers. Experimental evidence on the intrinsic ability of γ-tubulin to oligomerize/polymerize was supported by conservation of α- and ß-tubulin interfaces for longitudinal and lateral interactions for γ-tubulins. STED (stimulated emission depletion) microscopy of Arabidopsis cells revealed fine, short γ-tubulin fibrillar structures enriched on mitotic microtubular arrays that accumulated at polar regions of acentrosomal spindles and the outer nuclear envelope before mitosis, and were also present in nuclei. Fine fibrillar structures of γ-tubulin representing assemblies of higher order were localized in cell-cycle-dependent manner at sites of dispersed γ-tubulin location in acentrosomal plant cells as well as at sites of local γ-tubulin enrichment after drug treatment. Our findings that γ-tubulin preserves the capability of prokaryotic tubulins to self-organize into filaments assembling by lateral interaction into bundles/clusters help understanding of the relationship between structure and multiple cellular functions of this protein species and suggest that besides microtubule nucleation and organization, γ-tubulin may also have scaffolding or sequestration functions.


Subject(s)
Cytoskeleton/genetics , Microtubule-Associated Proteins/genetics , Protein Aggregates/genetics , Tubulin/genetics , Actin Cytoskeleton/chemistry , Actin Cytoskeleton/genetics , Actin Cytoskeleton/ultrastructure , Arabidopsis/chemistry , Arabidopsis/genetics , Cytoskeleton/chemistry , Microtubule-Associated Proteins/chemistry , Microtubules/chemistry , Microtubules/genetics , Mitosis/genetics , Polymerization , Tubulin/chemistry , Tubulin/ultrastructure
7.
EMBO J ; 36(9): 1261-1278, 2017 05 02.
Article in English | MEDLINE | ID: mdl-28320736

ABSTRACT

The rapidly proliferating cells in plant meristems must be protected from genome damage. Here, we show that the regulatory role of the Arabidopsis RETINOBLASTOMA RELATED (RBR) in cell proliferation can be separated from a novel function in safeguarding genome integrity. Upon DNA damage, RBR and its binding partner E2FA are recruited to heterochromatic γH2AX-labelled DNA damage foci in an ATM- and ATR-dependent manner. These γH2AX-labelled DNA lesions are more dispersedly occupied by the conserved repair protein, AtBRCA1, which can also co-localise with RBR foci. RBR and AtBRCA1 physically interact in vitro and in planta Genetic interaction between the RBR-silenced amiRBR and Atbrca1 mutants suggests that RBR and AtBRCA1 may function together in maintaining genome integrity. Together with E2FA, RBR is directly involved in the transcriptional DNA damage response as well as in the cell death pathway that is independent of SOG1, the plant functional analogue of p53. Thus, plant homologs and analogues of major mammalian tumour suppressor proteins form a regulatory network that coordinates cell proliferation with cell and genome integrity.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/genetics , Cell Cycle Checkpoints , DNA Damage , DNA Repair , E2F Transcription Factors/metabolism , Gene Expression Regulation, Plant , Ataxia Telangiectasia Mutated Proteins/metabolism , DNA, Plant/metabolism
8.
New Phytol ; 207(4): 1061-74, 2015 Sep.
Article in English | MEDLINE | ID: mdl-26061286

ABSTRACT

Stress-activated plant mitogen-activated protein (MAP) kinase pathways play roles in growth adaptation to the environment by modulating cell division through cytoskeletal regulation, but the mechanisms are poorly understood. We performed protein interaction and phosphorylation experiments with cytoskeletal proteins, mass spectrometric identification of MPK6 complexes and immunofluorescence analyses of the microtubular cytoskeleton of mitotic cells using wild-type, mpk6-2 mutant and plants overexpressing the MAP kinase-inactivating phosphatase, AP2C3. We showed that MPK6 interacted with γ-tubulin and co-sedimented with plant microtubules polymerized in vitro. It was the active form of MAP kinase that was enriched with microtubules and followed similar dynamics to γ-tubulin, moving from poles to midzone during the anaphase-to-telophase transition. We found a novel substrate for MPK6, the microtubule plus end protein, EB1c. The mpk6-2 mutant was sensitive to 3-nitro-l-tyrosine (NO2 -Tyr) treatment with respect to mitotic abnormalities, and root cells overexpressing AP2C3 showed defects in chromosome segregation and spindle orientation. Our data suggest that the active form of MAP kinase interacts with γ-tubulin on specific subsets of mitotic microtubules during late mitosis. MPK6 phosphorylates EB1c, but not EB1a, and has a role in maintaining regular planes of cell division under stress conditions.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/enzymology , Microtubule-Associated Proteins/metabolism , Microtubules/metabolism , Mitogen-Activated Protein Kinases/metabolism , Spindle Apparatus/metabolism , Stress, Physiological , Tubulin/metabolism , Anaphase/drug effects , Arabidopsis/cytology , Arabidopsis/drug effects , Butadienes/pharmacology , Cell Proliferation/drug effects , Chromosome Segregation/drug effects , Cytokinesis/drug effects , Extracellular Signal-Regulated MAP Kinases/metabolism , Kinetochores/drug effects , Kinetochores/metabolism , Meristem/cytology , Meristem/drug effects , Meristem/metabolism , Microtubules/drug effects , Nitriles/pharmacology , Nitrosation/drug effects , Phosphorylation/drug effects , Plant Cells/drug effects , Plant Cells/metabolism , Spindle Apparatus/drug effects , Stress, Physiological/drug effects , Telophase/drug effects , Tyrosine/analogs & derivatives , Tyrosine/pharmacology
9.
J Exp Bot ; 64(14): 4575-87, 2013 Nov.
Article in English | MEDLINE | ID: mdl-24006426

ABSTRACT

TPX2 performs multiple roles in microtubule organization. Previously, it was shown that plant AtTPX2 binds AtAurora1 kinase and colocalizes with microtubules in a cell cycle-specific manner. To elucidate the function of TPX2 further, this work analysed Arabidopsis cells overexpressing AtTPX2-GFP. Distinct arrays of bundled microtubules, decorated with AtTPX2-GFP, were formed in the vicinity of the nuclear envelope and in the nuclei of overexpressing cells. The microtubular arrays showed reduced sensitivity to anti-microtubular drugs. TPX2-mediated formation of nuclear/perinuclear microtubular arrays was not specific for the transition to mitosis and occurred independently of Aurora kinase. The fibres were not observed in cells with detectable programmed cell death and, in this respect, they differed from TPX2-dependent microtubular assemblies functioning in mammalian apoptosis. Colocalization and co-purification data confirmed the interaction of importin with AtTPX2-GFP. In cells with nuclear foci of overexpressed AtTPX2-GFP, strong nuclear signals for Ran and importin diminished when microtubular arrays were assembled. This observation suggests that TPX2-mediated microtubule formation might be triggered by a Ran cycle. Collectively, the data suggest that in the acentrosomal plant cell, in conjunction with importin, overexpressed AtTPX2 reinforces microtubule formation in the vicinity of chromatin and the nuclear envelope.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Cell Nucleus/metabolism , Centrosome/metabolism , Microtubule-Associated Proteins/metabolism , Microtubules/metabolism , Plant Cells/metabolism , Apoptosis , Arabidopsis/cytology , Arabidopsis/enzymology , Aurora Kinases/metabolism , Chromatin/metabolism , Computer Simulation , Green Fluorescent Proteins/metabolism , Imaging, Three-Dimensional , Karyopherins/metabolism , Mitosis , Nuclear Envelope/metabolism , Protein Transport , Subcellular Fractions/metabolism , Tubulin/metabolism
10.
New Phytol ; 198(3): 685-698, 2013 May.
Article in English | MEDLINE | ID: mdl-23437871

ABSTRACT

Nitrilases are highly conserved proteins with catabolic activity but much less understood functions in cell division and apoptosis. To elucidate the biological functions of Arabidopsis NITRILASE1, we characterized its molecular forms, cellular localization and involvement in cell proliferation and plant development. We performed biochemical and mass spectrometry analyses of NITRILASE1 complexes, electron microscopy of nitrilase polymers, imaging of developmental and cellular distribution, silencing and overexpression of nitrilases to study their functions. We found that NITRILASE1 has an intrinsic ability to form filaments. GFP-NITRILASE1 was abundant in proliferating cells, distributed in cytoplasm, in the perinuclear area and associated with microtubules. As cells exited proliferation and entered differentiation, GFP-NITRILASE1 became predominantly nuclear. Nitrilase silencing dose-dependently compromised plant growth, led to loss of tissue organization and sustained proliferation. Cytokinesis was frequently aborted, leading to enlarged polyploid cells. In reverse, independently transformed cell lines overexpressing GFP-NITRILASE1 showed slow growth and increased rate of programmed cell death. Altogether, our data suggest that NITRILASE1 homologues regulate the exit from cell cycle and entry into differentiation and simultaneously are required for cytokinesis. These functions are essential to maintain normal ploidy, genome stability and tissue organization.


Subject(s)
Aminohydrolases/metabolism , Arabidopsis/growth & development , Arabidopsis/genetics , Genomic Instability , Acid Anhydride Hydrolases/genetics , Aminohydrolases/chemistry , Aminohydrolases/genetics , Aminohydrolases/ultrastructure , Arabidopsis/cytology , Cell Cycle/genetics , Cell Death/genetics , Cell Differentiation/genetics , Cell Proliferation , Cytoplasm/metabolism , Cytoskeleton/genetics , Cytoskeleton/metabolism , Gene Expression Regulation, Plant , Neoplasm Proteins/genetics , RNA Interference
11.
BMC Plant Biol ; 12: 83, 2012 Jun 07.
Article in English | MEDLINE | ID: mdl-22676313

ABSTRACT

BACKGROUND: RanBPM (Ran-binding protein in the microtubule-organizing centre) was originally reported as a centrosome-associated protein in human cells. However, RanBPM protein containing highly conserved SPRY, LisH, CTLH and CRA domains is currently considered as a scaffolding protein with multiple cellular functions. A plant homologue of RanBPM has not yet been characterized. RESULTS: Based on sequence similarity, we identified a homologue of the human RanBPM in Arabidopsis thaliana. AtRanBPM protein has highly conserved SPRY, LisH, CTLH and CRA domains. Cell fractionation showed that endogenous AtRanBPM or expressed GFP-AtRanBPM are mainly cytoplasmic proteins with only a minor portion detectable in microsomal fractions. AtRanBPM was identified predominantly in the form of soluble cytoplasmic complexes ~230-500 kDa in size. Immunopurification of AtRanBPM followed by mass spectrometric analysis identified proteins containing LisH and CRA domains; LisH, CRA, RING-U-box domains and a transducin/WD40 repeats in a complex with AtRanBPM. Homologues of identified proteins are known to be components of the C-terminal to the LisH motif (CTLH) complexes in humans and budding yeast. Microscopic analysis of GFP-AtRanBPM in vivo and immunofluorescence localization of endogenous AtRanBPM protein in cultured cells and seedlings of Arabidopsis showed mainly cytoplasmic and nuclear localization. Absence of colocalization with γ-tubulin was consistent with the biochemical data and suggests another than a centrosomal role of the AtRanBPM protein. CONCLUSION: We showed that as yet uncharacterized Arabidopsis RanBPM protein physically interacts with LisH-CTLH domain-containing proteins. The newly identified high molecular weight cytoplasmic protein complexes of AtRanBPM showed homology with CTLH types of complexes described in mammals and budding yeast. Although the exact functions of the CTLH complexes in scaffolding of protein degradation, in protein interactions and in signalling from the periphery to the cell centre are not yet fully understood, structural conservation of the complexes across eukaryotes suggests their important biological role.


Subject(s)
Adaptor Proteins, Signal Transducing/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Cytoskeletal Proteins/metabolism , Eukaryota/genetics , Evolution, Molecular , Nuclear Proteins/metabolism , Adaptor Proteins, Signal Transducing/genetics , Amino Acid Sequence , Arabidopsis/chemistry , Arabidopsis/genetics , Arabidopsis Proteins/chemistry , Arabidopsis Proteins/genetics , Conserved Sequence , Cytoskeletal Proteins/genetics , Eukaryota/chemistry , Eukaryota/classification , Humans , Molecular Sequence Data , Nuclear Proteins/genetics , Plants/chemistry , Plants/classification , Plants/genetics , Protein Binding , Protein Structure, Tertiary , Sequence Homology, Amino Acid
12.
New Phytol ; 193(3): 590-604, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22150830

ABSTRACT

• The conserved family of Aurora kinases has multiple functions during mitosis. The roles of plant Aurora kinases have been characterized using inhibitor treatments. • We down-regulated Aurora kinases in Arabidopsis thaliana using RNA interference (RNAi). We carried out a detailed phenotypic analysis of Aurora RNAi plants, biochemical and microscopic studies of AtAurora1 kinase together with AtTPX2 (targeting protein for Xklp2) and γ-tubulin. • Cell division defects were observed in plants with reduced expression of Aurora kinases. Furthermore, the maintenance of primary meristems was compromised and RNAi seedlings entered endoreduplication prematurely. AtAurora1, its activator AtTPX2, and γ-tubulin were associated with microtubules in vitro; they were attached to regrowing kinetochore microtubules and colocalized on spindle microtubules and with a subset of early phragmoplast microtubules. Only the AtAurora1 kinase was translocated to the area of the cell plate. • RNAi silencing of Aurora kinases showed that, in addition to their function in regulating mitosis, the kinases are required for maintaining meristematic activity and controlling the switch from meristematic cell proliferation to differentiation and endoreduplication. The colocalization and co-fractionation of AtAurora1 with AtTPX2, and γ-tubulin on microtubules in a cell cycle-specific manner suggests that AtAurora1 kinase may function to phosphorylate substrates that are critical to the spatiotemporal regulation of acentrosomal microtubule formation and organization.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/enzymology , Arabidopsis/genetics , Gene Duplication/genetics , Meristem/enzymology , Meristem/growth & development , Protein Serine-Threonine Kinases/metabolism , Aurora Kinases , Cell Division , Down-Regulation , Meristem/genetics , Microtubule-Associated Proteins/metabolism , Microtubules/metabolism , Phenotype , Protein Transport , RNA Interference , Tubulin/metabolism
13.
Planta ; 234(3): 459-76, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21533644

ABSTRACT

The nodulin/glutamine synthetase-like protein (NodGS) that we identified proteomically in Arabidopsis thaliana is a fusion protein composed of an N-terminal amidohydrolase domain that shares homology with nodulins and a C-terminal domain of prokaryotic glutamine synthetase type I. The protein is homologous to the FluG protein, a morphogenetic factor in fungi. Although genes encoding NodGS homologues are present in many plant genomes, their products have not yet been characterized. The Arabidopsis NodGS was present in an oligomeric form of ~700-kDa, mainly in the cytosol, and to a lesser extent in the microsomal membrane fraction. The oligomeric NodGS was incorporated into large heterogeneous protein complexes >700 kDa and partially co-immunoprecipitated with γ-tubulin. In situ and in vivo microscopic analyses revealed a NodGS signal in the cytoplasm, with endomembranes, particularly in the perinuclear area. NodGS had no detectable glutamine synthetase activity. Downregulation of NodGS by RNAi resulted in plants with a short main root, reduced meristematic activity and disrupted development of the root cap. Y2H analysis and publicly available microarray data indicated a role for NodGS in biotic stress signalling. We found that flagellin enhanced the expression of the NodGS protein, which was then preferentially localized in the nuclear periphery. Our results point to a role for NodGS in root morphogenesis and microbial elicitation. These data might help in understanding the family of NodGS/FluG-like fusion genes that are widespread in prokaryotes, fungi and plants.


Subject(s)
Arabidopsis Proteins/physiology , Flagellin/metabolism , Glutamate-Ammonia Ligase/physiology , Membrane Proteins/physiology , Morphogenesis/physiology , Plant Proteins/physiology , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Flagellin/genetics , Gene Expression Regulation, Plant , Genes, Plant , Glutamate-Ammonia Ligase/genetics , Glutamate-Ammonia Ligase/metabolism , Membrane Proteins/genetics , Membrane Proteins/metabolism , Plant Growth Regulators/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Roots/genetics , Plant Roots/growth & development , Plant Roots/metabolism , Signal Transduction
14.
Plant Physiol Biochem ; 47(7): 584-91, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19321355

ABSTRACT

The time courses of the contents of free, soluble and insoluble polyamine (PA) conjugates, PA biosynthetic and catabolic enzyme activities and mRNA levels of PA biosynthetic genes were monitored during the cell cycle of synchronized tobacco BY-2 cell line (Nicotiana tabacum L. cv. Bright Yellow 2). Progression through the cell cycle was characterized by specific biphasic changes of PA levels. The first, moderate peak in the amount of free PAs coincided with the S-phase. After a transient decline in G2 phase the contents of free PAs increased rapidly and peaked again during G2/M interface. Then sharply decreased with the minimum at the end of mitosis and during M/G1 transition and started to rise again with the next replication phase. Levels of PA soluble conjugates paralleled those of the free forms. Biosynthetic enzyme activities followed the biphasic manner analogous to the levels of free PAs and seemed to be regulated on both transcriptional and (post)translational level. PA cellular levels were further controlled by both catabolic degradation and conjugation of PAs. PA catabolism played an important role in the PA down-regulation during G2 phase and late mitosis, while the decline in free PAs in G2/M interface and during the whole mitosis resulted mainly from PA conjugation. This study's results demonstrate that during the cell cycle of tobacco BY-2 cells endogenous PA levels are intricately controlled, involving regulation of activities of biosynthetic, catabolic and conjugation enzymes.


Subject(s)
Cell Cycle/physiology , Nicotiana/metabolism , Polyamines/metabolism , Amine Oxidase (Copper-Containing)/metabolism , Carboxy-Lyases/metabolism , Cell Line , Gene Expression Regulation, Plant , Genes, Plant/physiology , Homeostasis , RNA, Messenger/metabolism , Nicotiana/cytology , Nicotiana/enzymology
15.
J Biol Chem ; 282(19): 14356-63, 2007 May 11.
Article in English | MEDLINE | ID: mdl-17339323

ABSTRACT

Cytokinins are a class of plant hormones that regulate the cell cycle and diverse developmental and physiological processes. Several compounds have been identified that antagonize the effects of cytokinins. Based on structural similarities and competitive inhibition, it has been assumed that these anticytokinins act through a common cellular target, namely the cytokinin receptor. Here, we examined directly the possibility that various representative classical anticytokinins inhibit the Arabidopsis cytokinin receptors CRE1/AHK4 (cytokinin response 1/Arabidopsis histidine kinase 4) and AHK3 (Arabidopsis histidine kinase 3). We show that pyrrolo[2,3-d]pyrimidine and pyrazolo[4,3-d]pyrimidine anticytokinins do not act as competitors of cytokinins at the receptor level. Flow cytometry and microscopic analyses revealed that anticytokinins inhibit the cell cycle and cause disorganization of the microtubular cytoskeleton and apoptosis. This is consistent with the hypothesis that they inhibit regulatory cyclin-dependent kinase (CDK) enzymes. Biochemical studies demonstrated inhibition by selected anti-cytokinins of both Arabidopsis and human CDKs. X-ray determination of the crystal structure of a human CDK2-anticytokinin complex demonstrated that the antagonist occupies the ATP-binding site of CDK2. Finally, treatment of human cancer cell lines with anticytokinins demonstrated their ability to kill human cells with similar effectiveness as known CDK inhibitors.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Cyclin-Dependent Kinase 2/antagonists & inhibitors , Cytokinins/metabolism , Protein Kinases/metabolism , Pyrimidines/pharmacology , Receptors, Cell Surface/metabolism , Apoptosis , Bone Neoplasms/metabolism , Bone Neoplasms/pathology , Breast Neoplasms/metabolism , Breast Neoplasms/pathology , Carrier Proteins , Cell Cycle , Cell Proliferation/drug effects , Crystallography, X-Ray , Cyclin-Dependent Kinase 2/metabolism , Cytokinins/antagonists & inhibitors , Cytoskeleton , Flow Cytometry , Gene Expression Regulation, Plant , Histidine Kinase , Humans , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/metabolism , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/pathology , Osteosarcoma/metabolism , Osteosarcoma/pathology , Tumor Cells, Cultured
16.
Plant Cell ; 18(5): 1199-212, 2006 May.
Article in English | MEDLINE | ID: mdl-16603653

ABSTRACT

Gamma-tubulin is required for microtubule (MT) nucleation at MT organizing centers such as centrosomes or spindle pole bodies, but little is known about its noncentrosomal functions. We conditionally downregulated gamma-tubulin by inducible expression of RNA interference (RNAi) constructs in Arabidopsis thaliana. Almost complete RNAi depletion of gamma-tubulin led to the absence of MTs and was lethal at the cotyledon stage. After induction of RNAi expression, gamma-tubulin was gradually depleted from both cytoplasmic and microsomal fractions. In RNAi plants with partial loss of gamma-tubulin, MT recovery after drug-induced depolymerization was impaired. Similarly, immunodepletion of gamma-tubulin from Arabidopsis extracts severely compromised in vitro polymerization of MTs. Reduction of gamma-tubulin protein levels led to randomization and bundling of cortical MTs. This finding indicates that MT-bound gamma-tubulin is part of a cortical template guiding the microtubular network and is essential for MT nucleation. Furthermore, we found that cells with decreased levels of gamma-tubulin could progress through mitosis, but cytokinesis was strongly affected. Stepwise diminution of gamma-tubulin allowed us to reveal roles for MT nucleation in plant development, such as organization of cell files, anisotropic and polar tip growth, and stomatal patterning. Some of these functions of gamma-tubulin might be independent of MT nucleation.


Subject(s)
Arabidopsis Proteins/physiology , Arabidopsis/cytology , Microtubules/ultrastructure , Mitosis/physiology , Tubulin/physiology , Arabidopsis/anatomy & histology , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Cell Enlargement , Cell Nucleus/physiology , Down-Regulation , Microtubules/metabolism , Molecular Sequence Data , Phenotype , Plant Leaves/cytology , Plant Leaves/growth & development , Plant Leaves/metabolism , Plant Roots/cytology , Plant Roots/growth & development , Plant Roots/metabolism , RNA Interference , Tubulin/genetics
17.
Plant Cell ; 16(3): 643-57, 2004 Mar.
Article in English | MEDLINE | ID: mdl-15004270

ABSTRACT

In plants after the disassembly of mitotic spindle, a specific cytokinetic structure called the phragmoplast is built, and after cytokinesis, microtubules populate the cell cortex in an organized orientation that determines cell elongation and shape. Here, we show that impaired cyclin B1 degradation, resulting from a mutation within its destruction box, leads to an isodiametric shape of epidermal cells in leaves, stems, and roots and retarded growth of seedlings. Microtubules in these misshaped cells are grossly disorganized, focused around the nucleus, whereas they were entirely missing or abnormally organized along the cell cortex. A high percentage of cells expressing nondestructible cyclin B1 had doubled DNA content as a result of undergoing endomitosis. During anaphase the cytokinesis-specific syntaxin KNOLLE could still localize to the midplane of cell division, whereas NPK1-activating kinesin-like protein 1, a cytokinetic kinesin-related protein, was unable to do so, and instead of the formation of a phragmoplast, the midzone microtubules persisted between the separated nuclei, which eventually fused. In summary, our results show that the timely degradation of mitotic cyclins in plants is required for the reorganization of mitotic microtubules to the phragmoplast and for proper cytokinesis. Subsequently, the presence of nondegradable cyclin B1 leads to a failure in organizing properly the cortical microtubules that determine cell elongation and shape.


Subject(s)
Cyclin B/metabolism , Nicotiana/growth & development , Nicotiana/metabolism , Base Sequence , Cell Division , Cyclin B/genetics , Cyclin B1 , Cyclin-Dependent Kinases/metabolism , DNA, Plant/genetics , DNA, Plant/metabolism , Gene Expression , Genes, Plant , Microtubules/metabolism , Mitosis , Mutation , Phenotype , Plant Proteins/metabolism , Plants, Genetically Modified , Polyploidy , Seedlings/metabolism , Spindle Apparatus/metabolism , Nicotiana/genetics
19.
Plant Cell ; 15(2): 465-80, 2003 Feb.
Article in English | MEDLINE | ID: mdl-12566585

ABSTRACT

gamma-Tubulin is assumed to participate in microtubule nucleation in acentrosomal plant cells, but the underlying molecular mechanisms are still unknown. Here, we show that gamma-tubulin is present in protein complexes of various sizes and different subcellular locations in Arabidopsis and fava bean. Immunoprecipitation experiments revealed an association of gamma-tubulin with alphabeta-tubulin dimers. gamma-Tubulin cosedimented with microtubules polymerized in vitro and localized along their whole length. Large gamma-tubulin complexes resistant to salt treatment were found to be associated with a high-speed microsomal fraction. Blue native electrophoresis of detergent-solubilized microsomes showed that the molecular mass of the complexes was >1 MD. Large gamma-tubulin complexes were active in microtubule nucleation, but nucleation activity was not observed for the smaller complexes. Punctate gamma-tubulin staining was associated with microtubule arrays, accumulated with short kinetochore microtubules interacting in polar regions with membranes, and localized in the vicinity of nuclei and in the area of cell plate formation. Our results indicate that the association of gamma-tubulin complexes with dynamic membranes might ensure the flexibility of noncentrosomal microtubule nucleation. Moreover, the presence of other molecular forms of gamma-tubulin suggests additional roles for this protein species in microtubule organization.


Subject(s)
Arabidopsis/metabolism , Cell Membrane/metabolism , Tubulin/metabolism , Vicia faba/metabolism , Antibodies, Antinuclear/genetics , Antibodies, Antinuclear/metabolism , Arabidopsis Proteins/metabolism , Cytosol/metabolism , Dimerization , Electrophoresis, Polyacrylamide Gel , Fluorescent Antibody Technique , Microsomes/metabolism , Microtubules/metabolism , Mitosis/physiology , Precipitin Tests , Protein Binding , Tubulin/chemistry , Tubulin/immunology
20.
J Cell Sci ; 116(Pt 3): 487-98, 2003 Feb 01.
Article in English | MEDLINE | ID: mdl-12508110

ABSTRACT

Mitotic progression is timely regulated by the accumulation and degradation of A- and B-type cyclins. In plants, there are three classes of A-, and two classes of B-type cyclins, but their specific roles are not known. We have generated transgenic tobacco plants in which the ectopic expression of a plant cyclin B2 gene is under the control of a tetracycline-inducible promoter. We show that the induction of cyclin B2 expression in cultured cells during G2 phase accelerates the entry into mitosis and allows cells to override the replication checkpoint induced by hydroxyurea in the simultaneous presence of caffeine or okadaic acid, drugs that are known to alleviate checkpoint control. These results indicate that in plants, a B2-type cyclin is a rate-limiting regulator for the entry into mitosis and a cyclin B2-CDK complex might be a target for checkpoint control pathways. The cyclin B2 localization and the timing of its degradation during mitosis corroborate these conclusions: cyclin B2 protein is confined to the nucleus and during mitosis it is only present during a short time window until mid prophase, but it is effectively degraded from this timepoint onwards. Although cyclin B2 is not present in cells arrested by the spindle checkpoint in metaphase, cyclin B1 is accumulating in these cells. Ectopic expression of cyclin B2 in developing plants interferes with differentiation events and specifically blocks root regeneration, indicating the importance of control mechanisms at the G2- to M-phase transition during plant developmental processes.


Subject(s)
Cyclin B/genetics , DNA Damage/genetics , Gene Expression Regulation, Developmental/genetics , Gene Expression Regulation, Plant/genetics , Genes, cdc/physiology , Mitosis/genetics , Nicotiana/growth & development , Plant Proteins/genetics , Caffeine/pharmacology , Cell Differentiation/genetics , Cell Nucleus/genetics , Cell Nucleus/metabolism , Cysteine Endopeptidases/metabolism , G2 Phase , Gene Expression Regulation, Developmental/drug effects , Gene Expression Regulation, Plant/drug effects , Genes, cdc/drug effects , Hydroxyurea/pharmacology , Mitosis/drug effects , Multienzyme Complexes/antagonists & inhibitors , Multienzyme Complexes/metabolism , Okadaic Acid/pharmacology , Plant Roots/drug effects , Plant Roots/growth & development , Plant Roots/metabolism , Promoter Regions, Genetic/drug effects , Promoter Regions, Genetic/genetics , Proteasome Endopeptidase Complex , Regeneration/drug effects , Regeneration/genetics , Spindle Apparatus/genetics , Nicotiana/genetics , Nicotiana/metabolism
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