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1.
Stem Cell Res Ther ; 10(1): 73, 2019 03 05.
Article in English | MEDLINE | ID: mdl-30836996

ABSTRACT

BACKGROUND: Mesenchymal stromal cells isolated from bone marrow (MSC) represent an attractive source of adult stem cells for regenerative medicine. However, thorough research is required into their clinical application safety issues concerning a risk of potential neoplastic degeneration in a process of MSC propagation in cell culture for therapeutic applications. Expansion protocols could preselect MSC with elevated levels of growth-promoting transcription factors with oncogenic potential, such as c-MYC. We addressed the question whether c-MYC expression affects the growth and differentiation potential of human MSC upon extensive passaging in cell culture and assessed a risk of tumorigenic transformation caused by MSC overexpressing c-MYC in vivo. METHODS: MSC were subjected to retroviral transduction to induce expression of c-MYC, or GFP, as a control. Cells were expanded, and effects of c-MYC overexpression on osteogenesis, adipogenesis, and chondrogenesis were monitored. Ectopic bone formation properties were tested in SCID mice. A potential risk of tumorigenesis imposed by MSC with c-MYC overexpression was evaluated. RESULTS: C-MYC levels accumulated during ex vivo passaging, and overexpression enabled the transformed MSC to significantly overgrow competing control cells in culture. C-MYC-MSC acquired enhanced biological functions of c-MYC: its increased DNA-binding activity, elevated expression of the c-MYC-binding partner MAX, and induction of antagonists P19ARF/P16INK4A. Overexpression of c-MYC stimulated MSC proliferation and reduced osteogenic, adipogenic, and chondrogenic differentiation. Surprisingly, c-MYC overexpression also caused an increased COL10A1/COL2A1 expression ratio upon chondrogenesis, suggesting a role in hypertrophic degeneration. However, the in vivo ectopic bone formation ability of c-MYC-transduced MSC remained comparable to control GFP-MSC. There was no indication of tumor growth in any tissue after transplantation of c-MYC-MSC in mice. CONCLUSIONS: C-MYC expression promoted high proliferation rates of MSC, attenuated but not abrogated their differentiation capacity, and did not immediately lead to tumor formation in the tested in vivo mouse model. However, upregulation of MYC antagonists P19ARF/P16INK4A promoting apoptosis and senescence, as well as an observed shift towards a hypertrophic collagen phenotype and cartilage degeneration, point to lack of safety for clinical application of MSC that were manipulated to overexpress c-MYC for their better expansion.


Subject(s)
Cell Differentiation/genetics , Cell Transformation, Neoplastic/genetics , Mesenchymal Stem Cells/metabolism , Proto-Oncogene Proteins c-myc/genetics , Adipogenesis/genetics , Animals , Apoptosis/genetics , Cell Proliferation/genetics , Chondrogenesis/genetics , Collagen Type II/genetics , Collagen Type X/genetics , Cyclin-Dependent Kinase Inhibitor p16/genetics , Gene Expression Regulation, Developmental/genetics , Humans , Mesenchymal Stem Cells/cytology , Mesenchymal Stem Cells/pathology , Mice , Osteogenesis/genetics , Proto-Oncogene Proteins c-myc/adverse effects
2.
BMC Cancer ; 12: 488, 2012 Oct 22.
Article in English | MEDLINE | ID: mdl-23088614

ABSTRACT

BACKGROUND: As major regulators of normal chondrogenesis, the bone morphogenic protein (BMP) and transforming growth factor ß (TGFB) signaling pathways may be involved in the development and progression of central chondrosarcoma. In order to uncover their possible implication, the aim of this study was to perform a systematic quantitative study of the expression of BMPs, TGFBs and their receptors and to assess activity of the corresponding pathways in central chondrosarcoma. METHODS: Gene expression analysis was performed by quantitative RT-PCR in 26 central chondrosarcoma and 6 healthy articular cartilage samples. Expression of endoglin and nuclear localization of phosphorylated Smad1/5/8 and Smad2 was assessed by immunohistochemical analysis. RESULTS: The expression of TGFB3 and of the activin receptor-like kinase ALK2 was found to be significantly higher in grade III compared to grade I chondrosarcoma. Nuclear phosphorylated Smad1/5/8 and Smad2 were found in all tumors analyzed and the activity of both signaling pathways was confirmed by functional reporter assays in 2 chondrosarcoma cell lines. Immunohistochemical analysis furthermore revealed that phosphorylated Smad1/5/8 and endoglin expression were significantly higher in high-grade compared to low-grade chondrosarcoma and correlated to each other. CONCLUSIONS: The BMP and TGFß signaling pathways were found to be active in central chondrosarcoma cells. The correlation of Smad1/5/8 activity to endoglin expression suggests that, as described in other cell types, endoglin could enhance Smad1/5/8 signaling in high-grade chondrosarcoma cells. Endoglin expression coupled to Smad1/5/8 activation could thus represent a functionally important signaling axis for the progression of chondrosarcoma and a regulator of the undifferentiated phenotype of high-grade tumor cells.


Subject(s)
Antigens, CD/metabolism , Bone Morphogenetic Proteins/metabolism , Bone Neoplasms/metabolism , Chondrosarcoma/metabolism , Receptors, Cell Surface/metabolism , Smad1 Protein/metabolism , Transforming Growth Factor beta/metabolism , Bone Morphogenetic Proteins/genetics , Bone Neoplasms/genetics , Bone Neoplasms/pathology , Chondrosarcoma/genetics , Chondrosarcoma/pathology , Endoglin , Gene Expression Profiling , Humans , Immunohistochemistry , Kaplan-Meier Estimate , Signal Transduction , Smad2 Protein/metabolism , Transforming Growth Factor beta/genetics
3.
J Mol Med (Berl) ; 90(10): 1185-95, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22527881

ABSTRACT

Cartilage degeneration in the course of osteoarthritis (OA) is associated with an alteration in chondrocyte metabolism. In order to identify molecules representing putative key regulators for diagnosis and therapeutic intervention, we analyzed gene expression and microRNA (miR) levels in OA and normal knee cartilage using a customized cartilage cDNA array and quantitative RT-PCR. Among newly identified candidate molecules, H19, IGF2, and ITM2A were significantly elevated in OA compared to normal cartilage. H19 is an imprinted maternally expressed gene influencing IGF2 expression, whose transcript is a long noncoding (lnc) RNA of unknown biological function harboring the miR-675. H19 and IGF2 mRNA levels did not correlate significantly within cartilage samples suggesting that deregulation by imprinting effects are unlikely. A significant correlation was, however, observed for H19, COL2A1, and miR-675 expression levels in OA tissue, and functional regulation of these candidate molecules was assessed under anabolic and catabolic conditions. Culture of chondrocytes under hypoxic signaling showed co-upregulation of H19, COL2A1, and miRNA-675 levels in close correlation. Proinflammatory cytokines IL-1ß and TNF-α downregulated COL2A1, H19, and miR-675 significantly without close statistical correlation. In conclusion, this is the first report demonstrating deregulation of an lncRNA and its encoded miR in the context of OA-affected cartilage. Stress-induced regulation of H19 expression by hypoxic signaling and inflammation suggests that lncRNA H19 acts as a metabolic correlate in cartilage and cultured chondrocytes, while the miR-675 may indirectly influence COL2A1 levels. H19 may not only be an attractive marker for cell anabolism but also a potential target to stimulate cartilage recovery.


Subject(s)
MicroRNAs/metabolism , Osteoarthritis, Knee/metabolism , RNA, Long Noncoding/metabolism , Adolescent , Adult , Aged , Aged, 80 and over , Case-Control Studies , Cell Hypoxia , Cells, Cultured , Chondrocytes/metabolism , Collagen Type II/genetics , Collagen Type II/metabolism , Female , Gene Expression Regulation , High-Temperature Requirement A Serine Peptidase 1 , Humans , Insulin-Like Growth Factor II/genetics , Insulin-Like Growth Factor II/metabolism , Male , Membrane Proteins/genetics , Membrane Proteins/metabolism , MicroRNAs/genetics , Middle Aged , Osteoarthritis, Knee/pathology , RNA, Long Noncoding/genetics , Serine Endopeptidases/genetics , Serine Endopeptidases/metabolism , Transcriptome , Young Adult
4.
Acta Biomater ; 8(3): 1037-47, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22154865

ABSTRACT

Hydrophobins are fungal proteins with the ability to form immunologically inert membranes of high stability, properties that makes them attractive candidates for orthopaedic implant coatings. Cell adhesion on the surface of such implants is necessary for better integration with the neighbouring tissue; however, hydrophobin surfaces do not mediate cell adhesion. The aim of this project was therefore to investigate whether the class I hydrophobin DewA from Aspergillus nidulans can be functionalized for use on orthopaedic implant surfaces. DewA variants bearing either one RGD sequence or the laminin globular domain LG3 binding motif were engineered. The surfaces of both variants showed significantly increased adhesion of mesenchymal stem cells (MSCs), osteoblasts, fibroblasts and chondrocytes; in contrast, the insertion of binding motifs RGD and LG3 in DewA did not increase Staphylococcus aureus adhesion to the hydrophobin surfaces. Proliferation of MSCs and their osteogenic, chondrogenic and adipogenic differentiation potential were not affected on these surfaces. The engineered surfaces therefore enhanced MSC adhesion without interfering with their functionality or leading to increased risk of bacterial infection.


Subject(s)
Aspergillus nidulans/chemistry , Chondrocytes/cytology , Fibroblasts/cytology , Fungal Proteins/chemistry , Mesenchymal Stem Cells/cytology , Osteoblasts/cytology , Staphylococcus aureus/growth & development , Cell Adhesion , Cell Differentiation , Cell Proliferation , Cells, Cultured , Chondrocytes/metabolism , Female , Fibroblasts/metabolism , Humans , Male , Mesenchymal Stem Cells/metabolism , Osteoblasts/metabolism , Staphylococcus aureus/cytology , Surface Properties
5.
Stem Cell Res Ther ; 1(4): 31, 2010 Oct 13.
Article in English | MEDLINE | ID: mdl-20959030

ABSTRACT

Multipotent mesenchymal stromal cells (MSCs) are an attractive cell source for cell therapy in cartilage. Although their therapeutic potential is clear, the requirements and conditions for effective induction of chondrogenesis in MSCs and for the production of a stable cartilaginous tissue by these cells are far from being understood. Different sources of MSCs have been considered for cartilage tissue engineering, mainly based on criteria of availability, as for adipose tissue, or of proximity to cartilage and the joint environment in vivo, as for bone marrow and synovial tissues. Focussing on human MSCs, this review will provide an overview of studies featuring comparative analysis of the chondrogenic differentiation of MSCs from different sources. In particular, it will examine the influence of the cells' origin on the requirements for the induction of chondrogenesis and on the phenotype achieved by the cells after differentiation.


Subject(s)
Adipose Tissue/cytology , Bone Marrow Cells/cytology , Chondrogenesis/physiology , Mesenchymal Stem Cells/metabolism , Synovial Membrane/cytology , Cartilage/cytology , Cartilage/injuries , Cell Differentiation/physiology , Cell Proliferation , Cell- and Tissue-Based Therapy , Cells, Cultured , Chondrocytes/cytology , Humans , Mesenchymal Stem Cells/cytology , Regeneration , Tissue Engineering/methods
6.
Histopathology ; 56(5): 641-51, 2010 Apr.
Article in English | MEDLINE | ID: mdl-20459575

ABSTRACT

AIMS: The molecular mechanisms underlying the progression of central chondrosarcoma are so far poorly understood. The aim of this study was to identify genes involved in the progression of these tumours by comparison of gene expression and correlation of expression profiles to histological grade and clinical outcome. METHODS AND RESULTS: Array-based gene expression profiling of 19 chondrosarcoma samples was performed. Beside differences in the expression of cartilage matrix molecules, high-grade chondrosarcoma showed enhanced expression of the matrix metalloproteinase MMP-2 and of the hypoxia-inducible molecule galectin 1. Immunohistochemical analysis of galectin 1 and of further hypoxia-associated proteins was performed on 68 central and peripheral tumour samples. Hypoxia-inducible factor 1alpha (HIF-1alpha) activation was significantly elevated in high-grade central chondrosarcoma. A negative correlation of carbonic anhydrase IX expression to metastasis-free survival was independent of histological grade. CONCLUSIONS: The expression patterns identified in this study point towards a substantial role for angiogenic and hypoxic signalling in chondrosarcoma progression. The constitutive activation of the transcription factor HIF-1alpha in high-grade chondrosarcoma could play a central role in the regulation of cell metabolism and vascularization in these tumours and may, for this reason, represent a potential target for chondrosarcoma therapy.


Subject(s)
Bone Neoplasms/genetics , Cell Hypoxia/physiology , Chondrosarcoma/genetics , Gene Expression , Signal Transduction/physiology , Adult , Aged , Antigens, Neoplasm/genetics , Antigens, Neoplasm/metabolism , Bone Neoplasms/metabolism , Bone Neoplasms/pathology , Carbonic Anhydrase IX , Carbonic Anhydrases/genetics , Carbonic Anhydrases/metabolism , Chondrosarcoma/metabolism , Chondrosarcoma/pathology , Disease-Free Survival , Female , Galectins/metabolism , Gene Expression Profiling , Humans , Hypoxia , Hypoxia-Inducible Factor 1, alpha Subunit/genetics , Hypoxia-Inducible Factor 1, alpha Subunit/metabolism , Immunohistochemistry , Male , Matrix Metalloproteinase 2/genetics , Matrix Metalloproteinase 2/metabolism , Middle Aged , Neoplasm Staging , Oligonucleotide Array Sequence Analysis , Prognosis , RNA, Messenger/metabolism
7.
Differentiation ; 78(2-3): 108-15, 2009.
Article in English | MEDLINE | ID: mdl-19541402

ABSTRACT

Mesenchymal stem cells (MSC) from bone marrow or adipose tissue (ASC) are broadly discussed as a cell population able to support cartilage regeneration and thus represent interesting candidates for cell-based tissue engineering in cartilage. ASC could represent an easily accessible and therefore particularly suitable source of cells. Their chondrogenic differentiation potential is, however, lower than that of MSC. The aim of this work was to characterise ASC in comparison to MSC in order to identify genes which may be involved in mechanisms causing the altered chondrogenic potential of ASC. Representational difference analysis was used to identify genes with higher expression in undifferentiated ASC than in MSC. Expression levels of identified genes were confirmed by real-time RT-PCR. Integral membrane protein 2A (ITM2A) was higher expressed in expanded ASC than in MSC in a donor-independent manner. During early chondrogenic differentiation in spheroid cultures ITM2A levels remained low in MSC and a transient down-regulation occurred in ASC correlating with successful chondrogenesis. Persisting ITM2A levels were found in non-differentiating ASC. Consistent with this finding, forced expression of ITM2A in the mouse mesenchymal stem cell line C3H10T1/2 prevented chondrogenic induction. In conclusion, ITM2A may in early stages of differentiation be associated with an inhibition of the initiation of chondrogenesis and elevated expression of ITM2A in ASC may therefore be linked to the poorer chondrogenic differentiation potential of these cells.


Subject(s)
Adipose Tissue/cytology , Bone Marrow/growth & development , Cell Differentiation/physiology , Chondrogenesis , Membrane Proteins/metabolism , Mesenchymal Stem Cells/cytology , Adipose Tissue/physiology , Adult , Aged , Animals , Bone Marrow/physiology , Cells, Cultured , Humans , Immunoblotting , Membrane Proteins/genetics , Mice , Middle Aged , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Young Adult
8.
Stem Cells Dev ; 18(6): 881-92, 2009.
Article in English | MEDLINE | ID: mdl-19327011

ABSTRACT

Mesenchymal stromal cells (MSC) are an attractive source for cell therapy and tissue engineering of joint cartilage. Common chondrogenic in vitro protocols, however, induce hypertrophic markers like COL10A1, matrix metalloproteinase 13 (MMP13), and alkaline phosphatase (ALP) reminiscent of endochondral bone formation. To direct MSC toward articular chondrocytes more specifically, a better understanding of the regulatory steps is desirable. Proteases are important players in matrix remodeling, display inhibitory effects on growth plate development and MMP13 inhibition prevented hypertrophy of bovine chondrocytes. The aim of this study was to evaluate whether the activity of proteases and MMPs, especially MMP13, is crucial for the transition of MSC toward mature chondrocytes and could allow to selectively influence aspects of early and late chondrogenic differentiation. Protease inhibitors were added during MSC chondrogenesis and stage-specific markers were assessed by histology, qPCR, and ALP quantification. Chondrogenesis was little affected by leupeptin, pepstatin, or aprotinin. In contrast, broad spectrum pan-MMP inhibitors dose dependently suppressed proteoglycan deposition, collagen type II and type X staining, ALP activity, and reduced SOX9 and COL2A1 expression. A selective MMP13 inhibitor allowed chondrogenesis and showed only weak effects on ALP activity. In conclusion, transition of MSC toward mature chondrocytes in vitro depended on molecules suppressed by pan-MMP inhibitors identifying chondrogenic differentiation of MSC as a sophistically regulated process in which catabolic enzymes are capable to directly influence cellular fate. In future therapeutic applications of diseased joints, the tested MMP13-specific inhibitor promises suppression of collagen type II degradation without imposing a risk to impair MSC-driven regeneration processes.


Subject(s)
Cell Differentiation/drug effects , Chondrogenesis/drug effects , Matrix Metalloproteinase Inhibitors , Mesenchymal Stem Cells/cytology , Protease Inhibitors/pharmacology , Stromal Cells/cytology , Stromal Cells/drug effects , Adipose Tissue/cytology , Alkaline Phosphatase/metabolism , Catalytic Domain , Dose-Response Relationship, Drug , Gene Expression Regulation, Enzymologic/drug effects , Humans , Matrix Metalloproteinases/genetics , Matrix Metalloproteinases/metabolism , Mesenchymal Stem Cells/drug effects , Mesenchymal Stem Cells/enzymology , RNA, Messenger/genetics , RNA, Messenger/metabolism , Stromal Cells/enzymology
9.
Arthritis Rheum ; 58(9): 2743-53, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18759285

ABSTRACT

OBJECTIVE: Human articular chondrocytes do not express COL10A1 and do not undergo hypertrophy except in close vicinity to subchondral bone. In contrast, chondrocytes produced in vitro from mesenchymal stem cells (MSCs) show premature COL10A1 expression and cannot form stable ectopic cartilage transplants, which indicates that they may be phenotypically unstable and not suitable for treatment of articular cartilage lesions. CpG methylation established during natural development may play a role in suppression of COL10A1 expression and hypertrophy in human articular chondrocytes. This study was undertaken to compare gene methylation patterns and expression of COL10A1 and COL2A1 in chondrocyte and MSC populations, in order to determine whether failed genomic methylation patterns correlate with an unstable chondrocyte phenotype after chondrogenesis of MSCs. METHODS: COL10A1 and COL2A1 regulatory gene regions were computationally searched for CpG-rich regions. CpG methylation of genomic DNA from human articular chondrocytes, MSCs, and MSC-derived chondrocytes was analyzed by Combined Bisulfite Restriction Analysis and by sequencing of polymerase chain reaction fragments amplified from bisulfite-treated genomic DNA. RESULTS: The CpG island around the transcription start site of COL2A1 was unmethylated in all cell groups independent of COL2A1 expression, while 9 tested CpG sites in the sparse CpG promoter of COL10A1 were consistently methylated in human articular chondrocytes. Induction of COL10A1 expression during chondrogenesis of MSCs correlated with demethylation of 2 CpG sites in the COL10A1 promoter. CONCLUSION: Our findings indicate that methylation-based COL10A1 gene silencing is established in cartilage tissue and human articular chondrocytes. Altered methylation levels at 2 CpG sites of COL10A1 in MSCs and their demethylation during chondrogenesis may facilitate induction of COL10A1 as observed during in vitro chondrogenesis of MSCs.


Subject(s)
Chondrocytes/metabolism , Chondrogenesis/genetics , Collagen Type X/genetics , CpG Islands/genetics , DNA Methylation/genetics , Adult , Cartilage, Articular/metabolism , Collagen Type II/genetics , Collagen Type II/metabolism , Collagen Type X/metabolism , Female , Gene Expression/genetics , Gene Silencing/physiology , Humans , Mesenchymal Stem Cells/metabolism , Promoter Regions, Genetic , Reverse Transcriptase Polymerase Chain Reaction
10.
Arthritis Rheum ; 58(2): 467-74, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18240244

ABSTRACT

OBJECTIVE: Monolayer expansion of human articular chondrocytes (HACs) is known to result in progressive dedifferentiation of the chondrocytes and loss of their stable cartilage formation capacity in vivo. For an optimal outcome of chondrocyte-based repair strategies, HACs capable of ectopic cartilage formation may be required. This study was undertaken to identify secreted candidate molecules, in supernatants of cultured HACs, that could serve as predictors of the ectopic cartilage formation capacity of cells. METHODS: Standardized medium supernatants (n = 5 knee cartilage samples) of freshly isolated HACs (PD0) and of HACs expanded for 2 or 6 population doublings (PD2 and PD6, respectively) were screened by a multiplexed immunoassay for 15 distinct interleukins, 8 matrix metalloproteinases (MMPs), and 11 miscellaneous soluble factors. Cartilage differentiation markers such as cartilage oligomeric matrix protein and YKL-40 were determined by enzyme-linked immunosorbent assay. HACs from each culture were subcutaneously transplanted into SCID mice, and the capacity of the chondrocytes to form stable cartilage was examined histologically 4 weeks later. RESULTS: Whereas freshly isolated (PD0) HACs generated stable ectopic cartilage that was positive for type II collagen, none of the cell transplants at PD6 formed cartilaginous matrix. Loss of the ectopic cartilage formation capacity between PD0 and PD6 correlated with a drop in the secretion of MMP-3 to <10% of initial levels, whereas changes in the other investigated molecules were not predictive. Chondrocytes with MMP-3 levels of >or=20% of initial levels synthesized cartilaginous matrix, whereas those with low MMP-3 levels (<10% of initial levels) at PD2 failed to regenerate ectopic cartilage. CONCLUSION: Loss of the capacity for stable ectopic cartilage formation in the course of HAC dedifferentiation can be predicted by determining the relative levels of MMP-3, demonstrating that standardized culture supernatants can be used for quality control of chondrocytes dedicated for cell therapeutic approaches.


Subject(s)
Cartilage, Articular , Chondrocytes/enzymology , Chondrocytes/transplantation , Choristoma/metabolism , Matrix Metalloproteinase 3/metabolism , Adolescent , Adult , Aged , Aged, 80 and over , Animals , Biomarkers/metabolism , Cell Differentiation , Cell Transplantation/standards , Cells, Cultured , Child , Chondrocytes/cytology , Choristoma/pathology , Humans , Mice , Mice, SCID , Middle Aged , Predictive Value of Tests , Quality Control
11.
Lipids ; 38(11): 1133-42, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14733358

ABSTRACT

We explored whether CLA isomers and other C18 FA affect (i) lipid content and FA concentrations in total adipocyte lipids, (ii) FA synthesis from glucose in TAG and phospholipids of primary brown (BAT) and white adipocytes (WAT), and (iii) mRNA expression of uncoupling protein 1 (UCP1) in primary brown adipocytes of Djungarian hamsters (Phodopus sungorus). c9,t11-CLA, oleic, linoleic, and alpha-linolenic acid increased whereas t10,c12-CLA decreased lipid accumulation in both adipocyte types. t10,c12-CLA treatment affected FA composition mainly in BAT cells. CLA incorporation into lipids, in particular c9,t11-CLA, was higher in BAT. In both cell types, t10,c12-CLA treatment reduced the incorporation of glucose 13C carbon into FA of TAG and phospholipids, whereas c9,t11-CLA, linoleic, and alpha-linolenic acid either did not influence or dose-dependently increased glucose carbon incorporation into FA. UCP1 mRNA expression was inhibited by t10,c12-CLA but increased by c9,t11-CLA, linoleic, and alpha-linolenic acid. It is concluded that c9,t11-CLA and t10,c12-CLA have distinctly different effects on lipid metabolism in primary adipocytes. The effects of c9,t11-CLA are similar to those of other unsaturated C18 FA. The opposite effects of c9,t11-CLA and t10,c12-CLA are evident in both WAT and BAT cultures; however, brown adipocytes seem to be more susceptible to CLA treatment.


Subject(s)
Adipocytes/metabolism , Fatty Acids, Unsaturated/metabolism , Animals , Carrier Proteins/biosynthesis , Carrier Proteins/genetics , Cell Survival , Cricetinae , Ion Channels , Isomerism , Membrane Proteins/biosynthesis , Membrane Proteins/genetics , Mitochondrial Proteins , Organ Specificity , Phospholipids/metabolism , Triglycerides/metabolism , Uncoupling Protein 1
12.
Physiol Genomics ; 11(1): 31-6, 2002 Oct 02.
Article in English | MEDLINE | ID: mdl-12361988

ABSTRACT

Gene expression profiling through the application of microarrays provides comprehensive assessment of gene expression levels in a given tissue or cell population, as well as information on changes of gene expression in altered physiological or pathological situations. Microarrays are particularly suited to study interactions in the regulation of large numbers of different genes, since their expression is analyzed simultaneously. For improved understanding of the physiology of adipose tissue, and consequently obesity and diabetes, identification of covariability in gene expression was attempted by analysis of the individual variability of gene expression in subcutaneous white and brown fat of the Siberian dwarf hamster using microarrays containing approximately 300 cDNA fragments of adipose genes. No sex-dependant variability in gene expression could be found, and overall individual variability was rather low, with more than 80% of clones showing a coefficient of variation lower than 30%. Uncoupling protein 1 (UCP1) displayed a high variability of gene expression in brown fat, which was negatively correlated with the gene expression of complement factor B (FactB), implying a possible functional relationship.


Subject(s)
Adipose Tissue/metabolism , Genetic Variation , Adipocytes/metabolism , Adipose Tissue, Brown/metabolism , Animals , Carrier Proteins/biosynthesis , Carrier Proteins/genetics , Cells, Cultured , Complement Factor B/biosynthesis , Complement Factor B/genetics , Cricetinae , Female , Gene Expression Profiling , Ion Channels , Male , Membrane Proteins/biosynthesis , Membrane Proteins/genetics , Mitochondrial Proteins , Oligonucleotide Array Sequence Analysis , Phodopus , RNA, Messenger/biosynthesis , Sex Factors , Uncoupling Protein 1
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