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1.
Am J Med Genet A ; 185(1): 15-25, 2021 01.
Article in English | MEDLINE | ID: mdl-33029936

ABSTRACT

Biallelic mutations in SNORD118, encoding the small nucleolar RNA U8, cause leukoencephalopathy with calcifications and cysts (LCC). Given the difficulty in interpreting the functional consequences of variants in nonprotein encoding genes, and the high allelic polymorphism across SNORD118 in controls, we set out to provide a description of the molecular pathology and clinical spectrum observed in a cohort of patients with LCC. We identified 64 affected individuals from 56 families. Age at presentation varied from 3 weeks to 67 years, with disease onset after age 40 years in eight patients. Ten patients had died. We recorded 44 distinct, likely pathogenic, variants in SNORD118. Fifty two of 56 probands were compound heterozygotes, with parental consanguinity reported in only three families. Forty nine of 56 probands were either heterozygous (46) or homozygous (three) for a mutation involving one of seven nucleotides that facilitate a novel intramolecular interaction between the 5' end and 3' extension of precursor-U8. There was no obvious genotype-phenotype correlation to explain the marked variability in age at onset. Complementing recently published functional analyses in a zebrafish model, these data suggest that LCC most often occurs due to combinatorial severe and milder mutations, with the latter mostly affecting 3' end processing of precursor-U8.


Subject(s)
Calcinosis/genetics , Genetic Association Studies , Leukoencephalopathies/genetics , RNA, Small Nucleolar/genetics , Adolescent , Adult , Aged , Animals , Calcinosis/complications , Calcinosis/pathology , Child , Child, Preschool , Consanguinity , Disease Models, Animal , Female , Heterozygote , Humans , Infant , Infant, Newborn , Leukoencephalopathies/complications , Leukoencephalopathies/pathology , Male , Middle Aged , Pathology, Molecular , Young Adult , Zebrafish/genetics
2.
Int J Qual Health Care ; 31(7): 563-567, 2019 Aug 01.
Article in English | MEDLINE | ID: mdl-30295824

ABSTRACT

QUALITY ISSUE: Quality assessment is challenging in children with developmental disorders. Previously, a set of quality indicators (QIs) was developed and analyzed in terms of feasibility of use with patients with attention-deficit/hyperactivity disorder (ADHD). QI assessment turned out to be possible but highly complex. Thus, we compared different technologies for automated extraction of data for assessment of QIs. CHOICE OF SOLUTION: Four automated extraction technologies (regular expressions, Apache Solr, Apache Mahout, Apache OpenNLP) were compared with respect to their properties regarding the complexity of implementing the QI, the complexity of implementing a check module, the reliability and quality of results, the complexity of preparation of interdisciplinary medical reports, and the complexity of deployment and installation. IMPLEMENTATION: Twenty medical reports from different institutions were reviewed for compliance with three QIs by these technologies and compared with expert opinions. EVALUATION: Among the four technologies, Apache Solr had the best overall performance. For manual extraction of the three QIs, at least 77 s were necessary per medical report, whereas the prototype evaluated and extracted the QIs automatically in 8 s on average. Unexpectedly, different assessments of the degree of compliance by the experts turned out to be one of the stumbling blocks. An in-depth evaluation compared results on a semantic level. LESSONS LEARNED: It is possible to extract QIs by post-processing automated technologies. This approach can also be applied to other developmental disorders. However, a more uniform documentation throughout institutions involved will be necessary in order to implement this method in daily practice.


Subject(s)
Attention Deficit Disorder with Hyperactivity , Medical Records , Quality Indicators, Health Care , Child , Data Collection , Feasibility Studies , Humans
4.
Nat Genet ; 48(10): 1185-92, 2016 10.
Article in English | MEDLINE | ID: mdl-27571260

ABSTRACT

Although ribosomes are ubiquitous and essential for life, recent data indicate that monogenic causes of ribosomal dysfunction can confer a remarkable degree of specificity in terms of human disease phenotype. Box C/D small nucleolar RNAs (snoRNAs) are evolutionarily conserved non-protein-coding RNAs involved in ribosome biogenesis. Here we show that biallelic mutations in the gene SNORD118, encoding the box C/D snoRNA U8, cause the cerebral microangiopathy leukoencephalopathy with calcifications and cysts (LCC), presenting at any age from early childhood to late adulthood. These mutations affect U8 expression, processing and protein binding and thus implicate U8 as essential in cerebral vascular homeostasis.


Subject(s)
Cerebral Small Vessel Diseases/genetics , Leukoencephalopathies/genetics , Mutation , RNA, Small Nucleolar/genetics , Adolescent , Adult , Calcinosis/genetics , Calcinosis/pathology , Cell Line , Cerebral Small Vessel Diseases/pathology , Child , Child, Preschool , Chromosomes, Human, Pair 17 , Cohort Studies , Cysts/genetics , Cysts/pathology , Exome , Female , Genetic Linkage , Genome, Human , Humans , Infant , Leukoencephalopathies/pathology , Male , Middle Aged , Sequence Analysis, DNA , Young Adult
5.
Orphanet J Rare Dis ; 11(1): 104, 2016 07 29.
Article in English | MEDLINE | ID: mdl-27473762

ABSTRACT

BACKGROUND: The nosological assignment of congenital ocular motor apraxia type Cogan (COMA) is still controversial. While regarded as a distinct entity by some authorities including the Online Mendelian Inheritance in Man catalog of genetic disorders, others consider COMA merely a clinical symptom. METHODS: We performed a retrospective multicenter data collection study with re-evaluation of clinical and neuroimaging data of 21 previously unreported patients (8 female, 13 male, ages ranging from 2 to 24 years) diagnosed as having COMA. RESULTS: Ocular motor apraxia (OMA) was recognized during the first year of life and confined to horizontal pursuit in all patients. OMA attenuated over the years in most cases, regressed completely in two siblings, and persisted unimproved in one individual. Accompanying clinical features included early onset ataxia in most patients and cognitive impairment with learning disability (n = 6) or intellectual disability (n = 4). Re-evaluation of MRI data sets revealed a hitherto unrecognized molar tooth sign diagnostic for Joubert syndrome in 11 patients, neuroimaging features of Poretti-Boltshauser syndrome in one case and cerebral malformation suspicious of a tubulinopathy in another subject. In the remainder, MRI showed vermian hypo-/dysplasia in 4 and no abnormalities in another 4 patients. There was a strong trend to more severe cognitive impairment in patients with Joubert syndrome compared to those with inconclusive MRI, but otherwise no significant difference in clinical phenotypes between these two groups. CONCLUSIONS: Systematical renewed analysis of neuroimaging data resulted in a diagnostic reappraisal in the majority of patients with early-onset OMA in the cohort reported here. This finding poses a further challenge to the notion of COMA constituting a separate entity and underlines the need for an expert assessment of neuroimaging in children with COMA, especially if they show cognitive impairment.


Subject(s)
Apraxias/congenital , Cogan Syndrome/diagnosis , Abnormalities, Multiple/diagnosis , Abnormalities, Multiple/pathology , Adolescent , Adult , Apraxias/diagnosis , Apraxias/pathology , Cerebellum/abnormalities , Cerebellum/pathology , Child , Child, Preschool , Cogan Syndrome/pathology , Eye Abnormalities/diagnosis , Eye Abnormalities/pathology , Female , Humans , Kidney Diseases, Cystic/diagnosis , Kidney Diseases, Cystic/pathology , Magnetic Resonance Imaging , Male , Neuroimaging , Retina/abnormalities , Retina/pathology , Retrospective Studies , Young Adult
6.
Nat Genet ; 44(3): 338-42, 2012 Jan 22.
Article in English | MEDLINE | ID: mdl-22267198

ABSTRACT

Coats plus is a highly pleiotropic disorder particularly affecting the eye, brain, bone and gastrointestinal tract. Here, we show that Coats plus results from mutations in CTC1, encoding conserved telomere maintenance component 1, a member of the mammalian homolog of the yeast heterotrimeric CST telomeric capping complex. Consistent with the observation of shortened telomeres in an Arabidopsis CTC1 mutant and the phenotypic overlap of Coats plus with the telomeric maintenance disorders comprising dyskeratosis congenita, we observed shortened telomeres in three individuals with Coats plus and an increase in spontaneous γH2AX-positive cells in cell lines derived from two affected individuals. CTC1 is also a subunit of the α-accessory factor (AAF) complex, stimulating the activity of DNA polymerase-α primase, the only enzyme known to initiate DNA replication in eukaryotic cells. Thus, CTC1 may have a function in DNA metabolism that is necessary for but not specific to telomeric integrity.


Subject(s)
Abnormalities, Multiple/genetics , Genetic Predisposition to Disease/genetics , Retinal Telangiectasis/genetics , Telomere-Binding Proteins/genetics , Telomere/pathology , Base Sequence , Flow Cytometry , Histones/metabolism , Molecular Sequence Data , Retinal Telangiectasis/pathology , Sequence Analysis, DNA/methods
7.
Arthritis Rheum ; 62(5): 1469-77, 2010 May.
Article in English | MEDLINE | ID: mdl-20131292

ABSTRACT

OBJECTIVE: Aicardi-Goutières syndrome (AGS) is an early-onset encephalopathy resembling congenital viral infection that is characterized by basal ganglia calcifications, loss of white matter, cerebrospinal fluid (CSF) lymphocytosis, and elevated interferon-alpha levels in the CSF. Studies have shown that AGS is an autosomal-recessive disease linked to mutations in 5 genes, encoding the 3'-repair DNA exonuclease 1 (TREX1), the 3 subunits of ribonuclease H2 (RNASEH2A-C), and sterile alpha motif domain and HD domain-containing protein 1 (SAMHD1). In this study we further characterized the phenotypic spectrum of this disease. METHODS: Clinical and laboratory data were obtained from 26 patients fulfilling the clinical diagnostic criteria for AGS. Genomic DNA was screened for mutations in all 5 AGS genes by direct sequencing, and sera were analyzed for autoantibodies. RESULTS: In 20 patients with AGS, 20 mutations, 12 of which were novel, were identified in all 5 AGS genes. Clinical and laboratory investigations revealed a high prevalence of features (some not previously described in patients with AGS) that are commonly seen in patients with systemic lupus erythematosus (SLE), such as thrombocytopenia, leukocytopenia, antinuclear antibodies, erythematous lesions, oral ulcers, and arthritis, which were observed in 12 (60%) of 20 patients with AGS. Moreover, the coexistence of AGS and SLE, was for the first time, demonstrated in 2 patients with molecularly proven AGS. CONCLUSION: These findings expand the phenotypic spectrum of lupus erythematosus in AGS and provide further insight into its disease mechanisms by showing that activation of the innate immune system as a result of inherited defects in nucleic acid metabolism could lead to systemic autoimmunity.


Subject(s)
Autoimmune Diseases of the Nervous System/genetics , Brain Diseases/genetics , Exodeoxyribonucleases/genetics , Lupus Erythematosus, Systemic/genetics , Monomeric GTP-Binding Proteins/genetics , Phosphoproteins/genetics , Ribonuclease H/genetics , Adolescent , Adult , Autoimmune Diseases of the Nervous System/epidemiology , Autoimmune Diseases of the Nervous System/pathology , Brain Diseases/epidemiology , Brain Diseases/pathology , Child , Child, Preschool , Dystonia/epidemiology , Dystonia/genetics , Female , Genetic Predisposition to Disease/epidemiology , Humans , Infant , Lupus Erythematosus, Systemic/epidemiology , Lupus Erythematosus, Systemic/pathology , Magnetic Resonance Imaging , Male , Muscle Hypotonia/epidemiology , Muscle Hypotonia/genetics , Mutation, Missense , Phenotype , Polymorphism, Single Nucleotide , Prevalence , SAM Domain and HD Domain-Containing Protein 1 , Young Adult
8.
Pediatr Neurol ; 29(3): 236-8, 2003 Sep.
Article in English | MEDLINE | ID: mdl-14629908

ABSTRACT

Corticosteroids and intravenous immunoglobulins belong to the first line of treatment in chronic inflammatory demyelinating polyneuropathy. In patients with a progressive course, plasma exchange and immunomodulatory drugs are added to the regimen. To reduce the side effects of long-term oral prednisolone, high-dose pulsatile intravenous methylprednisolone treatment has been advocated. We report two children with chronic inflammatory demyelinating polyneuropathy who, after high-dose intravenous pulsatile methylprednisolone, experienced a significant clinical deterioration with profound loss of muscle strength. Both patients improved after changing treatment to immunoglobulins in one and cyclosporine combined with immunoglobulins and oral prednisolone in the other.


Subject(s)
Muscle Weakness/chemically induced , Polyradiculoneuropathy, Chronic Inflammatory Demyelinating/drug therapy , Steroids/administration & dosage , Steroids/adverse effects , Child , Child, Preschool , Disease Progression , Female , Humans , Male , Muscle Weakness/pathology , Polyradiculoneuropathy, Chronic Inflammatory Demyelinating/pathology
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