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1.
Mol Phylogenet Evol ; 191: 107994, 2024 Feb.
Article in English | MEDLINE | ID: mdl-38113961

ABSTRACT

Deep-water coral reefs are found worldwide and harbor biodiversity levels that are comparable to their shallow-water counterparts. However, the genetic diversity and population structure of deep-water species remain poorly explored, and historical taxonomical issues still need to be resolved. Here we used microsatellite markers as well as ultraconserved elements (UCE) and exons to shed light on the population structure, genetic diversity, and phylogenetic position of the genus Madrepora, which contains M. oculata, one of the most widespread scleractinian species. Population structure of 107 samples from three Southwestern Atlantic sedimentary basins revealed the occurrence of a cryptic species, herein named M. piresae sp. nov. (authored by Kitahara, Capel and Zilberberg), which can be found in sympatry with M. oculata. Phylogeny reconstructions based on 134 UCEs and exon regions corroborated the population genetic data, with the recovery of two well-supported groups, and reinforced the polyphyly of the family Oculinidae. In order to better accommodate the genus Madrepora, while reducing taxonomical confusion associated with the name Madreporidae, we propose the monogeneric family Bathyporidae fam. nov. (authored by Kitahara, Capel, Zilberberg and Cairns). Our findings advance the knowledge on the widespread deep-water genus Madrepora, resolve a long-standing question regarding the phylogenetic position of the genus, and highlight the need of a worldwide review of the genus.


Subject(s)
Anthozoa , Water , Animals , Phylogeny , Coral Reefs , Biodiversity
4.
Zootaxa ; 4979(1): 212214, 2021 May 28.
Article in English | MEDLINE | ID: mdl-34187004

ABSTRACT

In the 20 year history of Zootaxa, thirty-two papers have been published having Scleractinia as its primary focus. Twenty-four of the 32 scleractinian papers deal with Recent taxa, most of which belonging to shallow-water, reef corals. The 8 publications dealing with fossil Scleractinia include 3 monographic works, three papers discussing nomenclatural issues of individual taxa, and 2 papers deal with various aspects of select genera.


Subject(s)
Anthozoa/classification , Animals , Coral Reefs , Fossils , Periodicals as Topic , Phylogeny
5.
Zookeys ; 1066: 1-198, 2021.
Article in English | MEDLINE | ID: mdl-36479134

ABSTRACT

Globally, South Africa ranks in the top five countries regarding marine species richness per unit area. Given the high diversity, it is not surprising that many invertebrate taxa in the region are poorly characterised. The South African azooxanthellate Scleractinia (Anthozoa) is one such taxonomic group, and was last reviewed by Boshoff in 1980. Although more recent regional publications have reported on some species, there has not been a faunistic review that accounts for the country's species diversity since then. Moreover, numerous unidentified specimens representing more than three decades of sampling effort have accumulated. In this study the authors update the state of knowledge of South African azooxanthellate coral species. Specimens, particularly those within the extensive collections of the Iziko South African and Smithsonian museums, were morphologically examined and identified. Other data considered included historic data represented as imagery data, associated species data from recent research surveys, and the scientific literature. To date, the study has increased the total number of known species from 77 to 108 across eleven families, 28 new South African records, and three are new species with one new genus.

6.
Sci Rep ; 10(1): 15356, 2020 09 18.
Article in English | MEDLINE | ID: mdl-32948822

ABSTRACT

This paper reports a deep-water coral framework (a single colonial bush or a larger bioconstruction of coral covering the sea bottom), formed entirely by the scleractinian coral Eguchipsammia fistula (Alcock, 1902) (Dendrophylliidae), in the northern Red Sea waters of Saudi Arabia at a depth of about 640 m. The framework consists of mostly live corals with a total area of about 10 m2 and the length of the individual coral branches range from 12 to 30 cm. Although E. fistula is ubiquitous, this discovery is the second record of a framework formed by this species and the first discovery of a large living reef in the Red Sea. The results of the genetic study indicate the potential existence of a genetic variation of E. fistula in the Red Sea. This discovery implies that the Red Sea has favorable habitats for framework-forming DWC species and highlights the need for conducting more systematic surveys for understanding their distribution, abundance, and ecology.


Subject(s)
Anthozoa/classification , Anthozoa/physiology , Ecosystem , Seawater/analysis , Animals , Indian Ocean , Oceanography , Saudi Arabia
7.
Zookeys ; (822): 1-15, 2019.
Article in English | MEDLINE | ID: mdl-30766419

ABSTRACT

A history of the description of the 50 valid species of Narella is given, beginning with the first species described in 1860. To help differentiate the various species, a tabular and a polychotomous key are provided. The species in the keys are arranged using nine characters or character sets that are believed to be of value at the species level. New characters or new significance given to previously described characters used in our keys include: 1) the nature of the dorsolateral edge of the basal scale, being ridged or not, 2) the thickness of the body wall scales, and 3) the arrangement of the coenenchymal scales (imbricate or mosaic), their thickness (thin or massive), and their outer surface ornamentation (ridged or not). All characters used in the keys are illustrated.

8.
Zootaxa ; 4441(3): 529-536, 2018 Jun 28.
Article in English | MEDLINE | ID: mdl-30313999

ABSTRACT

As part of an ongoing reassessment of the genus Callogorgia, we describe C. lucaya sp. nov. from the western Atlantic, with a distribution so far restricted to the Straits of Florida and northern Caribbean. The species was partially described in an unfinished manuscript of Dr. Frederick Bayer and differs from all other western Atlantic species by commonly lacking outer-lateral body wall scales, having a small number of abaxials, and having body wall sclerites that are externally almost smooth. (Species Zoobank LSID: urn:lsid:zoobank.org:act:CF8F92FC-8F8A-4A8C-AF4A-52E12B58F7B1).


Subject(s)
Anthozoa , Decapoda , Animals , Caribbean Region , Florida
9.
BMC Evol Biol ; 18(1): 66, 2018 05 02.
Article in English | MEDLINE | ID: mdl-29716521

ABSTRACT

BACKGROUND: Previous phylogenetic analyses of primnoid octocorals utilizing morphological or molecular data have each recovered evolutionary relationships among genera that are largely incongruent with each other, with some exceptions. In an effort to reconcile molecular-based phylogenies with morphological characters, phylogenetic reconstructions were performed with 33 of 43 primnoid genera using four loci (mtMutS, COI, 28S and 18S), and ancestral state reconstructions were performed using 9 taxonomically relevant characters. In addition, an updated illustrated key to the current 48 genus-level (43 genera, 5 subgenera) primnoids is presented. RESULTS: Ancestral state reconstruction recovered the ancestral colony shape of primnoids as dichotomous planar. Convergence was detected among all 9 characters, and reversals to the character state of the common ancestor occurred in 4 characters. However, some characters were found to be informative. For example, the weak ascus scale of Metafannyella is not likely homologous to the ascus scales of Onogorgia and Fannyella, and the monophyly of two subgenera within Thouarella, which contain polyps in either whorls or an isolated arrangement, was supported. Phylogenetic analyses were generally consistent with previous studies, and resulted in the synonymy of one genus and a subgenus, the elevation of two subgenera, and the transfer of two species back to an original genus. For example, body wall ornamentation of Fanellia was re-evaluated, indicating a synonymy with Callogorgia; the utility of polyp arrangement for the subgenus Plumarella (Dicholaphis) was not supported, and is synonymized with the nominate subgenus Plumarella (Plumarella); the subgenera Plumarella (Faxiella) and Plumarella (Verticillata) are raised to generic status; and the two Plumarella species (P. diadema and P. undulata) are transferred back to Thouarella based on the homology of their marginal scales. CONCLUSIONS: Altogether, and similar to other octocorallian groups, these results indicate that many of the morphological characters examined among primnoids, particularly colony morphology, are labile and exhibit complex evolutionary histories. However, some morphological characters such as coordination of polyps, presence of the ascus body wall scale, number of rows of body wall scales, and number of marginal scales help identify many clades, and are suitable for robust systematic assessments among primnoids.


Subject(s)
Anthozoa/classification , Phylogeny , Animals , Anthozoa/anatomy & histology , Anthozoa/genetics , Bayes Theorem , Sequence Analysis, DNA , Species Specificity
11.
Zookeys ; (729): 1-46, 2018.
Article in English | MEDLINE | ID: mdl-29416390

ABSTRACT

Thirteen species of deep-water calcaxonian octocorals belonging to the families Primnoidae, Chrysogorgiidae, and Isididae collected from off the Galápagos and Cocos Islands are described and figured. Seven of these species are described as new; nine of the 13 are not known outside the Galápagos region. Of the four species occurring elsewhere, two also occur in the eastern Pacific, one off Hawaii, and one from off Antarctica. A key to the 22 Indo-Pacific species of Callogorgia is provided to help distinguish those species.

12.
Zootaxa ; 4532(1): 1-43, 2018 Dec 16.
Article in English | MEDLINE | ID: mdl-30647372

ABSTRACT

This paper discusses and illustrates the 23 primnoid species collected by the R/V Okeanos Explorer in the US marine protected areas in the central and western Pacific, ranging from the Musician Seamounts in the north to American Samoa to the south, and the northern Mariana Islands to the west (CAPSTONE expeditions, 2015-2017). In situ photographs are provided for most species. Thirteen of the 23 species are described as new, as well as two new genera. One new genus, Macroprimnoa, possesses some of the largest polyps in the family. A dichotomous key is provided to facilitate comparisons among the 27 species of Calyptrophora. An update of the abyssal octocorallian species occurring deeper than 3000 m is provided, increasing that number from 39 to 49 species. The character of the articulating ridge, found on the distal edge of the basal body wall scales, is re-evaluated, resulting in four genera having this character state, and requiring the description of the new genus Pseudonarella.


Subject(s)
Anthozoa , Expeditions , American Samoa , Animals , Micronesia
14.
Zookeys ; (668): 1-10, 2017.
Article in English | MEDLINE | ID: mdl-28824278

ABSTRACT

A new genus and species of unbranched golden coral, Flagelligorgia gracilis, is described based on several specimens collected off the southeastern coast of the United States. The genus is provisionally included in the family Chrysogorgiidae, pending molecular confirmation. Flagelligorgia morphologically resembles other unbranched chrysogorgiids, such as Distichogorgia, Chalcogorgia, Helicogorgia and Radicipes, to which it is compared. The type species is illustrated and its distribution mapped.

15.
Zookeys ; (562): 1-48, 2016.
Article in English | MEDLINE | ID: mdl-27006620

ABSTRACT

The transversely-dividing flabellids consist of five genera (Truncatoflabellum, Placotrochides, Blastotrochus, Placotrochus, and Falcatoflabellum) and 45 species. A dichotomous key is provided for these five genera as well as the species of the genus Truncatoflabellum and Placotrochides, the other three genera being monotypic. A tabular key is also provided for the 38 species of Truncatoflabellum. Two new combinations are suggested (Truncatoflabellum gambierense and Truncatoflabellum sphenodeum) and two new species are described (Truncatoflabellum duncani and Truncatoflabellum mozambiquensis). All but one species are illustrated and accompanied by their known distribution and a guide to the pertinent literature for the species. New records of 19 of the 45 species are listed. The transversely-dividing flabellids range from the Middle Eocene to the Recent at depths of 2-3010 m, and constitute 60% of the 65 known extant species of transversely-dividing Scleractinia.

16.
Sci Data ; 3: 160017, 2016 03 29.
Article in English | MEDLINE | ID: mdl-27023900

ABSTRACT

Trait-based approaches advance ecological and evolutionary research because traits provide a strong link to an organism's function and fitness. Trait-based research might lead to a deeper understanding of the functions of, and services provided by, ecosystems, thereby improving management, which is vital in the current era of rapid environmental change. Coral reef scientists have long collected trait data for corals; however, these are difficult to access and often under-utilized in addressing large-scale questions. We present the Coral Trait Database initiative that aims to bring together physiological, morphological, ecological, phylogenetic and biogeographic trait information into a single repository. The database houses species- and individual-level data from published field and experimental studies alongside contextual data that provide important framing for analyses. In this data descriptor, we release data for 56 traits for 1547 species, and present a collaborative platform on which other trait data are being actively federated. Our overall goal is for the Coral Trait Database to become an open-source, community-led data clearinghouse that accelerates coral reef research.


Subject(s)
Anthozoa , Databases, Factual , Animals , Coral Reefs , Ecosystem , Oceans and Seas , Phylogeny
17.
Zootaxa ; 3919(2): 327-34, 2015 Feb 17.
Article in English | MEDLINE | ID: mdl-25781130

ABSTRACT

A new species, Swiftia comauensis, is described from Chile. It occurs in shallow waters from 18 to 59 m in the Patagonian fjord region and seems to be endemic to the northern part of the region. The species is characterized by having straggly colonies with sparse branching and long drooping branches, prominent polyp mounds, and long, thin spindles; the colonies are bright orange with pale yellow polyp mounds. A sharp decline in colony abundance was observed between 2003 and 2013, and in January 2014 a proposal was submitted to the IUCN for the addition of this taxon to the Red List of Threatened Species.


Subject(s)
Anthozoa/anatomy & histology , Endangered Species , Animals , Chile
18.
Zookeys ; (472): 1-25, 2015.
Article in English | MEDLINE | ID: mdl-25632246

ABSTRACT

A number of stylasterid corals are known to act as host species and create refuges for a variety of mobile and sessile organisms, which enhances their habitat complexity. These include annelids, anthozoans, cirripeds, copepods, cyanobacteria, echinoderms, gastropods, hydroids and sponges. Here we report the first evidence of a diverse association between stylasterids and scalpellid pedunculate barnacles and describe a new stylasterid species, Errinalabrosa, from the Tristan da Cunha Archipelago. Overall, five stylasterid species are found to host eight scalpellid barnacles from several biogeographic regions in the southern hemisphere (Southern Ocean, temperate South America and the southern Indo-Pacific realms). There is an apparent lack of specificity in this kind of association and different grades of reaction to the symbiosis have been observed in the coral. These records suggest that the association between pedunculate barnacles and hard stylasterid corals has a wide distribution among different biogeographic realms and that it is relatively rare and confined largely to deep water.

19.
Zootaxa ; 3900(4): 581-91, 2014 Dec 24.
Article in English | MEDLINE | ID: mdl-25543758

ABSTRACT

Leptohelia flexibilis gen. nov. et sp. nov., the first stylasterid with a combined calcified and non-calcified skeleton, is described from seamounts and the slope off the islands of New Caledonia, in the southwestern Pacific. The new species is distinguished from all other species of the family Stylasteridae by having a non-calcified organic axis, internal to the basal portion of the calcified corallum. The internal axis is flexible and enclosed by a series of up to 10 calcified annuli, allowing passive lateral bending of the colony. Molecular phylogenetic analyses confirm that Leptohelia flexibilis is a stylasterid coral and reveal that the species is closely related to Leptohelia microstylus comb. nov., a southwestern Pacific stylasterid that lacks an internal axis.


Subject(s)
Hydrozoa/classification , Animal Distribution , Animal Structures/anatomy & histology , Animal Structures/growth & development , Animals , Body Size , Female , Hydrozoa/anatomy & histology , Hydrozoa/genetics , Hydrozoa/growth & development , Male , Organ Size , Phylogeny
20.
Zootaxa ; 3691: 1-57, 2013.
Article in English | MEDLINE | ID: mdl-26167568

ABSTRACT

We describe and figure the 20 species of stylasterid hydrozoans known from South Africa. These consist of seven new species, six range extensions, and seven species previously known from South African. Most of the specimens reported resulted from expeditions of the Pieter Faure (1898-1903) and Meiring Naude (1975-1987), and are deposited primarily in the South African Museum (Cape Town). A replacement name (Errina australis) is proposed for the junior homonym Errina hicksoni Cairns, 1991. A brief history of species discovery of the South African stylasterids is presented. The new morphological term dactyloglossa is introrduced to define a baffle-like structure found in dactylopores of some species. Of the 20 South African species, 12 (60%) are not yet known outside that area. Three patterns of distribution were noted: species confined to the tropical region of South Africa, those found in both the tropical and warm temperate regions of S. Africa, and those found only in the warm temperate regions, three in the latter group sharing their distribution with cold temperate southern South America and two with warm temperate New Zealand, representing a circum-southern temperate distribution.


Subject(s)
Hydrozoa/classification , Animal Distribution , Animal Structures/anatomy & histology , Animal Structures/growth & development , Animals , Body Size , Ecosystem , Female , Hydrozoa/anatomy & histology , Hydrozoa/growth & development , Male , Organ Size , Phylogeny , South Africa
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