Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 4 de 4
Filter
Add more filters










Database
Language
Publication year range
1.
Environ Pollut ; 205: 269-77, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26099458

ABSTRACT

Using enriched stable (201)Hg injections into intact sediment cores, we provide the first reported Hg methylation potential rate constants (km) in prairie wetland ponds (0.016-0.17 d(-1)). Our km values were similar to other freshwater wetlands and did not differ in ponds categorized with high compared to low surface water concentrations of sulphate. Sites with high sulphate had higher proportions of methylmercury (MeHg) in sediment (2.9 ± 1.6% vs. 1.0 ± 0.3%) and higher surface water MeHg concentrations (1.96 ± 1.90 ng L(-1)vs. 0.56 ± 0.55 ng L(-1)). Sediment-porewater partitioning coefficients were small, and likely due to high ionic activity. Our work suggests while km measurements are useful for understanding mercury cycling processes, they are less important than surface water MeHg concentrations for assessing MeHg risks to biota. Significant differences in MeHg concentrations between sites with high and low sulphate concentrations may also inform management decisions concerning wetland remediation and creation.


Subject(s)
Geologic Sediments/chemistry , Methylmercury Compounds/analysis , Sulfates/analysis , Water Pollutants, Chemical/analysis , Wetlands , Environmental Monitoring , Mercury Isotopes/analysis , Methylation , Ponds/analysis , Saskatchewan
2.
J Mol Biol ; 372(4): 1097-1107, 2007 Sep 28.
Article in English | MEDLINE | ID: mdl-17692335

ABSTRACT

The variability in amino acid axial rise per residue of the collagen helix is a potentially important parameter that is missing in many structural models of fibrillar collagen to date. The significance of this variability has been supported by evidence from collagen axial structures determined by electron microscopy and X-ray diffraction, as well as studies of the local sequence-dependent conformation of the collagen helix. Here, sequence-dependent variation of the axial rise per residue was used to improve the fit between simulated diffraction patterns derived from model structures of the axially projected microfibrillar structure and the observed X-ray diffraction pattern from hydrated rat tail tendon. Structural models were adjusted using a genetic algorithm that allowed a wide range of structures to be tested efficiently. The results show that variation of the axial rise per residue could reduce the difference metric between model and observed data by up to 50%, indicating that such a variable is a necessary part of fibril model structure building. The variation in amino acid translation was also found to be influenced by the number of proline and hydroxyproline residues in the triple helix structure.


Subject(s)
Amino Acids/chemistry , Collagen Type I/chemistry , Collagen Type I/ultrastructure , Microfibrils/ultrastructure , Protein Structure, Secondary , Algorithms , Amino Acid Sequence , Animals , Collagen Type I/genetics , Models, Biological , Rats , X-Ray Diffraction
3.
J Struct Biol ; 143(2): 118-23, 2003 Aug.
Article in English | MEDLINE | ID: mdl-12972348

ABSTRACT

Feathers are composed of a structure that, whilst being very light, is able to withstand the large aerodynamic forces exerted upon them during flight. To explore the contribution of molecular orientation to feather keratin mechanical properties, we have examined the nanoscopic organisation of the keratin molecules by X-ray diffraction techniques and have confirmed a link between this and the Young's modulus of the feather rachis. Our results indicate that along the rachis length, from calamus to tip, the keratin molecules become more aligned than at the calamus before returning to a state of higher mis-orientation towards the tip of the rachis. We have also confirmed the general trend of increasing Young's modulus with distance along the rachis. Furthermore, we report a distinct difference in the patterns of orientation of beta-keratin in the feathers of flying and flightless birds. The trend for increased modulus along the feathers of volant birds is absent in the flightless ostrich.


Subject(s)
Feathers/chemistry , Keratins/chemistry , Animals , Birds/anatomy & histology , Geese , Pliability , Species Specificity , Struthioniformes , X-Ray Diffraction
4.
J Struct Biol ; 137(1-2): 15-22, 2002.
Article in English | MEDLINE | ID: mdl-12064929

ABSTRACT

The molecular packing arrangement within collagen fibrils has a significant effect on the tensile properties of tissues. To date, most studies have focused on homotypic fibrils composed of type I collagen. This study investigates the packing of type I/III collagen molecules in heterotypic fibrils of colonic submucosa using a combination of X-ray diffraction data, molecular model building, and simulated X-ray diffraction fibre diagrams. A model comprising a 70-nm-diameter D- (approximately 65 nm) axial periodic structure containing type I and type III collagen chains was constructed from amino acid scattering factors organised in a liquid-like lateral packing arrangement simulated using a classical Lennard-Jones potential. The models that gave the most accurate correspondence with diffraction data revealed that the structure of the fibril involves liquid-like lateral packing combined with a constant helical inclination angle for molecules throughout the fibril. Combinations of type I:type III scattering factors in a ratio of 4:1 gave a reasonable correspondence with the meridional diffraction series. The attenuation of the meridional intensities may be explained by a blurring of the electron density profile of the D period caused by nonspecific or random interactions between collagen types I and III in the heterotypic fibril.


Subject(s)
Collagen Type III/chemistry , Collagen Type I/chemistry , Fibrillar Collagens/chemistry , Animals , Biophysical Phenomena , Biophysics , Collagen Type I/ultrastructure , Collagen Type III/ultrastructure , Colon/metabolism , Fibrillar Collagens/ultrastructure , Intestinal Mucosa/metabolism , Models, Molecular , Rats , Scattering, Radiation , X-Ray Diffraction , X-Rays
SELECTION OF CITATIONS
SEARCH DETAIL