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1.
Biochimie ; 211: 16-24, 2023 Aug.
Article in English | MEDLINE | ID: mdl-36828153

ABSTRACT

Trichoderma reesei (anamorph Hypocrea jecorina) produces an extracellular beta-galactosidase from Glycoside Hydrolase Family 35 (TrBga1). Hydrolysis of xyloglucan oligosaccharides (XGOs) by TrBga1 has been studied by hydrolysis profile analysis of both tamarind (Tamarindus indica) and jatobá (Hymenaea courbaril) seed storage xyloglucans using PACE and MALDI-ToF-MS for separation, quantification and identification of the hydrolysis products. The TrBga1 substrate preference for galactosylated oligosaccharides from both the XXXG- and XXXXG-series of jatobá xyloglucan showed that the doubly galactosylated oligosaccharides were the first to be hydrolyzed. Furthermore, the TrBga1 showed more efficient hydrolysis against non-reducing end dexylosylated oligosaccharides (GLXG/GXLG and GLLG). This preference may play a key role in xyloglucan degradation, since galactosyl removal alleviates steric hindrance for other enzymes in the xyloglucanolytic complex resulting in complete xyloglucan mobilization. Indeed, mixtures of TrBga1 with the α-xylosidase from Escherichia coli (YicI), which shows a preference towards non-galactosylated xyloglucan oligosaccharides, reveals efficient depolymerization when either enzyme is applied first. This understanding of the synergistic depolymerization contributes to the knowledge of plant cell wall structure, and reveals possible evolutionary mechanisms directing the preferences of debranching enzymes acting on xyloglucan oligosaccharides.


Subject(s)
Tamarindus , Tamarindus/metabolism , Polysaccharides/chemistry , Glycoside Hydrolases , Xylans/metabolism , Oligosaccharides/chemistry , Oligosaccharides/metabolism , beta-Galactosidase/chemistry
2.
Carbohydr Polym ; 284: 119150, 2022 May 15.
Article in English | MEDLINE | ID: mdl-35287891

ABSTRACT

Xyloglucan is ubiquitous in the cell walls of land plants and is also an essential storage polymer in seeds of many species. We studied the hydrolysis of the non-reducing end xylosyl residue of xyloglucan oligosaccharides (XGOs) by the Escherichia coli α-xylosidase (YicI). Electrospray Ionization Tandem Mass Spectrometry (ESI-MS/MS) and ion fragmentation analysis together with high performance anion exchange chromatography with pulsed amperometric detection revealed that YicI preferentially removes the xylosyl residue from the glycosyl residue of non-galactosylated oligosaccharides. The YicI shows decreasing activity against the galactosylated oligosaccharides XXXG>XXLG≥XLXG. Studies of the XGOs interaction with active site residues by molecular dynamics simulations suggested that hydrogen bond interactions between the D49 and galactosylated oligosaccharides play an important role in enzyme-XGO interactions. This was confirmed by site-directed mutagenesis, where the D49A mutant affected catalytic efficiency against galactosylated XGOs. Our findings advance xyloglucan disassembly models and highlight the importance of YicI for biotechnology applications.


Subject(s)
Escherichia coli , Tandem Mass Spectrometry , Escherichia coli/genetics , Glucans , Hydrolysis , Oligosaccharides/chemistry , Xylans
3.
Protein Expr Purif ; 160: 28-35, 2019 08.
Article in English | MEDLINE | ID: mdl-30940468

ABSTRACT

Nanoparticles can act as support materials for enzymatic immobilization, introducing a balance of characteristics that modulate the efficiency of biocatalysts, such as specific surface area, resistance to mass transfer and effective enzymatic loading. Magnetic nanoparticles can be easily separated using an external magnetic field, and in this work two recombinant enzymes, the ß-glucosidase from Humicola insolens (Bglhi) and the endoglucanase from Scytalidium thermophilum (Egst) were immobilized on synthetized Fe3O4 nanoparticles derivatized with chitosan/glutaraldehyde/N-(5-amino-1-carboxy-pentyl) iminodiacetic acid and functionalized with NiCl2. The immobilization yields were about 20% for Bglhi and Egst with efficiencies of 132% and 115%, respectively. The two enzymes were also co-immobilized with yield was about 49%. The optimal temperatures of the immobilized enzymes were 70 °C and 55 °C for Egst and Bglhi, respectively. Egst hydrolyzed CMC in the presence of 4 mM MnCl2 with Vmax = 625.0 ±â€¯6.7 U mg-1 and KM = 6.4 ±â€¯0.5 mg mL-1 resulting in a catalytic efficiency (kcat/KM) of 107.4 ±â€¯5.4 mg-1 s-1 mL. Bglhi hydrolyzed pNP-Glc with Vmax = 52.7 ±â€¯2.7 U mg-1 and KM = 0.23 ±â€¯0.01 mM resulting in a catalytic efficiency (kcat/KM) of 214.3 ±â€¯10.2 s-1 mM-1. The individually immobilized enzymes when combined showed a synergistic effect on the substrates tested and a very similar action when compared to the co-immobilized enzymes, suggesting excellent potential for application in biotechnological processes.


Subject(s)
Cellulase/chemistry , Fungal Proteins/chemistry , Magnetite Nanoparticles/chemistry , beta-Glucosidase/chemistry , Ascomycota/chemistry , Ascomycota/enzymology , Biocatalysis , Enzyme Stability , Enzymes, Immobilized/chemistry , Hydrogen-Ion Concentration , Kinetics , Temperature
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