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1.
Plant Physiol ; 181(3): 993-1007, 2019 11.
Article in English | MEDLINE | ID: mdl-31515448

ABSTRACT

Aging-related processes in plant tissues are associated with changes in developmental and physiological processes relevant for stress tolerance and plant performance. While senescence-regulated processes have been extensively characterized in leaves, they remain poorly described in roots. Here, we investigated the physiological processes and molecular determinants underlying the senescence of seminal roots in hydroponically grown barley (Hordeum vulgare). Transcriptome profiling in apical and basal root tissues revealed that several NAC-, WRKY-, and APETALA2 (AP2)-type transcription factors were upregulated just before the arrest of root elongation, when root cortical cell lysis and nitrate uptake, as well as cytokinin concentrations ceased. At this time point, root abscisic acid levels peaked, suggesting that abscisic acid is involved in root aging-related processes characterized by expression changes of genes involved in oxidative stress responses. This temporal sequence of aging-related processes in roots is highly reminiscent of typical organ senescence, with the exception of evidence for the retranslocation of nutrients from roots. Supported by the identification of senescence-related transcription factors, some of which are not expressed in leaves, our study indicates that roots undergo an intrinsic genetically determined senescence program, predominantly influenced by plant age.


Subject(s)
Hordeum/metabolism , Hordeum/physiology , Plant Leaves/metabolism , Plant Leaves/physiology , Plant Roots/metabolism , Plant Roots/physiology , Abscisic Acid/metabolism , Aging/physiology , Cytokinins/metabolism , Gene Expression Regulation, Plant , Hordeum/genetics , Plant Leaves/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Roots/genetics , Transcription Factors/genetics , Transcription Factors/metabolism
2.
Andrologia ; 50(3)2018 Apr.
Article in English | MEDLINE | ID: mdl-29265478

ABSTRACT

NR5A1 or steroidogenic factor 1 (SF1) is an autosomal gene, which encodes a protein that is a member of nuclear receptor family. NR5A1 regulates the transcription of numerous genes that are expressed in hypothalamic-pituitary-gonadal axis and adrenal cortex which in turn, coordinate the gonadal development, steroidogenesis and sex differentiation. Several mutations in NR5A1 have been reported to cause gonadal dysgenesis with adrenal insufficiency in individuals with 46,XY karyotype. However, studies in the past few years have shown that NR5A1 mutations can also contribute to primary ovarian insufficiency and impaired spermatogenesis. As there is no genetic study on NR5A1 in Indian infertile men, we have sequenced the entire coding region (exons 2-7) of NR5A1 in 502 infertile men of which, 414 were non-obstructive azoospermic and 88 severe oligozoospermic, along with 427 ethnically matched fertile controls. Interestingly, none of the mutations reported to be associated with male infertility were found in our study, except one polymorphism, rs1110061. However, it was not significantly different between infertile and fertile groups (p = .76). In addition, we have identified six intronic variants; but none of them was significantly associated with male infertility.


Subject(s)
Genetic Predisposition to Disease , Infertility, Male/genetics , Mutation , Polymorphism, Single Nucleotide , Steroidogenic Factor 1/genetics , Adult , Alleles , Exons , Gene Frequency , Genetic Association Studies , Humans , Male
3.
Reprod Biomed Online ; 11(4): 444-8, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16274605

ABSTRACT

The present study was aimed at mutational screening of the gene coding for galactose-1-phosphate uridyltransferase in females with premature ovarian failure within an Indian population. A case-control-based study approach was used. It included females with premature ovarian failure (n = 108), primary amenorrhoea (n = 37) and secondary amenorrhoea (n = 9), and a control group of 136 women with a normal ovarian pattern. Gene sequencing analysis for the presence of mutations in the promoter and the coding regions of GALT has shown the absence of any mutation. A hexanucleotide deletion was found in the third intronic region of GALT in both cases and controls. These data support the hypothesis that there is no significant association between GALT mutations and ovarian failure, and hence the present authors conclude that there is no relationship between ovarian failure and GALT polymorphisms in Indian women.


Subject(s)
Gene Expression Regulation , Genetic Predisposition to Disease , Primary Ovarian Insufficiency/genetics , UTP-Hexose-1-Phosphate Uridylyltransferase/genetics , Adult , Age Factors , Amenorrhea/genetics , Base Sequence , Case-Control Studies , DNA/chemistry , DNA Mutational Analysis , DNA Primers/chemistry , Female , Gene Deletion , Genotype , Humans , India , Introns , Molecular Sequence Data , Mutation , Polymerase Chain Reaction , Polymorphism, Genetic , Promoter Regions, Genetic , Sequence Analysis, DNA , Temperature
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