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1.
Neuroinformatics ; 14(3): 253-64, 2016 07.
Article in English | MEDLINE | ID: mdl-27066973

ABSTRACT

This paper provides an overview of CATI, a platform dedicated to multicenter neuroimaging. Initiated by the French Alzheimer's plan (2008-2012), CATI is a research project called on to provide service to other projects like an industrial partner. Its core mission is to support the neuroimaging of large populations, providing concrete solutions to the increasing complexity involved in such projects by bringing together a service infrastructure, the know-how of its expert academic teams and a large-scale, harmonized network of imaging facilities. CATI aims to make data sharing across studies easier and promotes sharing as much as possible. In the last 4 years, CATI has assisted the clinical community by taking charge of 35 projects so far and has emerged as a recognized actor at the national and international levels.


Subject(s)
Computational Biology/methods , Data Mining , Neuroimaging/methods , Humans , Information Dissemination , Multicenter Studies as Topic , Workflow
2.
Arterioscler Thromb Vasc Biol ; 31(1): 151-9, 2011 Jan.
Article in English | MEDLINE | ID: mdl-20947821

ABSTRACT

OBJECTIVE: To characterize the role of a vascular-expressed class 3 semaphorin (semaphorin 3G [Sema3G]). METHODS AND RESULTS: Semaphorins have been identified as axon guidance molecules. Yet, they have more recently also been characterized as attractive and repulsive regulators of angiogenesis. Through a transcriptomic screen, we identified Sema3G as a molecule of angiogenic endothelial cells. Sema3G-deficient mice are viable and exhibit no overt vascular phenotype. Yet, LacZ expression in the Sema3G locus revealed intense arterial vascular staining in the angiogenic vasculature, starting at E9.5, which was detectable throughout adolescence and downregulated in adult vasculature. Sema3G is expressed as a full-length 100-kDa secreted molecule that is processed by furin proteases to yield 95- and a 65-kDa Sema domain-containing subunits. Full-length Sema3G binds to NP2, whereas processed Sema3G binds to NP1 and NP2. Expression profiling and cellular experiments identified autocrine effects of Sema3G on endothelial cells and paracrine effects on smooth muscle cells. CONCLUSIONS: Although the mouse knockout phenotype suggests compensatory mechanisms, the experiments identify Sema3G as a primarily endothelial cell-expressed class 3 semaphorin that controls endothelial and smooth muscle cell functions in autocrine and paracrine manners, respectively.


Subject(s)
Endothelial Cells/metabolism , Endothelium, Vascular/metabolism , Gene Expression Profiling , Semaphorins/metabolism , Animals , Autocrine Communication , C-Reactive Protein/metabolism , Cells, Cultured , Coculture Techniques , Endothelium, Vascular/embryology , Gene Expression Profiling/methods , Gene Expression Regulation, Developmental , Genotype , Humans , Mice , Mice, 129 Strain , Mice, Inbred C57BL , Mice, Knockout , Muscle, Smooth, Vascular/embryology , Muscle, Smooth, Vascular/metabolism , Myocytes, Smooth Muscle/metabolism , Neovascularization, Physiologic , Nerve Tissue Proteins/metabolism , Oligonucleotide Array Sequence Analysis , Paracrine Communication , Phenotype , Protein Binding , Protein Processing, Post-Translational , RNA Interference , Recombinant Proteins/metabolism , Semaphorins/deficiency , Semaphorins/genetics , Transfection , Zebrafish/genetics , Zebrafish/metabolism , Zebrafish Proteins/genetics , Zebrafish Proteins/metabolism
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