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1.
Analyst ; 146(22): 6935-6943, 2021 Nov 08.
Article in English | MEDLINE | ID: mdl-34647547

ABSTRACT

A common strategy to improve the sensitivity of a biosensor for the detection of a low abundance analyte is to preconcentrate the analyte molecules before detection. A dual-functional gold-iron oxide core-satellite hybrid nanoparticle structure is proposed in this work to overcome the drawbacks of traditional sample pretreatment methods and the methods using non-magnetic nanomaterials for sample pretreatment. The new dual-functional hybrid nanoparticle structure can simultaneously serve as a signal reporter of a biorecognition event and a preconcentrator of a target at an extremely low concentration in a nanoplasmonic biosensor. By utilizing a fiber optic nanogold-linked sorbent assay in the fiber optic particle plasmon resonance (FOPPR) biosensor and an arbitrary DNA sequence as a target, we have demonstrated that the use of the new hybrid nanoparticle structure with magnetic preconcentration improves the limit of detection (LOD) for the DNA by 18 times as compared to the same method without magnetic preconcentration, so that the LOD for detecting the DNA can be as low as 2.6 fM. The new hybrid nanoparticle structure is easy to prepare and its use in the high-sensitivity and low-cost FOPPR biosensor provides vast opportunities in point-of-care applications.


Subject(s)
Biosensing Techniques , Metal Nanoparticles , Ferric Compounds , Gold , Limit of Detection , Surface Plasmon Resonance
2.
PLoS One ; 10(11): e0143008, 2015.
Article in English | MEDLINE | ID: mdl-26576058

ABSTRACT

The vital parameter data for 62 stocks, covering 38 species, collected from the literature, including parameters of age, growth, and reproduction, were log-transformed and analyzed using multivariate analyses. Three groups were identified and empirical equations were developed for each to describe the relationships between the predicted finite rates of population increase (λ') and the vital parameters, maximum age (Tmax), age at maturity (Tm), annual fecundity (f/Rc)), size at birth (Lb), size at maturity (Lm), and asymptotic length (L∞). Group (1) included species with slow growth rates (0.034 yr(-1) < k < 0.103 yr(-1)) and extended longevity (26 yr < Tmax < 81 yr), e.g., shortfin mako Isurus oxyrinchus, dusky shark Carcharhinus obscurus, etc.; Group (2) included species with fast growth rates (0.103 yr(-1) < k < 0.358 yr(-1)) and short longevity (9 yr < Tmax < 26 yr), e.g., starspotted smoothhound Mustelus manazo, gray smoothhound M. californicus, etc.; Group (3) included late maturing species (Lm/L∞ ≧ 0.75) with moderate longevity (Tmax < 29 yr), e.g., pelagic thresher Alopias pelagicus, sevengill shark Notorynchus cepedianus. The empirical equation for all data pooled was also developed. The λ' values estimated by these empirical equations showed good agreement with those calculated using conventional demographic analysis. The predictability was further validated by an independent data set of three species. The empirical equations developed in this study not only reduce the uncertainties in estimation but also account for the difference in life history among groups. This method therefore provides an efficient and effective approach to the implementation of precautionary shark management measures.


Subject(s)
Sharks/growth & development , Aging/physiology , Animals , Cluster Analysis , Multivariate Analysis , Phylogeny , Population Dynamics , Regression Analysis , Species Specificity
3.
Fish Oceanogr ; 24(6): 508-520, 2015 11.
Article in English | MEDLINE | ID: mdl-27667909

ABSTRACT

To analyze the effects of mesoscale eddies, sea surface temperature (SST), and gear configuration on the catch of Atlantic bluefin (Thunnus thynnus), yellowfin (Thunnus albacares), and bigeye tuna (Thunnus obesus) and swordfish (Xiphias gladius) in the U.S. northwest Atlantic longline fishery, we constructed multivariate statistical models relating these variables to the catch of the four species in 62 121 longline hauls made between 1993 and 2005. During the same 13-year period, 103 anticyclonic eddies and 269 cyclonic eddies were detected by our algorithm in the region 30-55°N, 30-80°W. Our results show that tuna and swordfish catches were associated with different eddy structures. Bluefin tuna catch was highest in anticyclonic eddies whereas yellowfin and bigeye tuna catches were highest in cyclonic eddies. Swordfish catch was found preferentially in regions outside of eddies. Our study confirms that the common practice of targeting tuna with day sets and swordfish with night sets is effective. In addition, bluefin tuna and swordfish catches responded to most of the variables we tested in the opposite directions. Bluefin tuna catch was negatively correlated with longitude and the number of light sticks used whereas swordfish catch was positively correlated with these two variables. We argue that overfishing of bluefin tuna can be alleviated and that swordfish can be targeted more efficiently by avoiding fishing in anticyclonic eddies and in near-shore waters and using more light sticks and fishing at night in our study area, although further studies are needed to propose a solid oceanography-based management plan for catch selection.

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