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1.
Methods Mol Biol ; 621: 185-202, 2010.
Article in English | MEDLINE | ID: mdl-20405368

ABSTRACT

The physical nature of a cell's microenvironment--including the elasticity of the surrounding tissue--appears to exert a significant influence on cell morphology, cytoskeleton, and gene expression. We have previously shown that committed muscle cells will develop sarcomeric striations of skeletal muscle myosin II only when the cells are grown on a compliant gel that closely matches the passive compliance of skeletal muscle. We have more recently shown with the same types of elastic gels that mesenchymal stem cells (MSCs) maximally express myogenic genes, even in the absence of tailored soluble factors. Here, we provide detailed methods not only for how we make and nanomechanically characterize hydrogels of muscle-like elasticity, but also how we culture MSCs and characterize their myogenic induction by whole human genome transcript analysis.


Subject(s)
Cell Culture Techniques/methods , Collagen/metabolism , Elasticity , Muscle Development , Muscles/cytology , Muscles/physiology , Stem Cells/cytology , Acrylic Resins , Animals , Biomarkers/metabolism , Elastic Modulus , Fluorescent Antibody Technique , Gels , Glass , Humans , Mesenchymal Stem Cells/metabolism , Microscopy, Atomic Force , Muscles/metabolism , Oligonucleotide Array Sequence Analysis , Proteins/metabolism , RNA, Messenger/genetics , RNA, Messenger/isolation & purification , RNA, Messenger/metabolism , Stem Cells/metabolism
2.
J Mol Biol ; 352(1): 58-71, 2005 Sep 09.
Article in English | MEDLINE | ID: mdl-16081096

ABSTRACT

In mammalian fast skeletal muscle, constitutive and alternative splicing from a single troponin T (TnT) gene produce multiple developmentally regulated and tissue specific TnT isoforms. Two exons, alpha (exon 16) and beta (exon 17), located near the 3' end of the gene and coding for two different 14 amino acid residue peptides are spliced in a mutually exclusive manner giving rise to the adult TnTalpha and the fetal TnTbeta isoforms. In addition, an acidic peptide coded by a fetal (f) exon located between exons 8 and 9 near the 5' end of the gene, is specifically present in TnTbeta and absent in the adult isoforms. To define the functional role of the f and alpha/beta exons, we constructed combinations of TnT cDNAs from a single human fetal fast skeletal TnTbeta cDNA clone in order to circumvent the problem of N-terminal sequence heterogeneity present in wild-type TnT isoforms, irrespective of the stage of development. Nucleotide sequences of these constructs, viz. TnTalpha, TnTalpha + f, TnTbeta - f and TnTbeta are identical, except for the presence or absence of the alpha or beta and f exons. Our results, using the recombinant TnT isoforms in different functional in vitro assays, show that the presence of the f peptide in the N-terminal T1 region of TnT, has a strong inhibitory effect on binary interactions between TnT and other thin filament proteins, TnI, TnC and Tm. The presence of the f peptide led to reduced Ca2+-dependent ATPase activity in a reconstituted thin filament, whereas the contribution of the alpha and beta peptides in the biological activity of TnT was primarily modulatory. These results indicate that the f peptide confers an inhibitory effect on the biological function of fast skeletal TnT and this can be correlated with changes in the Ca2+ regulation associated with development in fast skeletal muscle.


Subject(s)
Exons , Fetus/physiology , Muscle Fibers, Fast-Twitch/metabolism , Troponin T/genetics , Troponin T/metabolism , Adenosine Triphosphatases/metabolism , Adult , Alternative Splicing , Calcium/metabolism , Humans , Multiprotein Complexes , Muscle Fibers, Fast-Twitch/cytology , Protein Conformation , Protein Isoforms/chemistry , Protein Isoforms/genetics , Protein Isoforms/metabolism , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Troponin C/metabolism , Troponin I/metabolism , Troponin T/chemistry , Two-Hybrid System Techniques
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