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1.
Sci Adv ; 10(3): eadk5260, 2024 Jan 19.
Article in English | MEDLINE | ID: mdl-38232166

ABSTRACT

High-fidelity and comfortable recording of electrophysiological (EP) signals with on-the-fly setup is essential for health care and human-machine interfaces (HMIs). Microneedle electrodes allow direct access to the epidermis and eliminate time-consuming skin preparation. However, existing microneedle electrodes lack elasticity and reliability required for robust skin interfacing, thereby making long-term, high-quality EP sensing challenging during body movement. Here, we introduce a stretchable microneedle adhesive patch (SNAP) providing excellent skin penetrability and a robust electromechanical skin interface for prolonged and reliable EP monitoring under varying skin conditions. Results demonstrate that the SNAP can substantially reduce skin contact impedance under skin contamination and enhance wearing comfort during motion, outperforming gel and flexible microneedle electrodes. Our wireless SNAP demonstration for exoskeleton robot control shows its potential for highly reliable HMIs, even under time-dynamic skin conditions. We envision that the SNAP will open new opportunities for wearable EP sensing and its real-world applications in HMIs.


Subject(s)
Exoskeleton Device , Robotics , Humans , Adhesives , Reproducibility of Results , Skin , Electrodes
2.
Ecol Evol ; 12(6): e8929, 2022 Jul.
Article in English | MEDLINE | ID: mdl-35784034

ABSTRACT

Explaining food web dynamics, stability, and functioning depend substantially on understanding of feeding relations within a community. Bulk stable isotope ratios (SIRs) in natural abundance are well-established tools to express direct and indirect feeding relations as continuous variables across time and space. Along with bulk SIRs, the SIRs of individual amino acids (AAs) are now emerging as a promising and complementary method to characterize the flow and transformation of resources across a diversity of organisms, from microbial domains to macroscopic consumers. This significant AA-SIR capacity is based on empirical evidence that a consumer's SIR, specific to an individual AA, reflects its diet SIR coupled with a certain degree of isotopic differences between the consumer and its diet. However, many empirical ecologists are still unfamiliar with the scope of applicability and the interpretative power of AA-SIR. To fill these knowledge gaps, we here describe a comprehensive approach to both carbon and nitrogen AA-SIR assessment focusing on two key topics: pattern in AA-isotope composition across spatial and temporal scales, and a certain variability of AA-specific isotope differences between the diet and the consumer. On this basis we review the versatile applicability of AA-SIR to improve our understanding of physiological processes as well as food web functioning, allowing us to reconstruct dominant basal dietary sources and trace their trophic transfers at the specimen and community levels. Given the insightful and opportunities of AA-SIR, we suggest future applications for the dual use of carbon and nitrogen AA-SIR to study more realistic food web structures and robust consumer niches, which are often very difficult to explain in nature.

3.
Article in English | MEDLINE | ID: mdl-34682707

ABSTRACT

Spotnape ponyfish (Nuchequula nuchalis) is a dominant species that is broadly distributed from estuarine to deep-bay areas, reflecting a euryhaline habitat. Apolipoprotein AI (ApoAI) is a main component of plasma lipoproteins and has crucial roles in lipid metabolism and the defense immune system. In this study, we characterized the N. nuchalis ApoAI gene and analyzed the expression of the ApoAI transcript in N. nuchalis collected at various sites in the estuary and the deep-bay area which have different salinities. Owing to the fish's mobility, we conducted stable isotope analyses to confirm the habitat characteristics of N. nuchalis. Carbon and nitrogen isotope ratios (δ13C and δ15N) from N. nuchalis indicated different feeding sources and trophic levels in the estuarine and deep-bay habitats. The characterized N. nuchalis ApoAI displayed residual repeats that formed a pair of alpha helices, indicating that the protein belongs to the apolipoprotein family. In the phylogenetic analysis, there was no sister group of N. nuchalis ApoAI among the large clades of fish species. The transcriptional expression level of ApoAI was higher in N. nuchalis inhabiting the deep-bay area with a high salinity (over 31 psu) than in N. nuchalis inhabiting the top of the estuary with a low salinity (6~15 psu). In addition, the expression patterns of N. nuchalis ApoAI were positively correlated with environmental factors (transparency, pH, TC, and TIC) in the high salinity area. These results suggest that ApoAI gene expression can reflect habitat characteristics of N. nuchalis which traverse broad salinity ranges and is associated with functional roles of osmoregulation and lipid metabolism for fish growth and development.


Subject(s)
Estuaries , Salinity , Animals , Apolipoprotein A-I/genetics , Fishes , Phylogeny
4.
Mar Pollut Bull ; 171: 112777, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34332356

ABSTRACT

We sampled mussels (Mytilus edulis) along the coast of the Korean peninsula, and determined their trophic position (TP) using the nitrogen isotope ratio of amino acids (TPglu/phe). The TPglu/phe of mussels (2.0 to 2.5) is higher than TP of herbivores, suggesting that TP normalization is required to remove the trophic enrichment effect on basal nitrogen isotope ratio. We found similar trends in spatial variation between nitrogen isotopic baseline based on nitrogen isotope ratio of bulk tissue (δ15Nbase-bulk) and that of phenylalanine (δ15Nbase-phe) in mussels, reflecting different nitrogen sources among sampling sites. The present study suggests that δ15Nbase-bulk and δ15Nbase-phe are powerful tools to trace nitrogen isotopic baselines from primary consumers as well as higher TP organisms.


Subject(s)
Amino Acids , Nitrogen , Food Chain , Nitrogen/analysis , Nitrogen Isotopes/analysis , Oceans and Seas
5.
Article in English | MEDLINE | ID: mdl-33924310

ABSTRACT

Stable isotope analysis (SIA) and stomach content analysis (SCA) were conducted to understand ontogenetic niche shifts in silver croaker Pennahia argentata inhabiting the southern coastal waters of the Korean peninsula. Sampled P. argentata were classified into three groups based on their total length (TL; 60-80 mm TL, 80-120 mm TL, and 120-210 mm TL). Carbon isotope (δ13C) ratios were distinguishable, whereas nitrogen isotope (δ15N) ratios were not significantly different among size classes, and Standard Ellipse Area (SEA), estimated by δ13C and δ15N, was expanded with increasing TL from 0.2 ‰2 (60-80 mm TL) to 2.0 ‰2 (120-210 mm TL). SCA results showed variable contribution of dietary items to each size class. In particular, higher dietary contribution of Polychaeta to P. argentata of 80-120 mm TL than 120-210 mm TL mirrored variation in δ13C values of P. argentata in those size classes. Based on the combined analyses involving SIA and SCA, we concluded that P. argentata underwent ontogenetic niche shifts, particularly dietary shifts, with growth stages. Ontogenetic niche shifting is a representative survival strategy in fish, and, therefore, represents essential information for managing fisheries. The present study demonstrated applicability of combined SIA and SCA analyses, not only for dietary resource tracing, but also for ecological niche studies.


Subject(s)
Perciformes , Silver , Animals , Carbon Isotopes , Gastrointestinal Contents , Nitrogen Isotopes
6.
Genes (Basel) ; 11(9)2020 08 19.
Article in English | MEDLINE | ID: mdl-32825142

ABSTRACT

Environmental pollution in the aquatic environment poses a threat to the immune system of benthic organisms. The Macrophthalmus japonicus crab, which inhabits tidal flat sediments, is a marine invertebrate that provides nutrient and organic matter cycling as a means of purification. Here, we characterized the M. japonicus p38 mitogen-activated protein kinase (MAPK) gene, which plays key roles in the regulation of cellular immune and apoptosis responses. M. japonicusp38 MAPK displayed the characteristics of the conserved MAPK family with Thr-Gly-Tyr (TGY) motif and substrate-binding site Ala-Thr-Arg-Trp (ATRW). The amino acid sequence of the M. japonicus p38 MAPK showed a close phylogenetic relationship to Eriocheir sinensis MAPK14 and Scylla paramamosainp38 MAPK. The phylogenetic tree displayed two origins of p38 MAPK: crustacean and insect. The tissue distribution patterns showed the highest expression in the gills and hepatopancreas of M. japonicus crab. In addition, p38 MAPK expression in M. japonicus gills and hepatopancreas was evaluated after exposure to environmental pollutants such as perfluorooctane sulfonate (PFOS), irgarol, di(2-ethylhexyl) phthalate (DEHP), and bisphenol A (BPA). In the gills, p38 MAPK expression significantly increased after exposure to all concentrations of the chemicals on day 7. However, on day 1, there were increased p38 MAPK responses observed after PFOS and irgarol exposure, whereas decreased p38 MAPK responses were observed after DEHP and BPA exposure. The upregulation of p38 MAPK gene also significantly led to M. japonicus hepatopancreas being undertested in all environmental pollutants. The findings in this study supported that anti-stress responses against exposure to environmental pollutants were reflected in changes in expression levels in M. japonicusp38 MAPK signaling regulation as a cellular defense mechanism.


Subject(s)
Brachyura/metabolism , Environmental Pollutants/adverse effects , Gills/metabolism , Hepatopancreas/metabolism , p38 Mitogen-Activated Protein Kinases/metabolism , Animals , Brachyura/drug effects , Brachyura/genetics , Brachyura/immunology , Gills/drug effects , Gills/immunology , Hepatopancreas/drug effects , Hepatopancreas/immunology , Phylogeny , p38 Mitogen-Activated Protein Kinases/genetics , p38 Mitogen-Activated Protein Kinases/immunology
7.
Ecol Evol ; 10(14): 7250-7260, 2020 Jul.
Article in English | MEDLINE | ID: mdl-32760526

ABSTRACT

To adapt to ecological and environmental conditions, species can change their ecological niche (e.g., interactions among species) and function (e.g., prey-predation, diet competition, and habitat segregation) at the species and guild levels. Stable isotope analysis of bulk carbon and nitrogen of organisms has conventionally been used to evaluate such adaptabilities in the scenopoetic and bionomic views as the isotopic niche width.Compound-specific stable isotope analysis (CSIA) of nitrogen within amino acids provides trophic information without any disruption of scenopoetic views in the isotope ratios, unlike conventional bulk isotope analysis provides both information and therefore frequently hinders its usefulness for trophic information.We performed CSIA of amino acids to understand the trophic variability of the pike gudgeon Pseudogobio esocinus and largemouth bass Micropterus salmoides as representative specialist and generalist fish species, respectively, from 16 ecologically variable habitats in the four major rivers of Korea.There was little variation (1σ) in the trophic position (TP) among habitats for P. esocinus (± 0.2); however, there was considerably large variation for M. salmoides (± 0.6). The TP of M. salmoides was negatively correlated with the benthic invertebrate indices of the habitats, whereas the TP of P. esocinus showed no significant correlation with any indices. Thus, these two representative fish species have different trophic responses to ecological conditions, which is related to known differences in the trophic niche between specialists (i.e., small niche width) and generalists (i.e., large niche width).Over the past four decades, the conventional bulk isotope analysis has not been capable of deconvoluting "scenopoetic" and "bionomic" information. However, in the present study, we demonstrated that the CSIA of amino acids could isolate trophic niches from the traditional ecological niche composed of trophic and habitat information and evaluated how biological and ecological indices influence the trophic response of specialists and generalists.

8.
Environ Pollut ; 266(Pt 3): 115160, 2020 Nov.
Article in English | MEDLINE | ID: mdl-32682185

ABSTRACT

Trophic magnification factor (TMF) of persistent toxic substances (PTSs: Hg, PCBs, PAHs, and styrene oligomers (SOs)) in a coastal food web (12 fish and four invertebrates) was determined in Ulsan Bay, South Korea. The nitrogen stable isotope ratios (δ15N) of amino acids [δ15NGlu-Phe based on glutamic acid (δ15NGlu) and phenylalanine (δ15NPhe)] were used to estimate the trophic position (TPGlu-Phe) of organisms. The TPGlu-Phe of organisms ranged from 1.64 to 3.69, which was lower than TP estimated by δ15N of bulk particulate organic matter (TPBulk: 2.46-4.21). Mercury and CB 138, 153, 187, and 180 were biomagnified through the whole food web (TMF > 1), while other PTSs, such as PAHs and SOs were not (biodilution of SOs firstly reported). In particular, the trophic transfer of PTSs was pronounced in the resident fish (e.g., rock bream, sea perch, Korean rockfish). Of note, CB 99, 101, 118, and 183 were additionally found to be biomagnifying PTSs in these species. Thus, fish residency appears to represent an important factor in determining the TMF of PTSs in the coastal environment. Overall, δ15NGlu-Phe provided accurate TPs of organisms and could be applied to determine the trophic transfer of PTSs in coastal food webs.


Subject(s)
Food Chain , Water Pollutants, Chemical/analysis , Amino Acids , Animals , Bays , Environmental Monitoring , Fishes , Nitrogen/analysis , Nitrogen Isotopes/analysis , Republic of Korea
9.
Article in English | MEDLINE | ID: mdl-32326237

ABSTRACT

Chironomidae larvae play an important role in the food chain of river ecosystems in Korea, where it is dominant. However, detailed information on the diet of Chironomidae larvae are still lacking. The purpose of this study was to identify the gut contents of 4th instar larvae of a Chironomidae inhabiting four large-scale weirs (Sejong Weir, Juksan Weir, Gangjeong-Goryeong Weir, and Dalseong Weir) using a DNA meta-barcoding approach. We found that dominant Operational Taxonomic Unit (OUT) was assigned to Paractinolaimus sp. (Nematoda), and the sub-dominant OTU was assigned to Dicrotendipes fumidus (Chironomidae). The most common OTUs among the individuals included phytoplankton, such as Tetrahymena sp., D. armatus, Pseudopediastrum sp., Tetradesmus dimorphus, Biddulphia tridens, and Desmodesmus spp. We calculated the selectivity index (E') and provided scientific evidence that Chironomidae larvae have a significant preference (E' > 0.5) for Desmodesmus armatus, E. minima, and T. dimorphus, while it does not show preference for other species found in its gut. Differences in physico-chemical factors, such as water quality, nutrients, Chl-a, and carbon concentrations, resulting from anthropogenic impacts (i.e., construction of large-scale weirs) as well as the particle size of prey organisms (small-sized single cell) and effects of chemicals (chemokinesis) could affect the feeding behavior of Chironomidae larvae.


Subject(s)
Chironomidae , DNA Barcoding, Taxonomic , Gastrointestinal Microbiome , Animals , Chironomidae/microbiology , Ecosystem , Larva , Republic of Korea
10.
Mitochondrial DNA B Resour ; 5(3): 2310-2311, 2020 Jun 05.
Article in English | MEDLINE | ID: mdl-33457771

ABSTRACT

The complete mitochondrial genome of Stictochironomus akizukii (Tokunaga) was sequenced. The circular mitochondrial genome is 15,052 bp and consists of 13 protein-coding, 3 ribosomal RNAs, and 22 transfer RNA genes (GenBank accession no. MT185679). Results of maximum likelihood analysis showed that this species clustered with other species of the family Chironomidae. This study will contribute to the phylogenetics of genus Stictochironomus and the other genera of Chironomidae.

11.
Environ Int ; 135: 105361, 2020 02.
Article in English | MEDLINE | ID: mdl-31887478

ABSTRACT

The trophic magnification of persistent organic pollutants (POPs), which is the relationship between POP concentration and the trophic position (TPs) of an organism, is considered an important factor for prioritizing chemicals of concern in the environment. Organismal TPs are typically based on nitrogen isotope ratios of bulk tissue (δ15Nbulk). In this study, nitrogen isotope ratios of amino acids (δ15NAAs), a more precise approach for TP estimation (TPAAs), was applied and compared with estimations of TP based on δ15Nbulk (TPbulk) in marine organisms living in Masan Bay, South Korea. Compound-specific isotope analysis of the amino acids (CSIA-AAs) in fish samples allows us to calculate robust TPs by correcting the variation in baseline isotope values with use of the δ15Nbulk technique. In a benthic food chain, this approach reveals more significant magnification trends for POPs [polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers (PBDEs), and organochlorine pesticides (OCPs)] than those revealed by analysis of the relationship between TPbulk and POPs. The trophic magnification factors (TMF) associated with TPAAs were significant for some POPs, especially pp'-DDD and chlordane. The results presented in this study suggest that TP calculations based on δ15NAAs are an effective tool for characterizing trophic magnification trends related to the fates of various pollutants.


Subject(s)
Nitrogen Isotopes/chemistry , Amino Acids , Animals , Environmental Monitoring , Fishes , Food Chain , Halogenated Diphenyl Ethers , Polychlorinated Biphenyls , Republic of Korea , Water Pollutants, Chemical
12.
Environ Int ; 133(Pt B): 105194, 2019 12.
Article in English | MEDLINE | ID: mdl-31675558

ABSTRACT

To determine distributions, bioaccumulation, and trophic transfer of freshwater cyanobacterial toxins such as microcystins (MCs), surface water, suspended solids, sediments, and coastal organisms were collected from seven stations in inner and outer regions of the estuary dam in the Geum River Estuary in June and July 2017. Concentrations of MC variants (MC-LR, -RR, and -YR) in the multimedia samples were analyzed using a HPLC-MS/MS. Trophic position (TP) of organisms (fish, bivalve, gastropod, decapod, and polychaete) was determined by nitrogen stable isotope analyses of both bulk tissues and amino acids. From July to August 2017, great concentrations of MCs were detected in discharged freshwater ranging from 0.4 to 75 µg L-1. Considerable amounts of MCs are delivered to the Geum River Estuary in summer season. MCs spread far away as dissolved phases (18.7-49.5 ng L-1) in July when large amount of freshwater was discharged during the rainy season. Concentrations of MCs in marine organisms varied among species, ranging from 40 to 870 ng g-1 dw. Bioaccumulated MCs tend to decrease with increasing TP of organisms, suggesting that MCs are biodiluted through the marine food web. Compound-specific isotope analysis (nitrogen of amino acids) provides more reliable TPs compared with those by bulk isotope analysis in a closed estuary (such as the Geum River Estuary) with large fluctuations in the isotope ratio of primary producers.


Subject(s)
Geum/chemistry , Rivers/chemistry , Amino Acids/chemistry , Animals , Bioaccumulation , Environmental Monitoring , Estuaries , Fishes , Food Chain , Isotopes/analysis , Microcystins/analysis , Multimedia , Rain , Republic of Korea , Seafood , Seasons , Tandem Mass Spectrometry
13.
Environ Pollut ; 238: 677-690, 2018 Jul.
Article in English | MEDLINE | ID: mdl-29621727

ABSTRACT

During the last several decades, persistent organic pollutants and metals cause great concern for their toxicity in organisms as well as for their bioaccumulation and/or trophic transfer through the food chains in ecosystems. A large number of studies therefore have focused on the trophic levels of organisms to illustrate food web structure, as a critical component in the study of pollutant dynamics and biomagnification. The trends in biomagnification of pollutants in food webs indeed provide fundamental information about the properties and fates of pollutants in ecosystems. The trophic magnification supports the establishment of a reliable trophic structure, which can further aid the understanding of the transport and exposure routes of contaminants in accumulation and risk assessments. Recently, efforts to interpret the food web structure using carbon and nitrogen stable isotope ratios have contributed to better understanding of the fate of pollutants in the ecosystem. However, it is known that this isotope analysis of bulk ones has many weaknesses, particularly for uncertainties on the estimate of trophic levels and therefore of magnification factors for studied organisms, enough to support a regulatory interpretation. In this review, we collate studies that investigated biomagnification characteristics of pollutants in aquatic ecosystems, along with calculated trophic magnification factors. Moreover, we introduce a novel approach, compound-specific stable isotope analysis of nitrogen in amino acids, to establish reliable food web structures and accurate trophic levels for biomagnification studies. This method promises to provide sound results for interpreting the influence of the pollutant in organisms, along with their bioaccumulation and magnification characteristics, as well as that in ecosystem.


Subject(s)
Amino Acids/analysis , Ecosystem , Environmental Monitoring/methods , Food Chain , Animals , Fishes/metabolism , Metals/analysis , Nitrogen Isotopes/analysis , Water Pollutants, Chemical/analysis
14.
Chemosphere ; 177: 109-119, 2017 Jun.
Article in English | MEDLINE | ID: mdl-28284959

ABSTRACT

Coastal areas are subjected to significant allochthonous organic matter deposits from surrounding areas; however, limited information is available on the source and delivery of this organic matter. In this study, to assess seasonal changes in the sources of organic matter in Lake Sihwa (Korea), biodegradability, fluorescence property, and stable isotopic compositions (carbon, nitrogen, and sulfur) of the organic matter were determined. Water samples were collected from the inner lake (n = 9) and inland creeks (n = 10) in five separate events, from November 2012 to October 2013. Organic matter originating from rural, urban, and industrial areas was examined as the potential sources. The organic matter contents and biodegradability in the industrial area were the highest, whereas low concentrations and poor biodegradability of organic matter were found in the rural area, and moderate properties were observed in the urban area. In Lake Sihwa, a large concentration of total organic matter and enhanced biodegradability were observed during March and August. However, main source of organic matter differed between the sampling events. The largest contribution of organic matter, deriving from marine phytoplankton, was found in March. On the other hand, in August, the organic matter originating from the industrial area, which is characterized by high levels of heavy metals and persistent organic pollutants, was significantly increased. Our results could be useful to enhance the management of water bodies aimed at reducing the organic matter concentrations and improving the water quality of Lake Sihwa, and even that of the Yellow Sea.


Subject(s)
Carbon Isotopes/analysis , Environmental Monitoring/methods , Lakes/chemistry , Nitrogen Isotopes/analysis , Seasons , Sulfur/analysis , Water Pollutants, Chemical/analysis , Biodegradation, Environmental , Phytoplankton/chemistry , Republic of Korea , Water Quality
15.
Chemosphere ; 168: 1389-1399, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27919532

ABSTRACT

We investigated molecular distributions and stable carbon isotopic compositions (δ13C) of sedimentary n-alkanes (C15C35) in the riverbank and marine surface sediments to trace natural and anthropogenic organic carbon (OC) sources in the eastern Yellow Sea which is a river dominated marginal sea. Molecular distributions of n-alkanes are overall dominated by odd-carbon-numbered high molecular weight n-C27, n-C29, and n-C31. The δ13C signatures of n-C27, n-C29, and n-C31 indicate a large contribution of C3 gymnosperms as the main source of n-alkanes, with the values of -29.5 ± 1.3‰, -30.3 ± 2.0‰, and -30.0 ± 1.7‰, respectively. However, the contribution of thermally matured petroleum-derived OC to the sedimentary OC pool is also evident, especially in the southern part of the study area as shown by the low carbon preference index (CPI25-33, <1) and natural n-alkanes ratio (NAR, <-0.6) values. Notably, the even-carbon-numbered long-chain n-C28 and n-C30 in this area have higher δ13C values (-26.2 ± 1.5‰ and -26.5 ± 1.9‰, respectively) than the odd-carbon-numbered long-chain n-C29 and n-C31 (-28.4 ± 2.7‰ and -28.4 ± 2.4‰, respectively), confirming two different sources of long-chain n-alkanes. Hence, our results highlight a possible influence of petroleum-induced OC on benthic food webs in this ecosystem. However, the relative proportions of the natural and petroleum-derived OC sources are not calculated due to the lack of biogeochemical end-member data in the study area. Hence, more works are needed to constrain the end-member values of the organic material supplied from the rivers to the eastern Yellow Sea and thus to better understand the source and depositional process of sedimentary OC in the eastern Yellow Sea.


Subject(s)
Carbon Isotopes/analysis , Geologic Sediments/analysis , Petroleum , Alkanes/analysis , Environmental Monitoring/methods , Pacific Ocean , Rivers
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