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1.
Plant Physiol ; 194(2): 805-818, 2024 Jan 31.
Article in English | MEDLINE | ID: mdl-37819034

ABSTRACT

Plastid-encoded RNA polymerase (PEP) plays a pivotal role in chloroplast development by governing the transcription of chloroplast genes, and PEP-associated proteins (PAPs) modulate PEP transcriptional activity. Therefore, PAPs provide an intriguing target for those efforts to improve yield, by enhancing chloroplast development. In this study, we identified the rice (Oryza sativa) OsPAP3 gene and characterized its function in chloroplast development. OsPAP3 expression was light-dependent and leaf-specific, similar to the PEP-dependent chloroplast gene RUBISCO LARGE SUBUNIT (OsRbcL), and OsPAP3 protein localized to chloroplast nucleoids where PEP functions. Analysis of loss-of-function and gain-of-function mutants showed that the expression of OsPAP3 is tightly linked to chloroplast gene expression and chloroplast biogenesis in rice. Homozygous knockout mutants of OsPAP3 had fewer chloroplasts than wild type, whereas plants overexpressing OsPAP3 had more chloroplasts. Also, OsPAP3 knockout suppressed the PEP-dependent expression of chloroplast genes, but OsPAP3 overexpression increased their expression. These findings indicate that OsPAP3 regulates chloroplast biogenesis in rice by controlling the PEP-dependent expression of chloroplast genes. More importantly, data from 3 seasons of field cultivation revealed that the overexpression of OsPAP3 improves rice grain yield by approximately 25%, largely due to increased tiller formation. Collectively, these observations suggest that OsPAP3 regulates rice growth and productivity by promoting chloroplast development.


Subject(s)
Arabidopsis Proteins , Oryza , Oryza/genetics , Oryza/metabolism , Chloroplasts/metabolism , Plastids/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Arabidopsis Proteins/metabolism , Gene Expression Regulation, Plant
2.
Plant Physiol ; 187(3): 1577-1586, 2021 11 03.
Article in English | MEDLINE | ID: mdl-34618030

ABSTRACT

The root endodermis forms a selective barrier that prevents the free diffusion of solutes into the vasculature; to make this barrier, endodermal cells deposit hydrophobic compounds in their cell walls, forming the Casparian strip. Here, we showed that, in contrast to vascular and epidermal root cells, endodermal root cells do not divide alongside the root apical meristem in Arabidopsis thaliana. Auxin treatment induced division of endodermal cells in wild-type plants, but not in the auxin signaling mutant auxin resistant3-1. Endodermis-specific activation of auxin responses by expression of truncated AUXIN-RESPONSIVE FACTOR5 (ΔARF5) in root endodermal cells under the control of the ENDODERMIS7 promoter (EN7::ΔARF5) also induced endodermal cell division. We used an auxin transport inhibitor to cause accumulation of auxin in endodermal cells, which induced endodermal cell division. In addition, knockout of P-GLYCOPROTEIN1 (PGP1) and PGP19, which mediate centripetal auxin flow, promoted the division of endodermal cells. Together, these findings reveal a tight link between the endodermal auxin response and endodermal cell division, suggesting that auxin is a key regulator controlling the division of root endodermal cells, and that PGP1 and PGP19 are involved in regulating endodermal cell division.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis/growth & development , Cell Division , Indoleacetic Acids/pharmacology , Plant Growth Regulators/pharmacology , Plant Roots/growth & development , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Cell Division/genetics , Plant Cells/physiology , Plant Roots/genetics , Plant Roots/metabolism
3.
Int J Mol Sci ; 21(5)2020 Mar 06.
Article in English | MEDLINE | ID: mdl-32155710

ABSTRACT

Roots anchor plants and take up water and nutrients from the soil; therefore, root development strongly affects plant growth and productivity. Moreover, increasing evidence indicates that root development is deeply involved in plant tolerance to abiotic stresses such as drought and salinity. These findings suggest that modulating root growth and development provides a potentially useful approach to improve plant abiotic stress tolerance. Such targeted approaches may avoid the yield penalties that result from growth-defense trade-offs produced by global induction of defenses against abiotic stresses. This review summarizes the developmental mechanisms underlying root development and discusses recent studies about modulation of root growth and stress tolerance in rice.


Subject(s)
Oryza/growth & development , Oryza/metabolism , Plant Proteins/metabolism , Plant Roots/metabolism , Salt Tolerance/genetics , Water/metabolism , Oryza/genetics , Plant Proteins/genetics , Plant Roots/genetics
4.
Int J Mol Sci ; 21(1)2020 Jan 02.
Article in English | MEDLINE | ID: mdl-31906415

ABSTRACT

To date, extensive studies have identified many classes of hormones in plants and revealed the specific, nonredundant signaling pathways for each hormone. However, plant hormone functions largely overlap in many aspects of plant development and environmental responses, suggesting that studying the crosstalk among plant hormones is key to understanding hormonal responses in plants. The phytohormone jasmonic acid (JA) is deeply involved in the regulation of plant responses to biotic and abiotic stresses. In addition, a growing number of studies suggest that JA plays an essential role in the modulation of plant growth and development under stress conditions, and crosstalk between JA and other phytohormones involved in growth and development, such as gibberellic acid (GA), cytokinin, and auxin modulate various developmental processes. This review summarizes recent findings of JA crosstalk in the modulation of plant growth and development, focusing on JA-GA, JA-cytokinin, and JA-auxin crosstalk. The molecular mechanisms underlying this crosstalk are also discussed.


Subject(s)
Cyclopentanes/metabolism , Oxylipins/metabolism , Plant Development/genetics , Plant Growth Regulators/metabolism , Plants/metabolism , Signal Transduction/genetics , Cytokinins/genetics , Cytokinins/metabolism , Gene Expression Regulation, Plant/genetics , Gibberellins/metabolism , Indoleacetic Acids/metabolism , Plant Development/physiology , Plants/enzymology , Plants/genetics , Signal Transduction/physiology , Stress, Physiological
5.
Plant Signal Behav ; 14(9): 1637664, 2019.
Article in English | MEDLINE | ID: mdl-31264505

ABSTRACT

Jasmonic acid (JA) modulates plant development, growth, and responses to stress. Previously, we showed that in Arabidopsis thaliana, JA promotes the formation of extra xylem in roots, and mutant plants unable to express PIN-FORMED 3 (PIN3) and PIN7 formed extra xylem in the absence of exogenous JA. Those results suggested that JA modulates root xylem development by controlling PIN-mediated polar auxin transport. Consistent with this, treatment with an auxin transport inhibitor induced extra xylem formation. Here, we characterized the expression of PIN3 and PIN7 in JA-treated Arabidopsis plants. PIN3 expression was not altered in response to JA; by contrast, PIN7 expression was reduced by JA, which suggested that PIN7 is involved in JA-mediated xylem development. Indeed, overexpressing PIN7 suppressed the formation of extra xylem in response to JA. Based on these results, we propose that JA mediates xylem development by controlling polar auxin transport with PIN7 critically involved in this process.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis/genetics , Cyclopentanes/metabolism , Gene Expression Regulation, Plant , Oxylipins/metabolism , Xylem/growth & development , Arabidopsis Proteins/metabolism , Mutation/genetics , Phenotype , Suppression, Genetic , Xylem/cytology , Xylem/genetics
6.
Plant Biotechnol J ; 17(1): 118-131, 2019 01.
Article in English | MEDLINE | ID: mdl-29781573

ABSTRACT

Drought stress seriously impacts on plant development and productivity. Improvement of drought tolerance without yield penalty is a great challenge in crop biotechnology. Here, we report that the rice (Oryza sativa) homeodomain-leucine zipper transcription factor gene, OsTF1L (Oryza sativa transcription factor 1-like), is a key regulator of drought tolerance mechanisms. Overexpression of the OsTF1L in rice significantly increased drought tolerance at the vegetative stages of growth and promoted both effective photosynthesis and a reduction in the water loss rate under drought conditions. Importantly, the OsTF1L overexpressing plants showed a higher drought tolerance at the reproductive stage of growth with a higher grain yield than nontransgenic controls under field-drought conditions. Genomewide analysis of OsTF1L overexpression plants revealed up-regulation of drought-inducible, stomatal movement and lignin biosynthetic genes. Overexpression of OsTF1L promoted accumulation of lignin in shoots, whereas the RNAi lines showed opposite patterns of lignin accumulation. OsTF1L is mainly expressed in outer cell layers including the epidermis, and the vasculature of the shoots, which coincides with areas of lignification. In addition, OsTF1L overexpression enhances stomatal closure under drought conditions resulted in drought tolerance. More importantly, OsTF1L directly bound to the promoters of lignin biosynthesis and drought-related genes involving poxN/PRX38, Nodulin protein, DHHC4, CASPL5B1 and AAA-type ATPase. Collectively, our results provide a new insight into the role of OsTF1L in enhancing drought tolerance through lignin biosynthesis and stomatal closure in rice.


Subject(s)
Genes, Plant/genetics , Lignin/biosynthesis , Oryza/genetics , Plant Stomata/physiology , Transcription Factors/genetics , Dehydration , Gene Expression Regulation, Plant , Genes, Plant/physiology , Oryza/metabolism , Oryza/physiology , Phylogeny , Transcription Factors/physiology
7.
Plant Signal Behav ; 13(3): e1451707, 2018 03 04.
Article in English | MEDLINE | ID: mdl-29533132

ABSTRACT

Drought stress provokes jasmonic acid (JA) signaling, which mediates plant stress responses; moreover, growing numbers of studies suggest that JA is involved in the modulation of root development under drought stress. Recently, we showed that JA promotes differentiation of xylem from procambial cells in Arabidopsis roots. Further molecular and genetic approaches revealed that the effect of JA on xylem development is caused by suppression of cytokinin responses, suggesting that JA antagonistically interacts with cytokinin to modulate xylem development. Here, we showed that, similar to JA, drought stress promotes xylem development. This suggests that the antagonistic interaction between JA and cytokinin is involved in drought-mediated xylem development, a hypothesis supported by the observation that drought stress increases JA responses and decreases cytokinin responses. Based on these findings, we propose that drought stress promotes xylem development, and the antagonistic interaction between JA and cytokinin is deeply involved in this process.


Subject(s)
Cell Differentiation , Cyclopentanes/metabolism , Cytokinins/metabolism , Droughts , Oxylipins/metabolism , Stress, Physiological , Xylem/cytology , Xylem/metabolism , Cell Differentiation/drug effects , Plant Roots/drug effects , Plant Roots/growth & development , Polyethylene Glycols/pharmacology , Stress, Physiological/drug effects , Xylem/drug effects , Xylem/growth & development
8.
Front Plant Sci ; 9: 310, 2018.
Article in English | MEDLINE | ID: mdl-29593766

ABSTRACT

Plants have evolved to have sophisticated adaptation mechanisms to cope with drought stress by reprograming transcriptional networks through drought responsive transcription factors. NAM, ATAF1-2, and CUC2 (NAC) transcription factors are known to be associated with various developmental processes and stress tolerance. In this study, we functionally characterized the rice drought responsive transcription factor OsNAC14. OsNAC14 was predominantly expressed at meiosis stage but is induced by drought, high salinity, ABA, and low temperature in leaves. Overexpression of OsNAC14 resulted in drought tolerance at the vegetative stage of growth. Field drought tests demonstrated that OsNAC14 overexpressing transgenic rice lines exhibited higher number of panicle and filling rate compared to non-transgenic plants under drought conditions. RNA-sequencing analysis revealed that OsNAC14 overexpression elevated the expression of genes for stress response, DNA damage repair, defense related, and strigolactone biosynthesis. In addition, chromatin immunoprecipitation analysis confirmed the direct interaction of OsNAC14 with the promoter of OsRAD51A1, a key component in homologous recombination in DNA repair system. Collectively, these results indicate that OsNAC14 mediates drought tolerance by recruiting factors involved in DNA damage repair and defense response resulting in improved tolerance to drought.

9.
BMC Genomics ; 19(1): 40, 2018 01 12.
Article in English | MEDLINE | ID: mdl-29329517

ABSTRACT

BACKGROUND: Plant stress responses and mechanisms determining tolerance are controlled by diverse sets of genes. Transcription factors (TFs) have been implicated in conferring drought tolerance under drought stress conditions, and the identification of their target genes can elucidate molecular regulatory networks that orchestrate tolerance mechanisms. RESULTS: We generated transgenic rice plants overexpressing the 4 rice TFs, OsNAC5, 6, 9, and 10, under the control of the root-specific RCc3 promoter. We showed that they were tolerant to drought stress with reduced loss of grain yield under drought conditions compared with wild type plants. To understand the molecular mechanisms underlying this tolerance, we here performed chromatin immunoprecipitation (ChIP)-Seq and RNA-Seq analyses to identify the direct target genes of the OsNAC proteins using the RCc3:6MYC-OsNAC expressing roots. A total of 475 binding loci for the 4 OsNAC proteins were identified by cross-referencing their binding to promoter regions and the expression levels of the corresponding genes. The binding loci were distributed among the promoter regions of 391 target genes that were directly up-regulated by one of the OsNAC proteins in four RCc3:6MYC-OsNAC transgenic lines. Based on gene ontology (GO) analysis, the direct target genes were related to transmembrane/transporter activity, vesicle, plant hormones, carbohydrate metabolism, and TFs. The direct targets of each OsNAC range from 4.0-8.7% of the total number of up-regulated genes found in the RNA-Seq data sets. Thus, each OsNAC up-regulates a set of direct target genes that alter root system architecture in the RCc3:OsNAC plants to confer drought tolerance. Our results provide a valuable resource for functional dissection of the molecular mechanisms of drought tolerance. CONCLUSIONS: Many of the target genes, including transmembrane/transporter, vesicle related, auxin/hormone related, carbohydrate metabolic processes, and transcription factor genes, that are up-regulated by OsNACs act as the cellular components which would alter the root architectures of RCc3:OsNACs for drought tolerance.


Subject(s)
Droughts , Gene Expression Regulation, Plant , Genome-Wide Association Study/methods , Oryza/genetics , Plant Proteins/metabolism , Plants, Genetically Modified/genetics , Transcription Factors/metabolism , Chromatin Immunoprecipitation/methods , Oryza/growth & development , Oryza/metabolism , Plant Proteins/genetics , Plants, Genetically Modified/growth & development , Plants, Genetically Modified/metabolism , Protein Domains , Sequence Analysis, RNA/methods , Stress, Physiological , Transcription Factors/genetics
10.
Front Plant Sci ; 9: 1866, 2018.
Article in English | MEDLINE | ID: mdl-30619427

ABSTRACT

The jasmonic acid (JA) and gibberellic acid (GA) signaling pathways interact to coordinate stress responses and developmental processes. This coordination affects plant growth and yield, and is mediated by interactions between the repressors of each pathway, the JASMONATE ZIM-DOMAIN PROTEIN (JAZ) and DELLA proteins. In this study we attempted to identify rice (Oryza sativa) JAZs that interact with rice DELLAs such as SLENDER RICE 1 (SLR1). Analysis of protein-protein interactions showed that OsJAZ8 and OsJAZ9 interact with SLR1; OsJAZ9 also interacted with the SLR1-LIKE (SLRL) protein SLRL2. Based on this broader interaction, we explored the function of OsJAZ9 in JA and GA responses by analyzing transcript levels of the JA-responsive gene OsbHLH148 and the GA-responsive gene OsPIL14 in OsJAZ9-overexpressing (OsJAZ9-Ox) and osjaz9 mutant plants. OsbHLH148 and OsPIL14 encode key transcription factors controlling JA and GA responses, respectively, and JA and GA antagonistically regulate their expression. In OsJAZ9-Ox, the expression of OsbHLH148 was downregulated and the expression of OsPIL14 was upregulated. By contrast, in osjaz9 mutants, the expression of OsbHLH148 was upregulated and the expression of OsPIL14 was downregulated. These observations indicated that OsJAZ9 regulates both JA and GA responses in rice, and this finding was supported by the opposite expression patterns of OsDREB1s, downstream targets of OsbHLH148 and OsPIL14, in the OsJAZ9-Ox and osjaz9 plants. Together, these findings indicate that OsJAZ9 suppresses JA responses and promotes GA responses in rice, and the protein-protein interaction between OsJAZ9 and SLR1 is involved in the antagonistic interplay between JA and GA.

11.
Sci Rep ; 7(1): 10212, 2017 08 31.
Article in English | MEDLINE | ID: mdl-28860478

ABSTRACT

Developmental flexibility under stress conditions largely relies on the interactions between hormones that mediate stress responses and developmental processes. In this study, we showed that the stress hormone jasmonic acid (JA) induces formation of extra xylem in the roots of wild-type Arabidopsis thaliana (Col-0). JA signaling mutants such as coronatine insensitive1-1 and jasmonate resistant1-1 did not form extra xylem in response to JA, but the JA biosynthesis mutant oxophytodienoate-reductase3 did form extra xylem. These observations suggested that the JA response promotes xylem development. To understand the mechanism, we examined the regulatory interaction between JA and cytokinin, a negative regulator of xylem development. JA treatment reduced cytokinin responses in the vasculature, and exogenous cytokinin nullified the effect of JA on formation of extra xylem. A time-course experiment showed that suppression of cytokinin responses by JA does not occur rapidly, but the JA-mediated xylem phenotype is tightly linked to the suppression of the cytokinin response. Further analysis of arabidopsis histidine phosphotransfer protein6-1 and myc2-3 mutants revealed that the JA-responsive transcription factor MYC2 regulates the expression of AHP6 in response to JA and expression of AHP6 is involved in the JA-mediated xylem phenotype.


Subject(s)
Arabidopsis/cytology , Cyclopentanes/pharmacology , Cytokinins/pharmacology , Oxylipins/pharmacology , Xylem/growth & development , Arabidopsis/drug effects , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Basic Helix-Loop-Helix Leucine Zipper Transcription Factors/genetics , Drug Antagonism , Gene Expression Regulation, Developmental/drug effects , Gene Expression Regulation, Plant/drug effects , Mutation , Phenotype , Plant Roots/cytology , Plant Roots/drug effects , Plant Roots/genetics , Stress, Physiological , Xylem/drug effects
12.
Plant Biotechnol J ; 15(6): 754-764, 2017 Jun.
Article in English | MEDLINE | ID: mdl-27892643

ABSTRACT

Drought has a serious impact on agriculture worldwide. A plant's ability to adapt to rhizosphere drought stress requires reprogramming of root growth and development. Although physiological studies have documented the root adaption for tolerance to the drought stress, underlying molecular mechanisms is still incomplete, which is essential for crop engineering. Here, we identified OsNAC6-mediated root structural adaptations, including increased root number and root diameter, which enhanced drought tolerance. Multiyear drought field tests demonstrated that the grain yield of OsNAC6 root-specific overexpressing transgenic rice lines was less affected by drought stress than were nontransgenic controls. Genome-wide analyses of loss- and gain-of-function mutants revealed that OsNAC6 up-regulates the expression of direct target genes involved in membrane modification, nicotianamine (NA) biosynthesis, glutathione relocation, 3'-phophoadenosine 5'-phosphosulphate accumulation and glycosylation, which represent multiple drought tolerance pathways. Moreover, overexpression of NICOTIANAMINE SYNTHASE genes, direct targets of OsNAC6, promoted the accumulation of the metal chelator NA and, consequently, drought tolerance. Collectively, OsNAC6 orchestrates novel molecular drought tolerance mechanisms and has potential for the biotechnological development of high-yielding crops under water-limiting conditions.


Subject(s)
Oryza/metabolism , Plant Proteins/metabolism , Plant Roots/metabolism , Transcription Factors/metabolism , Azetidinecarboxylic Acid/analogs & derivatives , Azetidinecarboxylic Acid/metabolism , Biotechnology , Droughts , Gene Expression Regulation, Plant/genetics , Gene Expression Regulation, Plant/physiology , Genome-Wide Association Study , Oryza/genetics , Plant Proteins/genetics , Plant Roots/genetics , Plants, Genetically Modified/genetics , Plants, Genetically Modified/metabolism , Transcription Factors/genetics
13.
BMC Genomics ; 17: 563, 2016 08 08.
Article in English | MEDLINE | ID: mdl-27501838

ABSTRACT

BACKGROUND: Plant transcriptome profiling has provided a tool for understanding the mechanisms by which plants respond to stress conditions. Analysis of genome-wide transcriptome will provides a useful dataset of drought responsive noncoding RNAs and their candidate target genes that may be involved in drought stress responses. RESULTS: Here RNA-seq analyses of leaves from drought stressed rice plants was performed, producing differential expression profiles of noncoding RNAs. We found that the transcript levels of 66 miRNAs changed significantly in response to drought conditions and that they were negatively correlated with putative target genes during the treatments. The negative correlations were further validated by qRT-PCR using total RNAs from both drought-treated leaves and various tissues at different developmental stages. The drought responsive miRNA/target pairs were confirmed by the presence of decay intermediates generated by miRNA-guided cleavages in Parallel Analysis of RNA Ends (PARE) libraries. We observed that the precursor miR171f produced two different mature miRNAs, miR171f-5p and miR171f-3p with 4 candidate target genes, the former of which was responsive to drought conditions. We found that the expression levels of the miR171f precursor negatively correlated with those of one candidate target gene, but not with the others, suggesting that miR171f-5p was drought-responsive, with Os03g0828701-00 being a likely target. Pre-miRNA expression profiling indicated that miR171f is involved in the progression of rice root development and growth, as well as the response to drought stress. Ninety-eight lncRNAs were also identified, together with their corresponding antisense transcripts, some of which were responsive to drought conditions. CONCLUSIONS: We identified rice noncoding RNAs (66 miRNAs and 98 lncRNAs), whose expression was highly regulated by drought stress conditions, and whose transcript levels negatively correlated with putative target genes.


Subject(s)
Droughts , Gene Expression Profiling , Gene Expression Regulation, Plant , Oryza/genetics , RNA, Untranslated , Stress, Physiological/genetics , Transcriptome , Adaptation, Biological , MicroRNAs/genetics , Phenotype , RNA Interference , RNA, Antisense/genetics
14.
Food Chem ; 196: 236-41, 2016 04 01.
Article in English | MEDLINE | ID: mdl-26593488

ABSTRACT

Transgenic overexpression of the Arabidopsis gene for jasmonic acid carboxyl methyltransferase (AtJMT) is involved in regulating jasmonate-related plant responses. To examine its role in the compositional profile of soybean (Glycine max), we compared the seeds from field-grown plants that over-express AtJMT with those of the non-transgenic, wild-type (WT) counterpart. Our analysis of chemical compositions included proximates, amino acids, fatty acids, isoflavones, and antinutrients. Overexpression of AtJMT in the seeds resulted in decreased amounts of tryptophan, palmitic acid, linolenic acid, and stachyose, but increased levels of gadoleic acid and genistein. In particular, seeds from the transgenic soybeans contained 120.0-130.5% more genistein and 60.5-82.1% less stachyose than the WT. A separate evaluation of ingredient values showed that all were within the reference ranges reported for commercially available soybeans, thereby demonstrating the substantial equivalence of these transgenic and non-transgenic seeds.


Subject(s)
Glycine max/chemistry , Methyltransferases/chemistry , Methyltransferases/genetics , Plants, Genetically Modified/chemistry , Seeds/chemistry
15.
Plant Sci ; 241: 199-210, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26706071

ABSTRACT

The mechanisms of plant response and adaptation to drought stress require the regulation of transcriptional networks via the induction of drought-responsive transcription factors. Nuclear Factor Y (NF-Y) transcription factors have aroused interest in roles of plant drought stress responses. However, the molecular mechanism of the NF-Y-induced drought tolerance is not well understood. Here, we functionally analyzed two rice NF-YA genes, OsNF-YA7 and OsNF-YA4. Expression of OsNF-YA7 was induced by drought stress and its overexpression in transgenic rice plants improved their drought tolerance. In contrast, OsNF-YA4 expression was not increased by drought stress and its overexpression in transgenic rice plants did not affect their sensitivity to drought stress. OsNF-YA4 expression was highly induced by the stress-related hormone abscisic acid (ABA), while OsNF-YA7 was not, indicating that OsNF-YA7 mediates drought tolerance in an ABA-independent manner. Analysis of the OsNF-YA7 promoter revealed three ABA-independent DRE/CTR elements and RNA-seq analysis identified 48 genes downstream of OsNFYA7 action putatively involved in the OsNF-YA7-mediated drought tolerance pathway. Taken together, our results suggest an important role for OsNF-YA7 in rice drought stress tolerance.


Subject(s)
Abscisic Acid/metabolism , Droughts , Gene Expression Regulation, Plant , Oryza/physiology , Plant Proteins/genetics , Transcription Factors/genetics , CCAAT-Binding Factor , Oryza/genetics , Plant Proteins/metabolism , Plants, Genetically Modified/genetics , Plants, Genetically Modified/physiology , Stress, Physiological , Transcription Factors/metabolism
16.
Plant Sci ; 236: 304-12, 2015 Jul.
Article in English | MEDLINE | ID: mdl-26025543

ABSTRACT

Auxin signaling is a fundamental part of many plant growth processes and stress responses and operates through Aux/IAA protein degradation and the transmission of the signal via auxin response factors (ARFs). A total of 31 Aux/IAA genes have been identified in rice (Oryza sativa), some of which are induced by drought stress. However, the mechanistic link between Aux/IAA expression and drought responses is not well understood. In this study we found that the rice Aux/IAA gene OsIAA6 is highly induced by drought stress and that its overexpression in transgenic rice improved drought tolerance, likely via the regulation of auxin biosynthesis genes. We observed that OsIAA6 was specifically expressed in the axillary meristem of the basal stem, which is the tissue that gives rise to tillers. A knock-down mutant of OsIAA6 showed abnormal tiller outgrowth, apparently due to the regulation of the auxin transporter OsPIN1 and the rice tillering inhibitor OsTB1. Our results confirm that the OsIAA6 gene is involved in drought stress responses and the control of tiller outgrowth.


Subject(s)
Gene Expression Regulation , Indoleacetic Acids/metabolism , Oryza/growth & development , Oryza/physiology , Plant Proteins/genetics , Acclimatization , Droughts , Oryza/genetics , Plant Proteins/metabolism , Plant Stems/growth & development
17.
Planta ; 241(6): 1529-41, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25809149

ABSTRACT

MAIN CONCLUSION: We have characterized four novel constitutive promoters ARP1, H3F3, HSP and H2BF3 that are active in all tissues/stages of transgenic plants and stable over two homozygous generations. Gene promoters that are active and stable over several generations in transgenic plants are valuable tools for plant research and biotechnology. In this study, we characterized four putative constitutive promoters (ARP1, H3F3, HSP and H2BF3) in transgenic rice plants. Promoter regions were fused to the green fluorescence protein (GFP) reporter gene and transformed into rice. Single-copy transgenic lines were then selected and promoter activity was analyzed in various organs and tissues of two successive homozygous generations. All four promoters showed a broad expression profile in most tissues and developmental stages, and indeed the expression of the ARP1 and H3F3 promoters was even greater than that of the PGD1 promoter, a previously described constitutive promoter that has been used in transgenic rice. This observation was based on expression levels in leaves, roots, dry seeds and flowers in both the T2 and T3 generations. Each promoter exhibited comparable levels of activity over two homozygous generations with no sign of transgene silencing, which is an important characteristic of promoters to be used in crop biotechnology applications. These promoters therefore have considerable potential value for the stable and constitutive expression of transgenes in monocotyledonous crops.


Subject(s)
Gene Expression Regulation, Plant , Oryza/genetics , Promoter Regions, Genetic , Genome, Plant , Green Fluorescent Proteins/metabolism , Homozygote , Organ Specificity/genetics , Oryza/growth & development , Plants, Genetically Modified
18.
PLoS One ; 10(2): e0117431, 2015.
Article in English | MEDLINE | ID: mdl-25689861

ABSTRACT

Genomic imprinting, an epigenetic process in mammals and flowering plants, refers to the differential expression of alleles of the same genes in a parent-of-origin-specific manner. In Arabidopsis, imprinting occurs primarily in the endosperm, which nourishes the developing embryo. Recent high-throughput sequencing analyses revealed that more than 200 loci are imprinted in Arabidopsis; however, only a few of these imprinted genes and their imprinting mechanisms have been examined in detail. Whereas most imprinted loci characterized to date are maternally expressed imprinted genes (MEGs), PHERES1 (PHE1) and ADMETOS (ADM) are paternally expressed imprinted genes (PEGs). Here, we report that UPWARD CURLY LEAF1 (UCL1), a gene encoding an E3 ligase that degrades the CURLY LEAF (CLF) polycomb protein, is a PEG. After fertilization, paternally inherited UCL1 is expressed in the endosperm, but not in the embryo. The expression pattern of a ß-glucuronidase (GUS) reporter gene driven by the UCL1 promoter suggests that the imprinting control region (ICR) of UCL1 is adjacent to a transposable element in the UCL1 5'-upstream region. Polycomb Repressive Complex 2 (PRC2) silences the maternal UCL1 allele in the central cell prior to fertilization and in the endosperm after fertilization. The UCL1 imprinting pattern was not affected in paternal PRC2 mutants. We found unexpectedly that the maternal UCL1 allele is reactivated in the endosperm of Arabidopsis lines with mutations in cytosine DNA METHYLTRANSFERASE 1 (MET1) or the DNA glycosylase DEMETER (DME), which antagonistically regulate CpG methylation of DNA. By contrast, maternal UCL1 silencing was not altered in mutants with defects in non-CpG methylation. Thus, silencing of the maternal UCL1 allele is regulated by both MET1 and DME as well as by PRC2, suggesting that divergent mechanisms for the regulation of PEGs evolved in Arabidopsis.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis/genetics , Endosperm/metabolism , F-Box Proteins/genetics , Gene Expression Regulation, Plant , Genomic Imprinting , Polycomb-Group Proteins/metabolism , Ubiquitin-Protein Ligases/genetics , Alleles , Arabidopsis/metabolism , Base Sequence , DNA Methylation , Transgenes/genetics
19.
BMB Rep ; 47(1): 27-32, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24209631

ABSTRACT

Plant abiotic stress tolerance has been modulated by engineering the trehalose synthesis pathway. However, many stress-tolerant plants that have been genetically engineered for the trehalose synthesis pathway also show abnormal development. The metabolic intermediate trehalose 6-phosphate has the potential to cause aberrations in growth. To avoid growth inhibition by trehalose 6-phosphate, we used a gene that encodes a bifunctional in-frame fusion (BvMTSH) of maltooligosyltrehalose synthase (BvMTS) and maltooligosyltrehalose trehalohydrolase (BvMTH) from the nonpathogenic bacterium Brevibacterium helvolum. BvMTS converts maltooligosaccharides into maltooligosyltrehalose and BvMTH releases trehalose. Transgenic rice plants that over-express BvMTSH under the control of the constitutive rice cytochrome c promoter (101MTSH) or the ABA-inducible Ai promoter (105MTSH) show enhanced drought tolerance without growth inhibition. Moreover, 101MTSH and 105MTSH showed an ABA-hyposensitive phenotype in the roots. Our results suggest that over-expression of BvMTSH enhances drought-stress tolerance without any abnormal growth and showes ABA hyposensitive phenotype in the roots.


Subject(s)
Bacterial Proteins , Brevibacterium/enzymology , Droughts , Glucosidases , Glucosyltransferases , Abscisic Acid/pharmacology , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Gene Expression , Glucosidases/genetics , Glucosidases/metabolism , Glucosyltransferases/genetics , Glucosyltransferases/metabolism , Oligosaccharides/metabolism , Oryza/drug effects , Oryza/growth & development , Oryza/metabolism , Phenotype , Plant Growth Regulators/pharmacology , Plant Proteins/genetics , Plant Roots/drug effects , Plant Roots/metabolism , Plants, Genetically Modified/growth & development , Plants, Genetically Modified/metabolism , Promoter Regions, Genetic , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Sugar Phosphates/metabolism , Trehalose/analogs & derivatives , Trehalose/metabolism
20.
Plant Signal Behav ; 8(6): e20783, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23603962

ABSTRACT

Cross-talk between hormones is required for plant response to developmental cues and environmental stresses. This cross-talk is achieved through several regulators located in convergence point of distinct hormonal signaling. In plant defense responses, salicylic acid and jasmonic acid affect each other in antagonistic manner. In a recent study we showed that AtMYB44 transcription factor positively regulates SA-mediated defense expression and enhanced resistance to Pst DC3000. On the other hand, AtMYB44 negatively regulates expression of JA-mediated defense gene expression and downregulated resistance to Alternaria brassicicola. Effects of AtMYB44 in SA- and JA-mediated defense responses were achieved through direct regulation of WRKY70 expression which acts as an integrator of cross-talk between SA and JA in plant defense responses. Here we provide further evidence that AtMYB44 regulates defense responses by transcriptional activation of downstream gene, WRKY70. This result shows that AtMYB44 is an integrator of cross-talk between SA and JA in plant defense responses.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Plant Immunity , Transcription Factors/metabolism , Arabidopsis/immunology , Cyclopentanes/metabolism , Gene Expression Regulation, Plant , Oxylipins/metabolism , Receptor Cross-Talk , Salicylic Acid/metabolism , Transcriptional Activation
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