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1.
J Phys Condens Matter ; 36(25)2024 Mar 28.
Article in English | MEDLINE | ID: mdl-38498945

ABSTRACT

The present paper is primarily focused to understand the strain driven alterations in thermoelectric (TE) properties of two-dimensional SiH and GeH monolayers from first-principle calculations. Electronic band structures and the associated TE properties of the compounds under ambient and external strains have been critically unveiled in terms of Seebeck coefficients, electrical conductivities, power factors and electronic thermal conductivities. The phonon dispersion relations have also been investigated to estimate the lattice thermal conductivities of the systems. The TE figure of merits of SiH and GeH monolayers under ambient and external strains have been explored from the collective effects of their Seebeck coefficients, electrical conductivities, electronic and lattice thermal conductivities. The present study will be helpful in exploring the strain induced TE responses of SiH and GeH compounds which in turn may bear potential applications in clean and global energy conservation.

2.
RSC Adv ; 14(9): 6385-6397, 2024 Feb 14.
Article in English | MEDLINE | ID: mdl-38380242

ABSTRACT

The present paper is primarily focused on predicting the band gaps of nitride perovskites from machine learning (ML) models. The ML models have been framed from the feature descriptors and band gap values of 1563 inorganic nitride perovskites having formation energies <-0.026 eV and band gaps ranging from ∼1.0 to 3.1 eV. Four supervised ML models such as multi-layer perceptron (MLP), gradient boosted decision tree (GBDT), support vector regression (SVR) and random forest regression (RFR) have been considered to predict the band gaps of the said systems. The accuracy of each model has been tested from mean absolute error, root-mean-square error and determination coefficient R2 values. The bivariate plots between the predicted and input band gaps of the compounds for both the training and test datasets have also been estimated. Additionally, two ABN3-type nitride perovskites CeBN3 (B = Mo, W) have been selected and their electronic band structures and optoelectronic properties have been studied from density functional theory (DFT) calculations. The band gap values of the said compounds have been estimated from DFT calculations at PBE, HSE06, G0W0@PBE, G0W0@HSE06 level of theories. The present study will be helpful in exploring the ML models in predicting the band gaps of nitride perovskites which in turn may bear potential applications in photovoltaic cells and optical luminescent devices.

3.
Front Chem ; 11: 1145877, 2023.
Article in English | MEDLINE | ID: mdl-37304685

ABSTRACT

Parkinson's disease is an age-related neurological disorder, and the pathology of the disease is linked to different types of aggregates of α-synuclein or alpha-synuclein (aS), which is an intrinsically disordered protein. The C-terminal domain (residues 96-140) of the protein is highly fluctuating and possesses random/disordered coil conformation. Thus, the region plays a significant role in the protein's solubility and stability by an interaction with other parts of the protein. In the current investigation, we examined the structure and aggregation behavior of two artificial single point mutations at a C-terminal residue at position 129 that represent a serine residue in the wild-type human aS (wt aS). Circular Dichroism (CD) and Raman spectroscopy were performed to analyse the secondary structure of the mutated proteins and compare it to the wt aS. Thioflavin T assay and atomic force microscopy imaging helped in understanding the aggregation kinetics and type of aggregates formed. Finally, the cytotoxicity assay gave an idea about the toxicity of the aggregates formed at different stages of incubation due to mutations. Compared to wt aS, the mutants S129A and S129W imparted structural stability and showed enhanced propensity toward the α-helical secondary structure. CD analysis showed proclivity of the mutant proteins toward α-helical conformation. The enhancement of α-helical propensity lengthened the lag phase of fibril formation. The growth rate of ß-sheet-rich fibrillation was also reduced. Cytotoxicity tests on SH-SY5Y neuronal cell lines established that the S129A and S129W mutants and their aggregates were potentially less toxic than wt aS. The average survivability rate was ∼40% for cells treated with oligomers (presumably formed after 24 h of incubation of the freshly prepared monomeric protein solution) produced from wt aS and ∼80% for cells treated with oligomers obtained from mutant proteins. The relative structural stability with α-helical propensity of the mutants could be a plausible reason for their slow rate of oligomerization and fibrillation, and this was also the possible reason for reduced toxicity to neuronal cells.

5.
J Biomech Eng ; 145(2)2023 02 01.
Article in English | MEDLINE | ID: mdl-36149021

ABSTRACT

Using finite element (FE) models of intact and implanted hemipelvises, the study aimed to investigate the influences of musculoskeletal loading and implant-bone interface conditions on preclinical analysis of an uncemented acetabular component after total hip arthroplasty (THA). A new musculoskeletal loading dataset, corresponding to daily activities of sitting up-down, stairs up-down and normal walking, for a pelvic bone was generated based on previously validated Gait2392 model. Three implant-bone interface conditions, fully bonded and debonded having two rim press-fits (1 mm and 2 mm), were analyzed. High tensile (2000-2415 µÏµ) and compressive strains (900-1035 µÏµ) were predicted for 2 mm press-fit, which might evoke microdamage in pelvic cortex. Strain shielding in periprosthetic cancellous bone was higher for bonded condition during sitting up activity, compared to other combinations of interface and loading conditions. Only the nodes around acetabular rim (less than 6%) were susceptible to interfacial debonding. Although maximum micromotion increased with increase in press-fit, postoperatively for all load cases, these were within a favorable range (52-143 µm) for bone ingrowth. Micromotions reduced (39-105 µm) with bone remodeling, indicating lesser chances of implant migration. Bone apposition was predominant around acetabular rim, compared to dome, for all interface conditions. Periprosthetic bone resorption of 10-20% and bone apposition of 10-15% were predicted for bonded condition. Whereas for press-fit (1 mm and 2 mm), predominant bone apposition of 200-300% was observed. This study highlights the importance of variations in loading and interface conditions on in silico evaluations of an uncemented acetabular component.


Subject(s)
Arthroplasty, Replacement, Hip , Bone Resorption , Hip Prosthesis , Acetabulum/physiology , Bone Remodeling/physiology , Finite Element Analysis , Humans , Models, Biological
6.
Front Chem ; 10: 1034060, 2022.
Article in English | MEDLINE | ID: mdl-36458160

ABSTRACT

SERS active substrate fabricated through self-assembly of Gold nanoparticles on the disjointed networks of Heat-cooled Calf Thymus DNA (HC-Ct DNA) Langmuir-Blodgett (LB) film has been reported. Adsorption kinetics of HC-Ct DNA molecules at the air-water interface has been studied explicitly. The UV-Vis electronic absorption spectra in conjunction with the FESEM images collectively suggest the presence of H- type aggregated domains most likely owing to plane-to-plane self-association of the HC-Ct DNA molecules aligned vertically on the surface of the LB film. Elemental composition and the morphological features of the as-prepared substrate (APS) are explored from XPS analysis and the FESEM, AFM images respectively. The SERS efficacy of the APS has been tested with trace concentrations of 4-Mercaptopyridine molecule. Finally, this SERS active substrate has also been used for the detection of malathion at ultrasensitive concentrations.

7.
ACS Omega ; 7(32): 27818-27830, 2022 Aug 16.
Article in English | MEDLINE | ID: mdl-35990435

ABSTRACT

This paper reports the adsorptive behavior of the 4-mercaptopyridine (4MPy) molecule soaked in gold nanoparticles (AuNPs) that remain embedded in the bilayer Langmuir-Blodgett (LB) film matrix of stearic acid (SA) for various soaking times (STs). The as-fabricated substrate proved to be an efficient SERS sensing platform that can sense the analyte 4MPy molecules at trace concentrations of ∼1.0 × 10-9 M. The XPS study not only reveals the adsorption of 4Mpy molecules with AuNPs via a sulfur atom but also suggests partial degradation of the analyte molecule upon adsorption. This observation is further substantiated from the SERS spectral profile, which shows unusual broadening of the enhanced Raman bands of the molecule at higher STs. The experimental observations are supported by Born-Oppenheimer on-the-fly molecular dynamics (BO-OF-MD), time-resolved wavelet transform theory (WT), and the DFT calculations based on adcluster models. Selective enhancements of Raman bands in the SERS spectra further suggest the involvement of charge transfer (CT) interaction to the overall enhancements of Raman bands of the analyte molecule. The molecule → CT contribution has been estimated from electron density difference calculations and the corresponding CT distance; the amount of CT is also envisaged.

8.
J Biomol Struct Dyn ; 40(12): 5328-5344, 2022 08.
Article in English | MEDLINE | ID: mdl-33410370

ABSTRACT

Binding interactions of the phenazinium dye Janus green blue (JGB) with human and bovine serum albumins (BSA - and BSA) have been explored for the first time from multi-spectroscopic and calorimetric measurements aided by in silico calculations. The formation of ground state complexes between JGB and the respective serum albumins have been suggested from the UV-Vis and steady-state fluorescence spectroscopic studies. The nonlinear Stern Volmer (SV) plots at higher concentrations of JGB primarily indicate the formation of more than one ground state complexes in BSA -/BSA-JGB systems. Modified SV plots and isothermal titration calorimetry (ITC) studies however signify the possibilities of one type of binding complexes between HSA/BSA - JGB systems. Binding constants and the thermodynamic parameters associated with the HSA/BSA-JGB complexes have also been estimated from the ITC studies. Förster distances (R0) for HSA-JGB and BSA-JGB complexes are estimated from Förster resonance energy transfer (FRET) results. Variations in the micro-environment of the Tyr and Trp residues of the serum proteins in presence of JGB have been observed from the synchronous fluorescence measurements. The conformational changes in the protein structures induced by the dye JGB have been revealed from 3 D fluorescence and circular dichroism (CD) studies. The experimental observations are supported by in silico calculations. This in depth investigation on the interactions of serum albumins with JGB may provide the fundamental information toward exploring the therapeutic efficacy of JGB as a potent drug molecule. Communicated by Ramaswamy H. Sarma.


Subject(s)
Serum Albumin, Bovine , Serum Albumin , Azo Compounds , Binding Sites , Calorimetry , Circular Dichroism , Humans , Molecular Docking Simulation , Protein Binding , Serum Albumin/chemistry , Serum Albumin, Bovine/chemistry , Spectrometry, Fluorescence , Thermodynamics
9.
J Biomol Struct Dyn ; 39(10): 3533-3547, 2021 Jul.
Article in English | MEDLINE | ID: mdl-32397828

ABSTRACT

Binding interaction between the small antitumor drug Hydroxyurea (HU) and Bovine Hemoglobin (BHb) has been explored in details from multi-spectroscopic and computational studies. The formation of ground state complex between BHb and HU has been suggested from the electronic UV-Vis and steady-state fluorescence spectroscopic studies. The quenching in fluorescence of BHb in presence of HU at varied concentrations has been analyzed from the SV plots. Static type of quenching has been suggested from time-resolved fluorescence spectroscopic studies. Binding parameters associated with the BHb-HU complex have also been estimated from the temperature dependent fluorescence spectroscopic studies. Alterations in the micro-environment of the Tyr and Trp residues of BHb in presence of HU have been observed from the synchronous fluorescence measurement. The result obtained from CD spectroscopic measurements signify partial unfolding in the secondary structure of BHb due to binding with HU molecule. The experimental observations are supported by theoretical studies. Molecular docking and molecular dynamics simulations have been performed to investigate the structural stability and compactness of BHb in the binding interaction between BHb and HU. The interaction of BHb with HU is expected to provide fundamental insights towards understanding the therapeutic effectiveness of HU upon interaction with BHb used in chemo-, radio therpeutic procedures and also in the treatment of SCD.


Subject(s)
Molecular Dynamics Simulation , Pharmaceutical Preparations , Animals , Binding Sites , Cattle , Circular Dichroism , Hemoglobins/metabolism , Hydroxyurea , Molecular Docking Simulation , Protein Binding , Spectrometry, Fluorescence , Thermodynamics
10.
Phys Chem Chem Phys ; 22(16): 8719-8729, 2020 Apr 28.
Article in English | MEDLINE | ID: mdl-32270808

ABSTRACT

Herein, we have reported the wavelength-scanned (WS) SERS spectra of 4-mercaptopyridine molecules (4-MPy) adsorbed on gold nanoparticles immobilised in a Langmuir Reverse Schaefer (L-RSh) film matrix of 5CB molecules. The WS-SERS spectral profile exhibited an increment in the intensity of the enhanced Raman bands of 4-MPy with an increase in the wavelength of the excitation laser source. The rationale behind the experimental observations was supported by the simulated extinction spectra and the enhancement factor measurements of the modelled systems using the T-matrix formalism. The SERS intensity fluctuations in the band located at 1000 cm-1 for the 4-MPy molecule, as obtained from three different locations in the L-RSh film substrate, were also analyzed. Surprisingly, depending on the spatial locations of the substrates, the intensity fluctuations of the abovementioned band exhibit both Poisson and Gaussian distributions but the maximum number of probe molecules that can reside in the scattering areas under investigation cannot exceed sixteen. These observations suggest that the origin of SERS from single/few molecules or from the ensemble-averaged system cannot be inferred from the statistical distributions of the Raman intensity fluctuations. The present experimental observations also revealed the relation between the near-field plasmonic behaviors of the substrate with the corresponding far-field SERS spectra of the 4-MPy molecule.

11.
J Photochem Photobiol B ; 193: 89-99, 2019 Apr.
Article in English | MEDLINE | ID: mdl-30825814

ABSTRACT

Binding interactions between the drug Juglone (JUG) and Lysozyme (LYZ) have been explored in details from spectroscopic studies aided by in silico calculations. UV-Vis, steady state and time resolved fluorescence spectroscopic studies indicate the formation of LYZ-JUG complex in the ground state. Quenching of corrected fluorescence spectra of LYZ in presence of JUG at varied concentrations in different temperature range have been estimated from Stern-Volmer (SV) plots. Time resolved fluorescence spectroscopic studies confirm the mechanism of quenching to be of static type. Binding constant associated with the LYZ-JUG complex has been estimated from Scatchard plot. The number of binding sites, thermodynamic parameters and the modes of interaction are also estimated. Synchronous fluorescence spectra monitored at two discrete wavelength windows confirm the prominent role of Tryptophan residues towards quenching of fluorescence in LYZ. The circular dichroism (CD) spectra signify alterations in the population of α-helical content within the secondary structure of LYZ in presence of JUG molecules. REES of LYZ in the presence of JUG further signify definite impact of the drug JUG molecule on the Trp residues of the protein. The experimental observations are supported by in silico molecular docking and molecular dynamics simulations.


Subject(s)
Muramidase/metabolism , Naphthoquinones/metabolism , Binding Sites , Circular Dichroism , Hydrogen Bonding , Molecular Docking Simulation , Muramidase/chemistry , Naphthoquinones/chemistry , Protein Binding , Protein Conformation, alpha-Helical , Spectrometry, Fluorescence , Temperature , Thermodynamics
12.
J Phys Chem B ; 122(45): 10279-10290, 2018 11 15.
Article in English | MEDLINE | ID: mdl-30346761

ABSTRACT

This article describes how a natural alkaloid allocryptopine (ALL) is able to differentiate two forms of biologically relevant human telomeric (htel22) G-quadruplex DNAs (GQ-DNA) depending on the presence of K+ and Na+ ions by steady-state and time-resolved spectroscopic techniques. For both interactions, predominant involvements of static-type quenching mechanism with the negligible influence of dynamic collision are established by UV-vis absorption and fluorescence emission study, which is further supported by fluorescence lifetime measurements. ALL exhibits appreciable affinity toward both GQ-DNAs. Both the mixed-hybrid (3 + 1) quadruplex structures in K+ ions and the basket-type antiparallel quadruplex structure under Na+ condition are converted to parallel types in the presence of ALL. Fluorescence intercalator displacement assay experiment revealed modest selectivity of ALL to both quadruplexes over duplex DNA along with higher selectivity for antiparallel types among the two quadruplexes via groove and/or loop binding, which is distinct from the conventional π-stacking of the ligands on external G-quartets. ALL stabilized both GQ-DNA topologies moderately. The differences in the dynamics of ALL within both DNA environments have been demonstrated vividly by time-resolved anisotropy measurements using the wobbling-in-cone model. These results suggest groove binding with antiparallel G-quartet with high affinity and moderate loop binding with mixed-hybrid G-quartet accompanied by the partial end stacking additionally in both of the cases. Our conclusions are further supported by steady-state anisotropy measurements and molecular docking. The present investigation can be used in the development of a biocompatible antitumour/anticancer agent targeting particular GQ-DNA conformation.


Subject(s)
Berberine Alkaloids/chemistry , DNA/chemistry , Anisotropy , DNA/genetics , Density Functional Theory , G-Quadruplexes , Humans , Intercalating Agents/chemistry , Models, Chemical , Molecular Docking Simulation , Potassium/chemistry , Sodium/chemistry
13.
ACS Omega ; 3(6): 6794-6803, 2018 Jun 30.
Article in English | MEDLINE | ID: mdl-31458850

ABSTRACT

The physics behind the barriers to internal rotation of acetyl chloride (AC) molecule has been reported. The AC molecule closely resembles the molecular structure of acetaldehyde; the only subtle difference is the presence of a heavy chlorine atom in place of the hydrogen atom of the aldehyde group for the latter. This paper aims to study the effect of substitution of the heavy chlorine atom on the barrier energetics of the AC molecule. The reason behind the barrier for the AC molecule has been estimated for the first time from the unified approach using barrier energetics, natural bond orbital, nuclear virial, and relaxation analyses using density functional theory, Car-Parrinello molecular dynamics, and wavelet transform theory. Complete analyses reveal the concomitant relaxations of both the in-plane Cmethyl-C1 and Cmethyl-H4 bonds toward understanding the origin of the barrier due to internal rotation for the AC molecule. The large negative value of "V 6" further suggests that both the abovementioned degrees of freedom are coupled with the -CH3 torsional vibration of the molecule. The coupling matrix (H 12) element has also been estimated. Time-resolved band stretching frequencies of Cmethyl-C1 and C1-Cl3 bonds of the AC molecule, as obtained from wavelet transformation analysis, primarily preclude the possibility of coupling between the C1-Cl3 bond and the torsional motion associated with the methyl group of the molecule.

14.
Spectrochim Acta A Mol Biomol Spectrosc ; 183: 402-407, 2017 Aug 05.
Article in English | MEDLINE | ID: mdl-28472744

ABSTRACT

Attention has been directed to prepare exclusive one-dimensional silver nanostructure from the linear inorganic polymer AgCN. Successive color change from yellow to orange, to red and finally to green reflects the evolution of high yielding Ag nanorods (NRs) from well-known -[Ag-CN]- chains of polymeric AgCN at room temperature. The parental 1D morphology of AgCN is retained within the as-synthesized Ag NRs. So we could successfully exploit the Ag NR for surface-enhanced Raman scattering (SERS) studies for sensing a popular milk adulterant melamine down to picomolar level. We observed interesting concentration dependent selective SERS band enhancement of melamine. The enhanced ~1327cm-1 SERS signal intensity at lower concentration (10-9 and 10-12M) of melamine speaks for the preferential participation of -C-N of melamine molecule with Ag surface. On the other hand, '-NH2' group together with ring 'N' participation of melamine molecule onto Ag surface suggested an adsorptive stance at higher (10-3-10-7M) concentration range. Thus the binding modes of the molecule at the Ag surface justify its fluxional behavior.

15.
Spectrochim Acta A Mol Biomol Spectrosc ; 169: 108-15, 2016 Dec 05.
Article in English | MEDLINE | ID: mdl-27344521

ABSTRACT

A pH dependent normal Raman scattering (NRS) and surface enhanced Raman scattering (SERS) spectral patterns of citrazinic acid (CZA), a biologically important molecule, have been investigated. The acid, with different pKa values (~4 and ~11) for the two different functional groups (-COOH and -OH groups), shows interesting range of color changes (yellow at pH~14 and brown at pH~2) with the variation in solution pH. Thus, depending upon the pH of the medium, CZA molecule can exist in various protonated and/or deprotonated forms. Here we have prescribed the existence different possible forms of CZA at different pH (Forms "C", "H" and "Dprot" at pH~14 and Forms "A", "D", and "P" at pH~2 respectively). The NRS spectra of these solutions and their respective SERS spectra over gold nanoparticles were recorded. The spectra clearly differ in their spectral profiles. For example the SERS spectra recorded with the CZA solution at pH~2 shows blue shift for different bands compared to its NRS window e.g. 406 to 450cm(-1), 616 to 632cm(-1), 1332 to 1343cm(-1) etc. Again, the most enhanced peak at ~1548cm(-1) in NRS while in the SERS window this appears at ~1580cm(-1). Similar observation was also made for CZA at pH~14. For example, the 423cm(-1) band in the NRS profile experience a blue shift and appears at ~447cm(-1) in the SERS spectrum as well as other bands at ~850, ~1067 and ~1214cm(-1) in the SERS window are markedly enhanced. It is also worth noting that the SERS spectra at the different pH also differ from each other. These spectral differences indicate the existence of various adsorptive forms of the CZA molecule depending upon the pH of the solution. Therefore based on the experimental findings we propose different possible molecular forms of CZA at different pH (acidic and alkaline) conditions. For example forms 'A', 'D' and 'P' existing in acidic pH (pH~2) and three other deprotonated forms 'C', 'H' and 'Dprot' in alkaline pH (pH~14). The DFT calculations for these prescribed model systems were also carried out to have a plausible understanding of their equilibrium geometries and the vibrational wavenumbers. An idea about the molecular orientation of the adsorbate over nanocolloidal gold substrate is also documented.

16.
J Nanosci Nanotechnol ; 15(8): 5775-84, 2015 Aug.
Article in English | MEDLINE | ID: mdl-26369151

ABSTRACT

UV-vis absorption, steady state and time resolved spectroscopic investigations in pico and nanosecond time domain were made in the different environments on a novel synthesized dyad, 3-(2-methoxynaphthalen-1-yl)-1-(4-methoxyphenyl)prop-2-en-1-one (MNTMA) in its pristine form and when combined with gold (Au) nanoparticles i.e., in its nanocomposite structure. Both steady state and time resolved measurements coupled with the DFT calculations performed by using Gaussian 03 suit of software operated in the linux operating system show that though the dyad exhibits mainly the folded conformation in the ground state but on photoexcitation the nanocomposite form of dyad prefers to be in elongated structure in the excited state indicating its photoswitchable nature. Due to the predominancy of elongated isomeric form of the dyad in the excited state in presence of Au Nps, it appears that the dyad MNTMA may behave as a good light energy converter specially in its nanocomposite form. As larger charge separation rate (kcs ~ 4 x 10(8) s-1) is found relative to the rate associated with the energy wasting charge recombination processes (kcR ~ 3 x 10(5) s-1) in the nanocomposite form of the dyad, it demonstrates the suitability of constructing the efficient light energy conversion devices with Au-dyad hybrid nanomaterials.


Subject(s)
Electric Power Supplies , Gold/chemistry , Metal Nanoparticles/chemistry , Models, Chemical , Nanocomposites/chemistry , Organic Chemicals/chemistry , Computer Simulation , Energy Transfer/radiation effects , Equipment Design , Equipment Failure Analysis , Gold/radiation effects , Light , Materials Testing , Metal Nanoparticles/radiation effects , Nanocomposites/radiation effects , Organic Chemicals/radiation effects , Particle Size , Radiation Dosage , Spectrum Analysis/methods , Surface Properties , Transducers
17.
J Phys Chem A ; 119(29): 8062-75, 2015 Jul 23.
Article in English | MEDLINE | ID: mdl-26145705

ABSTRACT

The conformational preferences of the industrially and biologically significant propyl acetate (PA) molecule have been investigated by Raman and FTIR spectra, aided by ab initio and Car-Parrinello molecular dynamics (CPMD) simulation studies. The PA molecule can exist in various rotameric forms at room temperature, trans-trans [TT], trans-gauche [(TG(+))/(TG(-))], gauche-trans [(G(+)T)/(G(-)T)], and gauche-gauche [(G(+)G(-))/(G(-)G(+))], depending upon the rotation about the O3-C4 and C4-C5 bonds of the molecule. The vibrational signatures of different rotameric forms of the PA molecule have been assigned for the first time. Raman and temperature-dependent FTIR spectra of the PA molecule envisage the coexistence of the TT, TG(+)/TG(-), G(+)T/G(-)T, and G(+)G(-)/G(-)G(+) forms of the PA molecule at room temperature. However, at low (ca. -95 °C) and high temperatures (ca. 65 °C), the TG(+) form of the PA molecule is estimated to be preponderant. These results are substantiated by the CPMD simulations, together with the estimation of fwhm values of the vibrational signatures of the PA molecule recorded at high-, room-, and low-temperature domains.

18.
Spectrochim Acta A Mol Biomol Spectrosc ; 151: 796-806, 2015 Dec 05.
Article in English | MEDLINE | ID: mdl-26172467

ABSTRACT

The SER(R)S spectra of Methylene Blue (MB) molecule adsorbed on gold nanocolloidal particles (AuNCs) have been investigated. The adsorptive parameters of the molecule adsorbed on AuNCs have been evaluated with the aid of Fluorescence Spectroscopy study. Fluorescence spectroscopic studies have been further applied to understand the concentration of probe molecule actually adsorbed on AuNC surfaces. Gigantic enhancements ∼10(6)-10(16) orders of magnitude have been recorded for the enhanced Raman bands in the SER(R)S spectra. Three-dimensional Finite Difference Time Domain (3D-FDTD) simulations studies have been carried out to predict the distributions of electric fields around the possible nanoaggregated hot geometries considered to be responsible for the huge enhancements of SER(R)S bands of the MB molecule.

19.
Spectrochim Acta A Mol Biomol Spectrosc ; 135: 935-46, 2015 Jan 25.
Article in English | MEDLINE | ID: mdl-25168230

ABSTRACT

The surface enhanced Raman scattering (SERS) spectra of biologically and industrially significant 5-methylthio-1, 3, 4-thiadiazole 2-thiol molecule have been investigated. The SERS spectra at various concentrations of the adsorbate are compared with the Fourier transform Infrared (FTIR) and normal Raman spectra (NRS) of the probe molecule recorded in different environmental conditions. The optimized molecular structures of the most probable thione and the thiol forms of the molecule have been estimated from the density functional theory (DFT) calculations. The vibrational signatures of the molecule have been assigned from the potential energy distributions (PEDs). The detail vibrational analyses reveal that ∼54% of the thione form of the molecule is prevalent in the solid state and its population increases to ∼65% in ACN solvent medium. Concentration dependent SERS, together with the 2-dimensional correlation spectra (2D-COS), corroborate the presence of both the thione and the thiol forms of the molecule even in the surface adsorbed state. The orientations of the thione and the thiol forms of the molecule on the nanocolloidal silver surface have been predicted from the surface selection rule. The selective enhancement of Raman bands in the SERS spectra have been explored from the view of the Albrecht's "A" and Herzberg-Teller (HT) charge transfer (CT) contribution.


Subject(s)
Colloids/chemistry , Models, Molecular , Nanoparticles/chemistry , Silver/chemistry , Spectrum Analysis, Raman , Sulfhydryl Compounds/analysis , Thiadiazoles/analysis , Adsorption , Electrons , Hydrogen-Ion Concentration , Molecular Conformation , Solvents/chemistry , Spectrophotometry, Ultraviolet , Spectroscopy, Fourier Transform Infrared , Temperature , Vibration
20.
Dalton Trans ; 43(3): 1032-47, 2014 Jan 21.
Article in English | MEDLINE | ID: mdl-24162190

ABSTRACT

Stable coinage metal nanoparticles (NPs) have been synthesized individually in an aqueous alkaline solution from the corresponding metal salts as precursors using the condensation product (CP) of salicylaldehyde and triethylenetetramine as a reagent. Silver and gold NPs are obtained with and without light illumination but UV irradiation is essential for Cu(0)NP formation. During nanoparticle formation the CP is oxidized to OCP which eventually becomes a fluorophore and also a stabilizer for the in situ produced NPs. It has been observed that silver and gold particle formation kinetics is accelerated by UV exposure. Thus the ease of evolution of coinage metal NP formation relates to their nobility. The as prepared OCP solutions containing coinage metals exhibit a fluorescence contrast behaviour (fluorescence enhancement by Cu and Ag; quenching by AuNP) due to the match and mismatch of wave vectors. The electric field evident from the FDTD simulation abreast of the scattering cross section of the NPs governed from Mie theory as a consequence of surface plasmon coupled emission (SPCE), near field electromagnetic intensity enhancement and lightening rod effect concentrating the electric field around the fluorophore are responsible for the Cu and AgNPs stimulated fluorescence. Again, lossy surface waves are anticipated for efficient quenching by the AuNPs. The most unprecedented observation is 'Turn On' fluorescence which is reported here as a result of the substitution of Au(0) or Cu(0) by Ag(0). Finally, the preferential fluorescence enhancement helps the selective detection of Ag(i) and Cu(ii) well below the US Environmental Protection Agency (EPA) permissible level by tuning the experimental conditions.

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