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1.
Genes Brain Behav ; 15(4): 405-19, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26915960

ABSTRACT

The dentate gyrus is one of the only two brain regions where adult neurogenesis occurs. Throughout life, cells of the neuronal stem cell niche undergo proliferation, differentiation and integration into the hippocampal neural circuitry. Ongoing adult neurogenesis is a prerequisite for the maintenance of adult hippocampal functionality. Bcl11b, a zinc finger transcription factor, is expressed by postmitotic granule cells in the developing as well as adult dentate gyrus. We previously showed a critical role of Bcl11b for hippocampal development. Whether Bcl11b is also required for adult hippocampal functions has not been investigated. Using a tetracycline-dependent inducible mouse model under the control of the forebrain-specific CaMKIIα promoter, we show here that the adult expression of Bcl11b is essential for survival, differentiation and functional integration of adult-born granule cell neurons. In addition, Bcl11b is required for survival of pre-existing mature neurons. Consequently, loss of Bcl11b expression selectively in the adult hippocampus results in impaired spatial working memory. Together, our data uncover for the first time a specific role of Bcl11b in adult hippocampal neurogenesis and function.


Subject(s)
Hippocampus/metabolism , Repressor Proteins/metabolism , Tumor Suppressor Proteins/metabolism , Age Factors , Animals , Cell Differentiation/physiology , Cell Proliferation/physiology , Dentate Gyrus/metabolism , Gene Expression , Hippocampus/anatomy & histology , Male , Memory Disorders/metabolism , Mice , Mice, Inbred C57BL , Neural Stem Cells/cytology , Neurogenesis/physiology , Neurons/metabolism , Structure-Activity Relationship
2.
Oncogene ; 35(18): 2311-21, 2016 05 05.
Article in English | MEDLINE | ID: mdl-26234679

ABSTRACT

The MDS1 and ecotropic viral integration site 1 (EVI1) complex locus (MECOM) gene encodes several transcription factor variants including MDS1-EVI1, EVI1 and EVI1Δ324. Although MDS1-EVI1 has been associated with tumor-suppressing activity, EVI1 is a known oncogene in various cancers, whose expression is associated with poor patient survival. Although EVI1Δ324 is co-transcribed with EVI1, its activity in cancer cells is not fully understood. Previous reports described that unlike EVI1, EVI1Δ324 protein cannot transform fibroblasts because of its disrupted N-terminal zinc finger (ZNF) domain. To better understand EVI1Δ324 biology and function, we obtained genome-wide binding occupancies and expression data in ovarian cancer cells. We characterized its DNA-binding sites, binding motif and target genes. Comparative analyses with previous study show that EVI1 and EVI1Δ324 share similar transcriptional activities linked to their common C-terminus ZNF domain. They bind to an E-twenty-six family (ETS)-like motif, target to a large extent the same genes and cooperate with AP1 transcription factor. EVI1Δ324-occupied genes were 70.7% similar to EVI1-bound genes. More strikingly, EVI1 and EVI1Δ324 differentially expressed genes were 99.87% identical, indicating comparable transcriptional regulatory functions. Consistently with gene ontologies linked to these target genes, EVI1Δ324 expression in HeLa cells could enhance anchorage-independent growth, such as EVI1, showing that EVI1Δ324 expression also lead to pro-oncogenic effects. The main specific feature of EVI1 variant is its N-terminus ZNF domain that binds DNA through GATA-like motif. We found that most GATA-like EVI1 chromatin immunoprecipitation sequencing peaks are far from genes and are not involved in transcriptional regulation. These genomic regions were enriched in simple sequence repeats and displayed high meiotic recombination rates. Overall, our genomics analyses uncovered common and specific features of two major MECOM isoforms. Their influence on transcription and downstream cell proliferation was comparable. However, EVI1-specific GATA-like binding sites, from its N-terminus ZNF domain, associated with high recombination rates, suggesting possible additional oncogenic potential for EVI1 in modulating genomic stability.


Subject(s)
Carcinogenesis/genetics , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Genomics , Proto-Oncogenes/genetics , Transcription Factors/genetics , Transcription Factors/metabolism , Transcription, Genetic , Base Sequence , Cell Line, Tumor , DNA-Binding Proteins/chemistry , Female , Genomic Instability , Humans , MDS1 and EVI1 Complex Locus Protein , Meiosis/genetics , Nucleotide Motifs , Ovarian Neoplasms/pathology , Protein Domains , Protein Isoforms/chemistry , Protein Isoforms/genetics , Protein Isoforms/metabolism , Recombination, Genetic , Transcription Factors/chemistry
3.
Curr Top Microbiol Immunol ; 321: 185-200, 2008.
Article in English | MEDLINE | ID: mdl-18727493

ABSTRACT

Itchy mice possess a loss-of-function mutation in a HECT-domain-containing ubiquitin ligase (E3), Itch. Homozygous itchy mice develop a systemic and progressive autoimmune disease that proves lethal beginning at 6 months of age. Numerous targets of Itch-mediated ubiquitination have been identified, and some of these have defined physiological roles for Itch signaling in Tcell anergy and T cell differentiation. Studies of itchy mice have also allowed for the identification of a novel pathway involved in autoimmunity: noncanonical Notch signaling. In itchy mice carrying an activated Notch1 transgene, there are increased amounts of full-length Notch1, which can complex with p56(lck) and PI3K to activate a cell survival signal that is mediated by phospho-AKT. This, in turn, leads to a reduction in apoptosis in the thymus and may have consequences in T cell tolerance. A role for noncanonical Notch signaling in autoimmune disease is also supported by numerous mouse knockout studies, and suggests possible new therapeutic approaches for the treatment of autoimmune disease.


Subject(s)
Autoimmune Diseases/etiology , Signal Transduction , Ubiquitin-Protein Ligases/physiology , Animals , Autoimmune Diseases/therapy , Mice , Mutation , Receptors, Notch/physiology , T-Lymphocytes/immunology , Ubiquitin/metabolism , Ubiquitin-Protein Ligases/genetics
4.
Cytogenet Genome Res ; 97(1-2): 120-7, 2002.
Article in English | MEDLINE | ID: mdl-12438750

ABSTRACT

The mouse UGRP gene family consists of two genes, Ugrp1 and Ugrp2. In this study, the genomic structure and expression patterns of Ugrp2 and its alternative spliced form were characterized. The authentic Ugrp2 gene has three exons and two introns, similar to the Ugrp1 gene, which produces a secreted protein. The Ugrp2 variant uses a sequence located between authentic exons 1 and 2, resulting in a cytoplasmic form due to a termination codon within the inserted sequence. Both mouse and human UGRP2 mRNAs are expressed in lung. In the case of human, the mRNA is expressed at the highest level in trachea, followed by salivary gland at a level similar to lung. Weak expression was also found in fetal lung and mammary gland. Ugrp2 was mapped by fluorescence in situ hybridization to mouse chromosome 11A5-B1 and human chromosome 5q35. These regions are known to be homologous. Interspecific mouse backcross mapping was also performed to obtain further detailed localization of mouse Ugrp1 and Ugrp2.


Subject(s)
Proteins/genetics , Alternative Splicing , Amino Acid Sequence , Animals , Base Sequence , Chromosome Mapping , Chromosomes, Human, Pair 5/genetics , Cloning, Molecular , DNA, Complementary/genetics , Female , Gene Expression , Humans , In Situ Hybridization, Fluorescence , Male , Mice , Mice, Inbred C57BL , Molecular Sequence Data , Multigene Family , Muridae , RNA, Messenger/genetics , RNA, Messenger/metabolism , Species Specificity
5.
Leukemia ; 16(9): 1827-34, 2002 Sep.
Article in English | MEDLINE | ID: mdl-12200699

ABSTRACT

We describe here the development of a murine system for the identification of genes involved in myelomonocytic neoplasms. Transgenic C57BL/6J mice expressing SV40 early region under a myelomonocytic promoter develop histiocytic sarcomas with a latency of 167 days. We used retroviral proviral tagging to accelerate tumorigenesis and to uncover genetic changes that contribute to tumor development. Infection of transgenic mice with Friend murine leukemia virus (F-MuLV) shortened the latency of morbidity to 103 days (P< 0.001); this was associated with clonal proviral integrations in tumor DNA. As expected for F-MuLV, proviral insertions occurred at Fli1 in both transgenic and nontransgenic tumors. Four insertions were found at a novel locus, termed Fim4, on chromosome 6. This region is syntenic to human 7q32, a region that is commonly deleted in human myelodysplastic syndrome and acute myeloid leukemia. A murine BAC containing Fim4 was sequenced and analyzed, and while there was significant human-mouse homology in the area of the insertions, no candidate gene has been identified. Thus we have established a system to identify genes involved in myelomonocytic tumors, and have used it to identify Fim4, a new common site of proviral insertion. Study of this locus may provide insight into genes involved in AML-associated 7q32 deletions in humans.


Subject(s)
Antigens, Polyomavirus Transforming/genetics , DNA-Binding Proteins/genetics , Friend murine leukemia virus/genetics , Leukemia, Myelomonocytic, Acute/virology , Proto-Oncogene Proteins , Trans-Activators/genetics , Tumor Virus Infections/virology , Virus Integration , Animals , Antigens, Polyomavirus Transforming/metabolism , Blotting, Southern , Chromosome Mapping , Chromosomes, Artificial, Bacterial , Cloning, Molecular , DNA Primers/chemistry , Humans , In Situ Hybridization, Fluorescence , Leukemia, Experimental/genetics , Leukemia, Experimental/metabolism , Leukemia, Experimental/virology , Leukemia, Myelomonocytic, Acute/genetics , Leukemia, Myelomonocytic, Acute/metabolism , Mice , Mice, Inbred C3H , Mice, Inbred C57BL , Mice, Transgenic , Polymerase Chain Reaction , Proto-Oncogene Protein c-fli-1 , Proviruses/genetics , Retroviridae Infections/genetics , Retroviridae Infections/virology , Tumor Virus Infections/genetics , Tumor Virus Infections/metabolism
6.
Mamm Genome ; 12(12): 882-6, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11707773

ABSTRACT

Common laboratory strains such as C57BL/6J carry a single Csf2ra gene that maps to the distal end of Chromosome (Chr) 19. Here we report that several species of wild mice contain multiple Csf2ra genes. Using interspecific backcross mapping and in situ hybridization, we demonstrate that one of these species, Mus spretus, carries four Csf2ra genes dispersed among the distal tips of Chrs 4, 10, 13, and 19. Our data further suggest that these additional Csf2ra genes are not generated by retrotransposition, but rather by nonhomologous subtelomeric exchanges that could be mediated in part by ribosomal genes located at the subtelomeric regions of Chrs 4, 13, and 19. Although we do not know whether these additional Csf2ra genes are functionally active, our studies suggest that subtelomeric exchange provides a potent means for rapid gene amplification in the mouse.


Subject(s)
Gene Amplification , Muridae/genetics , Receptors, Granulocyte-Macrophage Colony-Stimulating Factor/genetics , Recombination, Genetic , Telomere/genetics , Translocation, Genetic , Animals , Animals, Laboratory/genetics , Animals, Wild/genetics , Chromosome Mapping , Crosses, Genetic , Evolution, Molecular , Female , Genes , In Situ Hybridization , Male , Mice , Mice, Inbred C57BL , Species Specificity , Translocation, Genetic/genetics
7.
Development ; 128(16): 3105-15, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11688560

ABSTRACT

SALL1 is a mammalian homolog of the Drosophila region-specific homeotic gene spalt (sal); heterozygous mutations in SALL1 in humans lead to Townes-Brocks syndrome. We have isolated a mouse homolog of SALL1 (Sall1) and found that mice deficient in Sall1 die in the perinatal period and that kidney agenesis or severe dysgenesis are present. Sall1 is expressed in the metanephric mesenchyme surrounding ureteric bud; homozygous deletion of Sall1 results in an incomplete ureteric bud outgrowth, a failure of tubule formation in the mesenchyme and an apoptosis of the mesenchyme. This phenotype is likely to be primarily caused by the absence of the inductive signal from the ureter, as the Sall1-deficient mesenchyme is competent with respect to epithelial differentiation. Sall1 is therefore essential for ureteric bud invasion, the initial key step for metanephros development.


Subject(s)
Gene Expression Regulation, Developmental , Kidney/embryology , Transcription Factors/genetics , Transcription Factors/physiology , Ureter/embryology , Amino Acid Sequence , Animals , Cloning, Molecular , Crosses, Genetic , Down-Regulation , Genetic Markers/genetics , Heterozygote , Humans , In Situ Hybridization , Mesoderm/metabolism , Mice , Mice, Inbred C57BL , Models, Genetic , Molecular Sequence Data , Mutation , Phenotype , Polymerase Chain Reaction , Sequence Homology, Amino Acid
8.
Nat Rev Genet ; 2(10): 769-79, 2001 Oct.
Article in English | MEDLINE | ID: mdl-11584293

ABSTRACT

Highly efficient phage-based Escherichia coli homologous recombination systems have recently been developed that enable genomic DNA in bacterial artificial chromosomes to be modified and subcloned, without the need for restriction enzymes or DNA ligases. This new form of chromosome engineering, termed recombinogenic engineering or recombineering, is efficient and greatly decreases the time it takes to create transgenic mouse models by traditional means. Recombineering also facilitates many kinds of genomic experiment that have otherwise been difficult to carry out, and should enhance functional genomic studies by providing better mouse models and a more refined genetic analysis of the mouse genome.


Subject(s)
DNA-Binding Proteins , Escherichia coli Proteins , Genetic Engineering/methods , Genomics/methods , Mice/genetics , Recombination, Genetic , Animals , Bacterial Proteins/physiology , Bacteriophage P1/genetics , Bacteriophage lambda/genetics , Chromosomes, Artificial, Bacterial/genetics , Chromosomes, Artificial, P1 Bacteriophage/genetics , Chromosomes, Artificial, Yeast/genetics , Cloning, Molecular/methods , DNA Repair , DNA, Bacterial/genetics , DNA, Fungal/genetics , DNA, Recombinant/genetics , DNA, Single-Stranded/genetics , Escherichia coli/genetics , Exodeoxyribonuclease V , Exodeoxyribonucleases/physiology , Forecasting , Gene Expression Regulation, Viral , Mice, Knockout , Mice, Transgenic , Rec A Recombinases/metabolism , Regulatory Sequences, Nucleic Acid , Saccharomyces cerevisiae/genetics , Sequence Homology, Nucleic Acid , Transgenes , Viral Proteins/physiology
9.
Mamm Genome ; 12(9): 741-9, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11641724

ABSTRACT

The Perilipins are a family of intracellular neutral lipid droplet storage proteins that are responsive to acute protein kinase A-mediated, hormonal stimulation. Perilipin (Peri) expression appears to be limited to adipocytes and steroidogenic cells, in which intracellular neutral lipid hydrolysis is regulated by protein kinase A. We have isolated cDNA sets and overlapping genomic fragments of the murine Peri locus and mapped chromosomal location, transcription start sites, polyadenylylation sites, and intron/exon junctions. Data confirm that the Perilipins are encoded by a single-copy gene, with alternative and tissue-specific, mRNA splicing and polyadenylylation yielding four different protein species. The Perilipin proteins have identical approximately 22-kDa amino termini with distinct carboxyl terminal sequences of varying lengths. These genomic and transcriptional maps of murine Perilipin are also essential for evaluating presumptive endogenous and targeted mutations within the locus. The N-terminal identity region of the Perilipins defines a sequence motif, which we term PAT, that is shared with the ADRP and TIP47 proteins; additionally, the PAT domain may represent a novel, conserved pattern for lipid storage droplet (LSD) proteins of vertebrates and invertebrates alike. Comparative genomics suggest the presence of related LSD genes in species as diverse as Drosophila and Dictyostelium.


Subject(s)
Alternative Splicing/genetics , Phosphoproteins/genetics , RNA, Messenger/genetics , 5' Untranslated Regions/genetics , Amino Acid Sequence , Animals , Base Sequence , Carrier Proteins , DNA Primers/chemistry , DNA, Complementary/isolation & purification , DNA, Complementary/metabolism , Dictyostelium/genetics , Drosophila/genetics , Mice , Mice, Inbred C57BL , Molecular Sequence Data , Perilipin-1 , Polyadenylation , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Sequence Homology, Amino Acid
10.
Immunogenetics ; 53(6): 477-82, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11685458

ABSTRACT

Three differentially expressed selectin genes (SELE, SELP, and SELL), important in the initial stages of leukocyte extravasation, have been reported in mammals. All three genes map close to the chemokine SCYC1 (small inducible cytokine subfamily C, member 1) in a large conserved chromosomal segment that extends from RXRG (retinoic acid receptor, gamma) to TNNT2 (troponin T2) on Chromosome (Chr) 1 in both human and mouse. In the mouse, we demonstrate that Sele is flanked by Prrx1 (paired-related homeobox gene 1) and Scyc1 and define the order of, and distances between, loci as centromere-Prrx1-(0.7+/-0.7 cM)-Sele-(1.2+/-0.9 cM)-Scyc1-telomere. In the chicken, we isolated BAC clones containing PRRX1, SELE, and SCYC1 and positioned them by fluorescent in situ hybridization. SELE and PRRX1 mapped to the short arm of chicken Chr 8 and SCYC1 mapped to the region equivalent to 1q11-1q13 on the long arm of chicken Chr 1. The location of SELE on chicken Chr 8 was independently established by linkage analysis of COM0185, an (AT)16 microsatellite locus identified in a BAC clone that contained SELE. COM0185 was linked to several loci that mapped to one end of chicken Chr 8, with the order of loci, and genetic distances (in cM) between them defined as MSU0435, MSU0325-(7.8+/-3.7)-COM0185-(5.8+/-3.2)-ROS0338-(9.6+/-4.0)-ABR0322-(3.8+/-2.6)-GLUL. We have therefore positioned an evolutionary breakpoint in mammals and chickens between SELE and SCYC1. Furthermore, comparative mapping analysis of the RXRG-TNNT2 chromosomal segment that is conserved on human and mouse Chr 1 indicates that it is divided into four segments in the chicken, each of which maps to a different chromosome.


Subject(s)
Chemokines, C , Chickens/genetics , Chromosomes , E-Selectin/genetics , Lymphokines/genetics , Sialoglycoproteins/genetics , Animals , Chromosome Mapping , Conserved Sequence , Evolution, Molecular , Expressed Sequence Tags , Genes , Genes, Homeobox , Genetic Linkage , Humans , In Situ Hybridization, Fluorescence , Mice
11.
J Biol Chem ; 276(50): 47489-95, 2001 Dec 14.
Article in English | MEDLINE | ID: mdl-11591709

ABSTRACT

Two classes of cysteinyl leukotriene receptor, CysLT(1) and CysLT(2), have been identified and pharmacologically characterized in human tissues. Although the CysLT(1) receptor mediates the proinflammatory effects of leukotrienes in human asthma, the physiological roles of CysLT(2) receptor are not defined, and a suitable mouse model would be useful in delineating function. We report here the molecular cloning and characterization of the mouse CysLT(2) receptor (mCysLT(2)R) from heart tissue. mCysLT(2)R cDNA encodes a protein of 309 amino acids, truncated at both ends compared with the human ortholog (hCysLT(2)R). The gene resides on the central region of mouse chromosome 14 and is composed of 6 exons with the entire coding region located in the last exon. Two 5'-untranslated region splice variants were identified with the short form lacking exon 3 as the predominant transcript. Although the overall expression of mCysLT(2)R is very low, the highest expression was detected in spleen, thymus, and adrenal gland by ribonuclease protection assay, and discrete sites of expression in heart were observed by in situ hybridization. Intracellular calcium mobilization in response to cysteinyl leukotriene administration was detected in human embryonic kidney 293T cells transfected with recombinant mCysLT(2)R with a rank order of potency leukotriene C(4)(LTC(4) ) = LTD(4)>>LTE(4). [(3)H]LTD(4) binding to membranes expressing mCysLT(2)R could be effectively competed by LTC(4) and LTD(4) and only partially inhibited by LTE(4) and BAYu9773. The identification of mCysLT(2)R will be useful for establishing CysLT(2)R-deficient mice and determining novel leukotriene functions.


Subject(s)
Alternative Splicing , DNA, Complementary/metabolism , Membrane Proteins , Receptors, Leukotriene/chemistry , Receptors, Leukotriene/genetics , 5' Untranslated Regions , Adrenal Glands/metabolism , Amino Acid Sequence , Animals , Base Sequence , Binding, Competitive , Blotting, Northern , Calcium/metabolism , Cell Line , Cells, Cultured , Chromosome Mapping , Cloning, Molecular , Crosses, Genetic , Dose-Response Relationship, Drug , Exons , Humans , In Situ Hybridization , Introns , Leukotriene C4/metabolism , Leukotriene D4/metabolism , Mice , Mice, Inbred C57BL , Models, Genetic , Molecular Sequence Data , Myocardium/metabolism , Protein Structure, Tertiary , RNA, Messenger/metabolism , Radioligand Assay , Recombinant Proteins/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sequence Homology, Amino Acid , Spleen/metabolism , Thymus Gland/metabolism , Tissue Distribution , Transfection
12.
J Cell Sci ; 114(Pt 18): 3297-307, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11591818

ABSTRACT

LAP2beta is an integral membrane protein of the nuclear envelope involved in chromatin and nuclear architecture. Using the yeast two-hybrid system, we have cloned a novel LAP2beta-binding protein, mGCL, which contains a BTB/POZ domain and is the mouse homologue of the Drosophila germ-cell-less (GCL) protein. In Drosophila embryos, GCL was shown to be essential for germ cell formation and was localized to the nuclear envelope. Here, we show that, in mammalian cells, GCL is co-localized with LAP2beta to the nuclear envelope. Nuclear fractionation studies reveal that mGCL acts as a nuclear matrix component and not as an integral protein of the nuclear envelope. Recently, mGCL was found to interact with the DP3alpha component of the E2F transcription factor. This interaction reduced the transcriptional activity of the E2F-DP heterodimer, probably by anchoring the complex to the nuclear envelope. We demonstrate here that LAP2beta is also capable of reducing the transcriptional activity of the E2F-DP complex and that it is more potent than mGCL in doing so. Co-expression of both LAP2beta and mGCL with the E2F-DP complex resulted in a reduced transcriptional activity equal to that exerted by the pRb protein.


Subject(s)
Cell Cycle Proteins , DNA-Binding Proteins/metabolism , Drosophila Proteins , Membrane Proteins/metabolism , Nuclear Envelope/metabolism , Nuclear Proteins/metabolism , Transcription Factors/metabolism , Amino Acid Sequence , Animals , Carcinoma, Non-Small-Cell Lung/metabolism , Carrier Proteins/physiology , Chromosomes/chemistry , DNA-Binding Proteins/chemistry , Drosophila , E2F Transcription Factors , Humans , Insulinoma/metabolism , Intercellular Signaling Peptides and Proteins , Lung Neoplasms , Macromolecular Substances , Membrane Proteins/chemistry , Mice , Molecular Sequence Data , Nuclear Envelope/chemistry , Nuclear Proteins/genetics , Nuclear Proteins/isolation & purification , Pancreas/cytology , Pancreas/metabolism , Protein Transport/physiology , Saccharomyces cerevisiae , Sequence Homology , Transcription, Genetic/physiology , Tumor Cells, Cultured/metabolism
13.
J Virol ; 75(19): 9427-34, 2001 Oct.
Article in English | MEDLINE | ID: mdl-11533205

ABSTRACT

Juvenile myelomonocytic leukemia (JMML) is a disease that occurs in young children and is associated with a high mortality rate. In most patients, JMML has a progressive course leading to death by virtue of infection, bleeding, or progression to acute myeloid leukemia (AML). As it is known that children with neurofibromatosis type 1 syndrome have a markedly increased risk of developing JMML, we have previously developed a mouse model of JMML through reconstitution of lethally irradiated mice with hematopoietic stem cells homozygous for a loss-of-function mutation in the Nf1 gene (D. L. Largaespada, C. I. Brannan, N. A. Jenkins, and N. G. Copeland, Nat. Genet. 12:137-143, 1996). In the course of these experiments, we found that all these genetically identical reconstituted mice developed a JMML-like disorder, but only a subset went on to develop more acute disease. This result strongly suggests that additional genetic lesions are responsible for disease progression to AML. Here, we describe the production of a unique tumor panel, created using the BXH-2 genetic background, for identification of these additional genetic lesions. Using this tumor panel, we have identified a locus, Epi1, which maps 30 to 40 kb downstream of the Myb gene and appears to be the most common site of somatic viral integration in BXH-2 mice. Our findings suggest that proviral integrations at Epi1 cooperate with loss of Nf1 to cause AML.


Subject(s)
Leukemia, Experimental/genetics , Leukemia, Myeloid/genetics , Acute Disease , Animals , Gene Deletion , Genes, Neurofibromatosis 1 , Genes, myb , Genetic Predisposition to Disease , Leukemia, Experimental/etiology , Leukemia, Experimental/virology , Leukemia, Myeloid/etiology , Leukemia, Myeloid/virology , Mice , Retroviridae/genetics , Virus Integration/genetics
14.
Genomics ; 77(1-2): 2-4, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11543625

ABSTRACT

We determined the chromosomal location of the mouse gene Stk25, encoding a member of the Ste20/PAK family of serine/threonine kinases, by interspecific backcross analysis. We mapped Stk25 to the central region of mouse chromosome 1 linked to Chrng (formerly Acrg) and En1. This central region of mouse chromosome 1 shares a region of homology with the long arm of human chromosome 2, suggesting that the human homologue of Stk25 would also map to 2q. We proved this prediction of syntenic homology correct by mapping human STK25 to 2q37. Deletion of the 2q37 region has been implicated in the expression of pseudopseudohypoparathyroidism (PPHP), a disease which shares features of the Albright hereditary osteodystrophy (AHO) phenotype. To investigate a pathogenetic relationship between STK25 and PPHP, we carried out fluorescence in situ hybridization (FISH) using an STK25 gene probe and chromosomes from PPHP patients characterized as having small deletions near the distal end of 2q. PPHP patient DNA showed no hybridization to STK25 genomic DNA, indicating that STK25 is contained within the deleted chromosomal region. This finding, in conjunction with previous studies demonstrating the role of Ste20/PAK kinases in heterotrimeric G protein signaling, suggests that STK25 is a positional candidate gene for PPHP.


Subject(s)
Protein Serine-Threonine Kinases/genetics , Pseudopseudohypoparathyroidism/genetics , Saccharomyces cerevisiae Proteins , Animals , Chromosome Deletion , Chromosome Mapping , Chromosomes, Human, Pair 2/genetics , Female , Genetic Predisposition to Disease/genetics , Humans , In Situ Hybridization, Fluorescence , Intracellular Signaling Peptides and Proteins , MAP Kinase Kinase Kinases , Male , Mice , Mice, Inbred C57BL , Molecular Sequence Data , Muridae , Pseudopseudohypoparathyroidism/enzymology
15.
J Biol Chem ; 276(42): 38795-807, 2001 Oct 19.
Article in English | MEDLINE | ID: mdl-11489895

ABSTRACT

Human tumor endothelial marker 1/endosialin (TEM1/endosialin) was recently identified as a novel tumor endothelial cell surface marker potentially involved in angiogenesis, although no specific function for this novel gene has been assigned so far. It was reported to be expressed in tumor endothelium but not in normal endothelium with the exception of perhaps the corpus luteum. Here we describe the cDNA and genomic sequences for the mouse Tem1/endosialin homolog, the identification and characterization of its promoter region, and an extensive characterization of its expression pattern in murine and human tissues and murine cell lines in vitro. The single copy gene that was mapped to chromosome 19 is intronless and encodes a 92-kDa protein that has 77.5% overall homology to the human protein. The remarkable findings are 1) this gene is ubiquitously expressed in normal human and mouse somatic tissues and during development, and 2) its expression at the mRNA level is density-dependent and up-regulated in serum-starved cells. In vitro, its expression is limited to cells of embryonic, endothelial, and preadipocyte origin, suggesting that the wide distribution of its expression in vivo is due to the presence of vascular endothelial cells in all the tissues. The ubiquitous expression in vivo is in contrast to previously reported expression limited to corpus luteum and highly angiogenic tissues such as tumors and wound tissue.


Subject(s)
Membrane Proteins/biosynthesis , Membrane Proteins/genetics , Neoplasm Proteins/biosynthesis , Neoplasm Proteins/genetics , 3T3 Cells , Amino Acid Sequence , Animals , Antigens, CD , Antigens, Neoplasm , Base Sequence , Blotting, Northern , Blotting, Southern , Blotting, Western , Cell Division , Cell Line , Cells, Cultured , Chromosome Mapping , Chromosomes, Human, Pair 19 , Corpus Luteum/metabolism , Crosses, Genetic , DNA, Complementary/metabolism , Endothelium, Vascular/cytology , Female , Gene Library , Humans , Immunohistochemistry , In Situ Hybridization , Introns , Luciferases/metabolism , Mice , Mice, Inbred C57BL , Microscopy, Confocal , Microscopy, Fluorescence , Models, Genetic , Molecular Sequence Data , Promoter Regions, Genetic , Protein Binding , Reverse Transcriptase Polymerase Chain Reaction , Tissue Distribution , Transcription, Genetic , Up-Regulation
16.
Biochem Biophys Res Commun ; 285(5): 1369-76, 2001 Aug 03.
Article in English | MEDLINE | ID: mdl-11478809

ABSTRACT

Paralemmin is a protein implicated in plasma membrane dynamics. Here we describe the identification of two new paralemmin-related proteins. A partial paralemmin homolog, palmdelphin, is predominantly cytosolic, unlike paralemmin which is lipid-anchored to the plasma membrane through a C-terminal CaaX motif. We have mapped the mouse palmdelphin gene to distal chromosome 3 between Amy2 and Abcd3, in a region homologous to human chromosome 1p22-p21 where the human palmdelphin gene is located. We have also identified a second paralemmin isoform, paralemmin-2. It is expressed from a gene on human chromosome 9q31-q33 which ends only 33 kb upstream of the gene encoding the protein kinase A-binding protein,AKAP2/AKAP-KL. The closely adjacent paralemmin-2 and AKAP2 genes are functionally linked in a very unusual manner. Chimeric mRNAs are expressed, apparently by RNA readthrough and differential splicing, that encode natural fusion proteins in which either the N-terminal coiled-coil region or nearly the complete sequence of paralemmin-2 except its C-terminal CaaX motif is fused to AKAP2/AKAP-KL. The N-terminal coiled-coil region is conserved in paralemmin-1, paralemmin-2/AKAP2, palmdelphin and a fourth, uncharacterized gene, suggesting that it is a modular functional domain.


Subject(s)
Adaptor Proteins, Signal Transducing , Carrier Proteins/genetics , Membrane Proteins/genetics , Multigene Family , Proteins/genetics , A Kinase Anchor Proteins , Alternative Splicing , Animals , Chickens , Chromosomes, Human, Pair 1/genetics , Chromosomes, Human, Pair 9/genetics , Cytosol/metabolism , DNA, Complementary/genetics , DNA, Complementary/isolation & purification , Humans , Membrane Proteins/metabolism , Mice , Molecular Sequence Data , Organ Specificity , Phosphoproteins , Physical Chromosome Mapping , Protein Biosynthesis , Protein Isoforms/genetics , Protein Isoforms/metabolism , Protein Structure, Tertiary , Proteins/metabolism , RNA, Messenger/analysis , RNA, Messenger/biosynthesis , Rats , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/genetics , Sequence Alignment , Sequence Homology, Amino Acid , Terminology as Topic
17.
Proc Natl Acad Sci U S A ; 98(18): 10238-43, 2001 Aug 28.
Article in English | MEDLINE | ID: mdl-11504925

ABSTRACT

The d, ash, and ln coat color mutations provide a unique model system for the study of vesicle transport in mammals. All three mutant loci encode genes that are required for the polarized transport of melanosomes, the specialized, pigment-containing organelles of melanocytes, to the neighboring keratinocytes and eventually into coat hairs. Genetic studies suggest that these genes function in the same or overlapping pathways and are supported by biochemical studies showing that d encodes an actin-based melanosome transport motor, MyoVa, whereas ash encodes Rab27a, a protein that localizes to the melanosome and is postulated to serve as the MyoVa receptor. Here we show that ln encodes melanophilin (Mlph), a previously undescribed protein with homology to Rab effectors such as granuphilin, Slp3-a, and rabphilin-3A. Like all of these effectors, Mlph possesses two Zn(2+)-binding CX(2)CX(13,14)CX(2)C motifs and a short aromatic-rich amino acid region that is critical for Rab binding. However, Mlph does not contain the two Ca(2+)-binding C(2) domains found in these and other proteins involved in vesicle transport, suggesting that it represents a previously unrecognized class of Rab effectors. Collectively, our data show that Mlph is a critical component of the melanosome transport machinery and suggest that Mlph might function as part of a transport complex with Rab27a and MyoVa.


Subject(s)
Carrier Proteins/genetics , Melanosomes/metabolism , Mutation , Pigmentation Disorders/genetics , rab GTP-Binding Proteins/genetics , Adaptor Proteins, Signal Transducing , Amino Acid Sequence , Animals , Base Sequence , Chromosome Mapping , Chromosomes, Artificial, Bacterial/genetics , DNA Primers/genetics , Genetic Complementation Test , Mice , Mice, Inbred C57BL , Mice, Mutant Strains , Molecular Sequence Data , Multigene Family , Sequence Homology, Amino Acid , rab27 GTP-Binding Proteins
18.
Exp Hematol ; 29(7): 856-63, 2001 Jul.
Article in English | MEDLINE | ID: mdl-11438208

ABSTRACT

OBJECTIVE: The homeobox gene Hoxb8 is activated in the murine myelomonocytic cell line WEHI-3B as a result of intracisternal A particle integration. Cooperative activation between Hoxa9 and Meis1 is induced by retroviral integration in BXH2 murine myeloid leukemias and the myeloid leukemia cell line M1. The present study was conducted to examine possible Meis gene activation and cooperative DNA binding of homeobox proteins in WEHI-3B and to reveal the specific role of Hox and Meis genes in myeloid differentiation. MATERIALS AND METHODS: Northern blot analysis and reverse transcriptase polymerase chain reaction were performed to examine homeobox genes expression. Electrophoretic mobility shift assay was performed to evaluate DNA binding of homeobox proteins. Myeloid differentiation of 32Dcl3 was induced by granulocyte colony-stimulating factor. RESULTS: Meis2 was coactivated with Hoxb8 in WEHI-3B cells. DNA-protein complexes including Hox, Meis, and Pbx were observed in WEHI-3B and 32Dcl3. Expression and the DNA-binding complex of Hoxa9, Hoxb8, Meis1, and Meis2 were down-regulated during myeloid differentiation of 32Dcl3 cells. Enforced expression of Hox or Meis genes inhibited myeloid differentiation of 32Dcl3. CONCLUSION: The results indicate that Meis2 is an important Meis gene for myeloid leukemogenesis and that Hox and Meis are important genes for myeloid leukemogenesis through differentiation block.


Subject(s)
Homeodomain Proteins/genetics , Leukopoiesis/genetics , Animals , Cell Differentiation/genetics , Cell Line , Gene Expression Regulation , Mice , Transcriptional Activation
19.
Cytogenet Cell Genet ; 92(3-4): 333-6, 2001.
Article in English | MEDLINE | ID: mdl-11435708

ABSTRACT

P2X(1) receptors are ATP-gated cation channels that mediate the fast, purinergic component of sympathetic nerve-smooth muscle neurotransmission in the mouse vas deferens and may serve comparable functions in the urinary bladder and the arteries. The gene for mouse P2X(1) (P2rx1) was cloned and its genomic structure defined by sequencing. The gene spans about 10 kb and consists of 12 exons. All splice sites conformed to the GT-AG motif and the exon-intron boundaries were largely conserved with other members of the P2X gene family so far cloned. A single transcription-starting site was identified by 5' RACE analysis, 233 bp upstream of the translation start site. The P2X(1) gene maps to the central region of mouse chromosome 11.


Subject(s)
Chromosome Mapping , Receptors, Purinergic P2/genetics , Animals , Base Sequence , Cloning, Molecular , Conserved Sequence/genetics , Crosses, Genetic , Exons/genetics , Female , Introns/genetics , Lod Score , Male , Mice , Mice, Inbred C57BL , RNA Splice Sites/genetics , RNA, Messenger/analysis , RNA, Messenger/genetics , Receptors, Purinergic P2X
20.
Biochem Biophys Res Commun ; 284(4): 1039-47, 2001 Jun 22.
Article in English | MEDLINE | ID: mdl-11409899

ABSTRACT

The Shc gene family is an emerging family, containing at least three members designated Shc/ShcA, Sck/Sli/ShcB, N-Shc/Rai/ShcC in mammals. In this study, we determined the genomic organization of the mouse Shc family. Coding regions of ShcA, B, and C each comprised 12 exons, spanned approximately 6, 20, and 65 kb, and located on chromosome 3, 10, and 13, respectively. Based on this genome analysis, we determined the full-length structure of mouse Sck/ShcB as a 68-kD protein. We found that the 68-kD full-length Sck/ShcB was more efficiently phosphorylated upon EGF treatment than the previously-analyzed CH2-deleted form. We also found that Sck specifically interacted with a 135-kD phosphoprotein (pp135) through its SH2 domain following membrane depolarization. The Sck-pp135 interaction was reduced by Src kinase inhibitors. These results suggest that Sck, but not N-Shc nor Shc, transmit signals in conjunction with pp135 following Src activation and/or calcium entry in the cell.


Subject(s)
Adaptor Proteins, Signal Transducing , Chromosome Mapping , Nerve Tissue Proteins/genetics , Neuropeptides , Proteins/genetics , Amino Acid Sequence , Animals , Base Sequence , Cell Line , Cloning, Molecular , Crosses, Genetic , Exons , Female , Humans , Male , Mice , Mice, Inbred C57BL , Molecular Sequence Data , Multigene Family , Muridae , Nerve Tissue Proteins/chemistry , Nerve Tissue Proteins/metabolism , Phosphotyrosine/metabolism , Proteins/chemistry , Proteins/metabolism , Rats , Recombinant Proteins/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sequence Alignment , Sequence Deletion , Sequence Homology, Amino Acid , Shc Signaling Adaptor Proteins , Src Homology 2 Domain-Containing, Transforming Protein 1 , Src Homology 2 Domain-Containing, Transforming Protein 2 , Src Homology 2 Domain-Containing, Transforming Protein 3 , Transfection , src Homology Domains
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