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1.
Science ; 366(6464): 480-485, 2019 10 25.
Article in English | MEDLINE | ID: mdl-31649197

ABSTRACT

Soil organisms, including earthworms, are a key component of terrestrial ecosystems. However, little is known about their diversity, their distribution, and the threats affecting them. We compiled a global dataset of sampled earthworm communities from 6928 sites in 57 countries as a basis for predicting patterns in earthworm diversity, abundance, and biomass. We found that local species richness and abundance typically peaked at higher latitudes, displaying patterns opposite to those observed in aboveground organisms. However, high species dissimilarity across tropical locations may cause diversity across the entirety of the tropics to be higher than elsewhere. Climate variables were found to be more important in shaping earthworm communities than soil properties or habitat cover. These findings suggest that climate change may have serious implications for earthworm communities and for the functions they provide.


Subject(s)
Biodiversity , Oligochaeta , Animal Distribution , Animals , Biomass , Climate , Earth, Planet , Ecosystem , Linear Models , Models, Biological , Soil
2.
Front Microbiol ; 10: 1274, 2019.
Article in English | MEDLINE | ID: mdl-31231351

ABSTRACT

The soil food web is often described as having three main energy channels: root, bacterial and fungal. Here we provide quantitative data using a sensitive stable isotope ratio mass spectrometry procedure with microcosms on species interactions in the fungal pathway. We measured 15N and 13C enrichment in microarthropods through grazing rare isotope enriched fungal mycelia. Experimental treatments were various combinations of 1, 2, 3, 4 microarthropods species. We used three fungivores (the collembolan Lepidocyrtus curvicollis, the Astigmata Tyrophagus putrescentiae, the Oribatida Oribatula tibialis), and the Mesostigmata predator Hypoaspis acquilifer. We collected individuals of each species separately, as well as their feces, and molt where available. All three fungivorous microarthropods consumed significantly more than their own body weight per day. The three fungivores differed in their consumption of the mycelium as it was not equally palatable to each. The Mesostigmata predator Hypoaspis also differed in its microarthropod prey preference. In multiple species combinations microarthropod behavioral interactions modified consumption and predation rates. Our selection of mites of different sizes, with varied preference for the mycelium, combined with differing predation rates on each mite, demonstrate that even three trophic level interactions with only five interacting species are not predictably simple. The interpretation of the stable isotope results and consumed-excreted weights indicate that: (a) behavior and microscopic observations should not be ignored in competition-predation interactions, and (b) functional guilds can take advantage of more diverse food opportunities. The reality of mixed diets complicates functional guild assignments that are reflected in 15N and 13C isotope levels at natural abundances in the environment. Microcosm experiments with this sensitive technique can help decipher the interpretation of rare isotope natural abundance values, as well as providing measured consumption, growth, and excretion rate values for modeling soil food web interactions.

3.
PLoS One ; 9(5): e97516, 2014.
Article in English | MEDLINE | ID: mdl-24830777

ABSTRACT

Alternative forages can be used to provide valuable home-grown feed for ruminant livestock. Utilising these different forages could affect the manure value and the implications of incorporating these forages into farming systems, needs to be better understood. An experiment tested the hypothesis that applying slurries from ruminants, fed ensiled red clover (Trifolium pratense), lucerne (Medicago sativa) or kale (Brassica oleracea) would improve the yield of hybrid ryegrass (Lolium hybridicum), compared with applying slurries from ruminants fed ensiled hybrid ryegrass, or applying inorganic N alone. Slurries from sheep offered one of four silages were applied to ryegrass plots (at 35 t ha⁻¹) with 100 kg N ha⁻¹ inorganic fertiliser; dry matter (DM) yield was compared to plots only receiving ammonium nitrate at rates of 0, 100 and 250 kg N ha⁻¹ year-1. The DM yield of plots treated with 250 kg N, lucerne or red clover slurry was significantly higher than other treatments (P<0.001). The estimated relative fertiliser N equivalence (FNE) (fertiliser-N needed to produce same yield as slurry N), was greatest for lucerne (114 kg) >red clover (81 kg) >kale (44 kg) >ryegrass (26 kg ha⁻¹ yr⁻¹). These FNE values represent relative efficiencies of 22% (ryegrass), 52% (kale), 47% (red clover) and 60% for lucerne slurry, with the ryegrass slurry efficiency being lowest (P = 0.005). Soil magnesium levels in plots treated with legume slurry were higher than other treatments (P<0.001). Overall, slurries from ruminants fed alternative ensiled forages increased soil nutrient status, forage productivity and better N efficiency than slurries from ruminants fed ryegrass silage. The efficiency of fertiliser use is one of the major factors influencing the sustainability of farming systems, these findings highlight the cascade in benefits from feeding ruminants alternative forages, and the need to ensure their value is effectively captured to reduce environmental risks.


Subject(s)
Animal Nutritional Physiological Phenomena , Lolium , Silage/analysis , Trifolium , Agriculture , Animal Husbandry , Animals , Brassica , Environment , Fertilizers , Medicago sativa , Nitrates/chemistry , Nitrogen/chemistry , Ruminants , Sheep , Soil
4.
Ecol Evol ; 4(1): 1-13, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24455156

ABSTRACT

Understanding trophic linkages within the soil food web (SFW) is hampered by its opacity, diversity, and limited niche adaptation. We need to expand our insight between the feeding guilds of fauna and not just count biodiversity. The soil fauna drive nutrient cycling and play a pivotal, but little understood role within both the carbon (C) and nitrogen (N) cycles that may be ecosystem dependent. Here, we define the structure of the SFW in two habitats (grassland and woodland) on the same soil type and test the hypothesis that land management would alter the SFW in these habitats. To do this, we census the community structure and use stable isotope analysis to establish the pathway of C and N through each trophic level within the ecosystems. Stable isotope ratios of C and N from all invertebrates were used as a proxy for trophic niche, and community-wide metrics were obtained. Our empirically derived C/N ratios differed from those previously reported, diverging from model predictions of global C and N cycling, which was unexpected. An assessment of the relative response of the different functional groups to the change from agricultural grassland to woodland was performed. This showed that abundance of herbivores, microbivores, and micropredators were stimulated, while omnivores and macropredators were inhibited in the grassland. Differences between stable isotope ratios and community-wide metrics, highlighted habitats with similar taxa had different SFWs, using different basal resources, either driven by root or litter derived resources. Overall, we conclude that plant type can act as a top-down driver of community functioning and that differing land management can impact on the whole SFW.

5.
J Eukaryot Microbiol ; 59(6): 520-6, 2012.
Article in English | MEDLINE | ID: mdl-22299758

ABSTRACT

The soil is probably the most diverse habitat there is, with organisms ranging in sizes from less than 1 µm to several metres in length. However, it is increasingly evident that we know little about the interactions occurring between these organisms, the functions that they perform as individual species, or together within their different feeding guilds. These interactions between groups of organisms and physical and chemical processes shape the soil as a habitat and influence the nature of the soil food web with consequences for the above-ground vegetation and food web. Protists are known as one of the most abundant groups of bacterivores within the soil; however, they are also consumers of a number of other food sources. Even though they are responsible for a large proportion of the mineralisation of bacterial biomass and have a large impact on the C and N cycles within the soil they are regularly overlooked when investigating the complete soil food web. Recently, stable isotopes have been used to determine trophic interactions and here we describe how this technique has been used to highlight linkages between protists and the soil food web.


Subject(s)
Food Chain , Isotopes/metabolism , Soil/analysis , Soil/parasitology , Isotope Labeling/methods
6.
Microb Ecol ; 63(4): 905-18, 2012 May.
Article in English | MEDLINE | ID: mdl-21990016

ABSTRACT

Protozoa are one of the most abundant groups of bacterivores within the soil and are responsible for mineralisation of bacterial biomass, having a large impact on C and N cycling. Little is known of their contribution to soil nutrient transfers or the identity of their consumers. Here, for the first time indigenous flagellates and ciliates, enriched to 83 atom% for (13)C and 10 atom% for (15)N, were introduced to soil cores from two different land managements, grassland and woodland with the same soil type, to trace the flow of protozoan C and N through the soil food web. Nematodes, Collembola, earthworms and insect larvae obtained the greatest amounts of C and N of protozoan origin, either through direct consumption or uptake of biomass post-cell death. Our results show that changes in management, affect the functioning of the soil food web and the utilisation of protozoa as a food source.


Subject(s)
Ciliophora/physiology , Eukaryota/physiology , Food Chain , Insecta/physiology , Nematoda/physiology , Soil/parasitology , Animals , Arthropods/physiology , Ecosystem , Oligochaeta/physiology
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