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1.
Pediatr Blood Cancer ; 71(3): e30779, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38073018

ABSTRACT

BACKGROUND AND OBJECTIVES: Kaposiform hemangioendothelioma (KHE) and tufted angioma (TA) are rare vascular tumors in children historically associated with significant morbidity and mortality. This study was conducted to determine first-line therapy in the absence of available prospective clinical trials. METHODS: Patients from 17 institutions diagnosed with KHE/TA between 2005 and 2020 with more than 6 months of follow-up were included. Response rates to sirolimus and vincristine were compared at 3 and 6 months. Durability of response and response to other treatment modalities were also evaluated. RESULTS: Of 159 unique KHE/TA subjects, Kasabach-Merritt phenomenon (KMP) was present in 64 (40.3%), and only two patients were deceased (1.3%). Over 60% (n = 96) demonstrated treatment response at 3 months, and more than 70% (n = 114) by 6 months (no significant difference across groups). The vincristine group had higher radiologic response at 3 months compared to sirolimus (72.7% vs. 20%, p = .03), but there were no differences between these groups at 6 months. There were no differences in rates of recurrent or progressive disease between vincristine and sirolimus. CONCLUSIONS: In this large, multicenter cohort of 159 patients with KHE/TA, rates of KMP were consistent with historical literature, but the mortality rate (1.3%) was much lower. Overall treatment response rates were high (>70%), and there was no significant difference in treatment response or durability of disease comparing sirolimus to vincristine. Our results support individualized treatment decision plans depending on clinical scenario and patient/physician preferences. Response criteria and response rates reported here will be useful for guiding future treatment protocols for vascular tumors.


Subject(s)
Hemangioendothelioma , Hemangioma , Kasabach-Merritt Syndrome , Sarcoma, Kaposi , Skin Neoplasms , Vascular Neoplasms , Child , Humans , Kasabach-Merritt Syndrome/drug therapy , Kasabach-Merritt Syndrome/pathology , Vincristine , Prospective Studies , Hemangioendothelioma/drug therapy , Hemangioendothelioma/pathology , Sarcoma, Kaposi/pathology , Sirolimus/therapeutic use
2.
Pathogens ; 12(1)2023 Jan 03.
Article in English | MEDLINE | ID: mdl-36678428

ABSTRACT

Despite increasing reports of tick-borne diseases in Africa, remarkably, reports of tick-borne relapsing fever (TBRF) in Nigeria are lacking. Ornithodoros savignyi from Nigeria have been reported with the relapsing fever Candidatus Borrelia kalaharica. Conversely, in Ethiopia, the agent of relapsing fever is the louse-borne relapsing fever (LBRF) spirochaete Borrelia recurrentis with no TBRF reported to occur. A total of 389 Ornithodoros ticks, Ethiopia (N = 312) and Nigeria (N = 77), were sampled, together with 350 cattle, and 200 goat sera were collected from Nigeria. Samples were screened for Borrelia spp. by RT-PCR. Reactive samples were confirmed, then sequenced using flagellin B, 16S rRNA, and 16S-23S intergenic spacer region. The prevalence of Borrelia spp. in livestock was 3.8% (21/550) and 14% (3/21) after final molecular confirmation. Of 312 ticks from Ethiopia, 3.5% (11/312) were positive for Borrelia, with 36% (4/11) by conventional PCR. Sequencing revealed that the borreliae in soft ticks was C. B. kalaharica, whilst that found in animals was Borrelia theileri. Soft ticks were confirmed by sequencing 7% (22/312) and 12% (9/77) of the Ethiopian and Nigerian ticks, respectively. Phylogenetic analysis revealed that these were Ornithodoros savignyi. This is the first evidence of C. B. kalaharica in Ethiopia and demonstrates the co-existence of TBRF in a country endemic to LBRF. Important, this might cause a diagnostic challenge given that LBRF is predominantly diagnosed by microscopy, which cannot differentiate these two spirochaetes. Furthermore, we report B. theileri in ruminants in Nigeria, which may also be of veterinary and economic importance.

3.
Front Cell Infect Microbiol ; 12: 983770, 2022.
Article in English | MEDLINE | ID: mdl-36204641

ABSTRACT

Louse-borne relapsing fever (LBRF) caused by B. recurrentis is a poverty-related and neglected infectious disease with an endemic focus in the Horn of Africa. Re-emergence of the disease occurred in Europe during the refugee crisis in 2015 and sporadic outbreaks were frequently reported in Eastern Africa where poor settings lack affordable diagnostics. Currently, there are no validated in vitro assays available for the serodiagnosis of LBRF. The aim of this study was to develop novel and reliable immunoassays by investigating clinically suspected and culture-confirmed serum samples from LBRF patients and a broad panel of serum samples from patients with other spirochetal, bacterial, and parasitic diseases. We identified two immunoreactive antigens (complement-inhibiting protein CihC and the glycerophosphodiester phosphodiesterase GlpQ of B. recurrentis) as the most promising target candidates leading to the evaluation of two immunoassays (line immunoblot and ELISA) for IgM and IgG. To optimize the IgM immunoassay, we conducted a bioinformatic approach to localize the relevant immunogenic regions within CihC. By utilizing a N-terminal CihC fragment, the sensitivity and specificity of both immunoassays (CihC and GlpQ) were high (IgM: sensitivity 100%, specificity of 89.9%, IgG: sensitivity 100%, specificity 99.2%). In conclusion, our findings indicate the diagnostic potential of CihC and GlpQ as valuable markers for the serodiagnosis of LBRF even at early time points of infection. Here, we provide strong evidence for the utilization of these immunoassays as reliable tools in clinical practice.


Subject(s)
Borrelia , Relapsing Fever , Humans , Immunoglobulin G , Immunoglobulin M , Relapsing Fever/diagnosis , Relapsing Fever/microbiology , Serologic Tests
4.
Ticks Tick Borne Dis ; 12(1): 101607, 2021 01.
Article in English | MEDLINE | ID: mdl-33220628

ABSTRACT

Over recent years, a multitude of pathogens have been reported to be tick-borne. Given this, it is unsurprising that these might co-exist within the same tick, however our understanding of the interactions of these agents both within the tick and vertebrate host remains poorly defined. Despite the rich diversity of ticks, relatively few regularly feed on humans, 12 belonging to argasid and 20 ixodid species, and literature on co-infection is only available for a few of these species. The interplay of various pathogen combinations upon the vertebrate host and tick vector represents a current knowledge gap. The impact of co-infection in humans further extends into diagnostic challenges arising when multiple pathogens are encountered and we have little current data upon which to make therapeutic recommendations for those with multiple infections. Despite these short-comings, there is now increasing recognition of co-infections and current research efforts are providing valuable insights into dynamics of pathogen interactions whether they facilitate or antagonise each other. Much of this existing data is focussed upon simultaneous infection, however the consequences of sequential infection also need to be addressed. To this end, it is timely to review current understanding and highlight those areas still to address.


Subject(s)
Coinfection/epidemiology , Tick-Borne Diseases/epidemiology , Ticks , Animals , Coinfection/microbiology , Coinfection/parasitology , Coinfection/virology , Humans , Prevalence , Tick-Borne Diseases/microbiology , Tick-Borne Diseases/parasitology , Tick-Borne Diseases/virology , Ticks/microbiology , Ticks/parasitology , Ticks/virology
5.
Parasit Vectors ; 12(1): 599, 2019 Dec 21.
Article in English | MEDLINE | ID: mdl-31864403

ABSTRACT

Anaplasma phagocytophilum is the agent of tick-borne fever, equine, canine and human granulocytic anaplasmosis. The common route of A. phagocytophilum transmission is through a tick bite, the main vector in Europe being Ixodes ricinus. Despite the apparently ubiquitous presence of the pathogen A. phagocytophilum in ticks and various wild and domestic animals from Europe, up to date published clinical cases of human granulocytic anaplasmosis (HGA) remain rare compared to the worldwide status. It is unclear if this reflects the epidemiological dynamics of the human infection in Europe or if the disease is underdiagnosed or underreported. Epidemiologic studies in Europe have suggested an increased occupational risk of infection for forestry workers, hunters, veterinarians, and farmers with a tick-bite history and living in endemic areas. Although the overall genetic diversity of A. phagocytophilum in Europe is higher than in the USA, the strains responsible for the human infections are related on both continents. However, the study of the genetic variability and assessment of the difference of pathogenicity and infectivity between strains to various hosts has been insufficiently explored to date. Most of the European HGA cases presented as a mild infection, common clinical signs being pyrexia, headache, myalgia and arthralgia. The diagnosis of HGA in the USA was recommended to be based on clinical signs and the patient's history and later confirmed using specialized laboratory tests. However, in Europe since the majority of cases are presenting as mild infection, laboratory tests may be performed before the treatment in order to avoid antibiotic overuse. The drug of choice for HGA is doxycycline and because of potential for serious complication the treatment should be instituted on clinical suspicion alone.


Subject(s)
Anaplasma phagocytophilum/drug effects , Anaplasmosis/drug therapy , Anti-Bacterial Agents/administration & dosage , Anaplasma phagocytophilum/classification , Anaplasma phagocytophilum/genetics , Anaplasma phagocytophilum/isolation & purification , Anaplasmosis/epidemiology , Anaplasmosis/microbiology , Anaplasmosis/transmission , Animals , Europe/epidemiology , Horses , Humans , Ixodes/parasitology , Ixodes/physiology
6.
J Clin Microbiol ; 56(9)2018 09.
Article in English | MEDLINE | ID: mdl-29950331

ABSTRACT

Endemic tick-borne relapsing fever (TBRF) has not been documented in Nigeria, yet clinically compatible cases have been described, and soft tick species are endemic in surrounding countries. Consequently, our aim was to investigate if TBRF-associated Borrelia is present in Nigeria. To address this, we examined 49 soft tick pools to identify the tick species and to screen for Borrelia The tick species was revealed by 16S rRNA gene amplification and Sanger sequencing to be Ornithodoros savignyi, an aggressive, multihost, rapidly feeding species with significant veterinary impact. We detected a Borrelia organism in 3 of 49 pooled samples (6%). Molecular analysis of amplified 16S rRNA and flagellin genes and intragenic spacer fragments disclosed that this Borrelia organism was synonymous with the recently described organism "Candidatus Borrelia kalaharica," identified in a tourist returning to Germany from South Africa. Given the widespread endemic range of this tick vector, TBRF should be considered part of the differential diagnosis for patients with fever returning from arid areas of Africa and further afield.


Subject(s)
Arachnid Vectors/classification , Arachnid Vectors/microbiology , Borrelia/classification , Borrelia/isolation & purification , Ornithodoros/classification , Ornithodoros/microbiology , Phylogeny , Animals , Arachnid Vectors/genetics , Borrelia/genetics , DNA, Ribosomal Spacer/genetics , Flagellin/genetics , Nigeria/epidemiology , Ornithodoros/genetics , RNA, Ribosomal, 16S/genetics , Relapsing Fever/microbiology , Sequence Analysis, DNA
7.
Microbiol Spectr ; 6(2)2018 04.
Article in English | MEDLINE | ID: mdl-29651977

ABSTRACT

This article will provide current insights into antimicrobial susceptibilities and resistance of an important group of bacterial pathogens that are not phylogenetically related but share lifestyle similarities in that they are generally considered to be obligate intracellular microbes. As such, there are shared challenges regarding methods for their detection and subsequent clinical management. Similarly, from the laboratory perspective, susceptibility testing is rarely undertaken, though molecular approaches might provide new insights. One should also bear in mind that the highly specialized microbial lifestyle restricts the opportunity for lateral gene transfer and, consequently, acquisition of resistance.


Subject(s)
Chlamydiales/physiology , Coxiella/physiology , Drug Resistance, Bacterial/physiology , Rickettsia/physiology , Animal Diseases/microbiology , Animals , Anti-Bacterial Agents/pharmacology , Bacteriological Techniques/methods , Cell Culture Techniques/methods , Chlamydiales/drug effects , Chlamydiales/pathogenicity , Coxiella/drug effects , Coxiella/pathogenicity , Cytoplasm/microbiology , Gene Transfer, Horizontal , Humans , Microbial Sensitivity Tests/methods , Rickettsia/drug effects , Rickettsia/pathogenicity , Zoonoses/microbiology
9.
Vector Borne Zoonotic Dis ; 17(1): 33-41, 2017 01.
Article in English | MEDLINE | ID: mdl-28055578

ABSTRACT

Coxiella burnetii is a globally distributed zoonotic γ-proteobacterium with an obligatory intracellular lifestyle. It is the causative agent of Q fever in humans and of coxiellosis among ruminants, although the agent is also detected in ticks, birds, and various other mammalian species. Requirements for intracellular multiplication together with the necessity for biosafety level 3 facilities restrict the cultivation of C. burnetii to specialized laboratories. Development of a novel medium formulation enabling axenic growth of C. burnetii has facilitated fundamental genetic studies. This review provides critical insights into direct diagnostic methods currently available for C. burnetii. It encompasses molecular detection methods, isolation, and propagation of the bacteria and its genetic characterization. Differentiation of C. burnetii from Coxiella-like organisms is an essential diagnostic prerequisite, particularly when handling and analyzing ticks.


Subject(s)
Coxiella burnetii/isolation & purification , Q Fever/diagnosis , Animals , Bacteriological Techniques/methods , Coxiella burnetii/genetics , Genome, Bacterial , Humans , Q Fever/microbiology , Real-Time Polymerase Chain Reaction
10.
Vector Borne Zoonotic Dis ; 17(1): 2-11, 2017 01.
Article in English | MEDLINE | ID: mdl-28055580

ABSTRACT

Borrelia species fall into two groups, the Borrelia burgdorferi sensu lato (Bbsl) complex, the cause of Lyme borreliosis (also known as Lyme disease), and the relapsing fever group. Both groups exhibit inter- and intraspecies diversity and thus have variations in both clinical presentation and diagnostic approaches. A further layer of complexity is derived from the fact that ticks may carry multiple infectious agents and are able to transmit them to the host during blood feeding, with potential overlapping clinical manifestations. Besides this, pathogens like Borrelia have developed strategies to evade the host immune system, which allows them to persist within the host, including humans. Diagnostics can be applied at different times during the clinical course and utilize sample types, each with their own advantages and limitations. These differing methods should always be considered in conjunction with potential exposure and compatible clinical features. Throughout this review, we aim to explore different approaches providing the reader with an overview of methods appropriate for various situations. This review will cover human pathogenic members of Bbsl and relapsing fever borreliae, including newly recognized Borrelia miyamotoi spirochetes.


Subject(s)
Borrelia/classification , Lyme Disease/diagnosis , Relapsing Fever/diagnosis , Animals , Arthropod Vectors/microbiology , Borrelia/isolation & purification , Humans , Ticks/microbiology
11.
Mol Cell Probes ; 31: 22-27, 2017 02.
Article in English | MEDLINE | ID: mdl-27523487

ABSTRACT

Lyme borreliosis (or Lyme disease) has become a virtual household term to the exclusion of other forgotten, emerging or re-emerging borreliae. We review current knowledge regarding these other borreliae, exploring their ecology, epidemiology and pathological potential, for example, for the newly described B. mayonii. These bacteria range from tick-borne, relapsing fever-inducing strains detected in some soft ticks, such as B. mvumii, to those from bat ticks resembling B. turicatae. Some of these emerging pathogens remain unnamed, such as the borrelial strains found in South African penguins and some African cattle ticks. Others, such as B. microti and unnamed Iranian strains, have not been recognised through a lack of discriminatory diagnostic methods. Technical improvements in phylogenetic methods have allowed the differentiation of B. merionesi from other borrelial species that co-circulate in the same region. Furthermore, we discuss members that challenge the existing dogma that Lyme disease-inducing strains are transmitted by hard ticks, whilst the relapsing fever-inducing spirochaetes are transmitted by soft ticks. Controversially, the genus has now been split with Lyme disease-associated members being transferred to Borreliella, whilst the relapsing fever species retain the Borrelia genus name. It took some 60 years for the correlation with clinical presentations now known as Lyme borreliosis to be attributed to their spirochaetal cause. Many of the borreliae discussed here are currently considered exotic curiosities, whilst others, such as B. miyamotoi, are emerging as significant causes of morbidity. To elucidate their role as potential pathogenic agents, we first need to recognise their presence through suitable diagnostic approaches.


Subject(s)
Borrelia/physiology , Lyme Disease/microbiology , Animals , Borrelia/classification , Humans , Relapsing Fever/virology
12.
Clin Lab Med ; 35(4): 847-65, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26593261

ABSTRACT

Relapsing fever borreliae were notorious and feared infectious agents that earned their place in history through their devastating impact as causes of both epidemic and endemic infection. They are now considered more as an oddity, and their burden of infection is largely overshadowed by other infections such as malaria, which presents in a similar clinical way. Despite this, they remain the most common bacterial infection in some developing countries. Transmitted by soft ticks or lice, these fascinating spirochetes have evolved a myriad of mechanisms to survive within their diverse environments.


Subject(s)
Borrelia/physiology , Relapsing Fever/microbiology , Animals , Borrelia/classification , Borrelia/growth & development , Ecology , Humans , Prognosis , Relapsing Fever/diagnosis , Relapsing Fever/drug therapy , Relapsing Fever/transmission
13.
Vector Borne Zoonotic Dis ; 14(10): 693-702, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25325312

ABSTRACT

Tick-borne spotted fever group (SFG) rickettsioses are emerging human diseases caused by obligate intracellular Gram-negative bacteria of the genus Rickettsia. Despite being important causes of systemic febrile illnesses in travelers returning from sub-Saharan Africa, little is known about the reservoir hosts of these pathogens. We conducted surveys for rickettsiae in domestic animals and ticks in a rural setting in western Kenya. Of the 100 serum specimens tested from each species of domestic ruminant 43% of goats, 23% of sheep, and 1% of cattle had immunoglobulin G (IgG) antibodies to the SFG rickettsiae. None of these sera were positive for IgG against typhus group rickettsiae. We detected Rickettsia africae-genotype DNA in 92.6% of adult Amblyomma variegatum ticks collected from domestic ruminants, but found no evidence of the pathogen in blood specimens from cattle, goats, or sheep. Sequencing of a subset of 21 rickettsia-positive ticks revealed R. africae variants in 95.2% (20/21) of ticks tested. Our findings show a high prevalence of R. africae variants in A. variegatum ticks in western Kenya, which may represent a low disease risk for humans. This may provide a possible explanation for the lack of African tick-bite fever cases among febrile patients in Kenya.


Subject(s)
Antibodies, Bacterial/blood , Arachnid Vectors/microbiology , Ixodidae/microbiology , Rickettsia Infections/veterinary , Rickettsia/immunology , Tick-Borne Diseases/veterinary , Animals , Animals, Domestic , Bacterial Outer Membrane Proteins/genetics , Base Sequence , Cattle , DNA Primers/genetics , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , Dogs , Female , Goats , Humans , Kenya/epidemiology , Male , Molecular Sequence Data , Rickettsia/genetics , Rickettsia/isolation & purification , Rickettsia Infections/epidemiology , Rickettsia Infections/microbiology , Rural Health , Sequence Analysis, DNA/veterinary , Seroepidemiologic Studies , Sheep , Tick-Borne Diseases/epidemiology , Tick-Borne Diseases/microbiology , Zoonoses
14.
Am J Trop Med Hyg ; 89(6): 1095-1102, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24080637

ABSTRACT

Leptospirosis is a widespread but under-reported cause of morbidity and mortality. Global re-emergence of leptospirosis has been associated with the growth of informal urban settlements in which rodents are thought to be important reservoir hosts. Understanding the multi-host epidemiology of leptospirosis is essential to control and prevent disease. A cross-sectional survey of rodents in the Kibera settlement in Nairobi, Kenya was conducted in September-October 2008 to demonstrate the presence of pathogenic leptospires. A real-time quantitative polymerase chain reaction showed that 41 (18.3%) of 224 rodents carried pathogenic leptospires in their kidneys, and sequence data identified Leptospira interrogans and L. kirschneri in this population. Rodents of the genus Mus (37 of 185) were significantly more likely to be positive than those of the genus Rattus (4 of 39; odds ratio = 15.03). Questionnaire data showed frequent contact between humans and rodents in Kibera. This study emphasizes the need to quantify the public health impacts of this neglected disease at this and other urban sites in Africa.


Subject(s)
Leptospira interrogans/isolation & purification , Leptospirosis/veterinary , Rodent Diseases/epidemiology , Animals , Cross-Sectional Studies , DNA, Bacterial/genetics , Disease Reservoirs , Female , Humans , Kenya/epidemiology , Leptospira/genetics , Leptospira/isolation & purification , Leptospira interrogans/genetics , Leptospirosis/epidemiology , Leptospirosis/microbiology , Male , Mice , Multivariate Analysis , Phylogeny , Rats , Real-Time Polymerase Chain Reaction , Rodent Diseases/microbiology , Rodentia , Surveys and Questionnaires , Urban Health
15.
Vector Borne Zoonotic Dis ; 13(10): 775-7, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23808979

ABSTRACT

The hematophagous soft tick Ornithodoros erraticus feeds nocturnally on multiple warm-blooded vertebrate hosts. This tick is often found living buried in the soil of traditional pigpens. O. erraticus is an important infectious disease vector both for humans and animals. In the Iberian Peninsula, this tick serves as the vector of human tick-borne relapsing fever caused by the spirochete Borrelia hispanica. The natural ecosystems maintaining this spirochete are not well understood, with details of competent vertebrate reservoirs and tick-host interactions poorly understood. Investigation of arthropod blood meal composition provides evidence linking the vector to specific hosts, providing insights into possible disease reservoirs. Ticks collected from two pigpens located in southern Portugal were subjected to blood meal analysis. PCR amplification of vertebrate cytochrome b was used to disclose the original host from which 349 ticks had derived their previous blood meal. Host origins for blood meal analysis from 79 of 349 ticks revealed that 46.8% had previously fed from pigs, 35.4% human, 13.9% bovine, 5.1% sheep, 1.3% rodent, and 1.3% from birds. Three samples revealed mixed blood meals, namely, human-pig (1.3%), sheep-pig (1.3%), and bovine-pig (1.3%). The major role of pigs as hosts is consistent with fieldwork observations and underlines the importance of pigs for maintaining O. erraticus tick populations. Humans serve as accidental hosts, frequently confirmed by reports from both producers and veterinarians. Other livestock species and wildlife prevalent in the region appear only to have a minor role in maintaining this tick. The results demonstrate the importance of blood meal analysis to determine tick hosts providing a tool for investigation of sylvatic cycle for Borrelia hispanica.


Subject(s)
Arachnid Vectors/genetics , Borrelia/physiology , Ornithodoros/genetics , Relapsing Fever/transmission , Tick Infestations/parasitology , Animals , Arachnid Vectors/classification , Arachnid Vectors/microbiology , Cattle , Disease Reservoirs , Humans , Muridae , Ornithodoros/classification , Ornithodoros/microbiology , Passeriformes , Portugal/epidemiology , Sensitivity and Specificity , Sequence Analysis, DNA , Sheep , Swine
16.
PLoS Negl Trop Dis ; 7(1): e2042, 2013.
Article in English | MEDLINE | ID: mdl-23390560

ABSTRACT

BACKGROUND: In Africa, relapsing fever borreliae are neglected arthropod-borne pathogens causing mild to deadly septicemia and miscarriage. The closely related Borrelia crocidurae, Borrelia duttonii, Borrelia recurrentis and Borrelia hispanica are rarely diagnosed at the species level, hampering refined epidemiological and clinical knowledge of the relapsing fevers. It would be hugely beneficial to have simultaneous detection and identification of Borrelia to species level directly from clinical samples. METHODOLOGY/PRINCIPAL FINDINGS: We designed a multiplex real-time PCR protocol targeting the 16S rRNA gene detecting all four Borrelia, the glpQ gene specifically detecting B. crocidurae, the recN gene specifically detecting B. duttonii/B. recurrentis and the recC gene specifically detecting B. hispanica. Compared to combined 16S rRNA gene and flaB gene sequencing as the gold standard, multiplex real-time PCR analyses of 171 Borrelia-positive and 101 Borrelia-negative control blood specimens yielded 100% sensitivity and specificity for B. duttonii/B. recurrentis and B. hispanica and 99% sensitivity and specificity for B. crocidurae. CONCLUSIONS/SIGNIFICANCE: The multiplex real-time PCR developed in this study is a rapid technique for both molecular detection and speciation of relapsing fever borreliae from blood in Africa. It could be incorporated in point-of-care laboratory to confirm diagnosis and provide evidence of the burden of infection attributed to different species of known or potentially novel relapsing fever borreliae.


Subject(s)
Borrelia/isolation & purification , Molecular Diagnostic Techniques/methods , Multiplex Polymerase Chain Reaction/methods , Real-Time Polymerase Chain Reaction/methods , Relapsing Fever/diagnosis , Africa , Bacteriological Techniques/methods , Blood/microbiology , Borrelia/classification , Borrelia/genetics , Humans , Sensitivity and Specificity , Time Factors
17.
Am J Trop Med Hyg ; 88(3): 513-518, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23382156

ABSTRACT

We conducted serological surveys for Coxiella burnetii in archived sera from patients that visited a rural clinic in western Kenya from 2007 to 2008 and in cattle, sheep, and goats from the same area in 2009. We also conducted serological and polymerase chain reaction-based surveillance for the pathogen in 2009-2010, in human patients with acute lower respiratory illness, in ruminants following parturition, and in ticks collected from ruminants and domestic dogs. Antibodies against C. burnetii were detected in 30.9% (N = 246) of archived patient sera and in 28.3% (N = 463) of cattle, 32.0% (N = 378) of goats, and 18.2% (N = 159) of sheep surveyed. Four of 135 (3%) patients with acute lower respiratory illness showed seroconversion to C. burnetii. The pathogen was detected by polymerase chain reaction in specimens collected from three of six small ruminants that gave birth within the preceding 24 hours, and in five of 10 pools (50%) of Haemaphysalis leachi ticks collected from domestic dogs.


Subject(s)
Cattle Diseases/epidemiology , Coxiella burnetii/isolation & purification , Goat Diseases/epidemiology , Q Fever/veterinary , Sheep Diseases/epidemiology , Ticks/microbiology , Animals , Cattle , Cattle Diseases/microbiology , Goat Diseases/microbiology , Goats , Humans , Kenya/epidemiology , Q Fever/epidemiology , Q Fever/microbiology , Seroepidemiologic Studies , Sheep , Sheep Diseases/microbiology
18.
Ticks Tick Borne Dis ; 3(5-6): 338-45, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23140898

ABSTRACT

Ethiopian soft ticks Argas persicus, hard ticks including both Amblyomma variegatum and Rhipicephalus (Boophilus) spp., and fleas were collected from livestock, traditional human dwellings, and cracks and crevices of trees. They were assessed in pools for the presence of Rickettsia using PCR-based methods. The extracted tick DNA was subjected to molecular screening for Rickettsia, which revealed 50.5% of the pooled samples to be positive for Rickettsia spp. These were then subjected to multi-gene analysis using both outer surface proteins and housekeeping genes with proven discriminatory potential. Sequencing of the citrate synthase and outer membrane genes clearly led to the identification of three distinct rickettsial species, Candidatus Rickettsia hoogstraalii in Argas persicus ticks; R. africae in hard tick pools, and R. felis in fleas. Furthermore, we demonstrated the presence of the plasmid-borne small heat-shock protein gene hsp2 in DNA from A. persicus ticks suggesting that Candidatus R. hoogstraalii carried by these ticks possess a plasmid. Unlike chromosomal gene sequences, the hsp2 gene failed to cluster with Candidatus R. hoogstraalii, instead falling into an isolated separate clade, suggesting a different origin for the plasmid.


Subject(s)
Argas/microbiology , Rickettsia/classification , Rickettsia/isolation & purification , Animals , Bacterial Outer Membrane Proteins/genetics , Citrate (si)-Synthase/genetics , Cluster Analysis , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , Heat-Shock Proteins/genetics , Humans , Livestock/parasitology , Molecular Sequence Data , Phylogeny , Plasmids , Polymerase Chain Reaction , Sequence Analysis, DNA , Trees/parasitology
19.
Adv Exp Med Biol ; 984: 381-96, 2012.
Article in English | MEDLINE | ID: mdl-22711642

ABSTRACT

Although we live in the age of genomics and the availability of complete genome sequences of Coxiella burnetii has increased our understanding of the genomic diversity of the agent, it is still somewhat a "query" microorganism. The epidemiology of Q fever is complex due to the worldwide distribution, reservoir and vector diversity, and a lack of studies defining the dynamic interaction between these factors. In addition Coxiella is an agent that could be used as a bioterror weapon. Therefore, typing methods that can discriminate strains and be used to trace back infections to their source are of paramount importance. In this chapter we provide an overview of historical and current typing methods and describe their advantages and limitations. Recently developed techniques such as MLVA and SNP typing have shown promise and improved the discrimination capacity and utility of genotyping methods for molecular epidemiologic studies of this challenging pathogen.


Subject(s)
Coxiella burnetii/classification , DNA, Bacterial/genetics , Molecular Typing/methods , Q Fever/microbiology , Animals , Coxiella burnetii/genetics , Genotype , Humans , Q Fever/epidemiology
20.
PLoS Negl Trop Dis ; 6(6): e1652, 2012.
Article in English | MEDLINE | ID: mdl-22679518

ABSTRACT

BACKGROUND: In Africa, relapsing fevers are neglected arthropod-borne infections caused by closely related Borrelia species. They cause mild to deadly undifferentiated fever particularly severe in pregnant women. Lack of a tool to genotype these Borrelia organisms limits knowledge regarding their reservoirs and their epidemiology. METHODOLOGY/PRINCIPAL FINDINGS: Genome sequence analysis of Borrelia crocidurae, Borrelia duttonii and Borrelia recurrentis yielded 5 intergenic spacers scattered between 10 chromosomal genes that were incorporated into a multispacer sequence typing (MST) approach. Sequencing these spacers directly from human blood specimens previously found to be infected by B. recurrentis (30 specimens), B. duttonii (17 specimens) and B. crocidurae (13 specimens) resolved these 60 strains and the 3 type strains into 13 species-specific spacer types in the presence of negative controls. B. crocidurae comprised of 8 spacer types, B. duttonii of 3 spacer types and B. recurrentis of 2 spacer types. CONCLUSIONS/SIGNIFICANCE: Phylogenetic analyses of MST data suggested that B. duttonii, B. crocidurae and B. recurrentis are variants of a unique ancestral Borrelia species. MST proved to be a suitable approach for identifying and genotyping relapsing fever borreliae in Africa. It could be applied to both vectors and clinical specimens.


Subject(s)
Borrelia/classification , Borrelia/genetics , DNA Fingerprinting/methods , Genetic Variation , Molecular Typing/methods , Relapsing Fever/microbiology , Africa , Borrelia/isolation & purification , Cluster Analysis , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Intergenic , Female , Genotype , Humans , Molecular Sequence Data , Phylogeny , Pregnancy , Sequence Analysis, DNA
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