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1.
Sci Rep ; 14(1): 16854, 2024 Jul 22.
Article in English | MEDLINE | ID: mdl-39039150

ABSTRACT

The utilization of drag-reducing polymers has long been hindered by their irritancy, corrosiveness, and toxicity across various domains. In this investigation, we explored sodium alginate, a natural drag reducer, for its efficacy in reducing drag and its resilience to shear in millimeter-scale pipelines. Initially, an experimental setup was devised to assess the drag reduction capabilities of sodium alginate at varying concentrations and flow rates using Response Surface Methodology (RSM). The relationship between drag reduction (DR), concentration (C), and flow rate (Q) was established by analyzing the experimental data. Subsequently, variance analysis was employed to validate the data accuracy, with a comparison between predicted and experimental DR values revealing an error margin within ± 20%. Analysis of cyclic shear testing of sodium alginate solution in tubes demonstrated its effectiveness as a shear flow drag reducer. Furthermore, results from laser particle size analysis indicated minimal molecular breakage of sodium alginate during cyclic shear.

2.
Opt Express ; 32(12): 20931-20947, 2024 Jun 03.
Article in English | MEDLINE | ID: mdl-38859461

ABSTRACT

In recent decades, rapid advances in astronomical imaging campaigns have generated an urgent need for detailed spectroscopic surveys with increased speed and efficiency. The 6.5 m MUltiplexed Survey Telescope (MUST) aims to address these current demands. The performance of the multi-object fiber-fed spectrograph (MOFS) plays a critical role for spectroscopic survey telescopes, directly influencing the realization of scientific aims. In this paper, we demonstrate a high-resolution and highly-multiplexed option for MOFS of MUST. The system is believed to be first to apply a 92 mm × 92 mm large-size detector in a Schmidt-like camera and reduces the average central obscuration to 14%. Thanks to the F/1.25 camera design with excellent image quality, the spectrograph achieves up to 800 150µm-large-core optical fibers integration. It can obtain the broadband spectral information (395 nm-435 nm, 520 nm-570 nm, 610 nm-680 nm) of 800 objects with a high resolution of >16,000 within one exposure. The spectrograph theory, design method, and final system scheme of the MOFS can offer good reference and guidance for the spectrograph design in the spectroscopic survey.

3.
Sci Rep ; 14(1): 12340, 2024 05 29.
Article in English | MEDLINE | ID: mdl-38811679

ABSTRACT

Auricularia heimuer, the third most frequently cultivated edible mushroom species worldwide, has high medicinal value. However, a shortage of molecular marker hinders the efficiency and accuracy of genetic breeding efforts for A. heimuer. High-throughput transcriptome sequencing data are essential for gene discovery and molecular markers development. This study aimed to clarify the distribution of SSR loci across the A. heimuer transcriptome and to develop highly informative EST-SSR markers. These tools can be used for phylogenetic analysis, functional gene mining, and molecular marker-assisted breeding of A. heimuer. This study used Illumina high-throughput sequencing technology to obtain A. heimuer transcriptome data. The results revealed 37,538 unigenes in the A. heimuer transcriptome. Of these unigenes, 24,777 (66.01%) were annotated via comparison with the COG, Pfam, and NR databases. Overall, 2510 SSRs were identified from the unigenes, including 6 types of SSRs. The most abundant type of repeats were trinucleotides (1425, 56.77%), followed by mononucleotides (391, 15.58%) and dinucleotides (456, 18.17%). Primer pairs for 102 SSR loci were randomly designed for validity confirmation and polymorphism identification; this process yielded 53 polymorphic EST-SSR markers. Finally, 13 pairs of highly polymorphic EST-SSR primers were used to analyze the genetic diversity and population structure of 52 wild A. heimuer germplasms, revealing that the 52 germplasms could be divided into three categories. These results indicated that SSR loci were abundant in types, numbers, and frequencies, providing a potential basis for germplasm resource identification, genetic diversity analysis, and molecular marker-assisted breeding of A. heimuer.


Subject(s)
Expressed Sequence Tags , Gene Expression Profiling , Microsatellite Repeats , Transcriptome , Microsatellite Repeats/genetics , Gene Expression Profiling/methods , Transcriptome/genetics , Genetic Markers , Agaricales/genetics , Agaricales/classification , High-Throughput Nucleotide Sequencing , Basidiomycota/genetics , Polymorphism, Genetic , Molecular Sequence Annotation , Phylogeny
4.
Genes (Basel) ; 15(2)2024 01 26.
Article in English | MEDLINE | ID: mdl-38397150

ABSTRACT

The capability of embryogenic callus induction is a prerequisite for in vitro plant regeneration. However, embryogenic callus induction is strongly genotype-dependent, thus hindering the development of in vitro plant genetic engineering technology. In this study, to examine the genetic variation in embryogenic callus induction rate (CIR) in peanut (Arachis hypogaea L.) at the seventh, eighth, and ninth subcultures (T7, T8, and T9, respectively), we performed genome-wide association studies (GWAS) for CIR in a population of 353 peanut accessions. The coefficient of variation of CIR among the genotypes was high in the T7, T8, and T9 subcultures (33.06%, 34.18%, and 35.54%, respectively), and the average CIR ranged from 1.58 to 1.66. A total of 53 significant single-nucleotide polymorphisms (SNPs) were detected (based on the threshold value -log10(p) = 4.5). Among these SNPs, SNPB03-83801701 showed high phenotypic variance and neared a gene that encodes a peroxisomal ABC transporter 1. SNPA05-94095749, representing a nonsynonymous mutation, was located in the Arahy.MIX90M locus (encoding an auxin response factor 19 protein) at T8, which was associated with callus formation. These results provide guidance for future elucidation of the regulatory mechanism of embryogenic callus induction in peanut.


Subject(s)
Arachis , Genome-Wide Association Study , Arachis/genetics , Polymorphism, Single Nucleotide , Genotype , Genetic Engineering
5.
Sci Rep ; 13(1): 22433, 2023 Dec 17.
Article in English | MEDLINE | ID: mdl-38104226

ABSTRACT

In this study, we investigated the drag reduction property of a premixed slurry drag reducer in a millimeter-scale pipe. The aim of this study is to establish the correlation between Darcy friction factor and drag reducer concentration (C) and volume flow (Q). First, the experimental plan was designed by using the response surface method (RSM), and then the experimental data were processed to establish the quadratic correlation between the response variable and the description variable. After that, ANOVA analysis of variance was used to verify the accuracy of the experimental data and the correlation. Finally, the prediction model is extended to a larger concentration and volume flow range, and it is found that the accuracy between the predicted value of friction coefficient and the experimental value is ± 30%, thus verifying that the correlation is suitable for the small-scale fully turbulent region. Compared with traditional experimental design and correlation methods, the implementation of Response Surface Methodology (RSM) in this study not only reduces the experimental time but also yields a more robust correlation for predicting the friction coefficient.

8.
Front Cell Infect Microbiol ; 13: 1136588, 2023.
Article in English | MEDLINE | ID: mdl-37009509

ABSTRACT

Background: Community-acquired pneumonia (CAP) is an extraordinarily heterogeneous illness, both in the range of responsible pathogens and the host response. Metagenomic next-generation sequencing (mNGS) is a promising technology for pathogen detection. However, the clinical application of mNGS for pathogen detection remains challenging. Methods: A total of 205 patients with CAP admitted to the intensive care unit were recruited, and broncho alveolar lavage fluids (BALFs) from 83 patients, sputum samples from 33 cases, and blood from 89 cases were collected for pathogen detection by mNGS. At the same time, multiple samples of each patient were tested by culture. The diagnostic performance was compared between mNGS and culture for pathogen detection. Results: The positive rate of pathogen detection by mNGS in BALF and sputum samples was 89.2% and 97.0%, which was significantly higher (P < 0.001) than that (67.4%) of blood samples. The positive rate of mNGS was significantly higher than that of culture (81.0% vs. 56.1%, P = 1.052e-07). A group of pathogens including Mycobacterium abscessus, Chlamydia psittaci, Pneumocystis jirovecii, Orientia tsutsugamushi, and all viruses were only detected by mNGS. Based on mNGS results, Escherichia coli was the most common pathogen (15/61, 24.59%) of non-severe patients with CAP, and Mycobacterium tuberculosis was the most common pathogen (21/144, 14.58%) leading to severe pneumonia. Pneumocystis jirovecii was the most common pathogen (26.09%) in severe CAP patients with an immunocompromised status, which was all detected by mNGS only. Conclusion: mNGS has higher overall sensitivity for pathogen detection than culture, BALF, and sputum mNGS are more sensitive than blood mNGS. mNGS is a necessary supplement of conventional microbiological tests for the pathogen detection of pulmonary infection.


Subject(s)
Community-Acquired Infections , Pneumonia , Humans , Pneumonia/diagnosis , High-Throughput Nucleotide Sequencing , Bronchoalveolar Lavage Fluid , Community-Acquired Infections/diagnosis , Dietary Supplements , Escherichia coli , Metagenomics , Sensitivity and Specificity
9.
Front Nutr ; 10: 1131542, 2023.
Article in English | MEDLINE | ID: mdl-36875843

ABSTRACT

Introduction: Natural melanin from Auricularia heimuer have numerous beneficial biological properties, which were used as a safe and healthy colorant in several industries. Methods: In this study, single-factor experiments, Box-Behnken design (BBD), and response surface methodology (RSM) were employed to investigate the effects of alkali-soluble pH, acid precipitation pH, and microwave time on the extraction yield of Auricularia heimuer melanin (AHM) from fermentation. Ultraviolet-visible spectrum (UV-Vis), Fourier transform infrared (FT-IR) spectroscopy, scanning electron microscope (SEM), and high-performance liquid chromatography (HPLC) were used to analyze the extracted AHM. The solubility, stability, and antioxidant activities of AHM were also measured. Results: The results showed that alkali-soluble pH, acid precipitation pH, and microwave time significantly affected the AHM yield, with the following optimized microwave-assisted extraction conditions: alkali-soluble pH of 12.3, acid precipitation pH of 3.1, and microwave time of 53 min, resulting in an AHM extraction yield of 0.4042%. AHM exhibited a strong absorption at 210 nm, similar to melanin from other sources. FT-IR spectroscopy also revealed that AHM exhibited the three characteristic absorption peaks of natural melanin. The HPLC chromatogram profile of AHM showed a single symmetrical elution peak with a 2.435 min retention time. AHM was highly soluble in alkali solution, insoluble in distilled water and organic solvents, and demonstrated strong DPPH, OH, and ABTS free radical scavenging activities. Discussion: This study provides technical support to optimize AHM extraction for use in the medical and food industries.

10.
ACS Appl Mater Interfaces ; 15(10): 13307-13318, 2023 Mar 15.
Article in English | MEDLINE | ID: mdl-36880523

ABSTRACT

Silver nanowires (AgNWs) are important materials for flexible transparent electrodes (FTEs). However, the loose stacking of nanowire junctions greatly affects the electric conductivity across adjacent nanowires. Soldering can effectively reduce the wire-wire contact resistance of AgNWs by epitaxially depositing nanosolders at the junctions, but the process normally needs to be performed with high energy consumption. In this work, we proposed a simple room-temperature method to achieve precise welding of junctions by adjusting the wettability of the soldered precursor solution on the surfaces of AgNWs. The nanoscale welding at nanowire cross junctions forms efficient conductive networks. Furthermore, reduced graphene oxide (rGO) was used to improve the stability of FTEs by wrapping the rGO around the AgNW surface. The obtained FTE shows a figure-of-merit (FoM) of up to 439.3 (6.5 Ω/sq at a transmittance of 88%) and has significant bending stability and environmental and acidic stability. A flexible transparent heater was successfully constructed, which could reach up to 160 °C within a short response time (43 s) and exhibit excellent switching stability. When laminating this FTE onto half perovskite solar cells as the top electrodes, the obtained double-side devices achieved power conversion efficiencies as high as 16.15% and 13.91% from each side, pointing out a convenient method for fabricating double-sided photovoltaic devices.

11.
ACS Omega ; 7(21): 18063-18072, 2022 May 31.
Article in English | MEDLINE | ID: mdl-35664570

ABSTRACT

Open hole combined with a sand filter pipe is the main development mode of an unconsolidated sandstone horizontal well, which causes problems such as shaft wall collapse, sand filter pipe blockage, and even damage. At present, the polyurethane intelligent sand control screen pipe can effectively solve these problems, but its application scope is limited by the downhole temperature and material strength. Therefore, the high-strength shape memory polyphenylene sulfide (SMPPPS) was synthesized by an indoor experiment, then the shape memory performance was analyzed, and the variation law of pore size with composition and processing technology was obtained. Finally, the performance of the SMPPPS intelligent screen was evaluated. It is found that (1) with the increase of the cross-linking agent content, the melt index and melt peak temperature of SMPPPS decrease rapidly at first and then remain unchanged; the cross-linking agent content is set at 4.5 wt %. (2) The shape memory performance of SMPPPS is good, and the recovery ratio can reach 99.8% at 110 °C in 11.8 min. (3) The relationship between the pore size distribution proportion of SMPPPS and the foaming agent content, pore enhancer content, temperature, and pressure is determined through experiments; the main distribution range of pore size increases with the increase of the foaming agent content and temperature and decreases with the increase of the pore enhancer content and pressure. When the foaming agent content is 0.5 wt %, the pore enhancer concentration is 10 wt %, the molding temperature is 320 °C, the molding pressure is 10 MPa, and the main distribution range of pore size is 80-320 µm. (4) The permeability of recovery SMPPPS with a compression ratio of 300% first increases slightly and then decreases slightly with the increase of flow, with a variation range of 420.5-463 mD; the compressive strength range is 9.5-11.4 MPa; the SMPPPS has good adaptability to downhole fluid; the sand retaining accuracy is higher than that of the screen sand filter pipe, but the blockage is more serious.

12.
Environ Pollut ; 304: 119193, 2022 Jul 01.
Article in English | MEDLINE | ID: mdl-35337887

ABSTRACT

Trace elements contamination is mainly originated from industrial emission, sewage irrigation and pesticides, and poses a threat to the environment and human health. This study analyzed the trace element pollutants in peanut-soil systems, the enrichment and translocation capacity of peanut to trace elements, and the potential risk of trace elements to environment and human health. The results indicated that Cd and Ni in peanut kernels exceeded the standard limits in 2019, and the exceeding rate were 9% and 31%, respectively. Cd in 8% of soil samples and As in 98% of soil samples exceeded the risk screening value of trace elements. The concentration of trace elements in peanuts was related to varieties and planting regions. In addition, there was a significant positive correlation between the concentration of Cd in peanut kernel and its concentration in soil. Compared with other trace elements, peanut kernels had stronger ability to enrich and transport Cd, Cu, and Zn, the BFs were 0.45, 0.51 and 0.47, respectively. After oil extraction, trace elements were mainly concentrated in peanut meal, and only 0.25% of Cd was in oil. The RI of trace elements was less than 150, indicating that the study area was under low degree of ecological risk. However, As and Cd might pose moderate risk to environment. Trace elements in soil and peanut could not cause non-carcinogenic and carcinogenic risks to human, but the HI and CR value of As (0.59 and 9.54 × 10-5) in soil and CRing value of Cd (9.25 × 10-7) in peanut were close to the critical value. We conclude that Cd pollution in peanut kernel, and Cd and As pollution in soil should be monitored to enter into the food chain or environment and to avoid the possible health hazards and environment risks.


Subject(s)
Metals, Heavy , Soil Pollutants , Trace Elements , Arachis , Cadmium , China , Environmental Monitoring , Humans , Metals, Heavy/analysis , Risk Assessment , Soil , Soil Pollutants/analysis , Trace Elements/analysis
13.
Life Sci ; 294: 120383, 2022 Apr 01.
Article in English | MEDLINE | ID: mdl-35143827

ABSTRACT

AIMS: Small molecule compound tyrphostin A9 (A9), an inhibitor of platelet-derived growth factor (PDGF) receptor, was previously reported by our group to stimulate extracellular signal-regulated kinase 1 (ERK1) and 2 (ERK2) in neuronal cells in a PDGF receptor-irrelevant manner. The study aimed to investigate whether A9 could protect axons in experimental autoimmune encephalomyelitis through activation of ERKs. MAIN METHODS: A9 treatment on the protection on neurite outgrowth in SH-SY5Y neuroblastoma cells and primary substantia nigra neuron cultures from the neurotoxin MPP+ were analyzed. Then, clinical symptoms as well as ERK1/2 activation, axonal protection induction, and the abundance increases of the regeneration biomarker GAP-43 in the CNS in the relapsing-remitting experimental autoimmune encephalomyelitis (EAE) model were verified. KEY FINDINGS: A9 treatment could stimulate neurite outgrowth in SH-SY5Y neuroblastoma cells and protect primary substantia nigra neuron cultures from the neurotoxin MPP+. In the relapsing-remitting EAE model, oral administration of A9 successfully ameliorated clinical symptoms, activated ERK1/2, induced axonal protection, and increased the abundance of the regeneration biomarker GAP-43 in the CNS. Interestingly, gene deficiency of ERK1 or ERK2 disrupted the beneficial effects of A9 in MOG-35-55-induced EAE. SIGNIFICANCE: These results demonstrated that small molecule compounds that stimulate persistent ERK activation in vitro and in vivo may be useful in protective or restorative treatment for neurodegenerative diseases.


Subject(s)
Axons/drug effects , Disease Models, Animal , Encephalomyelitis, Autoimmune, Experimental/prevention & control , Extracellular Signal-Regulated MAP Kinases/metabolism , Gene Expression Regulation/drug effects , Neuroblastoma/drug therapy , Tyrphostins/pharmacology , Animals , Encephalomyelitis, Autoimmune, Experimental/etiology , Encephalomyelitis, Autoimmune, Experimental/metabolism , Encephalomyelitis, Autoimmune, Experimental/pathology , Extracellular Signal-Regulated MAP Kinases/genetics , Female , Humans , Mice , Mice, Inbred C57BL , Neuroblastoma/metabolism , Neuroblastoma/pathology , Rats , Rats, Sprague-Dawley
14.
Water Sci Technol ; 85(2): 549-561, 2022 Jan.
Article in English | MEDLINE | ID: mdl-35100138

ABSTRACT

A large pool of ammonia in mature leachate is challenging to treat with a membrane bioreactor system to meet the discharge Standard for Pollution Control on the Landfill Site of Municipal Solid Waste in China (GB 16889-2008) without external carbon source addition. In this study, an engineering leachate treatment project with a scale of 2,000 m3/d was operated to evaluate the ammonia heat extraction system (AHES), which contains preheat, decomposition, steam-stripping, ammonia recovery, and centrifuge dewatering. The operation results showed that NH3-N concentrations of raw leachate and treated effluent from an ammonia heat extraction system (AHES) were 1,305-2,485 mg/L and 207-541 mg/L, respectively. The ratio of COD/NH3-N increased from 1.40-1.84 to 7.69-28.00. Nitrogen was recovered in the form of NH4HCO3 by the ammonia recovery tower with the introduction of CO2, wherein the mature leachate can offer 37% CO2 consumption. The unit consumptions of steam and power were 8.0% and 2.66 kWh/m3 respectively, and the total operation cost of AHES was 2.06 USD per cubic metre of leachate. These results confirm that heat extraction is an efficient and cost-effective technology for the recovery of nitrogen resource from mature leachate.


Subject(s)
Nitrogen , Water Pollutants, Chemical , Bioreactors , Hot Temperature , Solid Waste
15.
J Phys Chem Lett ; 12(30): 7201-7206, 2021 Aug 05.
Article in English | MEDLINE | ID: mdl-34310148

ABSTRACT

A physicochemical understanding of the mechanism of turbulent flow drag reduction with polymer and its degradation is of great interest from both science and industry perspectives. Although the correlation based on the Fourier series has been proposed to predict the drag reduction and its degradation, its physical meaning was not clear until now. This letter aims to clarify this issue. We develop a comprehensive model to predict the drag reduction and degradation of polymers in turbulent flow from a chemical thermodynamics and kinetics viewpoint. We demonstrate that the Fourier series employed to predict the drag reduction and its degradation is due to the viscoelastic property of drag-reducing polymer solution, and the phase angle in the model, in physical nature, represents the hysteresis of the polymer in turbulent flow. Besides, our new insight of drag reduction with flexible polymers can also explain why a maximum drag reduction in rotational flow appears before degradation happens.

16.
Membranes (Basel) ; 11(2)2021 Feb 08.
Article in English | MEDLINE | ID: mdl-33567617

ABSTRACT

In this paper, the transport phenomena in four common membrane distillation (MD) configurations and three popular modelling approaches are introduced. The mechanism of heat transfer on the feed side of all configurations are the same but are distinctive from each other from the membrane interface to the bulk permeate in each configuration. Based on the features of MD configurations, the mechanisms of mass and heat transfers for four configurations are reviewed together from the bulk feed to the membrane interface on the permeate but reviewed separately from the interface to the bulk permeate. Since the temperature polarisation coefficient cannot be used to quantify the driving force polarisation in Sweeping Gas MD and Vacuum MD, the rate of driving force polarisation is proposed in this paper. The three popular modelling approaches introduced are modelling by conventional methods, computational fluid dynamics (CFD) and response surface methodology (RSM), which are based on classic transport mechanism, computer science and mathematical statistics, respectively. The default assumptions, area for applications, advantages and disadvantages of those modelling approaches are summarised. Assessment and comparison were also conducted based on the review. Since there are only a couple of full-scale plants operating worldwide, the modelling of operational cost of MD was only briefly reviewed. Gaps and future studies were also proposed based on the current research trends, such as the emergence of new membranes, which possess the characteristics of selectivity, anti-wetting, multilayer and incorporation of inorganic particles.

17.
Chemosphere ; 275: 130006, 2021 Jul.
Article in English | MEDLINE | ID: mdl-33639548

ABSTRACT

The vital functions of extracellular polymeric substances (EPS) have been well recognized in bioleaching of sulfide ores. However, no report is available about the role of EPS in bioleaching of spent catalyst. To completely and deeply understand the functions of EPS in bioleaching of spent catalyst, the generation behavior of EPS at various pulp densities during bioleaching was characterized by three-dimensional excitation-emission matrix (3DEEM), and its relevance with bioleaching performance and process parameters were analyzed using mathematical means. The results showed that the EPS contain humus-like substances as main component (>70%) and protein-like substances as minor component (<30%). Both total EPS and humus-like substances mainly keep growing over the whole duration of bioleaching at low pulp density of 5.0% or lower; whereas total EPS and humus-like fraction keep declining at high pulp density of 7.5% or higher. Among the total EPS and its components, humus-like substances only have a positive significant correlation with bioleaching efficiencies of both Co and Mo and affect bioleaching process more greatly due to greater correlation coefficient. Biofilm appears at the spent catalyst surface under 2.5% of pulp density mediated by EPS while no biofilm occurs at 10% of pulp density due to shortage of EPS, accounting for the great difference in bioleaching efficiencies between high and low pulp densities which are 48.3% for Mo and 50.0% for Co at 10% of pulp density as well as 75.9% for Mo and 78.8% for Co at 2.5% of pulp density, respectively.


Subject(s)
Extracellular Polymeric Substance Matrix , Petroleum , Biofilms , Catalysis , Metals
18.
ACS Omega ; 5(26): 15931-15935, 2020 Jul 07.
Article in English | MEDLINE | ID: mdl-32656413

ABSTRACT

Drag reduction performance was studied with a rotating disk instrument in the laboratory, and experiments show that there is an initial rapid growth stage and stability stage for drag reduction ratio change. The higher the rotational speed, the larger the initial drag reduction ratio is; the larger the concentration, the shorter the drag reduction stabilization time is. Under high concentration and high speed, the drag reduction onset time is short. Because of the shear degradation, the Reynolds number should be taken into account during use. Through a comparison of diesel properties after adding agents with national standard, it is confirmed that drag reduction agents could be used in this pipeline.

19.
Int Immunopharmacol ; 85: 106512, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32454418

ABSTRACT

Clonorchis sinensis could induce inflammation, epithelial hyperplasia and fibrosis in the intrahepatic bile duct as a food-borne parasite, which was associated with the development of cholangiocarcinoma (CCA). Praziquantel was the most effective drug on treatment of this kind of parasite. However, new drugs with minimal toxicity to the host were urgently needed due to the side effects of Praziquantel and its CCA risk. In this study, helminth mitochondria respiratory chain blocker Wortmannilatone F (WF) and IL-8 analogue CXCL8 (3-72) K11R/G31P were used to treat BALB/C mice infected by Clonorchis sinensis. We investigated the gross and histopathological morphology of the liver, inflammation-associated cytokine IL-6, lipid peroxidation-related proteins cyclooxygenase-2 (COX-2) and 5-lipoxygenase (5-LOX), collagen fiber accumulation and fibroblast-specific protein 1 (FSP1), malignant markers proliferating cell nuclear antigen (PCNA) and cytokeratin 19 (CK19), as well as the disinfection effect on these parasites in vitro. WF inhibited and killed the worms dramatically, and the combination of WF with G31P improved the condition of the hepatobiliary duct tissue greatly. These outcomes indicated that the combination of WF and G31P was a potential therapeutic method to treat the Clonorchis sinensis infection.


Subject(s)
Anthelmintics/therapeutic use , Clonorchiasis/drug therapy , Interleukin-8/therapeutic use , Macrolides/therapeutic use , Peptide Fragments/therapeutic use , Animals , Anthelmintics/pharmacology , Arachidonate 5-Lipoxygenase/metabolism , Clonorchiasis/metabolism , Clonorchiasis/parasitology , Clonorchiasis/pathology , Clonorchis sinensis/drug effects , Collagen/metabolism , Cyclooxygenase 2/metabolism , Interleukin-6/blood , Interleukin-8/pharmacology , Keratin-19/metabolism , Liver/drug effects , Liver/metabolism , Liver/pathology , Macrolides/pharmacology , Male , Mice, Inbred BALB C , Peptide Fragments/pharmacology , Proliferating Cell Nuclear Antigen/metabolism , S100 Calcium-Binding Protein A4/metabolism
20.
BMC Genomics ; 21(1): 357, 2020 May 12.
Article in English | MEDLINE | ID: mdl-32398006

ABSTRACT

BACKGROUND: Fusarium ear rot (FER) caused by Fusarium verticillioides is a major disease of maize that reduces grain yield and quality globally. However, there have been few reports of major loci for FER were verified and cloned. RESULT: To gain a comprehensive understanding of the genetic basis of natural variation in FER resistance, a recombinant inbred lines (RIL) population and one panel of inbred lines were used to map quantitative trait loci (QTL) for resistance. As a result, a total of 10 QTL were identified by linkage mapping under four environments, which were located on six chromosomes and explained 1.0-7.1% of the phenotypic variation. Epistatic mapping detected four pairs of QTL that showed significant epistasis effects, explaining 2.1-3.0% of the phenotypic variation. Additionally, 18 single nucleotide polymorphisms (SNPs) were identified across the whole genome by genome-wide association study (GWAS) under five environments. Compared linkage and association mapping revealed five common intervals located on chromosomes 3, 4, and 5 associated with FER resistance, four of which were verified in different near-isogenic lines (NILs) populations. GWAS identified three candidate genes in these consistent intervals, which belonged to the Glutaredoxin protein family, actin-depolymerizing factors (ADFs), and AMP-binding proteins. In addition, two verified FER QTL regions were found consistent with Fusarium cob rot (FCR) and Fusarium seed rot (FSR). CONCLUSIONS: These results revealed that multi pathways were involved in FER resistance, which was a complex trait that was controlled by multiple genes with minor effects, and provided important QTL and genes, which could be used in molecular breeding for resistance.


Subject(s)
Chromosome Mapping/methods , Disease Resistance/genetics , Fusarium/pathogenicity , Genome-Wide Association Study , Quantitative Trait Loci , Zea mays/genetics , Actin Depolymerizing Factors/genetics , Chromosomes, Plant , Phenotype , Plant Diseases/genetics , Plant Diseases/microbiology , Plant Proteins/genetics , Polymorphism, Single Nucleotide , Zea mays/microbiology
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